mRNA_A-nodosum_M_contig910.19.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig910.19.2
Unique NamemRNA_A-nodosum_M_contig910.19.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: A0A835ZFY6_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFY6_9STRA)

HSP 1 Score: 417 bits (1073), Expect = 3.490e-139
Identity = 225/321 (70.09%), Postives = 268/321 (83.49%), Query Frame = 1 
Query:   16 WAS-TRHASTLVVAEHDNTNLSSSTLSAVSAAGMIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            W+S +R ASTLVVAEH+N  LS  TLSAV+AAG I G+V +LVLG  +  VA+ A+KV+GV+KVLH DHPA+  ++AEN +R + A   A  Y+H++A+S+MAGKNF+GRLGAE+  +PVTD+I+V+D+ TF RPMYAGNA+ATV +SDPLK+LTVRPTAFDK   +GG+A +E+A P     + GL+  VSE++S  +RPDL AARVVVSGGRGMKNGE+F MLE LADKLGGAVGASRAAVDAG+VPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIF  ADYGLVADLF AVPEL  K+
Sbjct:   22 WSSNSRLASTLVVAEHNNKALSPGTLSAVTAAGKIGGEVHLLVLGSGSAPVAEAASKVAGVAKVLHGDHPAYAHFLAENTSRGVRASAEAHKYTHVMAISSMAGKNFIGRLGAEMDLAPVTDVIKVVDESTFERPMYAGNAIATVTASDPLKLLTVRPTAFDKAPATGGSAAVEAA-PLPAEPETGLSKFVSESVSSSARPDLGAARVVVSGGRGMKNGENFAMLEALADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFTVADYGLVADLFTAVPELTKKL 341
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: A0A2D4CIU3_PYTIN (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIU3_PYTIN)

HSP 1 Score: 377 bits (967), Expect = 2.000e-123
Identity = 206/326 (63.19%), Postives = 254/326 (77.91%), Query Frame = 1 
Query:    1 RYVRQWAST-RHASTLVVAEHDNTNLSSSTLSAVSAAGMIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            ++VR+ A+  R  STLV+AEH+   +S STLSAV+AA  I GDVT+LVLG +AD VAQ AAK++GVS VLH     +   +AE+VT  +VA Q   S+SHI+A S+ A KN++ RLGA+L  +P++DII V D +TF+RP YAGNA+A V+S D +K++TVRPT F+K A  GG A + +A    +    G +  VSE +S   RPDLTAARVV+SGGRG+K+GE+F ML +LADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+AVGISGAIQHL+GMKDSK IVAINKD+EAPIFQ +DYGLVADLF AVPEL  K+
Sbjct:    5 QFVRRVATVNRSFSTLVIAEHNQKEVSGSTLSAVTAASKIGGDVTLLVLGSQADAVAQSAAKIAGVSNVLHAKDAKYDHLLAEDVTELLVATQKEKSFSHILAPSSNASKNYLPRLGAKLDTAPISDIIAVADKDTFLRPTYAGNAIAQVKSKDAVKIITVRPTGFEKAAAEGGNAAVAAA---PEAAATGKSQFVSEEVSKSERPDLTAARVVISGGRGLKSGENFDMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 327
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: A0A5D6Y5S8_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5S8_9STRA)

HSP 1 Score: 376 bits (966), Expect = 3.350e-123
Identity = 200/319 (62.70%), Postives = 250/319 (78.37%), Query Frame = 1 
Query:   19 ASTRHASTLVVAEHDNTNLSSSTLSAVSAAGMIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            +S R  STLVVAEH+  +++  TLSAV+AA  + GDVTVLVLG +A GVA QAAK++GVS VLH     +   +AE VT  +VA Q A  Y+HI+A S+ A KN++ R+GA+L  +P++D++ V D +TF RPMYAGNA+A V SSD +K+LTVRPT F+K A  GG+A +    P  +    G T+ VSE +S   RPDLT+ARVV++GGRG+K+G++F++L +LADKLGGAVGASRAAVDAG+VPNELQVGQTGKVVAPELY+AVGISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLVADLF AVPEL  K+
Sbjct:   17 SSARSLSTLVVAEHNLKDVTGGTLSAVTAASQLGGDVTVLVLGSQAAGVAAQAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQQANQYTHIVAPSSNASKNYIPRVGAKLDVAPISDVLAVADKDTFFRPMYAGNAIAKVTSSDAVKLLTVRPTGFEKAAAEGGSAAVS---PAPEAPTVGKTAFVSEEVSKSERPDLTSARVVIAGGRGLKSGDNFELLYKLADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 332
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: K3WS82_GLOUD (Electron transfer flavoprotein subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS82_GLOUD)

HSP 1 Score: 375 bits (963), Expect = 8.540e-123
Identity = 202/325 (62.15%), Postives = 253/325 (77.85%), Query Frame = 1 
Query:    1 RYVRQWASTRHASTLVVAEHDNTNLSSSTLSAVSAAGMIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            R V  +AS+R  STLVVAEH+  +++  TLSAV+AA  I GDVTVLVLG +A G+A QAAK++GVS VLH     +   +AE VT  +VA Q   +++HI+A S+ A KN++ R+GA+L  +P++DI+ V D +TF+RP YAGNA+A ++S D +K++TVRPT F+K AT GG+A   S +P  +    G T  VSE +S   RPDLT+ARVVVSGGRG+K+GE+F+ML +LADKL GAVGASRAAVDAG+VPNELQVGQTGKVVAPELYIA GISGAIQHL+GMKDSK IVAINKD+EAPIFQ +DYGLVADLF AVPEL  K+
Sbjct:    8 RRVATFASSRSLSTLVVAEHNQKDVTGGTLSAVTAATKIGGDVTVLVLGSQAAGIADQAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQKEKNFTHILAPSSNASKNYLPRVGAKLDVAPISDILAVADKDTFLRPTYAGNAIAQIKSKDAVKLITVRPTGFEKAATEGGSA---SVSPAPEAATVGKTQFVSEEVSKSDRPDLTSARVVVSGGRGLKSGENFEMLYKLADKLNGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 329
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: A0A067CIA0_SAPPC (Electron transfer flavoprotein subunit alpha n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CIA0_SAPPC)

HSP 1 Score: 372 bits (956), Expect = 9.320e-122
Identity = 207/325 (63.69%), Postives = 245/325 (75.38%), Query Frame = 1 
Query:    1 RYVRQWASTRHASTLVVAEHDNTNLSSSTLSAVSAAGMIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            R + + ++ R ASTLVVAEH    L+  TLSA++AA  I GD+TVLV G     VAQ+AA V GV  VLH D   +   +AE VT  + AVQAA S+SHI+A S+   KNFV RLGA L  +P+TD++ V+D+ TF RPMYAGNA+ATV SSD +K++T+RPT F+K A +GG+A + SA PT     A LT  VSE  S   RPDL +ARVVVSGGRGMK+GE+F+ML  LADKL GAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD EAPIFQ +DYG+V DLF  VPEL  K+
Sbjct:    7 RALSKLSAARFASTLVVAEHAGQKLTGGTLSAITAASKIGGDITVLVSGSNTAAVAQEAAAVQGVKAVLHADSAQYDHAIAEEVTNLVAAVQAASSFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDETTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFEKAAATGGSASV-SAAPTA--APANLTKFVSEETSSSDRPDLASARVVVSGGRGMKSGENFEMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVSDYGVVDDLFKVVPELTEKI 328
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: A0A6G0XJ74_9STRA (Electron transfer flavoprotein subunit alpha n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ74_9STRA)

HSP 1 Score: 372 bits (955), Expect = 1.320e-121
Identity = 206/316 (65.19%), Postives = 240/316 (75.95%), Query Frame = 1 
Query:   28 RHASTLVVAEHDNTNLSSSTLSAVSAAGMIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            R ASTLVVAEH+  +L+  TLSA++AA  I GDVTVLV G  +  VAQ AA V GV  VLH D       +AE +T  +V VQ A +++HI+A S+   KNF+ R+GA L  SP TD++ V+D+ TF RPMYAGNA+ATV SSD +K+LTVRPT FDK AT+GGA  + +A        AGL+  VSE  S   RPDLT+ARVVVSGGRGMK+GE+F +L  LADKL GAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD EAPIFQ ADYGLV DLF+AVPEL  K+
Sbjct:   16 RFASTLVVAEHNGESLTGGTLSAITAASKIGGDVTVLVAGSNSANVAQAAASVQGVKSVLHADAAQFDHSLAEEITSLVVTVQKASNFTHIVAPSSNISKNFLPRVGAALDVSPFTDVLAVVDENTFQRPMYAGNAIATVTSSDAVKLLTVRPTGFDKAATTGGAGAVSAAPAAPV---AGLSRFVSEETSSSDRPDLTSARVVVSGGRGMKSGENFALLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDGEAPIFQVADYGLVEDLFNAVPELTEKI 328
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: A0A8K1FT05_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT05_PYTOL)

HSP 1 Score: 369 bits (947), Expect = 2.030e-120
Identity = 197/316 (62.34%), Postives = 246/316 (77.85%), Query Frame = 1 
Query:   28 RHASTLVVAEHDNTNLSSSTLSAVSAAGMIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            R  STLV+AEH+   ++  TLS ++AA  I  DVT+LV+G +A+GVAQ AAK++GVS VLH         +AE+VT  ++A Q   ++SHI+A S+ A KN++ RLGA+L  +P++DII V D +TFVRP YAGNA+A V+SSD +K++TVRPT F+K A  GG+A + +A    +   AG T  VSE +S   RPDL +ARVV+SGGRG+K+GE+F+ML +LADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+A GISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLVADLF AVPEL  K+
Sbjct:   15 RSFSTLVIAEHNQKEVTGGTLSTITAASKIGNDVTLLVIGSQAEGVAQAAAKIAGVSNVLHAKDAKFDHLIAEDVTELLLATQKEKNFSHILAPSSNASKNYLPRLGAKLDSAPISDIIAVADKDTFVRPTYAGNAIAQVKSSDAVKLITVRPTGFEKAAVEGGSASVSAA---PEAAAAGKTQFVSEEVSKSERPDLGSARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 327
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: A0A4D9DEZ9_9STRA (Electron transfer flavoprotein subunit alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEZ9_9STRA)

HSP 1 Score: 369 bits (946), Expect = 5.130e-120
Identity = 206/320 (64.38%), Postives = 252/320 (78.75%), Query Frame = 1 
Query:   25 TRHASTLVVAEHDNTN--LSSSTLSAVSAAGMIKGDVTVLVLGHKA-DGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            TR ASTLVVAEH  +   LS STL  ++AAG ++  VTVLV G K  + VAQQAA+V GVSKVL  +H A+ + +AEN+++A+VA   AG YSHI+A S+M  KN+V R+ A L   P+TD+I + D  TFVRPMYAGNA+ATV +S+PLK+LTVR TAF+K  ++GG+A  E A P     +AGL++ +SE++S  +RP+L++ARVV+SGGRG+K  EHF+MLE LADKL GAVGASRAAVD   +PNELQVGQTGKVVAP+LY+AVGISGAIQHLSGMKDSK IVAINKDKEAPIFQ ADYGLVADLF AVPEL  KV
Sbjct:   26 TRDASTLVVAEHSESKGTLSPSTLCTITAAGQLQNPVTVLVAGGKGINAVAQQAAQVPGVSKVLVAEHAAYEKGIAENLSQAVVATHKAGDYSHILAPSSMHSKNYVPRVAALLDSQPITDVIAIKDQATFVRPMYAGNAIATVTTSEPLKILTVRTTAFEKAPSTGGSAATEVA-PAVAKPEAGLSAFLSESVSQSARPELSSARVVISGGRGLKTKEHFQMLEALADKLKGAVGASRAAVDEFHMPNELQVGQTGKVVAPDLYLAVGISGAIQHLSGMKDSKVIVAINKDKEAPIFQVADYGLVADLFKAVPELTDKV 344
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: A0A485KD61_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KD61_9STRA)

HSP 1 Score: 365 bits (938), Expect = 4.900e-119
Identity = 204/324 (62.96%), Postives = 240/324 (74.07%), Query Frame = 1 
Query:    4 YVRQWASTRHASTLVVAEHDNTNLSSSTLSAVSAAGMIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            + R   ++R ASTLVVAEH    L+  TLSA++AA  I GDVTVLV G     VA++AA V GV  VLH D       +AE +T  +V +Q A S+SHI+A S+   KNF+ R+GA L  +P TD++ V+D+ TF RPMYAGNA+ATV SSD +K+LTVRPT F+K   +GG+A + +A        AGLTS VSE  S   RPDLT+ARVVVSGGRGMK+GE+F +L  LADKL GAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD EAPIFQ ADYGLV DLF  VPEL  K+
Sbjct:    9 FARVSNASRFASTLVVAEHAGQKLTGGTLSAITAASKIGGDVTVLVAGSNTADVAKEAAAVQGVKSVLHADAAQFDHAIAEELTSLVVTIQQASSFSHIVAPSSNISKNFLPRVGAALDVAPFTDVLAVVDENTFQRPMYAGNAIATVTSSDTVKLLTVRPTGFEKANATGGSASVTAAPAAPA---AGLTSFVSEETSSSDRPDLTSARVVVSGGRGMKSGENFGLLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVADYGLVDDLFKVVPELTEKI 329
[Close]
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Match: H3HBC2_PHYRM (Electron transfer flavoprotein subunit alpha n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3HBC2_PHYRM)

HSP 1 Score: 363 bits (931), Expect = 5.710e-118
Identity = 194/313 (61.98%), Postives = 240/313 (76.68%), Query Frame = 1 
Query:   37 STLVVAEHDNTNLSSSTLSAVSAAGMIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRAIVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFVRPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGVDAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV 975
            STLVVAEH+ + +S +TL+ V+AA  I GD+T+LVLG +A   A+  AKV+GV  VLH     +  +VAE V   +VA Q AG YSH++A S+ A KN++ R GA+L  +P++DI+ V D +TF RP YAGNA+A V+S D +K++TVRPT F+K A  GG A   S +P  +    G TS VSE +S   RPDL +ARVV+SGGRG+K+GE+F++L +LADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+A GISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLV DLF+AVPEL  KV
Sbjct:   21 STLVVAEHNQSQISGATLATVTAATQIGGDITLLVLGSQAGPAAEAGAKVAGVKNVLHAADAKYDHYVAEEVAELLVAAQTAGQYSHVLAPSSNASKNYLPRAGAKLDVAPISDILAVADKDTFFRPTYAGNAIAQVKSKDAVKLITVRPTGFEKAAAEGGNA---SVSPAPEAPTVGKTSFVSEEVSKSERPDLASARVVISGGRGLKSGENFELLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVDDLFNAVPELTEKV 330
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig910.19.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFY6_9STRA3.490e-13970.09Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A2D4CIU3_PYTIN2.000e-12363.19Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A5D6Y5S8_9STRA3.350e-12362.70Electron transfer flavoprotein subunit alpha n=1 T... [more]
K3WS82_GLOUD8.540e-12362.15Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A067CIA0_SAPPC9.320e-12263.69Electron transfer flavoprotein subunit alpha n=4 T... [more]
A0A6G0XJ74_9STRA1.320e-12165.19Electron transfer flavoprotein subunit alpha n=2 T... [more]
A0A8K1FT05_PYTOL2.030e-12062.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9DEZ9_9STRA5.130e-12064.38Electron transfer flavoprotein subunit alpha n=2 T... [more]
A0A485KD61_9STRA4.900e-11962.96Electron transfer flavoprotein subunit alpha n=1 T... [more]
H3HBC2_PHYRM5.710e-11861.98Electron transfer flavoprotein subunit alpha n=23 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig910contigA-nodosum_M_contig910:128718..136754 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog36331.EPrPI00000020413
PFAMsETF,ETF_alpha
Model size1852
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.32e-118
EggNOG OGsCOG2025@1|root,KOG3954@2759|Eukaryota,1MC0T@121069|Pythiales
DescriptionElectron transfer flavoprotein subunit alpha, mitochondrial. Source PGD
Cds size867
COG categoryC
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig910.19.2prot_A-nodosum_M_contig910.19.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig910 129592..136643 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870365.058952-UTR-A-nodosum_M_contig910:128717..1295911680870365.058952-UTR-A-nodosum_M_contig910:128717..129591Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig910 128718..129591 -
1680870365.1980803-UTR-A-nodosum_M_contig910:136643..1367541680870365.1980803-UTR-A-nodosum_M_contig910:136643..136754Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig910 136644..136754 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870365.144821-CDS-A-nodosum_M_contig910:129591..1297981680870365.144821-CDS-A-nodosum_M_contig910:129591..129798Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 129592..129798 -
1680870365.1563942-CDS-A-nodosum_M_contig910:130264..1307591680870365.1563942-CDS-A-nodosum_M_contig910:130264..130759Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 130265..130759 -
1680870365.1737094-CDS-A-nodosum_M_contig910:131044..1311461680870365.1737094-CDS-A-nodosum_M_contig910:131044..131146Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 131045..131146 -
1680870365.1852686-CDS-A-nodosum_M_contig910:136580..1366431680870365.1852686-CDS-A-nodosum_M_contig910:136580..136643Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig910 136581..136643 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig910.19.2

>prot_A-nodosum_M_contig910.19.2 ID=prot_A-nodosum_M_contig910.19.2|Name=mRNA_A-nodosum_M_contig910.19.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=289bp
MIKGDVTVLVLGHKADGVAQQAAKVSGVSKVLHTDHPAHGRWVAENVTRA
IVAVQAAGSYSHIIALSTMAGKNFVGRLGAELGCSPVTDIIQVLDDETFV
RPMYAGNAVATVRSSDPLKVLTVRPTAFDKPATSGGAAPIESATPTEQGV
DAGLTSVVSEAMSGGSRPDLTAARVVVSGGRGMKNGEHFKMLERLADKLG
GAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKD
SKCIVAINKDKEAPIFQAADYGLVADLFDAVPELESKV*
back to top

mRNA from alignment at A-nodosum_M_contig910:128718..136754-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig910.19.2 ID=mRNA_A-nodosum_M_contig910.19.2|Name=mRNA_A-nodosum_M_contig910.19.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8037bp|location=Sequence derived from alignment at A-nodosum_M_contig910:128718..136754- (Ascophyllum nodosum dioecious)
AGATACGTCCGTCAATGGGCGTCAACGCGACATGCGTCTACGCTCGTAGT
CGCTGAACACGACAATACCAATCTTAGTTCAAGCACTCTGAGCGCCGTCT
CGGCGGCGGGAATGATCAAAGGAGATGTAACTGTGCTTGTTTTGGGCCAT
AAAGCTGATGGTGTGGCGCAGCAGGTGATGAAGTGAACTATTGTTTAAAG
AAAAATCAGAGCACACCTAGACCTTCTGAGCATCCCCCGGTTATGGGGGA
AATGTACACGAAATACATTACAGAGTTCAATCTGAAGTTTCATACGAATT
TGAAAATTATCGAAATAAAATACCGGTACATGTAAAAAATTACGATTCTA
AATTATACTCCAACATGCCGGAGTATGATATATCCGATAAAGGCGCACAC
ATGGAACATTGAATTCTCGAAAGCTCTCCCATTTTACTCCGTACTACTCG
TACAGTAGTCTAAATACTAAATACAATACTAAATACAGTACTGTATACAG
TAAGTACAATAGTTGAACAGTAAAACCTTACGGCGTGATCATTCCCAGAG
CAGGTACAGCGGATGCTTGAAAGTCTCATGTACTGTATCCAAAGAAGCAC
TACAGACGGCAGCCACTGAATGCATGAGGTACATTATTAATATCAATATC
AATATCAATATCAATCTAATAAGAAACGCCCCATTTGCCCTTTCTCTCAC
TCAACAAAAACCTTTCGGCTTTAATTCCCGCCTTGGTCATAACATACGGG
CAGCAAAATGGGGGTGTGGATGCACGAAAGGTTTACTTTGAGCAGGGCTC
TTGACGGTACTTTTTCTTTCTTTTTTCTTTAATCTCACTTATAGCCGATG
GACCTCATCATTACCATCCTGCCTGTGGTCACTAAGGATCTTCCCATCTC
TCCCCGGTTCACGCCTTTCGTTTTTTTATCGCGATGCAAGTTCAGCTCTC
TTACAACTCGTCAACCAATGGTTGAATTTTACTTACTCACGTTCCCACGC
TTTCCGTTACGAAAGAAAGAACACAGATCCTACTTTGGTAAGAATCGTAC
TCACGACTTCCGCACTAGCAGGTGTGCAGGTTAACTACTAGACCACTCGG
GCGACGACTGTTACTGTTTGTACACTTTTTTATTCGGTACAAATAATTGT
TATTTATGGTTTCCAAGCACCACGGGTTCAAATGGTTCGCGGTTATGGCT
TTCACATTATCGCAGTTGAAAATGGACGGTTCCGGAGATTCTCGGTTTGC
TGCGGTCCGGTTTCCGGTTCCGGGTTAAGTCTGCGGTTTGGTTGCGGTCC
GGTTTACGGTTTCAGGTTAAGTCTGGGGTTTGATTGCGGCCCGGTTTGCA
CTCAACAACAGCTCTCTTCCCGAACTGCGACATCTCCCGTGCCTTCAAAT
TTGTAGGCATGTATTCGCCGCTTCGTACCCACTCTTCTATCTTTCGACAT
CGACTGTCTTCCCAGCAGCCGCCTCTTGTGCCGATTACACATCCTGGATG
CGTATTGGCTGTGTCTTTCTTGCGCCGCAATGACGGCGTTGTATTTTTGC
ACCTCAGGTAAGCATCTCTGGTTTAACTTCAGGAACATCATCTGCTCCAC
CTGGAATGGACTCATGCGCACCCGCAAGGTGCCAATCAAAACAGACAGCG
AAGAGAAGTTGCACTCCGCTTGGCACCTGGTCGCCTCGACCCCGTGGTAA
CGACGGGTGAGGAGTGCTAGATGCAGCAGATCCGGAGGCGCCACAAGCTC
GTCCGTGCCCTGAGCAAGCGTCAGCTCGCTCTTGCCGAGCCAAAAATCTG
GCAGCGAAAAGCTGCACATGTCTGCCTCGACGTGTTGCCCTCGAAAGGTT
GTTAGTTCCTGTTTAAGGGCGACGTGGTGCGTCACAGGTTGCGCCCCCCC
CTGTGCTCAATGTGAACCATTTCTATGTCCAACTGCAGCCAGTCGGGCTA
GGCGTCTTTGCTCCATACCATTACTATTACTGAGGGCATCCGCGGCAAAG
CTGCGGCCGGGTCAAACCGCAAGCTGGCGCAGGGGGCGGAGCTGGGGCTG
CTGCAGGGGCTGGTGTCCTGCTAGAATTCTGCAGCTCTTCGATGCCCGAA
ATTGGTAGTACAATCGTTTGAAGCACATAACCGCCGCCAATACAATCTTC
CTCGGACATCCTTTTTTTCGTCCTTGGATCGAGAAAAACGCGAAACACGC
TGCTGGTGCGCTTAATTGGGTTCAACGCACGGCTTTATTTTCCCATGATT
GGAGACCTCTACCTTACCCCGCACGGAGCATTCAAGTATTTCCCAATGTC
CCAATGTCCTCATGTCCCAATGGGTAGTGATAATTGCTGCATCACTTTGC
ATACCCATAAGTTCCTCTTTCTTTTCCTCGTCGGAGAATCTCCAAAAGTC
ACCGTAGCGAGGTTTATTTTCTTCTGTTTGCGTGCTCCTGAACGGAGAGT
ATCGCACAGCGAAATGGTGGCCTCGCTATGCCGTCCCTTATCCGTGCAAG
GTGCAGGGGGATCGTTGCTTTGGCTCATGTTCGTGGCTCTCTCCACAGAC
CACAAAATTCAATACCATGTCTCTAACTTGTCAGGCAGCACTTTGCTCTG
TTTCACCTTTGGCCACCCTATATGAATACTAATGCCTTTCTGTATCACAC
ATTAACATATACACTACATACCATTAGTGGGTGTGAGAAAAAGAGAGATG
CACAGAAAATGAACCATCATGAATAGTGGAACCTGAAAAGGGAGCACCCG
TTGCTGGAACTACCTTAAGGACTACTGGCCCTGTGCCGGCGGACTCTCGG
TAGGGAACGCCATCGGTAAGCAATTGCGTGACCCGATTAACTTGGGACTG
ACCCGTTGGTGGTTGACGGAATAAGTCGAAGCCGTCGCGGAAATCGGGAG
GAATCCCGTGAGTAAGCACCAGATTAATGATTGATGATTCAGCCTTAGTG
CGGAGAATGAACGGGCTGACGGGAAACGGGACGGCCGAACCCGTCTCGCG
AGACCAATTTCTCAGGCGCGAACGGAGACAGGGAAATATTCATTTTCCCC
GTTTAGCTGTCCACGAGCAGAATTGGTAACCTTGCCCGGTTGATCCTTAC
TCTGCTGAAACTGCTGACCATGCATACATACATACTATTAATACTGTACT
GTAGTGTACTGTAGTGCAGTATGCAAGAGGAGCATTGTAATGATTAAGTA
CCGGATACATGCACGAGTACTAACGTATGTCCTGTAAATCGTACGAAAAT
TGTTAAATTAACTTGTGCAACGTGCCATGACTGGATAACGCAGTAAGGTG
ACCACCGAGAGGTAATATTTTAAATACATATCATTTTCAAAAGTAGAAAT
CGATTAATGGATGCCGACTCCATAATCGACTGAAAAAAATGTAAAAAAGT
GCGTTGCAACTCGAGCGGTAATATCGTAGGAATCAGAACGTTCTCTTTCT
GTTTGAAATAGCGCAGGAGGTCGGCGTTCTTATCCCAATTTTGTGTGCTG
TATTTGCGAGAAAACAGTGCTTGTGTGCGCGGCGTTTAGCCTCACCGTAC
CGGAGGCCAAGACTGAGATCGTGTGTTTACGCACGAAGGGGATGCCGGGG
TCCACGGCCACATTCAGCGTAGAGGCAGCGGGCCAGGTGTACAACCAAAC
GAACGAGTTCGTATACCTCGGGGGAAACATCAACCACAATGCCGACCTGT
CCATCGAGGTCGACCGGCGCATACGCAACGCATGGTGCAGTTTCCGGAAG
TACACCCTCGAATTGTACGACCGACCGAGCGCTCCCCTCAAGCTCAAGAT
CCGGATGCTAAGAGGGGAGGTTCTCGAGACAATGCTGTACGGCTGCGTCA
CGTTGAGCCCGCGCGCGTGCCACTACGACACGCTGCGCTGAGCCCACCAC
AGGTTCTTGGCTTGCTGCATCGGTTGGCGAAAGAACAATCGCGCCGACCA
CCCGATTTCCTATCTGGACACGCTTGTTAAGACGGGAAGTGAGAGCATCG
AGGCGACTTTACGCAGGATGCGGATCTTGTTCGCGGGATTTGTGGCGCGC
ATGGAGGATACGAGACTCCCGAAGTGCGTGATGTTCGGAGAGTTGGTGGG
GGGCGCGGACTGTGTGGGGGGCCAGGAAAAATAGTGGATGGGGTGTTTCC
TCGACGACCTCAGAGCTTTCGGCATCAACGCCGGCCAGTGGACGACTGCA
GCCCAGGACGAGGGGGAATGGCGCAGAACGGCGGAACAAGGGGCGGAATA
TTTCATGACGAAATGGATCGTTGCAGAGAAAGCCAAGGCTGGACTACGGC
ATGCAGTGGTATGCCCGAACGTGACGGGAAGGACCAAGGAGAGGATAGCC
CAAAGCAAGCGGGCTTGTGCTGGTTCGCTCGCCCTCGCTGACTAGCCACA
AGTGGCGCGAACTTGTATCCTCCGGGCGTTTGGTTTGCAGATGCCATGAC
GTCTTTCTGTGGTGTTACGTTTGTTTTGTTTTGCTTCGTGTTCGTCTTTA
TGCTTTCGTTGGAGCCGCGGCCCTGCGTTCAATTGTCCTTCGATATGCAG
GCGCCCCGATAGCCACACGTGCTTCTTTCTTTCTTTCTTTCTTTCCCTTT
TGTTTATTTGGAATGTCGCTTTTTCCGAGTATTTTTTTTGTACCATTGCC
GCTTTCTCTTTGTATGGAGAGTACGTCGTACGTTCTTTCCTTCCGAATGG
TGTTTTTCTACCTTGTAACCACGGGCTGGATTTTTGGCATCAGCTTATGT
GAGAGTTCAATCAAAATCAATCATCACTCATCCCAAACTGACCCCAATGT
TGCAATGTTGTTGGTCTTGTATCTTGTGTCTTGTATCCCCCCACTACGTT
GTTTTTTTAAGGTCATTAATTAGGTCATGAGGTCATTAGGTCACTGGTAT
CAATCCGCGCTCGTGTAATTCAATAACTGTACAGCACGGCTTCTTCCGCT
CGTTCCCGACCGAGTGATGAAGAAGAGGACAGTAGCTCTACAAATTACGA
CGTTGGCAACACCAATGCGATGTCCATTCTAGTGCTAGTGCTATGAAATA
CTGCTACTGTAGAGCTAGTTAACAGTTATATTGCAATATAATCAGTGGTG
ATAGGTGCAGATTGTCATTGCCATTCGGTCCAATTCTAGATATAAAAGCC
TTTTCGTACTTCCGGAAACAAAATGTGTGAATCGATAATTTTTTTACAAA
GTCCGCCGAAACTCAAAGGCCGTTGTCGAATTTTCCCAAGGTGTCCATTT
TGGACCGCAAACGATTGGGAAAAGGCACCAAAGGTACCCCAGTGAAGGGC
ACCTTATTTATACTGTATTGTACTGTACCCACGGCAAGCCAAATACTTCG
TATTAAATATTACAGAATGACTTGTACAACAGAAGAAAGAAGCAAATCCA
TACAAAATAATATAGCTCTCTACATATTAGGATATCCATAGAATTTGGGA
GCTTACAACGTTCAACCCTAGTAAGAAGTACGGTATCTTGTATTAATTAT
TAAGTATTACTAGAAGTACAATACAGGAAGGTGGGAGATTTCGGCATTGA
CCATCGTCATAATGTTAAAATGTTATAGTCTAATAAATTATGGCGATTTG
TTCCGCAGGCAGCTAAGGTGTCAGGTGTCTCCAAAGTTCTTCACACTGAC
CACCCAGCTCACGGCAGGTGGGTTGCTGAGAACGTCACTAGGGCCATCGT
CGCTGTTCAGGTGAGTGAGAATTCTTTGCTGCCGCGTATGTGGACTAGAC
GCAGCAAGCGCCTTCGAACATCGAGCATAGAGTATGGAGCTACTGTGAAA
GCTCGTGAAGAGAGACAATCGGTACGTCGACTGGGATTGATGGAAGTGTA
ATGTAATCTTGACTGCCCAACCCAACCGTGATTGCTGCTGAAATGAAAAT
GGCTGAATCCCAATGTCTGGACATCGATGGAAATATATATTTGAGCGATA
CTTCGTTCTTTCCATCTTCTCTCTTACTATCAATATAAATTCCAGGCCGC
CGGGTCGTACTCGCACATCATTGCCCTTTCCACAATGGCGGGGAAGAATT
TTGTTGGTCGCTTGGGGGCGGAGCTGGGATGTTCTCCGGTCACAGATATA
ATTCAGGTGCTTGATGACGAGACGTTTGTGCGGCCCATGTACGCTGGGAA
TGCCGTTGCGACCGTGCGCTCGTCGGACCCTTTGAAAGTCCTGACAGTGC
GCCCGACCGCGTTTGATAAACCAGCAACTAGCGGTGGCGCAGCTCCTATA
GAGTCTGCGACTCCAACGGAACAAGGCGTGGACGCTGGCCTGACTTCTGT
CGTATCTGAGGCTATGAGCGGAGGGAGCCGACCCGACCTTACGGCGGCGA
GGGTAGTAGTGTCTGGCGGTCGAGGGATGAAGAACGGTGAACACTTTAAG
ATGCTGGAACGGCTGGCGGATAAACTTGGGGGCGCCGTAGGTGCATCAAG
GGCTGCGGTTGATGCGGGGTTCGTTCCGAACGAACTTCAGGTGAAGAACT
TCCAGATCCAAATGTTTGTATTGTTCAGTATTAATTAGTATTTATTAACT
ATCACTAATACTTGAGTACTTGGTAACTTGTATGTCCTGATGGCCGTATA
GTGTCGTGCCATGCGGCGTCTTCAGGAAATGCACTCAGCACGGTCCCTGC
CGTGCCATTCGAAATATATGTGCAAATTGCCGTCGGCTTGAGCTGACGGC
AGGACAATATCGGCAAGTTGCCTTGGTTGCAACAAGGAGTTGATAAGAGT
GAGAGTACATTCTCTGGGTATTAGTATTAGATGAAATGTGTCGCTTTACT
TGGTACTTGCTCCGAACGCTTTTGGGACTGCAATGGCGCTCTTGGGCACT
CCACTCTAGGGTCAAAACGCGTTGGACATAATCAAAAGTTGGTGGAAATT
AACGCGCAGCTAATTATGAAACTCTATGGCGCATCCAACTTTTCGACGCC
TTACAGGTGGGTCAAACCGGCAAGGTGGTTGCACCGGAGTTATACATTGC
AGTGGGCATTTCAGGCGCGATCCAACACCTCTCGGGGATGAAAGACAGCA
AATGCATCGTAGCCATCAACAAAGACAAGGAGGCGCCGATATTCCAGGCA
GCAGACTACGGACTCGTTGCTGACTTATTCGATGCTGTGCCTGAGCTTGA
GTCCAAGGTCTGAAGGGGCATCCCTAGCCATTTTATTTAGACTTTGTGTT
GAAAATATCTGCTATTAATATGCGTTCGCCCCGGTAGCACAGTTGGTAAC
CTCGTAACCTTCTGACATGTTGGGACGTGAGTTCGAATCCCGGTAACTGG
GATTTTTCCTCACTAAAAAATAAGTAAAAATAAACATGCCAAACAAGTGG
AGAACGATTAATTCGTTATTACACAAAATTCGACTTCACGGTCGACGAGG
GAAAGGAACGGCTGAATCCTTCTCGCGATAAAAATAAAGGCATTCACCGC
AGAAGGAAGGTGGATGAGAAATTCTGTGTGACCCGGTCTGGTACATCCAA
CGAACTTGACGTCCAGAATAAATGGGAAGAAAACAGACACAACATAAATA
TGTGATAACTGGTCGATGCCCGTTCCTCTGGTTCCTCTGTTCGTGTTGAC
GGTAAAGATAAAGGTCATTATCAACATGAACACACACCGCGCCCCCGAAA
GGTACAAAGGTACAGGGGCGGGAGACAGCAAGTACCTTCCTTATGTACGA
ATCTCCTGTTTCAAAACGTATCTGTATTATGTGATTATTATTAATACTAG
TAGCTACGAAGCCGTGTGGTGTAATGTTCTTCCTCGTCCAGGTTTGTTAT
TATTAGTTGAAATACCGAACCTGGCTCTAGGTGACAGGGAAAAGTTGAAA
AGTGTAAGACTCCAAATTGCGGATAGATCAGTAGATCGCTGTCAGGACAG
GATGCTAGGATGGGTTTCCATATTTGCATTGTGGGATACGTGTTCGGGAT
GCCAGTTTCACTGTTCTGGGAAGCTCCACCTAATAATCAGGATCCTTTCT
GTCCTCAACCCAACGTCTACCAACCCAACACTGCTCC
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig910:128718..136754-

>mRNA_A-nodosum_M_contig910.19.2 ID=mRNA_A-nodosum_M_contig910.19.2|Name=mRNA_A-nodosum_M_contig910.19.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=867bp|location=Sequence derived from alignment at A-nodosum_M_contig910:128718..136754- (Ascophyllum nodosum dioecious)
ATGATCAAAGGAGATGTAACTGTGCTTGTTTTGGGCCATAAAGCTGATGG
TGTGGCGCAGCAGGCAGCTAAGGTGTCAGGTGTCTCCAAAGTTCTTCACA
CTGACCACCCAGCTCACGGCAGGTGGGTTGCTGAGAACGTCACTAGGGCC
ATCGTCGCTGTTCAGGCCGCCGGGTCGTACTCGCACATCATTGCCCTTTC
CACAATGGCGGGGAAGAATTTTGTTGGTCGCTTGGGGGCGGAGCTGGGAT
GTTCTCCGGTCACAGATATAATTCAGGTGCTTGATGACGAGACGTTTGTG
CGGCCCATGTACGCTGGGAATGCCGTTGCGACCGTGCGCTCGTCGGACCC
TTTGAAAGTCCTGACAGTGCGCCCGACCGCGTTTGATAAACCAGCAACTA
GCGGTGGCGCAGCTCCTATAGAGTCTGCGACTCCAACGGAACAAGGCGTG
GACGCTGGCCTGACTTCTGTCGTATCTGAGGCTATGAGCGGAGGGAGCCG
ACCCGACCTTACGGCGGCGAGGGTAGTAGTGTCTGGCGGTCGAGGGATGA
AGAACGGTGAACACTTTAAGATGCTGGAACGGCTGGCGGATAAACTTGGG
GGCGCCGTAGGTGCATCAAGGGCTGCGGTTGATGCGGGGTTCGTTCCGAA
CGAACTTCAGGTGGGTCAAACCGGCAAGGTGGTTGCACCGGAGTTATACA
TTGCAGTGGGCATTTCAGGCGCGATCCAACACCTCTCGGGGATGAAAGAC
AGCAAATGCATCGTAGCCATCAACAAAGACAAGGAGGCGCCGATATTCCA
GGCAGCAGACTACGGACTCGTTGCTGACTTATTCGATGCTGTGCCTGAGC
TTGAGTCCAAGGTCTGA
back to top