mRNA_A-nodosum_M_contig916.37.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig916.37.1
Unique NamemRNA_A-nodosum_M_contig916.37.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5L780_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L780_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 6.580e-71
Identity = 157/378 (41.53%), Postives = 211/378 (55.82%), Query Frame = 2
Query:  704 TPVIEKYRHTPKHVRTCDQHVTTTMMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQFTG-DFEMQPAREPLELADASTMTDGPETEHFVVRSTEPFKGKRALHA-----------------KTKTSISVGVRKASCFCSSCKDQIWHACRVAVKFPDLVSNMREEKLGVVKSTYSFGTQSD*IIVEFPPFCVSTSEPLA 1783
            T  IEKYRH  + V TC    TTTMMVALVHHSPD +G HET+AW+FLS +  HD DFHH A+++++ HY  G  ++AT              + S  P   RV +FTDGC KQYKGKRNFR ++ +  +LGV I HNFA TSHFKGTHDGIG + K ++R AE++G  RI D   AH FL     E  K  E +F+ WSPY+IK   V+    + IPRP +DL GI G+   Y FTG + E +  ++   L  A+++  G +T+ FVV +     G + L A                 K   S  + VR ASC+CS+C+   +  C VA  +PDLV  + E+    +    + GTQ   +I+   P   S   P+A
Sbjct:  209 TDFIEKYRHEARVVLTCATAPTTTMMVALVHHSPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGPKSAAT--------------AGSAAP---RVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAVTSHFKGTHDGIGALMKRLLRNAEMHGT-RIPDVDVAHEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPPIDLTGIPGSSKLYFFTGTEDEQEDVQDTFSLVWATSV--GVQTDDFVVGAA----GDKVLTARKWVVDESRARXXXAPKKFTRSWKLRVRGASCYCSTCRIGCYGDCMVAKVYPDLVGEVMEKSGKEMVGRRTLGTQLTGVIL---PVISSDESPVA 559          
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.420e-68
Identity = 157/378 (41.53%), Postives = 211/378 (55.82%), Query Frame = 2
Query:  704 TPVIEKYRHTPKHVRTCDQHVTTTMMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQFTG-DFEMQPAREPLELADASTMTDGPETEHFVVRSTEPFKGKRALHA-----------------KTKTSISVGVRKASCFCSSCKDQIWHACRVAVKFPDLVSNMREEKLGVVKSTYSFGTQSD*IIVEFPPFCVSTSEPLA 1783
            T  IEKYRH  + V TC    TTTMMVALVHHSPD +G HET+AW+FLS +  HD DFHH A+++++ HY  G  ++AT              + S  P   RV +FTDGC KQYKGKRNFR ++ +  +LGV I HNFA TSHFKGTHDGIG + K ++R AE++G  RI D   AH FL     E  K  E +F+ WSPY+IK   V+    + IPRP +DL GI G+   Y FTG + E +  ++   L  A+++  G +T+ FVV +     G + L A                 K   S  + VR ASC+CS+C+   +  C VA  +PDLV  + E+    +    + GTQ   +I+   P   S   P+A
Sbjct:  565 TDFIEKYRHEARVVLTCATAPTTTMMVALVHHSPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGPKSAAT--------------AGSAAP---RVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAVTSHFKGTHDGIGALMKRLLRNAEMHGT-RIPDVDVAHEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPPIDLTGIPGSSKLYFFTGTEDEQEDVQDTFSLVWATSV--GVQTDDFVVGAA----GDKVLTARKWVVDESRARXXXAPKKFTRSWKLRVRGASCYCSTCRIGCYGDCMVAKVYPDLVGEVMEKSGKEMVGRRTLGTQLTGVIL---PVISSDESPVA 915          
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 3.980e-64
Identity = 142/331 (42.90%), Postives = 196/331 (59.21%), Query Frame = 2
Query:  704 TPVIEKYRHTPKHVRTCDQHVTTTMMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQFTGDF--EMQPAREPLELADASTMTDGPETEHFVVRSTEPFKGKRAL----HAKTKTSISVGVRKASCFCSSCKDQIWHACRVAVKFPDLVSNMRE 1678
            T  IEKY+H    + TC    +TTMMVALVHHSPD  G HET+AWVF+S +  HD DFH YA+ ++L++Y+ G+G +AT   A T                  V +FTDGCAKQYKGKRNF  ++ + H+LG ++ HNFA TSHFKG HDGIGG+ K ++R+AE  G  RI D++AA  FLK  + E  +D   +FS WSPY+I+R  +K L  R IPRPFVDL GI G+   YQF G    E + +   +E+   S +      E+ VV +   ++   ++     A TK    + VR+ASC+CS C    +  C  A K+  +V  +++
Sbjct:  580 TDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAAT---AGTP--------------TPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQ-RIHDTEAAADFLKA-YAEAKEDGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVSVEVQKESGVPPLVGGENEVVVNPLRWQADESIVLTVPAVTKR-YKLRVRQASCYCSKCSVGAYDDCVPAKKYEGMVGMVKD 890          
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 4.200e-63
Identity = 142/331 (42.90%), Postives = 196/331 (59.21%), Query Frame = 2
Query:  704 TPVIEKYRHTPKHVRTCDQHVTTTMMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQFTGDF--EMQPAREPLELADASTMTDGPETEHFVVRSTEPFKGKRAL----HAKTKTSISVGVRKASCFCSSCKDQIWHACRVAVKFPDLVSNMRE 1678
            T  IEKY+H    + TC    +TTMMVALVHHSPD  G HET+AWVF+S +  HD DFH YA+ ++L++Y+ G+G +AT   A T                  V +FTDGCAKQYKGKRNF  ++ + H+LG ++ HNFA TSHFKG HDGIGG+ K ++R+AE  G  RI D++AA  FLK  + E  +D   +FS WSPY+I+R  +K L  R IPRPFVDL GI G+   YQF G    E + +   +E+   S +      E+ VV +   ++   ++     A TK    + VR+ASC+CS C    +  C  A K+  +V  +++
Sbjct: 1204 TDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDNGRHETDAWVFVSSDPNHDFDFHIYAMDIILQYYITGDGRAAT---AGTP--------------TPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQ-RIHDTEAAADFLKA-YAEAKEDGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVSVEVQKESGVPPLVGGENEVVVNPLRWQADESIVLTVPAVTKR-YKLRVRQASCYCSKCSVGAYDDCVPAKKYEGMVGMVKD 1514          
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 2.060e-62
Identity = 139/305 (45.57%), Postives = 183/305 (60.00%), Query Frame = 2
Query:  704 TPVIEKYRHTPKHVRTCDQHVTTTMMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQFTGDFEMQPAREPLELADASTMTDGPET--EHFVVRSTEPFKGKRA--LHAKTKTS-ISVGVRKASCFCS 1603
            T  IEKY+H    V TC    +TTMMVALVHHSPD  G HET+AWVF+S +  HD DFH YA+ ++L +Y+ G+G +AT   A T               +  V +FTDGCAKQYKGK NF  ++ + H+LGVV+ HNFA TSHFKG HDGIGG+ K ++R+AE  G  RI +++AA  FL+  + E  +D   +FS+WSPY+IKR  +K L  R IPRPFVDL GI G+   YQF G  E+Q         +  T    P    E  VV + + ++   +  L   T T    + VR+ASC+CS
Sbjct:  314 TDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAAT---AGTP--------------VPTVHIFTDGCAKQYKGKHNFYAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQ-RIHNTQAAADFLQV-YAEAKEDGGGHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGA-EVQEEESSGVGVEVQTENGVPLVGGEKEVVANPQRWQADESTVLTLPTVTKRYKLRVRQASCYCS 598          
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 1.230e-61
Identity = 120/236 (50.85%), Postives = 153/236 (64.83%), Query Frame = 2
Query:  704 TPVIEKYRHTPKHVRTCDQHVTTTMMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQF 1411
            T  IEKY+H    + TC    +TTMMVALVHHSPD  G HET+ WV +S +  HD DFH YA+ ++L +Y+ G+G +AT   A T               +  V +FTDGCAKQYKGKRNF  ++ + H+LGVV+ HNFA TSHFKG HDGIGG+ K ++R+AE  G  RI D++AA  FLK  + E  +D   +FS WSPY+I+R  +K L  R IPRPFVDL GI G+   YQF
Sbjct:  292 TDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDDGRHETDTWVVVSSDPNHDFDFHIYAMDIILRYYITGDGRAAT---AGTP--------------VPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQ-RIHDTEAAADFLKA-YAEAKEDGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLMGISGSSKLYQF 508          
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5KXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK6_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.340e-61
Identity = 131/294 (44.56%), Postives = 177/294 (60.20%), Query Frame = 2
Query:  776 MMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQFTG----DFEMQPAREPLELADASTMTDGPETEHFVVRSTEPFKGKRA----LHAKTKTSISVGVRKASCFCSSCKDQIWHAC 1633
            MMVALVHHSPD  G HET+AWVF+S +  HD DFH YA+ ++L +Y+ G+G +AT   A T               +  V +FTDGCAKQYKGKRNF  ++ + H+LGVV+ HNFA TSHFKG HDGIGG+ K ++R+AE  G  RI +++AA  FL+  + E  +D   +FS+WSPY+IKR  +K L  R IPRPFVDL GI G+   YQF G    + E       ++  D  ++  G   E  VV + + ++   +    L A TK    + VR+ASC+CS C    +  C
Sbjct:    1 MMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAAT---AGTP--------------VPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQ-RIHNTQAAADFLQV-YAEAKEDGGGHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVGVEVQKEDGVSLVGG---EKEVVVNPQRWQADESTVLTLPAVTKR-YKLRVRQASCYCSKCSVGAYDDC 271          
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5K6N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N6_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.910e-61
Identity = 119/238 (50.00%), Postives = 153/238 (64.29%), Query Frame = 2
Query:  704 TPVIEKYRHTPKHVRTCDQHVTTTMMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQFTG 1417
            T  IEKY+H    V TC    +TTMMVALVHHSPD  G HET+AWVF+S +  HD DFH YA+ ++L +Y+ G+G      +A+T G             +  V +FTDGCAKQYKGKRNF  ++ + H+LGVV+ HNFA TSHFK   DGIGG+ K + R+ E  G  RI +++AA  FL+  + E  +D   +FS+WSPY+IKR  +K L  R IPRPFVDL GI G+   YQF G
Sbjct:   62 TDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDG------RADTAGTP-----------VPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGVVLIHNFAVTSHFKSADDGIGGLLKALSRETEERGQ-RIRNTQAAADFLQV-YAEAKEDGGGHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMG 280          
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5KR28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR28_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.760e-57
Identity = 126/300 (42.00%), Postives = 169/300 (56.33%), Query Frame = 2
Query:  776 MMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQFTGDFEMQPAREPLELADASTMTDGPETEHFVVRSTEPFKGKRALHAKTKTSISVGVRKASCFCSSCKDQIWHACRVAVKFPDLVSNMR 1675
            MMVALVHHSPD  G HET AWVF+S +  HD DFH YA+ ++L++Y++G+G +AT   A T               + +V +F DGCAKQYKGKRNF  ++ + H+LG ++ HNFA TS FKG HDGIGG+ K ++R AE  G  RI D++A   FLK  + E  +D   +FS W PY+IK   +K L  R IPRP VDL GI G+   YQF G           E+    +   G E +  +V +         L A TK    + VR+ASC CS C    +  C  A K+  +V  ++
Sbjct:    1 MMVALVHHSPDDDGRHETGAWVFVSSDPNHDFDFHIYAMDIILQYYIRGDGRAAT---AGTP--------------IPKVKIFADGCAKQYKGKRNFHAVAKSLHRLGAILIHNFAVTSQFKGAHDGIGGLLKALLRVAENRGQ-RIHDTQATADFLKA-YAEAKEDRGGHFSTWFPYRIKSFHIKLLGHREIPRPIVDLTGISGSSKLYQFMG----------AEVQQEESSGVGVEADESIVLT---------LPAVTKR-YELRVRQASCCCSKCSVGAYDDCFPARKYAGVVGMVK 261          
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Match: A0A6H5KHC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHC6_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 6.240e-57
Identity = 141/367 (38.42%), Postives = 191/367 (52.04%), Query Frame = 2
Query:  725 RHTPKHVRTCDQHVTTTMMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGEGASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLISLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDSKAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDLEGIKGTLSNYQFTGDFE-MQPAREPLELADASTMTDGPETEHFVVRST-------------EPFKGKRALHAKTKTSISVGVRKASCFCSSCKDQIWHACRVAVKFPDLVSNMREEKLGVVKSTYSFGTQSD*IIVEFPPFCVSTSEPLA 1783
            RH  + V TC    TTTMMVALVHHSPD +G HET+AW+ LS +  HD DF+H A+++++ HY  G  ++AT              + S  P   RV +FTDGC KQYKGKRNFR ++ + ++LGV I HNFA TSHFKGTHDGIG   K ++R AE+YG  RI D   A   L     +  K  E +F+  SPY+I+   V+    + IP   +DL GI G+   Y FTG  E  Q  +    L  A+++  G +T+   V +T             E +               + VR ASC+CS+C+   +  C VA  +PDLV  + E+         + GTQ    IV   P   S   P+A
Sbjct:   72 RHEARVVLTCATAPTTTMMVALVHHSPDDRGEHETDAWMCLSSDLNHDFDFYHAAMEVVIAHYTTGPKSAAT--------------AGSAAP---RVHMFTDGCGKQYKGKRNFRAVAQSLNRLGVRISHNFAVTSHFKGTHDGIGAHMKRLLRNAEMYGT-RIPDVDVAQEILLGYAAKADKAREGHFTTRSPYRIRSFEVRKFGPKEIPCLPIDLTGIPGSAKLYFFTGTGEEQQTVQGTCSLVWATSV--GVQTDDSGVEATGGKVLTARKWVVDESWAXXXXXXXXXXXXXKLRVRGASCYCSTCRVGCYDDCMVAKVYPDLVGKVMEKSGKENVGRRTLGTQLTGAIV---PVISSDESPVA 415          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig916.37.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L780_9PHAE6.580e-7141.53Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7E6_9PHAE1.420e-6841.53Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT99_9PHAE3.980e-6442.90Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWW3_9PHAE4.200e-6342.90MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5K491_9PHAE2.060e-6245.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY26_9PHAE1.230e-6150.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXK6_9PHAE1.340e-6144.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6N6_9PHAE1.910e-6150.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR28_9PHAE1.760e-5742.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHC6_9PHAE6.240e-5738.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig916contigA-nodosum_M_contig916:288655..290846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog6669.EFX77257
Model size1910
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.87e-08
EggNOG OGs2CNQC@1|root,2QXFF@2759|Eukaryota,39Y03@33154|Opisthokonta,3BMKX@33208|Metazoa,3D3RP@33213|Bilateria,4227P@6656|Arthropoda
Cds size957
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870374.0823271-UTR-A-nodosum_M_contig916:288654..2888671680870374.0823271-UTR-A-nodosum_M_contig916:288654..288867Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig916 288655..288867 +
1680870374.0930848-UTR-A-nodosum_M_contig916:289149..2897111680870374.0930848-UTR-A-nodosum_M_contig916:289149..289711Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig916 289150..289711 +
1680870374.115273-UTR-A-nodosum_M_contig916:290668..2908461680870374.115273-UTR-A-nodosum_M_contig916:290668..290846Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig916 290669..290846 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870374.1027362-CDS-A-nodosum_M_contig916:289711..2906681680870374.1027362-CDS-A-nodosum_M_contig916:289711..290668Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig916 289712..290668 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig916.37.1prot_A-nodosum_M_contig916.37.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig916 289712..290668 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig916.37.1

>prot_A-nodosum_M_contig916.37.1 ID=prot_A-nodosum_M_contig916.37.1|Name=mRNA_A-nodosum_M_contig916.37.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=319bp
MMVALVHHSPDGKGVHETEAWVFLSPEKQHDVDFHHYALQMMLEHYLKGE
GASATRRQANTEGEQARCDSSSRWPNLGRVILFTDGCAKQYKGKRNFRLI
SLNPHKLGVVIDHNFAATSHFKGTHDGIGGVAKNMMRKAELYGNHRITDS
KAAHAFLKKKFDEKVKDSETYFSAWSPYKIKRTRVKFLPLRSIPRPFVDL
EGIKGTLSNYQFTGDFEMQPAREPLELADASTMTDGPETEHFVVRSTEPF
KGKRALHAKTKTSISVGVRKASCFCSSCKDQIWHACRVAVKFPDLVSNMR
EEKLGVVKSTYSFGTQSD*
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mRNA from alignment at A-nodosum_M_contig916:288655..290846+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig916.37.1 ID=mRNA_A-nodosum_M_contig916.37.1|Name=mRNA_A-nodosum_M_contig916.37.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2192bp|location=Sequence derived from alignment at A-nodosum_M_contig916:288655..290846+ (Ascophyllum nodosum dioecious)
GGTGGTGGCTGACGAGTTGGAGGCTGTTACCGATGTTTGTCGGGCGCACA TCGAGGATATCGCGAGAGCATGCAAACGGGTACCACTGCCTCGACAACAA CCCAAAAAAGAAACCCGGGCGATCGTTCGTCGCGCGAGGTACGAGCGAAT CCTATTTCTGAGGCCATATCTTCTAGCAGCCGGCGGAGAGGAGGACGGGC ATCTTTGCAACAGGCAAGTCGGAATGTTGCACAAATGAACAACATAGTGT GCAACCTTGATTGTACATCACACGTAATACACCTCAGAAGTGAGTTTTGC TGTAGTGCAAGAAAGTGTATAAAAATATCTCTCGTAGACATGTGTACTCG GCGATAATGAGATGTTAGTTAATGCGATGTCGGGCCGGTTGCTTTCTTTT CGACTGTAGTAAATGCACTCTGAGCCAAATATGATTTGATGTTGTAATAA TATTGATACTATACTATTCTTTACACACTTTCCGTTCGTTTTCAGCCTCA AGAAGAGACGCCACGAGTCGGTGGGAAGATGCACATCCATGAGCTGCGAC AGGCCCTCGAGAAAGATCCTGATTTCCTTCACGAGCTGGGGCTAATGTGG AAAGAGGACGCAGAAGTATACAAAGCTAACTCCAGGGAGCTCTCAGCATC GTTAGCCCTAATCTCATCGAATGGACAAGGAAATACAGAGATTGGGCGCA TCGCAAAACAAACAGTTATGGCGTGCTTCGCAGGTACGGGAGAGCATTCG GCACACGTCTCCCTTAGAGCTCGCGCTGAGAGCATTGGGGTACGACGTGG CACGTTAGCCGAGGCACAACAGCGTATGCAAGCAGCCCGTCACGACATAC TGCCGGCATCAGCTCTCGAAAGTGGCGAATATATATGGACCAAGCGTGAA AAGCGGAACGACGCGACGAGCGACGAGGTTCTAGCTCTTGCGAACCGATA CTGGCACTGTGACGACGTTTCCCGTGCAACCGGTAACTCCGGTGATCGAG AAATACCGGCATACACCCAAACACGTGAGGACCTGCGATCAGCACGTAAC TACGACCATGATGGTAGCTCTTGTGCACCACAGCCCCGACGGCAAGGGAG TACATGAGACCGAGGCATGGGTGTTCTTGTCGCCCGAGAAGCAGCATGAT GTGGATTTTCACCATTATGCGCTTCAGATGATGTTAGAGCACTACCTCAA GGGGGAGGGGGCATCGGCAACGAGAAGGCAAGCCAACACGGAGGGTGAAC AAGCTCGTTGTGACTCGTCTTCGCGTTGGCCAAACCTGGGGAGGGTGATC CTTTTCACCGATGGATGCGCGAAACAGTATAAGGGGAAAAGGAACTTCCG GCTGATCTCTCTCAACCCGCACAAGCTTGGCGTGGTCATCGACCATAACT TTGCCGCCACGTCTCACTTCAAAGGAACCCATGATGGAATAGGTGGTGTC GCAAAGAATATGATGCGGAAGGCCGAGTTGTACGGGAACCACCGCATCAC AGACTCGAAAGCTGCGCATGCGTTCTTGAAAAAGAAATTCGACGAAAAGG TTAAGGATTCGGAAACTTACTTCTCGGCGTGGTCACCGTACAAGATCAAG CGCACTCGTGTCAAGTTCCTACCACTTCGCAGTATTCCGCGGCCGTTCGT CGACTTGGAGGGCATCAAAGGAACTCTGAGTAACTATCAGTTTACGGGGG ACTTCGAAATGCAGCCAGCGCGCGAGCCGCTGGAGCTAGCTGACGCGAGC ACAATGACCGATGGGCCGGAGACTGAGCACTTTGTAGTGAGGTCAACGGA GCCATTCAAAGGAAAGCGCGCCCTCCACGCCAAGACGAAGACTTCCATCT CCGTTGGTGTTCGTAAAGCTTCGTGCTTTTGCTCGAGCTGCAAGGATCAG ATCTGGCACGCATGTCGAGTAGCTGTAAAGTTTCCTGACTTGGTTAGCAA TATGCGGGAAGAGAAATTGGGTGTGGTGAAGTCCACCTATTCTTTTGGAA CTCAAAGCGATTGAATCATCGTCGAATTTCCCCCTTTTTGTGTGTCTACT AGTGAACCACTGGCACTCATTCATGGCGCTCGCGACCTGTCCTTTTAGTC CCACTTGTGGCAGACGTTTTGGCTCCAGGTGGATGCCGGCATTTTCTTTG ATGTGTTTATTGTTTGCGACATATAGAACAGCACATTACCGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig916:288655..290846+

>mRNA_A-nodosum_M_contig916.37.1 ID=mRNA_A-nodosum_M_contig916.37.1|Name=mRNA_A-nodosum_M_contig916.37.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=957bp|location=Sequence derived from alignment at A-nodosum_M_contig916:288655..290846+ (Ascophyllum nodosum dioecious)
ATGATGGTAGCTCTTGTGCACCACAGCCCCGACGGCAAGGGAGTACATGA
GACCGAGGCATGGGTGTTCTTGTCGCCCGAGAAGCAGCATGATGTGGATT
TTCACCATTATGCGCTTCAGATGATGTTAGAGCACTACCTCAAGGGGGAG
GGGGCATCGGCAACGAGAAGGCAAGCCAACACGGAGGGTGAACAAGCTCG
TTGTGACTCGTCTTCGCGTTGGCCAAACCTGGGGAGGGTGATCCTTTTCA
CCGATGGATGCGCGAAACAGTATAAGGGGAAAAGGAACTTCCGGCTGATC
TCTCTCAACCCGCACAAGCTTGGCGTGGTCATCGACCATAACTTTGCCGC
CACGTCTCACTTCAAAGGAACCCATGATGGAATAGGTGGTGTCGCAAAGA
ATATGATGCGGAAGGCCGAGTTGTACGGGAACCACCGCATCACAGACTCG
AAAGCTGCGCATGCGTTCTTGAAAAAGAAATTCGACGAAAAGGTTAAGGA
TTCGGAAACTTACTTCTCGGCGTGGTCACCGTACAAGATCAAGCGCACTC
GTGTCAAGTTCCTACCACTTCGCAGTATTCCGCGGCCGTTCGTCGACTTG
GAGGGCATCAAAGGAACTCTGAGTAACTATCAGTTTACGGGGGACTTCGA
AATGCAGCCAGCGCGCGAGCCGCTGGAGCTAGCTGACGCGAGCACAATGA
CCGATGGGCCGGAGACTGAGCACTTTGTAGTGAGGTCAACGGAGCCATTC
AAAGGAAAGCGCGCCCTCCACGCCAAGACGAAGACTTCCATCTCCGTTGG
TGTTCGTAAAGCTTCGTGCTTTTGCTCGAGCTGCAAGGATCAGATCTGGC
ACGCATGTCGAGTAGCTGTAAAGTTTCCTGACTTGGTTAGCAATATGCGG
GAAGAGAAATTGGGTGTGGTGAAGTCCACCTATTCTTTTGGAACTCAAAG
CGATTGA
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