mRNA_A-nodosum_M_contig91.23.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A2N9IUC8_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUC8_FAGSY) HSP 1 Score: 332 bits (852), Expect = 3.970e-99 Identity = 252/747 (33.73%), Postives = 377/747 (50.47%), Query Frame = 1
Query: 4 TPQYNGVAERALGILRE--KAIILMEELDDVINVPREKLWAQAILFACDVTNKSVTTSTDGSKSPYELWFGNFPTADHLRPFGAVGYARQGVREHKMAPKGEKCVFMGIPR--------NFPLARNIVERQAV----QWIDGPKKTGGDGTGSDDRGMK--SAGDEIIVERGTPQLNVQE-------LGQEQQLTLHEHETQKALSELEGDALACDDGGPMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIP----------------------------------EEFQEFPGAQAKADPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTK--IPAASGVSTLSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGQGCELCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQ-VQEF-MEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDSQKFYKH 2061
TPQ+NGVAER L + ++++ M EL W A+ A + N+ T S + PYELW G P+ +H++ +G + R+ + K+ P+ ++C+F+G P+ N + V R A+ + +T +DR M S +E V T N+QE + +LTL + ++E D D P+ Q +AM ++ + W+KA E+EM M N V+ V +P+ +G K +YKRK+G GKVE YK RLVA+ + Q G+ Y E +SP SIR+LL++AA D E+ D + AFL +I EEIY++ P E + F +Q +PCV++KV G + +++++DDIL D M L F +KD+G+A Y +G + R+RK R L Q Y++ ++ RF ++ + K P GV LSK P+ EE+E+MR PY AVG+LM+ TRPDI AV V+R+ NPGP H AV I +YL TK + + +G + +L ++ YTDSDF + +D R+S+SG V L KGAISW S Q+ TA T EAEY+A SE KEA+++R+ +QE + PS+ + + DN GA A A +RTKHI+ + HL+RD V + ++ S + AD TK L + F KH
Sbjct: 114 TPQHNGVAERRNRTLLDMVRSMMSMSELP-------VSFWGYALETAIYLLNRVPTKSVPNT--PYELWTGKKPSLNHIKIWGCPSHVRKSNVD-KLGPRSDRCLFVGYPKMSTGFYFYNPSEQKVFVSRNAIFLEEDYSLNESRTKVTLEEQNDRPMTVPSENNEEQVIVPTEPSNMQEPRRSTRIIRPPVRLTLLNE-----IYQMESDGF---DNDPVTYQ------------EAMNDKDVEHWKKAMESEMDSMYTNQVWTLVDKPEGIKPIGCKWIYKRKLGPTGKVETYKVRLVAKGYTQKAGIDYEETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNIREEIYMDQPVGFISHGQESKVCKLMKSIYGLKQASRSWNIRFDEAIKSFGFSQNIDEPCVYKKV-SGRIITFLILYVDDILLIGNDVGAMSSIKMWLSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFSPFRHGVH-LSKNMCPKTQEEREKMRNCPYASAVGSLMYAMLCTRPDICYAVSIVSRYQSNPGPEHWTAVKHILKYLNRTKHYFLVFGSK--DLNIQGYTDSDFQSDIDDRKSISGFVFTLGKGAISWRSCKQDTTADSTIEAEYIAASEAAKEAVWIRKFIQELGVVPSIE-SPITIHCDNNGAIANAVEPRAHKRTKHIERRFHLIRDIIHRGDVEITHIASANNVADPFTKALPQKVFEKH 825
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A438FEW0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FEW0_VITVI) HSP 1 Score: 321 bits (822), Expect = 4.950e-92 Identity = 237/760 (31.18%), Postives = 380/760 (50.00%), Query Frame = 1
Query: 4 TPQYNGVAERALGILREKAIILMEELDDVINVPREKLWAQAILFACDVTNKSVTTSTDGSKSPYELWFGNFPTADHLRPFGAVGYARQGVREHKMAPKGEKCVFMGIPRNFPLARNIVERQA-------------------------VQWIDG-----------PKKTGGDGTGSDDRGMKSAGDEIIVER-GTPQLNVQELGQEQQLTLHEHETQKALSELEGDALACDDGGPMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDG-KVEKYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQE-------------------FPGAQAKA---------------DPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGVS-TLSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGQG-CELCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQVQEFMEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDSQKFYKH 2061
TPQ NG+AER + E+ ++ + + WA+A A + N+S +++ K+P E W G HL+ FG Y + K+ P+ KC+F+G P+ + +E Q V+ +D P+K S + K+ +EI+ ER P ++ + + + K + E A A +++ + EP+ ++A+ S E D+W KA + EM + +N ++ V +PKD+ VVG+K ++KRK G G + +YK RLVA+ F Q EGV Y E +SP +SIR+LLA A +D EL D + AFL ++DE IY++ PE F E P K D CV+ K+ + + + +++++DD+L K+K +++ L +F++KD+G A +G I R+R R L+ Q+ Y+ ++ RF++ + G LS T P EEK M + PY VG++M+T +RPD+A AV ++R+ PG H +AV +FQYL T+ G+ YGG E ++ + D+D+ +DTR+S++G V + GA+SW + +Q V A T+EAEY+A++E VKEA++L+ + E E +M G V V+ DN+ A LA N+ R+KHIDV+ H VRD A ++ V V ++D +D+LTK L+ KF KH
Sbjct: 511 TPQQNGLAERMNRTILERVRCMLSS-----SGLSKVFWAEAAETAVHLINRSPSSALQ-FKTPQEKWTGKAADYQHLKVFGCTAYVH--TKTDKLEPRAVKCIFLGYPKGVKGYKLWIETQGKGKCIISIDVTFNEQDMSKQTPAKDVEGLDQLQFEVEHETLQPEK-------SKETSSKTTQEEIVHERQNEPTQGLESYNLVRDRQKRQVKPPKRYGQAEMTAFA------LSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKHSSIRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPEGFGEGIKDGQVCLLKKSLYGLKQSPRQWYKRFDKYMLDIGFNPSSHDGCVYFKLTEDSM-VYLLLYVDDMLVACKEKRHLEQVKEMLKAEFEMKDLGSAKRILGMEIERDRSKRVLRLSQNSYISKVLSRFEMNNVKTVSTPLGQHFRLSITQAPETHEEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRYMSCPGKPHWQAVKWLFQYLAGTRSLGLVYGGNSQLETQLQGFVDADYAGNIDTRKSLTGYVFTVFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIWLKGITE--ELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKF-KH 1245
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A2N9H9J3_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H9J3_FAGSY) HSP 1 Score: 312 bits (800), Expect = 2.550e-91 Identity = 232/759 (30.57%), Postives = 372/759 (49.01%), Query Frame = 1
Query: 1 DTPQYNGVAERALGILREKAIILMEELDDVINVPREKLWAQAILFACDVTNKSVTTSTDGSKSPYELWFGNFPTADHLRPFGAVGYARQGVREH-KMAPKGEKCVFM------------GIPRNFPLARNIVERQAVQWIDGPKKTGGDGTGS-------DDRGM---KSAGDEIIVERGTPQLNVQELGQEQQLTLHEHETQKALS----------ELEGDALACDDGGPMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQ----------------------------------EFPGAQAKADPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKI--PAASGVSTLSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGQGCELCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQ-VQEFMEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDSQKFYKHTK 2067
+TPQ NGVAER L + +M + N+P W A+L A + N+ + S S +PYELW G P +HLRP+G+ G+ ++ K+ P+ K +F+ G N + +E + + +I+ + GD +D G S G ++ + + +L +TL + + +S E+EG+ L CD D+ EP + +A+ S + DEW A + EM M +N V++ V P + +G K + K K DG +++YK RLVA+ + Q EG+ Y + +SP ASIR++L++ A +D EL D + AFL ++DEEIY+ P F+ F + D CV+ K + +++ +++DDIL D ++ L F++KDMG+A + +G ITR+R + L Q Y++ +++RF + + I P G TLS P+N EEK +M K PY A+G+LM+ TRPDI AV V+R+ NPGPAH +AV +I +YL T + + Y G +L + Y+D+D+ + D R+S SG +L GA+SW S+ Q A T E+EYVA S V+EA++LR+ +Q + AV ++ D+ A A + + KHI++++H +RD +V + ++ + AD LTKP+ F+ HTK
Sbjct: 128 NTPQQNGVAERRNRTLLDMVRSMMAQA----NLPIS-FWGDALLTAAYILNRVPSQSV--SSTPYELWKGEKPNLEHLRPWGSAGFVHSTAHKYGKLGPRARKHIFIRYSDSSKGYVMYGEHPNGGMTE--IESRDIDFIETDFPSIGDANRDLDLYELEEDEGTLPSSSEGGGLVPRPVIAEDSGSDLQPSGSITLDQDSQARRVSSRGHIPRRHFEIEGNVLLCD---------AKDVDEPASFSEALHSPDRDEWMTAMQEEMSSMDKNNVWELVDLPPGRKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEAKGHERKVCRLKRSIYGLKQSSRQWYLRFHDSITSFGFEMIEEDHCVYLKRSKRSI-LILSLYVDDILLAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGC-TLSLDQCPKNDEEKNQMSKVPYASAIGSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCY--HGGDLRLTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVWLRRFLQRLGVTAHAEDAVLLYSDSTSALAYAKDPKYHGKAKHIELRYHYIRDMVSQGEVILQHISTGSMVADPLTKPIARDLFFSHTK 864
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A438K5H3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K5H3_VITVI) HSP 1 Score: 311 bits (796), Expect = 4.570e-91 Identity = 232/744 (31.18%), Postives = 376/744 (50.54%), Query Frame = 1
Query: 4 TPQYNGVAERALGILREKAIILMEELDDVINVPREKLWAQAILFACDVTNKSVTTSTDGSKSPYELWFGNFPTADHLRPFGAVGYARQGVREHKMAPKGEKCVFMGIPRN-------FPLARNI--------VERQAVQW--------IDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLN-----------VQE------------------LGQEQQLT--LHEHETQKALSELEGDALACDDGGPMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAQAKADPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTK--IPAASGVSTLSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGQGCELCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQ-VQEF-MEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDSQKFYKH 2061
TPQ+NGV+ER L + +M D +N LW A+ A + NK T + S +PYE+W G P H++ +G Y ++ ++ K+ + +KC F+G P+ PL + +ER+ + +D ++ + T + + M+ V + T +L VQE L Q QQ +HE + + + D L ++ + + +P+N +AM+S + ++W++A E+E+ M N V+ V KD +G K +YK+KIG DGKVE YK RLVA+ + Q EG+ Y E +SP SIR+LLA+AA D E+ D + AFL +PCV+++ G + +V+++DDIL D M L ++F +KD+G+A Y +G I R+R R L Q +Y+++++KR++++ + + +P +GV TLS+ D P+ PEE+E M + PY AVGA+M+T T TRPD+A A+ +R+ NPG H K V I +YL TK+ + YG EL ++ YTD+ F + D +S+SG V L GA+SW S Q A T+EAEY+A SE KEA+++++ + E + PS+ + + DN GA A + +++KH+ ++HL+R+ + V++ + ++ AD TK L +F KH
Sbjct: 114 TPQHNGVSERRNRTLLDMVRSMMGFTDLPVN-----LWGYALEAAAYLLNKIPTKTV--STTPYEIWKGRKPNLKHIKVWGCPAYVKK-LQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLAEGSHGKEIELDETQEETNETTAAQEHEMEFEQPFFDVLKSTQRLQSPTIVAPEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIHEPLRRSSRAHRAPDRLNLMVQDDLSNEVHHNDDDPKNYEEAMQSLDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNE------------------------EPCVYKRF-SGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGES--ELKLKGYTDASFASDKDDSKSISGYVFTLNGGAVSWKSSKQATVADSTTEAEYIAASEAAKEAVWMKKFISELGVVPSIEE-PIPLLCDNNGAIAQAKEPRSHQKSKHVLRRYHLIREIIERGDVKIEKIDGKENAADPFTKALGITQFDKH 820
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A2N9J3H7_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J3H7_FAGSY) HSP 1 Score: 306 bits (783), Expect = 8.010e-89 Identity = 222/732 (30.33%), Postives = 371/732 (50.68%), Query Frame = 1
Query: 1 DTPQYNGVAERALGILREKAIILMEELDDVINVPREKLWAQAILFACDVTNKSVTTSTDGSKSPYELWFGNFPTADHLRPFGAVGYARQGVREH-KMAPKGEKCVFMGIP---RNFPLARNIVERQAVQWIDGPKKTGGDGTGSDDRGM--KSAGDEIIVERGTPQLNVQELGQEQQLTLHEHETQKALSELEGDALACDDGGPMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQ----------------------------------EFPGAQAKADPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKI--PAASGVSTLSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGQGCELCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQ-VQEFMEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDSQKFYKHTK 2067
+T Q NGVAER L + +M + N+P W A+L A + N+ + S S +PYELW G P +HLRP+G+ G+ ++ K+ P+ K +F+ + + + ++ E ++ +G + +G G R + + +G ++ + + + + + Q ++++ H ++ E+EG+ L CD D+ EP + +A+ S + DEW A + EM M +N V++ V P +G K + K K DG +++YK RLVA+ + Q EG+ Y + +SP ASIR++L++ A +D EL D + AFL ++DEEIY+ P F+ F + D CV+ K + +++ +++DDIL D ++ L F++KDMG+A + +G ITR+R + L Q Y++ +++RF + + I P G TLS P+N EEK +M K PY A+G+LM+ TRPDI AV V+R+ NPGP H +AV +I +YL T + + Y G +L + Y+D+D+ + D R+S SG +L GA+SW S+ Q A T E+EYVA S V+EA++LR+ +Q + AV ++ ++ A + + KHI++++H +RD +V + ++ + AD LTKP+ F+ HTK
Sbjct: 47 NTLQQNGVAERRNRTLLDMVRSMMAQA----NLPIS-FWGDALLTAAYILNRVPSQSV--SSTPYELWKGEKPNLEHLRPWGSAGFVHSTAHKYGKLGPRARKHIFIRYSDSSKGYVIDLDLYE---LEEDEGTLPSSSEGGGLVPRPVIAEDSGSDL---QPSGSITLDQDSQARRVSSRGHIPRRHF-EIEGNVLLCD---------AKDVDEPASFSEALHSPDRDEWMTAMQEEMSSMDKNNVWELVDLPPGHKTIGNKWVLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKIAFLNGELDEEIYMAQPAGFEAKGHERKVCRLKRSIYGLKQSSRQWYLRFHDSITSFGFEMIEEDHCVYLKRSKRSI-LILSLYVDDILLAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGC-TLSLDQCPKNDEEKNQMSKVPYASAIGSLMYAMLCTRPDICFAVGMVSRYQSNPGPTHWRAVKRILRYLRGTSDHALCY--HGGDLRLIGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVWLRRFLQRLGVTAHAEDAVLLYSNSTSTLAYAKDPKYHGKAKHIELRYHYIRDMVSQGEVILQHISTGSMVADPLTKPIARDLFFSHTK 751
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE) HSP 1 Score: 305 bits (781), Expect = 8.190e-88 Identity = 230/778 (29.56%), Postives = 369/778 (47.43%), Query Frame = 1
Query: 4 TPQYNGVAERALGILREKAI---ILMEELDDVINVPR-EKLWAQAILFACDVTNKSVTTSTDGSKSPYELWFGNFPTADHLRPFGAVGYARQGVREHKMAPKGEKCVFMGIPRNFPL--------ARNIVERQAVQWIDGPKK------------TGGDGTGSDDRGMKSAGDEIIVERGTPQLNVQELGQEQQLTLHEHETQ-----------------------------KALSELEGDALACDDGGPMAMQATLDI-PEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVAR-PKDKLVVGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGA--------------------------------QAKADPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGVSTLSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGQGC-ELCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQVQEFMEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDSQKFYKHTKFI 2073
+P++NGVAER LG+ E A+ I + L + +P+ ++LWA+A+ +AC+ N + ++ SKSPYE+W+G A PF Y + R K+ PKGE C ++G R+ P A I E + V W P + +G SDD +++ E E+ + + +L A D + + D+ PEP + ++A+ S+ W KA E+ G++ + A+ P+ V+ + ++K K + GK+ K K RLVA+ F Q GV Y E +SPT ASIR+++A+A + EL H D EQAF+++ +D E+++++P G Q+ +DPCV R ++ EV ++ +H+DDIL +A K + LG K++G+ +++GC +R+R+A ++ Q Y+ S+++RF++ +T+ IPA S ++ R+ E EE P+RE VG LMW A TRP+ + AVR VAR P + KA KI YL T + Y ++ Y D+DF + RRSVSGA++++A +SW S Q+ + TSEAEY+A+ + VKEALF+ + +F+ P N +S R+KHIDV+HH +R+ ++ + V +V S++QHAD+LTK L F H F+
Sbjct: 223 SPEFNGVAERGLGLTEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYCKW-QRPSKLLPKGESCFYVGPSRDHPRDCHRVLTRAGTIQETRNVTWEALPSQLPPPQPPLPIEVAEEEGEESDDD-VEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESMDXXXXXXXXXXXXXXXVEVEASPPAARRPQHVVDLADFNTAARDAVELPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDIL-YAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPK--------------------NPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEVHRDFV 969
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A6A2Y6W3_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Y6W3_HIBSY) HSP 1 Score: 309 bits (791), Expect = 6.210e-87 Identity = 233/715 (32.59%), Postives = 375/715 (52.45%), Query Frame = 1
Query: 4 TPQYNGVAERALGILREKAIILMEELDDVINVPREKLWAQAILFACDVTNKSVTTSTDGSKSPYELWFGNFPTADH--LRPFGAVGYARQGVREHKMAPKGEKCVFMGIP-------------RNFPLARNI----------VERQAVQWIDG-PKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNVQELGQEQQLTLHEHET---QKALSELEGDALACDDGGPMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGKVE-KYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEF-----QEFPGAQAKADPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTKIPAASGVST---LSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGQGCE-LCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQVQEFMEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTK 2031
TPQ NGVAER L EK ++ + +E WA+A+++AC + N +T T G K+P E WFG P D+ L FG+ Y V+E K+ P+ +K +FMGI + +R++ V + ++ DG PKK +G+ ++ D +VE + + VQ QQ HE+ +K + A D + A D+P N +A++S E +WR A EM + +N +K + PK K +G K +Y +K G K +YK RLVA+ + Q EGV Y E +SP +SIR+LLA+ D EL D + AFL D+DEEIY P+ F +E ++K D CV+ ++ + +++++DD+L ++ + + + +L ++F++KD+G+A +G I+R++K L Q Y+ ++KRF + + +K P ++ ++ L + P++ E+E M K PY AVG+LM+ TR DI+ A+ V+R+ +PG H +AV I Y+L+T + G+ + + + C+ Y DSD+ LD RRS +G V AK +SW S +Q A T+EAEY+A++E VKEA++L+ + E M + V D++ A LA N+ RTKHIDV++H VR+ + V + +R+ + AD+LTK
Sbjct: 560 TPQQNGVAERMNRTLMEKVRCMLSNA----GLGKE-FWAEALVYACHLINHLPST-TIGGKTPLEKWFG-VPATDYDSLHVFGSTTYYH--VKESKLDPRAKKVIFMGITSGVKGYRLWCPETKKIIFSRDVTFDESTMLRKVTSEKLEQTDGTPKKVEFEGSKFVSTSKENDIDSPMVEEESDEEEVQTQEPPQQ-----HESIALRKGKKTIRQPAHYVDMVTFASPIAIDDVPATFN--EAVKSSEHKKWRIAMNEEMQSLQKNQTWKLASLPKGKKAIGCKWVYAKKDGFPDKNNIRYKARLVAKGYAQTEGVDYNEVFSPVVKHSSIRILLALVVQLDLELVQMDVKTAFLHGDLDEEIYTTQPDGFKVAEKEEMKYTRSKYDNCVYLCELEDGSYIYLLLYVDDMLIASRSQTEIAKLKTQLNREFEMKDLGEAKKILGMEISRDKKLGRLCLSQKEYLRKVLKRFGINEMSK-PVSTPLAPHFKLGASMSPKDDAEREYMSKVPYASAVGSLMYAMVCTRSDISQAIGVVSRYMHDPGKEHWQAVKWILWYILNTVDVGLVFQQEKQDGQCVVGYCDSDYAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVALSTTEAEYMAVTEAVKEAIWLQGL--LGELGMEQKHIKVHCDSQSAIHLAKNQVYHARTKHIDVRYHFVREILEESGVIIQKIRTTENPADMLTK 1255
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A8J5YVE7_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YVE7_9ROSI) HSP 1 Score: 298 bits (763), Expect = 1.100e-86 Identity = 230/749 (30.71%), Postives = 389/749 (51.94%), Query Frame = 1
Query: 1 DTPQYNGVAERALGILREKAIILMEELDDVINVPREKLWAQAILFACDVTNKSVTTSTDGSKSPYELWFGNFPTADH--LRPFGAVGYARQGVREHKMAPKGEKCVFMGIP---RNFPL----ARNIVERQAVQWIDGP--KKTGGDG--TGSDDRGMKSAGDEIIVE--RGTPQLNVQELGQEQQLTLHEHETQKALSELEGDALA-----------CDDGGPMAMQATLDIPEPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGKVE-KYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPG----------------------------------AQAKADPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTK---IPAASGVSTLSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYG-GQGCELCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQVQEFMEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDSQKF 2052
DTPQ NGVAER L EK ++ ++ WA+A+ +A + N+ +++ + K+P E+W G PT D+ L FG+ Y V+E K+ P+ +K +FMGI + F L + ++ + V + + KK + TG+ + ++ ++ E R P ++L + E TQ+ LS E A+A D A+ +D P ++AM+S E D+W+ A + EM + +N ++ PK K +G K ++ +K K + +YK RLVA+ + Q EG+ Y + +SP +SIR+LLA+ A + EL D AFL +++EEIY+ PE +++ G ++K D CV+ + + + +++++DD+L +K + +D+ A+L ++F++KD+G+ +G I+R+R+ +L +Q Y++ +++ F V + TK P AS + L+ P+ EE+E M K PY AVG+LM+ TRPDI+ AV V+R+ +PG H +AV I +YLL T + G+ + + + Y DSDF LD RRS +G + LAK +SW S +Q A T+EAEY+A++EVVKEA++L + E + + ++++ D++ A LA N+ RTKHIDV++H VR+ + K+ + + + D AD++TK + + KF
Sbjct: 43 DTPQQNGVAERMNRTLLEKVRCMLSNTG-----LGKQFWAEAVTYASHLVNRLPSSALE-RKTPMEVWSGK-PTTDYDSLHVFGSTAYYH--VKESKLDPRAKKALFMGITSGVKGFRLWCLDTKKMICSRDVTFDESATLKKVADEDIQTGNTPQQVECTPKQVEFEQVRICPVNKSNSPATMEELEVEEVLTQEPLSTPEPVAVARPRREIRRPARFTDMVAYAL-PVVDDDIPVTYQEAMQSLESDKWKSAMDEEMQSLRKNNTWELAQLPKGKRAIGCKWVFAKKDRSPSKKDVRYKARLVAKGYAQKEGIDYNDVFSPVVKHSSIRILLALVAQLNLELAQLDVNTAFLHGELEEEIYMTQPEGYEDAGGINWVCKLNKSLYGLKQSPRQWYKRFDSFMRRQKYTRSKYDNCVYLQKLHDRSFIYLLLYVDDMLIASKSQKEIDKLKAQLNEEFEMKDLGEVKKILGMEISRDRQKGKLCLNQKQYLKKVLQCFGVNENTKHVSTPLASHLK-LNAQLSPKTEEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVGVVSRYMHDPGKGHWQAVKWILRYLLKTVDVGLVFEQDEALGQFVVGYVDSDFAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVAISTTEAEYMAVTEVVKEAIWLNGLLEDL--GVVQSHISLYCDSQNAIHLAKNQVYHSRTKHIDVRYHFVREVFEKGKILLQKIPTTDNPADIMTKVVTTIKF 778
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A2N9HJ76_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HJ76_FAGSY) HSP 1 Score: 301 bits (771), Expect = 2.240e-86 Identity = 235/741 (31.71%), Postives = 365/741 (49.26%), Query Frame = 1
Query: 4 TPQYNGVAERALGILREKAIILMEELDDVINVPREKL-WAQAILFACDVTNKSVTTSTDGSKSPYELWFGNFPTADHLRPFGAVGYAR-QGVREHKMAPKGEKCVFMGIPRNF-------PLARNIVERQAVQWIDGPKKTGGDGTGSDDRGMKSAGDEIIVERGTPQLNVQELGQEQQLTLHEHETQKALSELEGDALACDDGGP-------MAMQATLDIPE-PRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGKV-EKYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAQ-----------------------------------AKADPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDV--KKTTKIPAASGVSTLSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGQGCELCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQVQEFMEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDSQKFYKH 2061
TPQ NGVAER + E A L +N K+ WA+A+ AC + N+S + DG K E+W G +R FG Y G K+ PK +KC+F+G + P+A+ +V + V + D T + ++A + R T Q+ + EL E Q H + D + P + A L E P ++A+ES E D+W +A E + +N ++ PK K +G K ++K+K K E++K RLVA+ + Q G+ Y E +SP SIR +LA+ A +D EL D + AFL +++EEI++E PE F++ PG + + D CV+ ++++ + +++++DD+L AK ++R + L ++F++KD+G A +G I R+R AR+L Q Y+ ++++F + K P A+ LS + P+N EE E M K PY AVG LM+ TRPD+A AV V+R+ NPG H AV IF+YL T E GI + Q + Y D+D+ +D RRS +G V L+ G I W S +Q + A T+EAEY+A++E KEAL+L+ + + E + G V + D++ A LA N+ RTKHIDV+ H +R+ + + V + + AD+LTKP+ + KF KH
Sbjct: 248 TPQQNGVAERLNRTITETARCLR------LNAELPKIFWAEAVDMACYIINRSPRVALDG-KVAEEVWTGQEVDYSFMRIFGCPAYVHISGEDRSKLDPKSKKCIFLGFKKGVKGYKLWDPVAQKVVISRDVVF-DEKSMT----KAFKEEKSQAAESSNNIGRSTVQVELDEL--ESQSNEEPHSNDQEQDSTRSDRPKRNKRPPVRYGFEDLVSYALLTSSEDPSTFQEAIESSEKDKWMEAMVEENESLSKNKTWELTELPKGKKPIGCKWVFKKKEAVSEKEGERFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQ-PGTENLVCRLKKSLYGLKQSPRQWYKRFDSYMIQIGYTRCEYDCCVYVRILEDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIHRDRGARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFR-LSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQSGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVK--ELGLNQGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADMLTKPVTTTKF-KH 969
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Match: A0A498JVW7_MALDO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498JVW7_MALDO) HSP 1 Score: 295 bits (755), Expect = 2.810e-86 Identity = 188/498 (37.75%), Postives = 283/498 (56.83%), Query Frame = 1
Query: 625 EPRNRRQAMESQEWDEWRKAEETEMLGMVENCVYKQVARPKDKLVVGTKMLYKRKIGQDGKVEKYKCRLVAQEFWQVEGVHYTEKYSPTPATASIRMLLAMAAAKDGELRHFDAEQAFLKADIDEEIYIEIPE----------------EFQEFPGAQAKADPCVFRKVVDGEVEMVVVVHIDDILAHAKDKATMDRFAAELGQKFKLKDMGDAGYYMGCHITRNRKARELKFDQHLYVESMVKRFDVKKTTK--IPAASGVSTLSKTDEPRNPEEKEEMRKFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGQGCELCMEAYTDSDFGACLDTRRSVSGAVLMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVKEALFLRQ-VQEFMEPSMRVGAVNVFKDNEGANKLATNKHASRRTKHIDVKHHLVRDASDARKVRVAYVRSEDQHADLLTKPLDSQKFYKH 2061
+PR+ +AM + W++A ++EM M +N V+ V P+ + VG K ++KRKIG DG VE YK RLVA + Q EG+ Y E +SP SIR+LLA+AA D E+ D + AFL + ++EE+Y+ PE E + F Q + + CV++KVV GE + +V+++DDIL D A + L + F +KD+GDA Y +G + R+R R + Q +Y++ ++ RF ++++ K +P G+ LSK+ EP+ PEE +M PY A+G+LM+ RPDIA AV +R+ NPGP H AV +F+YL TK+ + YG + EL +EAYTD++F + +D R S SG V L GA+SW S+ Q V A T+EAEYVA +E KEA ++++ + E V ++ DN GA A A ++ KH D + +++R + KV + V S D AD LTKP+ + +H
Sbjct: 205 DPRDYTEAMSDIDSKRWQEAMKSEMDSMYQNQVWTLVDPPEGIVPVGNKWVFKRKIGVDGNVETYKARLVAG-YRQREGIDYEETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNSYLEEELYMTQPEGFVSKSEKTKNIRFDTEIKTFGFTQNEDENCVYQKVV-GEAVVFLVLYVDDILLFGNDTAILSSVKVWLSKTFHMKDLGDASYVLGIKLYRDRSRRLIGLSQSMYIDKVLSRFQMEQSKKGFLPVRHGIH-LSKSMEPKTPEEIRQMNVIPYASAIGSLMYAMICIRPDIAYAVSITSRYQSNPGPEHWAAVKTVFKYLRRTKDMFLVYG-RAAELRVEAYTDANFQSDVDDRSSNSGYVFTLNGGAVSWKSKKQSVIADSTTEAEYVAAAEAGKEAFWMKKFITELGVVPTITSPVTLYCDNSGAIAQAKEPRAYQKNKHFDRRFNIIRRYAVEGKVNILKVASADNVADPLTKPMSLIQLDRH 698 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig91.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig91.23.1 >prot_A-nodosum_M_contig91.23.1 ID=prot_A-nodosum_M_contig91.23.1|Name=mRNA_A-nodosum_M_contig91.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=692bp DTPQYNGVAERALGILREKAIILMEELDDVINVPREKLWAQAILFACDVTback to top mRNA from alignment at A-nodosum_M_contig91:404454..406938- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig91.23.1 ID=mRNA_A-nodosum_M_contig91.23.1|Name=mRNA_A-nodosum_M_contig91.23.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2485bp|location=Sequence derived from alignment at A-nodosum_M_contig91:404454..406938- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig91:404454..406938- >mRNA_A-nodosum_M_contig91.23.1 ID=mRNA_A-nodosum_M_contig91.23.1|Name=mRNA_A-nodosum_M_contig91.23.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2076bp|location=Sequence derived from alignment at A-nodosum_M_contig91:404454..406938- (Ascophyllum nodosum dioecious)back to top |