mRNA_A-nodosum_M_contig919.15.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 448 bits (1153), Expect = 6.460e-134 Identity = 256/553 (46.29%), Postives = 340/553 (61.48%), Query Frame = 3
Query: 327 PHVTTRKPAAALALLLTKQLQFLSMLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNVTEDRCSAGIESSYMGPMVYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVSTEEMEYRISTGR----------GPSSGSGLLPAWRSLGEISEREAKSGGGEDEGVLAMTTVATDQEVSPLTVCRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPLLLFVAVWRTIVVRVHPDALLVFKRFISVRGANG-----IQGFCLRFKSSWRRGSSMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLANSAINAVAMFLAVLNTVSTALLGTSALKWEGTPMEAEVYQAVFILQLTALIVLAIPVYLDLATTVWRTILIKWKKFLSRETEMVETAEETRKSRKYIRSYIRRKWCYALCVMLRHNVFACARDIYNGLRKAYV-------PSKPIERNR 1919
PH + R+P+A LA +L QLQFL+ LSLVDY+ +S LADFV GLRW+NLWW E +N+ D C+ +S +G +V++GNL LV IL + +HV +S VEALWLT+ RA+ ++ AARRRG E++ R+ GR PS + P E E+EG + + ++ +SP+ CR+ S S WLH+PHVEL+ LFFAFEGAV+S S I+ S C E Y A+ ++ YPLL+FV V+RT++VRV P+ LL+FK + G NG G RFKSSW S+FSWADKGQWETV T D V R+GDWFRIGFEPVFVDYTK GTWFI+ISLVE A A V V++++SV+QL L G+ ++MF IL+ +P ANS IN + + ++ +S + SAL WEGT A + +V +LQL +L L IPVYLD T V I + +K L + E +E R++R YIRSY RR+WC C MLRHNVFACARD G+RK P P++R++
Sbjct: 1185 PHASNRRPSATLAFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWPAEVGQNIASDECAFEAGASGIGALVFVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIR-NSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAE-DGTNGDAPSRAGGLLSRFKSSWAENYSLFSWADKGQWETVQTP-DRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRKALGKTGH--ELTDEEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRKPRFTTAARSGPYPPLDRSK 1732
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 442 bits (1136), Expect = 2.590e-130 Identity = 251/547 (45.89%), Postives = 341/547 (62.34%), Query Frame = 3
Query: 327 PHVTTRKPAAALALLLTKQLQFLSMLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNVTEDRCSAGIESSYMGPMVYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVSTEEMEYRISTGRG-PSSGSGLLPA--WRSLGEISEREAKSGGGEDEGVLAMTTVATDQEVSPLTVCRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPLLLFVAVWRTIVVRVHPDALLVFKRF----ISVRGANGIQGFCLRFKSSWRRGSSMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLANSAINAVAMFLAVLNTVSTALLGTSALKWEGTPMEAEVYQAVFILQLTALIVLAIPVYLDLATTVWRTILIKWKKFLSRETEMVETAEETRKSRKYIRSYIRRKWCYALCVMLRHNVFACARDIYNGLRKAYV-------PSKPIERNRSP 1925
P V+ R+P+A LA +L QLQFL+MLSLVDY+ + S LADFVVGLRW+NLWW + ++ D C +S +G +V++GNL LV IL + +HV V+S EALWLT+ RA+ ++ ARRR E+ R GR + GL + S R+ E+EG + + ++ +SP+ +CR+ S S WLH+PHVEL+ LFFAFEGAV+S S I+ S C E Y A+ ++ YPLL+F V RT+ VRV PD LL+FK + + NG GF RFKSSW S+FSWADKGQWETV T ++ R+GDWFRIGFEPVFVDYTK GTWFI+ISLVE A +A V V++D+S +QL L G+ + MF IL+ +P ANS IN + + ++ V T LL +ALKWEGT +V AV +LQ+ +L L IPVYLD T V I + +K L + + + E+ ++R YIR++ RR+WC C MLRHNVFACARD +G+RK ++ P P++++ P
Sbjct: 1414 PRVSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPADIGEDIASDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNPSLVRDGSQRTDEEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIR-NSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQTPN-RNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQL--TGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRKPHLLTAARSGPYPPLDKSIGP 1956
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 439 bits (1128), Expect = 2.940e-129 Identity = 252/548 (45.99%), Postives = 340/548 (62.04%), Query Frame = 3
Query: 333 VTTRKPAAALALLLTKQLQFLSMLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNVTEDRCSAGIESSYMGPMVYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVSTEEMEYRISTGR-----GPSSGSGLLPAWRSLGEISEREAKSGGGEDEGVLAMTTVATDQEVSPLTVCRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPLLLFVAVWRTIVVRVHPDALLVFKRFISVRGANGIQ-----GFCLRFKSSWRRGSSMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLANSAINAVAMFLAVLNTVSTALLGTSALKWEGTPMEAEVYQAVFILQLTALIVLAIPVYLDLATTVWRTILIKWKKFLSRETEMVETAEETRKSRKYIRSYIRRKWCYALCVMLRHNVFACARDIYNGLRKAYV-------PSKPIERNRSP 1925
V+ R+P+A LA +L QLQFL+MLSLVDY+ + S LADFVVGLRW+NLWW E ++ D C +S +G +V++GNL LV IL + +HV V+S EALWLT+ RA+ ++ ARRR E+ R GR P R+ + +R ++ E+EG + + ++ ++SP+ CR+ S S WLH+PHVEL+ LFFAFEGAV+S S I+ S C E Y A+ ++ YPLL+F V RT+ VRV PD LL+FK + G NG GF FKSSW S+FSWADKGQWETV T ++ R+GDWFRIGFEPVFVDYTK GTWFI+ISLVE A +A V V++D+S +QL L G+ + MF IL+ +P ANS IN + + ++ VST LL +ALKWEGT +V AV +LQ+ +L L IPVYLD T V I + +K L + T + E+ ++R YIR++ RR+WC C MLRHNVFACARD G+RK ++ P P++++ P
Sbjct: 1375 VSHRRPSATLAFVLMTQLQFLAMLSLVDYVVSQGSWLADFVVGLRWINLWWPAEIGEDIVSDGCIFETGASEIGALVFVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNPSLVRDRSQRT--DEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIR-NSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTY-DEDGTNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPN-RNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRKALGK-TGQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRKPHLLTAARSGPYPPLDKSIGP 1916
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 375 bits (963), Expect = 1.330e-114 Identity = 225/554 (40.61%), Postives = 317/554 (57.22%), Query Frame = 3
Query: 327 PHVTTRKPAAALALLLTKQLQFLSMLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNVTEDRCSAGIESSYMGPMVYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVSTEEMEYRISTGR----------GPSSGSGLLP-AWRSLGEISEREAKSGGGEDEGVLAMTTVATDQEVSPLTVCRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPLLLFVAVWRTIVVRVHPDALLVFKRFISVRGANG-----IQGFCLRFKSSWRRGSSMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLANSAINAVAMFLAVLNTVSTALLGTSALKWEGTPMEAEVYQAVFILQLTALIVLAIPVYLDLATTVWRTILIKWKKFLSRETEMVETAEETRKSRKYIRSYIRRKWCYALCVMLRHNVFACARDIYNGLRKAYV-------PSKPIERNR 1919
P + R+P+A L +L QLQFL+ LSLVDY+ +S LADFV GLRW+NLWW E +N+ D + +S + +V++GN+ LV IL + +HV +S VEALWLT+ A+ ++ AARRRG E++ R+ R PS S P A +L ++E E+ E+EG + ++ ++P+ CR+ S S WLH+PHVEL+ FFAFEGAV+S S I+ C + Y A+ ++ PLL+FV V+RT++VRV P+ LL+FK + G +G GF RFKSSW S+FSWADK QWET T D + R+GDW RIGFEPVFV+YTK GTWFI+ISLVE +A V V+V++S++QL L G+ +++F IL+ +P ANS N + + ++ +S + SAL WEGT A + +V +LQL +L +E R++R YIRSY RR+WC C +L HNVFACARD G+RK P P++R++
Sbjct: 205 PPASNRRPSATLTFVLMTQLQFLATLSLVDYVMDEDSWLADFVTGLRWINLWWLAEVGQNIASDESAFEAGASGIRALVFVGNVALVKGILLAIFFIHVAAVSGVEALWLTKKPARENLDAARRRGAPIGELQARLRGVRIICRTNPDLADPSPFSRQAPHASGTLSTLNEEESDMS-DEEEGGRGRVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIR-NYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAE-GGTSGDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTP-DRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLF------------------------------------DEEREARDYIRSYTRRQWCGTWCTVLGHNVFACARDTSEGVRKPRFTTAARSGPYPPLDRSK 718
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 320 bits (821), Expect = 2.870e-95 Identity = 207/546 (37.91%), Postives = 306/546 (56.04%), Query Frame = 3
Query: 327 PHVTTRKPAAALALLLTKQLQFLSMLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNVT---------EDRCSAGIE---SSYMGPMVYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVSTEEM----EYRISTGRGPSSGSGLLPAWRSLGEISEREAKSGGGEDEGV-LAMTTVATDQEVSPLTV----CRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPLLLFVAVWRTIVVRVHPDALLVFKRFISVRGANGIQG-----FCLRFKSSWRRGSSMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLANSAINAVAMFLAVLNTVSTALLGTSALKWEGTPMEAEVYQAVFILQLTALIVLAIPVYLDLATTVWRTILIKWKKFLSRET-EMVETAEETRKSRKYIRSYIRRKWCYALCVMLRHNVFACARDIYNGLRK 1883
PHV+ R P+ +A+LL Q+QFL+ LSLVD +SLL++ LRWVNLW R + + + GIE +S +G +V+LGN+ L S+L G++V+H+V++SAVEA WL++ RA + A+RRG+ + R++ S L A S RE + D GV + L CR +S S+WL++PH+ELL L FAFEGA++SQ++ ++ C Y A +L+ YP+L+ + +RT VRV PD L+VFK + +G G F + ++ + SMF+WA+ G WETV T D + +R+GD FRIGFEP+FVD+TK +WF + L+E+ G+AC +V+VDDSV+QLFL G+ ++ F +L+ RP ANS IN + L +++ S A+L +A +W+ T + AV +LQL AL+ L IP+Y+D +T + I K + T + T EE ++ RK+IR YI R W C ML NV AC D G R+
Sbjct: 41 PHVSVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTFSSGGERLFQQDGSRACGIEPTSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIRGLGARRASRVAHSPDAESDPDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMR-GGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKP-VGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETP-DEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTRR 583
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 292 bits (747), Expect = 1.230e-83 Identity = 197/544 (36.21%), Postives = 293/544 (53.86%), Query Frame = 3
Query: 336 TTRKPAAALALLLTKQLQFLSMLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNVT--------------EDRCSAGIE---SSYMGPMVYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVSTEEMEYRIST--GRGPSSGSGLLPAWRSLGEIS-----EREAKS--GGGE---DEGVLAMTTVATDQEVSPLTVCRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPLLLFVAVWRTIVVRVHPDALLVFKRFISVRGANGIQGFCLRFKSSWRRGSSMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLANSAINAVAMFLAVLNTVSTALLGTSALKWEGTPMEAEVYQAVFILQLTALIVLAIPVYLDLATTVWRTILIKWKKFLSRETEMVETAEETRKSRKYIRSYIRRKWCYALCVMLRHNVFACARDIYNGLR 1880
T R P+A +A +LT Q+QFL+ LS VD S +D LRWVNLW F+ + +D + I +S +G ++++GNL L +L + HV+V S VEA W+ + RA+ ++ + RRG+S E+ +S + P+ G +S G + ER+A S GG+ DE + ++ CR+ S S WLHYPH+EL+ LFFAFEGAV+SQ++ ++ ++N LY A+ TL+ YPLL+ V V RT V V PDAL+VF + G R S + S+FSWADKGQWETV T+ D R DWFRIGFEP+F D+T+AG+WFI+ +L+E A +A ++V+VD+S +Q L + ++ F +L+ +P ANS +NAVA + + + V +L +A + GT A + AV ++Q + VL IP+Y+D A +++ I + RE E R R+ + R W A M+ N+FAC RD G+R
Sbjct: 140 TCRSPSATMAFVLTSQIQFLATLSFVDTTGAEESAFSDLTNNLRWVNLWPSESFSEGIASRIISDEPDQPSDEDDTTPSAISQTVTSNVGSLLFMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQPTMDDGSSAGSQSSGIMQSPQRMERQAVSPYDGGDSKSDEEEGGPRNTRPGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALR-SANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDK-ARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNRKGSVDERENEA------DRAEREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIR 675
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 288 bits (737), Expect = 1.760e-78 Identity = 219/608 (36.02%), Postives = 294/608 (48.36%), Query Frame = 3
Query: 354 AALALLLTKQLQFLSMLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNV--TEDR-----------------CSAGIESSYMGPMVYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVS-------------------TEEMEYRISTG----------------RGPS------SGSGL----LPA--------------W----------RSLGEISEREAKSGGGEDEGVLAMTTVATDQEVSPLTVCRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPLLLFVAVWRTIVVRVHPDALLVF--KRFISVRGANG---------IQGFCLRFKSSWRRGSSMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLANSAINAVAMFLAVLNTVSTALLGTSALKWEGTPMEAEVYQAVFILQLTALIVLAIPVYLDLATTVWRTILIKWKKFLSRETEMVETAEETRKSRKYIRSYIRRKWCYALCVMLRHNVFACARDIYNGLR 1880
A L + QLQFL+ LSLVD +S L F RW NLW FA T D CS +G +V++GN LV L + ++HV ++S VEA WL + RAK A ARR GVS E + R S G R PS +GS LPA W RS +S + E G L T A + +SP+ CR+ S S WLH+PHVEL+ LFFA+EGAV+SQVS ++ A C + A L L+FYP+L+FVAV RT VRV P+ L+VF K G G F + ++ W S+F+WA+KG WET T + R+G WFRIGFEP+FVD+TK+G WF+ +LVE A + C+ ++D+SVLQL L + + F +L+ RP ANS INA+ L ++ V ALL SA +WEGT +V V +LQL AL L IP+Y+D + + I + +K + + V T E + ++R +IRR W C ML N+FACA D G+R
Sbjct: 758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXGCSWDGSLGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQAPVPEPDARPSGGTTDISVASSFRRRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSRKVRDGSWVAEDGEKKEARSDDNLSGTDCSDYDEEGGGGLGTLTRA-ESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREA-GCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNE-GTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDL-FVRHFIRRSWPRTWCTMLGKNIFACASDTREGIR 1361
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 271 bits (693), Expect = 1.900e-72 Identity = 202/565 (35.75%), Postives = 294/565 (52.04%), Query Frame = 3
Query: 342 RKPAAALALLLTKQLQFLSMLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNVT------------EDRCSA---------------GIESSYMGPM---VYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVSTEEMEYRISTGRGPSSGSGLLPAWRSLGEISEREAKSGGGEDEGVL-------AMTTVATDQEVSPLTVCRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPLLLFVAVWRTIVVRVHPDALLVF--KRFISVRGANGIQGFCLRFKSSWRRGS----SMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLANSAINAVAMFLAVLNTVSTALLGTSALKWEGTPMEAEVYQAVFILQLTALIVLAIPVYLDLATTVWRTILIKWKKFLSRETEMVETAEETRKSRKYIRSYIRRKWCYALCVMLRHNVFACARDIYNGLRKAYVPSKPI 1907
R+P+ +A++ QLQFL+ LSLV T +S L DF LRW+NLW FAR+ T ED G+E+ G + V++GNL+L IL + ++H+ V S +EA WL + A+ HVA A+RRGV E+ R+S P + S + S R AK+ G+DEG M ++S + CR++S S+WLH+PHVEL+ L FAFEGAV++QVS I+ + + A+L LLF+P+L+ V T ++ +VF +V + + F S RRG SMF+W++KG+WE+V T + D R DWFRIGFEP+FVD+T AG+WF + +L+EL A V V+VD+SVLQL L + F +L+ +P AN IN + + ++ A+L +A KW GT ++V V I+QL L + IP+Y+D A + +I K + RE + ++ E RKYIR YI W C M+R NV A ++ G Y PS +
Sbjct: 2182 RRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEESGDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRELSARLSNPWAPFDPN-------SESQRSLRTAKTS-GDDEGEADDTDAEEGMPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLIL-AVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESDLYTSVRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDK-RARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTLAAIIIPLYVDTAFMMVGSIRDKLRGV--REDDHIDADE-----RKYIRRYIWGAWAPIFCTMIRKNVLAFLKETSAG----YSPSVKV 2725
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 255 bits (652), Expect = 2.570e-67 Identity = 187/556 (33.63%), Postives = 274/556 (49.28%), Query Frame = 3
Query: 336 TTRKPAAALALLLTKQLQFLSMLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNVTE---------------------DRCSAGIE---SSYMGPMVYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVSTEEMEYRISTGRGPSSGSGL----LPAWRSLGEISEREAKSGGGEDEGVLAMTTVATDQEVSPLTVCRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPL-----------LLFVAVWRTIVVRVHPDALLVFKRFISVRGANGIQGFCLRFKSSWRRGSSMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLANSAINAVAMFLAVLNTVSTALLGTSALKWEGTPMEAEVYQAVFILQLTALIVLAIPVYLDLATTVWRTILIKWKKFLSRETEMVETAEET--RKSRKYIRSYIRRKWCYALCVMLRHNVFACARDIYNGLR 1880
T R P++ +AL+LT Q+QFL+ LS VD S L+ LRWVNLW F+ V D GI S +G +++GNL L + VH+++ SAVEA WL + RA+N + A +ST S R S + LP+W S G + A T + ++ CR+ S S WLHYPH+EL+ LFFAFEGAV+SQVS ++ S+ F Y A+ TL L +LF R VRV DAL+VF + G+ G + + ++ SS+F+WADKG W TV T+ D D RD DWFRIGFEP++ D+T+AG+WF + +L+E A +AC++V+VD+S +Q L + ++ F +L+ +P ANS +N + + + + V +L SA + T + V + Q + VL +P+Y+D T+L+ W +R V+T + R R++I R W M+ NVFAC RD G+R
Sbjct: 96 TFRNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGEDDDSEEDGDSTQRGISWTVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLSTSGSSTAWSGTRAIQSPQLMEHQALPSWDSTGRNDSTNVQE--------AARTNTRAGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVF-YAAVATLTGCNLSRIATMSILGFILFDVRGR---VRVRSDALIVFTSNKTDEGSTGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTA-DEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVD-------TLLLVWGAIRNRRGP-VKTRDNAAQRAEREFINRRTLRLWGRTWFNMVGSNVFACVRDTREGIR 630
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI) HSP 1 Score: 230 bits (587), Expect = 3.110e-64 Identity = 146/384 (38.02%), Postives = 210/384 (54.69%), Query Frame = 3
Query: 462 LRWVNLWWQPEFARNVT------EDRCSAGIES------------------SYMGPMVYLGNLLLVGSILTGVLVVHVVVISAVEALWLTRSRAKNHVAAARRRGVSTEEMEYRI--------------STGRGPSSGSGLLPAWRSLGEISEREAKSGGGE-DEGVLAMTTVATDQEVSPLTVCRDKSHSIWLHYPHVELLVLFFAFEGAVSSQVSVIKVASNCDEFLYPALLTLLFYPLLLFVAVWRTIVVRVHPDALLVFKRFISVRGANGIQGFCLRFKSSWRRGSSMFSWADKGQWETVTTSGDLDVIRDGDWFRIGFEPVFVDYTKAGTWFILISLVELAGVACVSVIVDDSVLQLFLLSGIGAIMFAILLRQRPLAN 1496
+RWVNLW F+ V E +AG + S +G +++GNL L L + +H++V SA+EA WL + RA+N V A R VST E + S GR +SG+ P +S ++ GG +E T + ++ CR+ S S WLHYPH+EL+ L FAFEGAV+SQVS ++ S+ F Y A+ TL+FYP+L+ V RT VRV DAL+VF S G+ G + + R+ SS+F+WADKGQWETV T+ D D R+ DWFRIGFEP+F D+T+AG+WFI+ +L+E A +AC++V+VD++ +Q L I ++ F +L+ +P AN
Sbjct: 6 IRWVNLWPSQSFSEGVASRVLSNEPESTAGEDGDSEEDGDATQRGISWTVISDVGSFLFMGNLALFAGFLLTIFSLHILVASAIEAYWLAKQRARNEVPRALRGDVSTSEFPTALLGTRPQQKNLDDGWSAGR-QTSGTIQSPQLMEHQAVSSWDSTGGGDSTNEQKRGRTNTRAGSSIGQVSQCRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVF-YAAVATLVFYPVLMVAMVVRTHRVRVRSDALIVFTSNESDEGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQTT-DEDARRNADWFRIGFEPLFADFTQAGSWFIVYTLIEWAVLACIAVLVDNTAVQCGLFCAIHSMTFILLVACKPFAN 386 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig919.15.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig919.15.2 >prot_A-nodosum_M_contig919.15.2 ID=prot_A-nodosum_M_contig919.15.2|Name=mRNA_A-nodosum_M_contig919.15.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=512bp MLSLVDYISTGNSLLADFVVGLRWVNLWWQPEFARNVTEDRCSAGIESSYback to top mRNA from alignment at A-nodosum_M_contig919:262060..267868- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig919.15.2 ID=mRNA_A-nodosum_M_contig919.15.2|Name=mRNA_A-nodosum_M_contig919.15.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5809bp|location=Sequence derived from alignment at A-nodosum_M_contig919:262060..267868- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig919:262060..267868- >mRNA_A-nodosum_M_contig919.15.2 ID=mRNA_A-nodosum_M_contig919.15.2|Name=mRNA_A-nodosum_M_contig919.15.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1536bp|location=Sequence derived from alignment at A-nodosum_M_contig919:262060..267868- (Ascophyllum nodosum dioecious)back to top |