mRNA_A-nodosum_M_contig910.24.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: W7TMY0_9STRA (Folylpolyglutamate synthetase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMY0_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.350e-28 Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 3
Query: 318 GKGSVCELLRSSLHAHGRCVGTFTSPHVHTIRERIRVGESLIPRDALIR------HTMTLQGVFHENP------WLLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPAIVSVITSISYDH 671
GKG+VCEL+R L AHG+ VGTFTSPH+HT+RERIRV + LI R +R + G+ P W FFDK+L +AL +F E ++ ++LEVGIGG+YD TNF P IV V+TS+S DH
Sbjct: 157 GKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDVLISRADFVRLWHKVHAALVPSGIDDAGPVRCEGTWANFFDKVLGVALAWFVEQQVEYIILEVGIGGRYDPTNFIAHP-IVCVVTSVSEDH 285
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: A0A4D9D7G1_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7G1_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.520e-27 Identity = 65/130 (50.00%), Postives = 83/130 (63.85%), Query Frame = 3
Query: 318 GKGSVCELLRSSLHAHGRCVGTFTSPHVHTIRERIRVGESLIPRDALIR------HTMTLQGVFHENP------WLLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPAIVSVITSISYDH 671
GKG+VCEL+R L AHG+ VGTFTSPH+HT+RERIRV + LI R +R + G P W FFDK+L +AL +F E ++ ++LEVGIGG+YD TNF P IV V+TS+S DH
Sbjct: 741 GKGTVCELVRCGLIAHGKRVGTFTSPHLHTVRERIRVNDVLISRADFVRLWHKVHAALVPSGSDDAGPARCGGTWANFFDKVLGVALAWFVEQQVEYIILEVGIGGRYDPTNFIAHP-IVCVVTSVSEDH 869
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: A0A7S3HLR6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLR6_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.360e-27 Identity = 63/142 (44.37%), Postives = 82/142 (57.75%), Query Frame = 3
Query: 318 GKGSVCELLRSSLHAHGRCVGTFTSPHVHTIRERIRVGESLIPRDALIRHTMTLQGVFHENPWLLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPAIVSVITSISYDHQVSFVTCRISTFQLEKGFVKSAKH 743
GKGS E + SSL +G VG FTSPH+HT RER++V LI +IR + PW++FFD LLA+A+R+F E + ++LE GIGG+YD+TNF PA VITSIS DHQ + G +K H
Sbjct: 94 GKGSAVEYISSSLIGNGNSVGIFTSPHMHTARERVKVNRELIAHSDMIRLGNEVLAELSPQPWVVFFDLLLALAVRYFNEKNVQYMILESGIGGRYDTTNFVDNPA-ACVITSISLDHQALLGDTVEEIAYQKAGIIKPKSH 234
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: A0A835Z390_9STRA (Mur ligase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z390_9STRA) HSP 1 Score: 110 bits (276), Expect = 8.690e-27 Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 3
Query: 384 FTSPHVHTIRERIRVGESLIPRDALIRHTMTLQGVFHENPWLLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPAIVSVITSISYDHQ 674
FTSPH+HT+RERIR+G LIPR L R T +L F PW++FFD+LLA+AL +F E G + ++LE G+GG+YD TN PA+ ++T+IS DH+
Sbjct: 1 FTSPHLHTVRERIRLGAELIPRSDLARITASLVPGFQAEPWMIFFDRLLAVALTWFQERGAELVILEAGVGGRYDPTNIILPPALC-IVTNISLDHE 96
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: A0A7S3NJD0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJD0_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.950e-23 Identity = 61/125 (48.80%), Postives = 80/125 (64.00%), Query Frame = 3
Query: 318 GKGSVCELLRSSLHAHGRCVGTFTSPHVHTIRERIRVGESLIPRDALIR----HTMTLQGVFHENPW-LLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPA--IVSVITSISYDH 671
GKGSVCE +R+ L G VGTFTSPH+H+ RERIR+G LI + L +Q ++ W +FFD+LLA AL +F+ + +V+E GIGGKYDSTNF + P V+VITS+S DH
Sbjct: 63 GKGSVCESIRARLVKAGLRVGTFTSPHLHSCRERIRIGSQLISANDLTEVGSAALQLIQNAEDKSEWGAVFFDRLLAAALIYFSTERCEIVVMETGIGGKYDSTNFIQDPQQLAVAVITSLSLDH 187
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: A0A7S2RCR3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCR3_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.000e-21 Identity = 53/118 (44.92%), Postives = 68/118 (57.63%), Query Frame = 3
Query: 318 GKGSVCELLRSSLHAHGRCVGTFTSPHVHTIRERIRVGESLIPRDALIRHTMTLQGVFHENPWLLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPAIVSVITSISYDH 671
GKGSVC + + L G G FTSPHVH RERI+VG I + W++ FD+ LA+AL FA G+ +VLE GIGG++DSTNF +P V V+T IS+DH
Sbjct: 87 GKGSVCSCIHAGLCESGVAAGLFTSPHVHVFRERIQVGRERITETDFLEVWDACAPALASEAWMVPFDRYLAVALVHFARRGVQVVVLETGIGGRFDSTNFVSQPE-VCVLTRISHDH 203
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: A0A7C7RT57_9CHLR (Bifunctional folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7RT57_9CHLR) HSP 1 Score: 102 bits (253), Expect = 7.560e-21 Identity = 52/118 (44.07%), Postives = 74/118 (62.71%), Query Frame = 3
Query: 318 GKGSVCELLRSSLHAHGRCVGTFTSPHVHTIRERIRVGESLIPRDALIRHTMTLQGVFHENPWLLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPAIVSVITSISYDH 671
GKGS ++ S+L A G G +TSPH+HT RERIRVG LI R+ ++ L+ + + P F+ + A+A +FA G++ LV EVG+GG+ D+TN + VSVITS+S DH
Sbjct: 33 GKGSTAAMVESALRAGGYRTGLYTSPHLHTFRERIRVGGGLISREEVVALVEELRSLIAQVPGTTTFEAITAMAFAYFARQGVEMLVAEVGLGGRLDATNVLKPE--VSVITSLSLDH 148
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: A0A8J2S6F4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6F4_9STRA) HSP 1 Score: 102 bits (253), Expect = 7.890e-21 Identity = 64/123 (52.03%), Postives = 77/123 (62.60%), Query Frame = 3
Query: 318 GKGSVCELLRSSLHAHGRCVGTFTSPHVHTIRERIRVGESLIPRDALIRH---TMTLQGVFHENPW-LLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPAI-VSVITSISYDH 671
GKGSV ELLRS+L G VG FTSPH+H RERIRVG I +AL R+ + L + W +FFD+LLA AL F E LVLE G+GG +DSTNFF + ++VITSIS DH
Sbjct: 62 GKGSVSELLRSAL---GPKVGCFTSPHLHGCRERIRVGAEPISVEALRRNGEKALDLARKLEADEWGCVFFDRLLATALLHFGEEACPRLVLEAGVGGVHDSTNFFTDQELELAVITSISLDH 181
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: A0A3M1LWG8_9CHLR (Bifunctional folylpolyglutamate synthase/dihydrofolate synthase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1LWG8_9CHLR) HSP 1 Score: 101 bits (251), Expect = 1.370e-20 Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = 3
Query: 318 GKGSVCELLRSSLHAHGRCVGTFTSPHVHTIRERIRVGESLIPRDALIRHTMTLQGVFHENPWLLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPAIVSVITSISYDH 671
GKGSV + S+L A G G +TSPH+HT RERIRV A+ LQ + ++P + +F+ + AIA +FAEVG++ V+EVG+GG+ D+TN VSVITS+SYDH
Sbjct: 11 GKGSVAAMCESALRASGVHTGLYTSPHLHTFRERIRVDGWPADPQAIADLVSRLQHLLPDHPGVTWFEAVTAIAFLYFAEVGVEFAVIEVGLGGRLDATNVITPQ--VSVITSLSYDH 126
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Match: A0A0F6YI05_9DELT (Dihydrofolate synthase/folylpolyglutamate synthase n=1 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6YI05_9DELT) HSP 1 Score: 100 bits (250), Expect = 1.700e-20 Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 3
Query: 318 GKGSVCELLRSSLHAHGRCVGTFTSPHVHTIRERIRVGESLIPRDALIRHTMTLQGVFH--ENPWLLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFFRRPAIVSVITSISYDHQVSFVTCRISTFQLEKGFVKSAKHRTIYGKI 764
GKGSVC +L L A G G +TSPH+H+ RERIRV + RD ++R ++ + P L FF+ IAL F E D +VLEVG+GG+ D+TN P + + ITSI+ DHQ ++ I+ EK + + + G++
Sbjct: 49 GKGSVCAMLERVLRASGLRTGLYTSPHLHSFRERIRVDGEPVSRDEVVRRASEIRTTVEAPDAPQLTFFEVTTLIALEAFREARCDVVVLEVGLGGRLDATNVIDVP-LATAITSIALDHQ-QYLGSTITEIAREKAGIAKPRVPLVLGRV 197 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig910.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig910.24.1 >prot_A-nodosum_M_contig910.24.1 ID=prot_A-nodosum_M_contig910.24.1|Name=mRNA_A-nodosum_M_contig910.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=100bp MTLQGVFHENPWLLFFDKLLAIALRFFAEVGIDTLVLEVGIGGKYDSTNFback to top mRNA from alignment at A-nodosum_M_contig910:162098..163932+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig910.24.1 ID=mRNA_A-nodosum_M_contig910.24.1|Name=mRNA_A-nodosum_M_contig910.24.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1835bp|location=Sequence derived from alignment at A-nodosum_M_contig910:162098..163932+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig910:162098..163932+ >mRNA_A-nodosum_M_contig910.24.1 ID=mRNA_A-nodosum_M_contig910.24.1|Name=mRNA_A-nodosum_M_contig910.24.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=300bp|location=Sequence derived from alignment at A-nodosum_M_contig910:162098..163932+ (Ascophyllum nodosum dioecious)back to top |