mRNA_A-nodosum_M_contig910.8.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: D8LPQ2_ECTSI (ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPQ2_ECTSI) HSP 1 Score: 363 bits (933), Expect = 8.590e-127 Identity = 179/194 (92.27%), Postives = 186/194 (95.88%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQFDMHKITQVAFRLQPCSGLTCEGIPEGIVWIVDEAKKMARPRVDA 582
FSLIAGL RYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKV GIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEE R+AF+TVKEQGELHG+PL+MLANKQDLPEAIS ADISVQFDMHKIT+VAFRLQPCSGLTC+G+ EGI WIVDEAKK ARPRVDA
Sbjct: 1 MFSLIAGLIRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADISVQFDMHKITKVAFRLQPCSGLTCDGVAEGIHWIVDEAKKRARPRVDA 194
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: A0A835YY21_9STRA (ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY21_9STRA) HSP 1 Score: 263 bits (671), Expect = 6.570e-87 Identity = 126/186 (67.74%), Postives = 153/186 (82.26%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQFDMHKITQVAFRLQPCSGLTCEGIPEGIVWIVDEAKK 558
FSL+AGL+RYL SKT++NVLILGLD AGKTTLLEQMKGIFKKVPGIPP+KIPPT+GLNV KMD+GG +TFWD+GGQVR+R+LWE+YYADAH LI VMDSAD RFEE +LAF V+EQ ELH +PLL+LANKQD+ A S DI+ QFD HK+ V FR+ S L+ EG+ EGI W++ +A++
Sbjct: 1 MFSLLAGLWRYLTSKTQVNVLILGLDDAGKTTLLEQMKGIFKKVPGIPPAKIPPTIGLNVAKMDIGGVSVTFWDVGGQVRLRALWERYYADAHALICVMDSADAARFEEAQLAFHAVREQAELHALPLLLLANKQDVAGACSGGDIAAQFDAHKVMGVPFRVHAVSALSGEGVNEGISWLIAKARE 186
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: A0A7S2BA16_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA16_9STRA) HSP 1 Score: 257 bits (656), Expect = 8.160e-84 Identity = 118/189 (62.43%), Postives = 154/189 (81.48%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQFDMHKITQVAFRLQPCSGLTCEGIPEGIVWIVDEAKKMAR 567
FSLI+G ++ F+K E+ VLILGLD+AGKTTLLEQMKG+F K GIPP +IPPT+GLN+GKMDVG C++ FWDLGGQVR+RS+WEKYYA+AHG++FV+DSADVGR EE +LAF+ V+E EL GIP+L+LANKQDLP A++ DI++ F++H + RLQP S LTCEGI +G+ W+V+E++ R
Sbjct: 60 MFSLISGFWKIFFAKVEVQVLILGLDHAGKTTLLEQMKGLFNKQQGIPPERIPPTIGLNIGKMDVGTCRVIFWDLGGQVRMRSIWEKYYAEAHGMVFVIDSADVGRMEEAKLAFDAVREHEELRGIPVLLLANKQDLPGAMAIEDIAMHFEIHNLPPRLVRLQPASCLTCEGIEDGVRWVVEESRTADR 248
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: W7TPL1_9STRA (1-family small gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL1_9STRA) HSP 1 Score: 246 bits (628), Expect = 2.370e-80 Identity = 115/190 (60.53%), Postives = 152/190 (80.00%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQFDMHKITQV-AFRLQPCSGLTCEGIPEGIVWIVDEAKKMAR 567
FSL+AG +YLFSKTE++VLILGLD+AGKTTLLEQ KGIF+KV GIPP KI PTVGLNVGKMD+ GC + WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEE +LAF ++ + +L +P+L+ ANKQDLP A+S D++ F++ ++ + ++ CS LTCEG+ G+ W+V EAK +AR
Sbjct: 1 MFSLLAGFIKYLFSKTEVHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: A0A4D9CTS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTS6_9STRA) HSP 1 Score: 226 bits (576), Expect = 4.520e-65 Identity = 104/175 (59.43%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 46 TEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQFDMHKITQV-AFRLQPCSGLTCEGIPEGIVWIVDEAKKMAR 567
++++VLILGLD+AGKTTLLEQ KGIF+KV GIPP KI PTVGLNVGKMD+ GC + WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEE +LAF ++ + +L +P+L+ ANKQDLP A+S D++ F + ++ + ++ PCS LTCEG+ G+ W+V EAK +AR
Sbjct: 1022 SQLHVLILGLDHAGKTTLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFKIDRVLRHRVIQVHPCSALTCEGLESGVRWLVQEAKGLAR 1196
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: A0A8J6CF14_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF14_DIALT) HSP 1 Score: 206 bits (524), Expect = 1.720e-64 Identity = 101/191 (52.88%), Postives = 137/191 (71.73%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQFDMHKITQVA--FRLQPCSGLTCEGIPEGIVWIVDEAKKMAR 567
FSLIAGLF YLF K E VLILG+D+AGKTT LEQMKG+F+K+ + P KIPPTVGLN+G+M+VG KL FWDLGGQ +R +WEKY+A+ HGL++V+D+AD RF+E R FE + + +L G+P+L+LANKQDL A + +I +F + + +R++P S +T GI +GI W+VD K +R
Sbjct: 1 MFSLIAGLFEYLFKKAEFQVLILGVDHAGKTTALEQMKGLFQKIEPLAPEKIPPTVGLNIGRMEVGRVKLIFWDLGGQSGLRGIWEKYFAEVHGLVYVIDAADDQRFDESRRIFEALVKHPDLAGVPVLILANKQDLHSAATIDEIDERFGFGSLCAPSQQYRIEPVSAITGSGIADGITWMVDMLKLSSR 191
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: A0A7S2WHH1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WHH1_9STRA) HSP 1 Score: 206 bits (524), Expect = 4.190e-64 Identity = 108/211 (51.18%), Postives = 142/211 (67.30%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQF-----DMHKITQVAF---------------------RLQPCSGLTCEGIPEGIVWIVDEA 552
FSL++G F++LFSKTEI +LI+GLD+AGKTTLLEQMKGIF+K IP KIPPTVGLN+G+MD+ C++ FWDLGGQ+ +RS+W+KYY++AHGLIFV+DSAD+ RFEE + A E++ EL G+PLL+ ANKQDL + +I+ F + KI A +LQP S LTC GI +GI W+V+ A
Sbjct: 1 MFSLLSGFFKWLFSKTEIQILIIGLDHAGKTTLLEQMKGIFQKAANQIPLDKIPPTVGLNIGRMDIDNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADIDRFEEAKAAMESIASHPELAGVPLLVCANKQDLATSRGYDEINEYFRVVSESLGKIGSNADSEQNSMNASEHILSLGKRRERKLQPVSALTCSGIEDGIRWLVNAA 211
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: A0A484KDI7_9ASTE (Uncharacterized protein n=5 Tax=Convolvulaceae TaxID=4118 RepID=A0A484KDI7_9ASTE) HSP 1 Score: 196 bits (498), Expect = 1.770e-60 Identity = 95/189 (50.26%), Postives = 132/189 (69.84%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQFDMHKITQVAFRLQPCSGLTCEGIPEGIVWIVDEAKKMAR 567
FSL GL++Y+FSKTE +VLILG+D AGKTTLLE++K F + G+PP +I PTVGLN+G+++V KL FWDLGGQ +RS+WEKYY +AH ++FV+D+A RFE+ + A E V +LHG PLL+LANKQDL EA SA ++ D+ K+ + +++Q S GI E + W+VD ++ R
Sbjct: 1 MFSLFYGLWKYVFSKTEFHVLILGIDKAGKTTLLEKLKSQFLNIEGLPPDRIVPTVGLNIGRVEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVLFVVDAACPSRFEDAKSALEKVLRHEDLHGAPLLILANKQDLAEAASAEELDRYLDLKKLGERVYKIQAVSAYEGIGIKESVNWLVDAMERSKR 189
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: A0A2R5GXN1_9STRA (ADP-ribosylation factor-related protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GXN1_9STRA) HSP 1 Score: 196 bits (497), Expect = 9.880e-60 Identity = 93/153 (60.78%), Postives = 120/153 (78.43%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQFDM 456
FSL++G F++LFSKTE+ +LI+GLD+AGKTTLLEQMKGIF K IP KIPPTVGLN+G+MD+ C++ FWDLGGQ+ +RS+W+KYY++AHGLIFV+DSAD RFEE + A E++ + EL G+PLL+ ANKQDLP A DI F +
Sbjct: 1 MFSLLSGFFKWLFSKTEVQILIIGLDHAGKTTLLEQMKGIFHKSANQIPLDKIPPTVGLNIGRMDINNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADTDRFEEAKAAMESLVDHPELTGVPLLVCANKQDLPTAKEFEDIDAYFQI 153
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Match: A0A0A0L9R1_CUCSA (Uncharacterized protein n=14 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L9R1_CUCSA) HSP 1 Score: 194 bits (493), Expect = 1.020e-59 Identity = 93/192 (48.44%), Postives = 134/192 (69.79%), Query Frame = 1
Query: 1 QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEVRLAFETVKEQGELHGIPLLMLANKQDLPEAISAADISVQFDMHKITQVAFRLQPCSGLTCEGIPEGIVWIVDEAKKMARPRV 576
FSL GL++YLFSKTE +VLILG+D AGKTTLLE++K ++ + G+ P +I PTVGLN+G+++V KL FWDLGGQ +RS+WEKYY +AH +I+V+D+A +FE+ + A E V +L G PLL+LANKQDLPEA+SA ++S D+ K+ + + + SG GI + + W+VD ++ R +
Sbjct: 1 MFSLFYGLWKYLFSKTEFHVLILGIDKAGKTTLLEKLKSLYSNLEGLSPDRIVPTVGLNIGRLEVLNAKLVFWDLGGQPGLRSIWEKYYEEAHAVIYVIDAACPSKFEDSKSALEKVLRHEDLQGAPLLVLANKQDLPEAVSAEELSRYLDLKKLDERVYMFEAVSGYDGMGIKDSVEWLVDIMERSKRTEI 192 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig910.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig910.8.1 >prot_A-nodosum_M_contig910.8.1 ID=prot_A-nodosum_M_contig910.8.1|Name=mRNA_A-nodosum_M_contig910.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=195bp QFSLIAGLFRYLFSKTEINVLILGLDYAGKTTLLEQMKGIFKKVPGIPPSback to top mRNA from alignment at A-nodosum_M_contig910:72057..75337- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig910.8.1 ID=mRNA_A-nodosum_M_contig910.8.1|Name=mRNA_A-nodosum_M_contig910.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3281bp|location=Sequence derived from alignment at A-nodosum_M_contig910:72057..75337- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig910:72057..75337- >mRNA_A-nodosum_M_contig910.8.1 ID=mRNA_A-nodosum_M_contig910.8.1|Name=mRNA_A-nodosum_M_contig910.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=585bp|location=Sequence derived from alignment at A-nodosum_M_contig910:72057..75337- (Ascophyllum nodosum dioecious)back to top |