mRNA_A-nodosum_M_contig9033.2.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig9033.2.1
Unique NamemRNA_A-nodosum_M_contig9033.2.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: D8LL82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL82_ECTSI)

HSP 1 Score: 511 bits (1315), Expect = 1.930e-177
Identity = 285/427 (66.74%), Postives = 320/427 (74.94%), Query Frame = 1
Query:   13 RKRTLHVYTLGEGFLGCLGHGDYAPREHALPVEALAHKDVKCISAGWTHSAAVCSD-GELLVWGRPFDMKQPLRIWRIQRFLPFVVRAINFLASKRELLARPVVIPIGNEGAAGXXXXXXXXXXXXXXXXX---------KAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQGSDNVFTIFEPLRVGGQVLDDERVTSLAVGFQQVLVLCESGRVYGWGKSLRGQLGIGEQMIELPVPVDLPGKVIELRXXXXXXXXXXXXXXXXXXXRMQSTDVKAEGRVPVFHDQLYPRKVDVGGGRVVEAFCSSFNTLLRMEDGRMMMFGLEADTRRNVQVPVEVDLPPTRPGSFFGGFNDIIFK-------------SEEAG-------ELLKVSFTSKGASVSPFRLPGIDQDRHVESVSVGWQHTVALV 1203
            RKR LHVYT GEGFLG LGHGD++ RE ALPV ALA +D++C+SAGWTHSAAVC D GE+LVWGRPFD+KQPLRI RIQR  PFVV AIN LAS RE+L  PV +P+  E AA                           +A SVACSAALTVVL EDG+VYCMGYNRWGQCGQG DNVFT+FEPLRVGG+ L+ E V  LAVGFQQVLVLCESGRV+GWGK LRGQLG+G +M+ELP  V+LPGKV++  XXXXXXXXXXXXXXXXXXX MQ T+VK +GRVPV+HDQLYPRKVDVGGGR VEAFCSSFNTLLRMEDGR++M GLEADTRR V  PVEVD+P + PGSFF GFND I K             S  AG          +VSFTS GA V+PF LPG+ +   V+SVSVGWQHTVALV
Sbjct:   23 RKRALHVYTHGEGFLGALGHGDFSAREQALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVSVPLMAEPAAASTASTVTAALHDARPSLHFPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGRALEREAVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELPEEVELPGKVVDXXXXXXXXXXXXXXXXXXXXXXMQGTEVKTDGRVPVYHDQLYPRKVDVGGGRAVEAFCSSFNTLLRMEDGRVLMSGLEADTRRTVPTPVEVDIPASEPGSFFSGFNDTIVKTASTPVASTITDKSTAAGGTGADLPTFHRVSFTSAGARVTPFALPGVPEGTRVDSVSVGWQHTVALV 449          
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: A0A6H5JG88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG88_9PHAE)

HSP 1 Score: 507 bits (1305), Expect = 6.160e-176
Identity = 273/410 (66.59%), Postives = 317/410 (77.32%), Query Frame = 1
Query:   13 RKRTLHVYTLGEGFLGCLGHGDYAPREHALPVEALAHKDVKCISAGWTHSAAVCSD-GELLVWGRPFDMKQPLRIWRIQRFLPFVVRAINFLASKRELLARPVVIPI---------GNEGAAGXXXXXXXXXXXXXXXXXKAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQGSDNVFTIFEPLRVGGQVLDDERVTSLAVGFQQVLVLCESGRVYGWGKSLRGQLGIGEQMIELPVPVDLPGKVIELRXXXXXXXXXXXXXXXXXXXRMQSTDVKAEGRVPVFHDQLYPRKVDVGGGRVVEAFCSSFNTLLRMEDGRMMMFGLEADTRRNVQVPVEVDLPPTRPGSFFGGFNDIIFKSEEAGELL---KVSFTSKGASVSPFRLPGIDQDRHVESVSVGWQHTVALV 1203
            RKR LHVYT GEGFLG LGHGD++ RE  LPV ALA +D++C SAGWTHSAAVC D GE+LVWGRPFD+KQPLRI RIQR  PFVV AIN LAS RE+L  PV +P+          +   A                  +A SVACSAALTVVL EDG+VYCMGYNRWGQCGQG +N FT+FEPLRVGG+ L+ E+V  LAVG QQVLVLCESGRV+GWGK LRGQLG+G++ +ELP  V+LPGKV++LR  XXXXXXXXXXXXXXXXX+MQ T+VK +GRVPV+HDQL+PRKVDVGGGR VEAFCSS NT+LRMEDGR++M+G EADTRR V  PVEVD+P + PGSFFGGFND I K+  A +L    +VSFTS GA V+PF LPG+ +   V+SVSVGWQHTV LV
Sbjct:   39 RKRALHVYTHGEGFLGALGHGDFSAREETLPVAALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVPVPLIAKPSAASTASTITAAFHDARPSSYSLPAPSSLRANSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENEFTVFEPLRVGGRALEREQVVKLAVGLQQVLVLCESGRVFGWGKGLRGQLGVGDETMELPEEVELPGKVVDLRSGXXXXXXXXXXXXXXXXXKMQGTEVKTDGRVPVYHDQLHPRKVDVGGGRAVEAFCSSSNTMLRMEDGRVLMWGFEADTRRTVPTPVEVDIPASEPGSFFGGFNDTIVKTTTAVDLPTFHRVSFTSAGARVTPFTLPGLAEGTRVDSVSVGWQHTVVLV 448          
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: W7T9T9_9STRA (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9T9_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.480e-35
Identity = 117/391 (29.92%), Postives = 168/391 (42.97%), Query Frame = 1
Query:   31 VYTLGEGFLGCLGHGDYAPREHALPVEALAHKDVKCISAGWTHSAAVCSDGELLVWGRPFDMKQPLRIWRIQRFLPFVVRAINFLASKRELLARPVVIPIGNEGAAGXXXXXXXXXXXXXXXXXKAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQGSD----------------------------NVFTIFEPLRVGGQVLDDER--------------------VTSLAVGFQQVLVLCESGRVYGWGKSLRGQLGIGEQMIE-LPVPVDLPG--KVIELRXXXXXXXXXXXXXXXXXXXRMQSTDVKAEGR---VPVFHDQLYPRKVDVGGG---RVVEAFCSSFNT--LLRMEDG-----RMMMFGLEADTRRNVQVPVEVDLP 1011
            +Y++GEG++G LGHGD+  R    P++ALA   +K  +AGW H+A V S G LL++GRP D+++ L +  + + LPF+VR         + + R    P     A                   + V VACS ALT ++   GRVYCMG N +GQCG G                              NV+T   P+    Q LD+E                     V  +A+GFQ  +    SGR + WGK  RGQLG G  +       VDLP   +V+++                    + Q    ++EG      ++ DQL PR+V++ GG    V +  C  F+T  LLR E       R+ MFG+ +  R        V LP
Sbjct:   76 LYSMGEGYMGTLGHGDFQDRTTLTPIDALAPYQIKDFAAGWAHTAVVSSCGRLLLFGRPHDVRKALSLRHMWQSLPFLVRI-------HQAMKRFFDSPRKGSAAFLREDVLLSPRAFPLPEGERPVRVACSGALTAIIVASGRVYCMGQNTFGQCGVGGTVLIPGVGGSGGREGERPTPQKMAAADVANVWTAMVPV----QGLDEEELEESXXXXXXEKGMRRVRDPVVDIALGFQHAVCCTASGRAFAWGKGERGQLGNGVAVNHNAACRVDLPEGTRVVKVASGFNHAAALAEGGMVWIWGKWQGLGRRSEGTGKGSELYEDQLLPREVELPGGVDGSVEDVGCGHFHTSVLLRGEGTGAGAWRLFMFGMRSHIRSMEPKLTPVSLP 455          
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: A0A196SGG2_BLAHN (Ankyrin repeat-containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGG2_BLAHN)

HSP 1 Score: 142 bits (358), Expect = 1.170e-34
Identity = 120/422 (28.44%), Postives = 190/422 (45.02%), Query Frame = 1
Query:    4 RVLRKRTLHVYTLGEGFLGCLGHGDYAPREHALPVEALAHKDVKCISAGWTHSAAVCSDGELLVWGRPFDMKQPLRIWRIQRFLPFVVRAINFLASKRELLAR-PVVIPIGNEGAAGXXXXXXXXXXXXXXXXXKAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQGSDNVFTIFEPLRVGGQVLDDERV-TSLAVGFQQVLVLCESGRVYGWGKSLRGQLGIGE-QMIELPVPVDLPGKVI--ELRXXXXXXXXXXXXXXXXXXXRMQSTDVKAEGRVPVFHDQLYPRKVDVGGGRVVEAFCSS-FNTLLRMEDGRMMMFGLE-ADTRRNVQV-------------PVEVDLPPTRPGSFFGGFNDIIFKS---EEAGELLKVSFTSKGASVSPFRLPGIDQDRHVESVSVGWQHTVAL 1200
            R +   +L VYT G+G +G LGH DY  RE+   V++L  + +  I+ GW H+  V  DGE++++GR  D++  +    +  +LP V+R+ N       +  R P V+PI +                      K V VA S AL+  L++   +Y  GYNR+GQCG    +V  ++ P +V   +LD++ +   LA GFQ    LCESGRVY WGK+  GQLG G+  M   P+ +D    +   ++                    +    D +      +F D  YPR V +     ++ F S  F+       G++   GLE ++T R ++              PV VD+   + G  F        +S    + G++ K ++ S  A V       I  +  VE +S GW+H + L
Sbjct:   26 RSVSTESLSVYTYGKGAIGALGHNDYNDREYPCRVDSLEGRGIHKIACGWAHNCLVDGDGEMVIFGRTQDVRNIIGAGNMISYLPKVIRSFNNFFKNTVIETRFPSVLPIED---------------------GKCVDVAASMALSFCLTDTHHIYAYGYNRYGQCGVDMKDV-NLYAPKQV---MLDEDEIPVKLACGFQHACCLCESGRVYAWGKANHGQLGRGDVDMTFKPLLMDTDASIHYRDVYAGFSSSILISDDGKLYIAGKYWG-DGQNRKNAKMFGDSTYPRLVPLD--HQIDLFASGQFHMTYTDTKGQLYQLGLEDSETCRTIEEESKRDESKRMHREPVPVDMSSIQ-GIRFKKLRCSFTESYGITDDGDVYKWNWLSPPAKVK------ILDEIKVEDISFGWKHVLVL 412          
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: A0A5D6XTS7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTS7_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.080e-30
Identity = 84/239 (35.15%), Postives = 115/239 (48.12%), Query Frame = 1
Query:   22 TLHVYTLGEGFLGCLGHGDYAPREHALPVEALAHKDVKCISAGWTHSAAVCSDGELLVWGRPFDMKQPLRIWRIQRFLPFVVRAINFLASKR---ELLARPVVIPIGNEGAAGXXXXXXXXXXXXXXXXXKAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQGSDNVFTIFEPLRVGGQVLDDERVTSLAVGFQQVLVLCESGRVYGWGKSLRGQLGIGEQMIELPVP-VDLPGKVI 726
            T  VY+ GEG+LG LG G YA       +E  A      +SAGW H   V S G+  V+GR    +  +R   IQR  P+++   N    +R    LL   V +P G                       +A  + CSAALT+VL+E GR++  G N +GQCG   + V    EP+RV    LD + V  +A G+Q  L +  SG V+ WGK  RGQLG G   ++ P   + L GK +
Sbjct:   26 TARVYSYGEGYLGALGTGAYAGVAQPTALEEPAALGATQLSAGWAHGGFVSSAGDTFVFGRALSFRDVIRSTNIQRVAPWLLAWTNEFTRRRGVDTLLPARVALPEGE----------------------RARKLVCSAALTLVLAESGRLFAFGANTFGQCGNDREGVSEP-EPVRVA---LDGDDVVDVAAGYQHALAVTRSGAVFAWGKGERGQLGFGSANVKAPQELIALKGKAV 238          
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: A0A482S5U3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5U3_9ARCH)

HSP 1 Score: 113 bits (282), Expect = 1.380e-25
Identity = 79/222 (35.59%), Postives = 103/222 (46.40%), Query Frame = 1
Query:   31 VYTLGEGFLGCLGHGDYAPREHAL-PVEALAH-KDVKCISAGWTHSAAVCSDGELLVWGRPFDMKQPLRIWRIQR----FLPFVVRAIN---FLASKRELLARPVVIPIGNEGAAGXXXXXXXXXXXXXXXXXKAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQGSDNVFTIFEPLRVGGQVLDDERVTSLAVGFQQVLVLCESGRVYGWGKSLRGQLG 669
            VY  G G  G LG GD    E    P+  L +  +VK +SAGW HSAAV + GE+ VWG+ FD    LR+ RI      F   V R+ N   F   +      P  +P+ +                         +V CSA LTV+L++ G VY MG N+W QCG+  D    ++EP  V G  L       +  G Q V+ L   G  Y WGKS +GQLG
Sbjct:   25 VYVRGSGLYGALGLGDALTDETIFTPLGFLNNINNVKHVSAGWGHSAAVTTQGEVYVWGKCFDFSSLLRLNRISAMSNSFARIVARSSNSMLFGGGEHGYFPVPTRLPLDD-----------------------VQTVQCSAGLTVMLTKQGEVYVMGSNQWNQCGKPIDKQIHVYEPSLVPGIPL----CKKVEAGLQHVVALGRDGSCYAWGKSNKGQLG 219          
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: A0A484E934_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E934_BRELC)

HSP 1 Score: 116 bits (290), Expect = 3.240e-25
Identity = 88/320 (27.50%), Postives = 141/320 (44.06%), Query Frame = 1
Query:   31 VYTLGEGFLGCLGHGDYAPREHALPVEALAHKDVKCISAGWTHSAAVCSDGELLVWGRPFDMKQPLRIWRIQRFLPFVVRAIN-FLASKRELLARPVVIPIGNEGAAGXXXXXXXXXXXXXXXXXKAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQGSDNVFTIFEPLRVGGQVLDDERVTSLAVGFQQVLVLCESGRVYGWGKSLRGQLGIGEQMIELPVP-VDLPGK-VIELRXXXXXXXXXXXXXXXXXXXRMQSTDVKAEGRVPVFHDQLYPRKVDVGGGRVVEAFCSSFNTLLRMEDGRMMMFGLEADTRRN 981
            + + G+GFLG LG G Y       P+       VK IS GW H+  V   G+  ++GR    +  +R   +QR LP +V  +N F  S+      P ++ + +                      +   + CSAALT +L+E G+++ +G N +GQCG G + V ++  P  V     D ++V  +A G+Q  L + E+G V+ WGK  RGQLG G    + P   + L GK ++++                    ++    +  +G      DQ+ PR V      V  + CS F+T     D ++ + G     RRN
Sbjct:   34 LLSYGDGFLGALGTGGYDDVVAPTPLATTTALSVKEISVGWAHAGFVTDQGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTRSRGVDTLEPALLEMPDR--------------------ERVKKIVCSAALTFILTECGKLFTLGANGYGQCGIGEEGV-SVQLPTHVR---FDGDKVVDIASGYQHGLAVTENGTVFCWGKGERGQLGFGSGNTDAPQELIALKGKRIVKVDAGFNYSCAITEDGELYVWGKL----LNPKGMSEANGDQITPRLVQTSDA-VKLSKCSHFHTSFITADNKIWLLGRTPSGRRN 324          
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: A0A7S3XQZ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQZ6_HETAK)

HSP 1 Score: 106 bits (264), Expect = 2.900e-23
Identity = 78/163 (47.85%), Postives = 99/163 (60.74%), Query Frame = 1
Query:   31 VYTLGEGFLGCLGHGDYAPREHAL-PVEALAHKDVK--CISAGWTHSAAVCSDGELLVWGRPFDMKQPLRIWRIQRFLPFVVRAINFLASKRELLARPVVIPIGNEGAAGXXXXXXXXXXXXXXXXXKAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQGS 510
            + + GEGFLGCLG G++  +  +  PV  L  KD K   I++GW HSAAV   G   +WGRPFD K  LR+  +      + +  N  +S  E+L  P V+ +       XXXXXXXXXXXXXX   +AV VACSA LT V++ DGRV C G NRWGQCG G+
Sbjct:   37 LLSAGEGFLGCLGTGNFEDQLISFQPVVGLP-KDEKVIAIASGWAHSAAVTQAGACYIWGRPFDFKNVLRLNNMHTASRALAQLANAFSSPEEVLLAPRVMAL-----PPXXXXXXXXXXXXXXEATRAVGVACSAGLTAVVTSDGRVLCFGQNRWGQCGTGA 193          
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: B7G4H9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4H9_PHATC)

HSP 1 Score: 101 bits (251), Expect = 1.130e-19
Identity = 110/397 (27.71%), Postives = 158/397 (39.80%), Query Frame = 1
Query:   10 LRKRTLHVYTLGEGFLGCLGHGDYAPR-------EHALPVEALAHKDVKCISAGWTHSAAVCSDGELLVWGRPFDMKQPLRIWRIQRFLPFVVR--AINFLASKRELLARPVVIPIGNEG------------------AAGXXXXXXXXXXXXXXXXXKAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQG--SDNVFTIFEPLR---------VGGQVLDDERVTSLAVGFQQVLVLCESGRVYGWGKSLRGQLGIG----EQMIELPVP------------VDLPGKVIELRXXXXXXXXXXXXXXXXXXXRM--------QSTDVKAEGRVPVFHDQLYPRKVDVGGGRVVEAFCSSFNTLLRMEDGRMMMFGLEADTRRNVQVPVEVDLPP 1014
            + +RT  VY +G G+ G  G+G +          E A     +    VK IS GW H+A +  D  LL+ GRP D    LR+ R    LP  VR  AIN   ++   L    V PI   G                  AA                     SV+CSAALT +++E G+VY  G N +GQCG G  S++V+    PLR           G++     V  +A+G Q  + L E G V+ WGK  RGQLG G    E    LPV                 G+V ++                    +         ++  V ++ R+P     L P+     G RV    C S +T + ++DG +   G+   T+  +   V++ LPP
Sbjct:   26 IARRTFAVYAVGSGWTGAFGNGRFDQEISGHNDEEEAGSPLKIYDGSVKDISLGWGHTAILTEDRRLLLAGRPHDFSVLLRLRR----LPLWVRNYAINSSINEFRGLDSRSVHPIALIGRLITWLAIRFKYPTTELEAARRHSIFPELAEIALPDSEVPSSVSCSAALTAIVTESGKVYAFGLNGFGQCGIGMTSNHVWNPSSPLRGLTSEFANQPRGEMEQSYPVVDVALGLQHGICLNEVGEVFCWGKGERGQLGQGLITTEAHTALPVKRAFTLGEKMKPQYQTIGQVTQIDAGMIHCAALTKDNEVLIWGKHVLPLLPGDENKKVSSDARLPYILPGL-PK-----GVRVERIACGSHHTAILLDDGSVYAAGIATHTKEPIHEAVQI-LPP 411          
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Match: D8SE46_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SE46_SELML)

HSP 1 Score: 78.2 bits (191), Expect = 4.420e-12
Identity = 67/246 (27.24%), Postives = 114/246 (46.34%), Query Frame = 1
Query:   25 LHVYTLGEGFLGCLGHGDYAPREHALPVEALAHKDVKCISAGWTHSAAVCSDGELLVWGRPFDMKQPLRIWRIQ----RFLPFVVRAINFLASKRELLARPVVIP---------IGNEGAAGXXXXXXXXXXXXXXXXXKAVSVACSAALTVVLSEDGRVYCMGYNRWGQCGQG--SDNVFTIFEPLRVGGQVLDDERVTSLAVGFQQVLVLCESGRVYGWGKSLRGQLGIGE-------QMIELP 696
            L +Y+ G G  G LGHG+ +      P++AL   +++ I+ G +H  AV +DGE+  WGR  + +  L          + L F   ++  LA+  E  A                GN G  G                 K   VAC    T+ +S+ G++Y  G++++GQ G G  +D++     P +V    L +  +T ++ G++  + L E+G++YGWG +  GQ+G G+       Q+I +P
Sbjct:   77 LTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGL-GDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLL----PHQVAA--LAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIP 315          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9033.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL82_ECTSI1.930e-17766.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG88_9PHAE6.160e-17666.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7T9T9_9STRA2.480e-3529.92Regulator of chromosome condensation/beta-lactamas... [more]
A0A196SGG2_BLAHN1.170e-3428.44Ankyrin repeat-containing protein n=1 Tax=Blastocy... [more]
A0A5D6XTS7_9STRA3.080e-3035.15Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A482S5U3_9ARCH1.380e-2535.59Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A484E934_BRELC3.240e-2527.50Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S3XQZ6_HETAK2.900e-2347.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
B7G4H9_PHATC1.130e-1927.71Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
D8SE46_SELML4.420e-1227.24Uncharacterized protein n=2 Tax=Selaginella moelle... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9033contigA-nodosum_M_contig9033:7533..11164 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LL82
PFAMsRCC1,RCC1_2
Model size1209
Max annot lvl2759|Eukaryota
KEGG koko:K19607
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.17e-178
EggNOG OGsCOG5184@1|root,KOG1426@2759|Eukaryota
Descriptionguanyl-nucleotide exchange factor activity
Cds size1209
COG categoryDZ
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870350.297048-CDS-A-nodosum_M_contig9033:7532..78661680870350.297048-CDS-A-nodosum_M_contig9033:7532..7866Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9033 7533..7866 +
1680870350.311953-CDS-A-nodosum_M_contig9033:8034..84031680870350.311953-CDS-A-nodosum_M_contig9033:8034..8403Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9033 8035..8403 +
1680870350.3226132-CDS-A-nodosum_M_contig9033:9593..98311680870350.3226132-CDS-A-nodosum_M_contig9033:9593..9831Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9033 9594..9831 +
1680870350.332979-CDS-A-nodosum_M_contig9033:10051..101091680870350.332979-CDS-A-nodosum_M_contig9033:10051..10109Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9033 10052..10109 +
1680870350.3470109-CDS-A-nodosum_M_contig9033:10954..111641680870350.3470109-CDS-A-nodosum_M_contig9033:10954..11164Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig9033 10955..11164 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9033.2.1prot_A-nodosum_M_contig9033.2.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig9033 7533..11164 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig9033.2.1

>prot_A-nodosum_M_contig9033.2.1 ID=prot_A-nodosum_M_contig9033.2.1|Name=mRNA_A-nodosum_M_contig9033.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=403bp
SRVLRKRTLHVYTLGEGFLGCLGHGDYAPREHALPVEALAHKDVKCISAG
WTHSAAVCSDGELLVWGRPFDMKQPLRIWRIQRFLPFVVRAINFLASKRE
LLARPVVIPIGNEGAAGAAAAAAAGGQPPPPPPPKAVSVACSAALTVVLS
EDGRVYCMGYNRWGQCGQGSDNVFTIFEPLRVGGQVLDDERVTSLAVGFQ
QVLVLCESGRVYGWGKSLRGQLGIGEQMIELPVPVDLPGKVIELRSGFSH
AVAVLEDGDVYVWGRMQSTDVKAEGRVPVFHDQLYPRKVDVGGGRVVEAF
CSSFNTLLRMEDGRMMMFGLEADTRRNVQVPVEVDLPPTRPGSFFGGFND
IIFKSEEAGELLKVSFTSKGASVSPFRLPGIDQDRHVESVSVGWQHTVAL
VK*
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mRNA from alignment at A-nodosum_M_contig9033:7533..11164+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig9033.2.1 ID=mRNA_A-nodosum_M_contig9033.2.1|Name=mRNA_A-nodosum_M_contig9033.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3632bp|location=Sequence derived from alignment at A-nodosum_M_contig9033:7533..11164+ (Ascophyllum nodosum dioecious)
AGTCGGGTTCTTCGCAAGCGAACTCTACACGTGTACACTCTTGGGGAGGG TTTCTTAGGCTGTCTTGGTCATGGGGACTACGCCCCCCGGGAGCACGCCC TACCGGTCGAAGCGCTCGCTCACAAGGATGTTAAGTGCATATCCGCGGGT TGGACTCACTCAGCTGCCGTCTGCTCCGACGGCGAGCTGCTGGTCTGGGG GCGCCCGTTCGACATGAAGCAGCCTCTACGCATCTGGCGCATTCAGCGTT TCCTTCCGTTCGTTGTGCGCGCGATAAACTTCTTGGCCAGCAAGAGGGAG CTGCTCGCGAGACCCGTCGTGATCCCCATCGGGAGTCCACCACAACCAAC ACCTCCATCATGGTCCTACGACGCGAGGCCGTTAGCATCAGCAGTGGCAG CTGATGGGACCACAGCCACGAATCAACCACCCAGCAACGGCTCCGACGGA AACACCGCAGGTCAGCAGTACAATCCCACCTCAAAACCTTCACTGCTCTC AGATGAGGGAGCTGCTGGTGCTGCTGCCGCCGCAGCTGCTGGCGGACAAC CTCCACCTCCGCCTCCTCCGAAGGCTGTCAGCGTCGCATGCTCCGCAGCC CTCACAGTGGTTCTAAGCGAGGATGGTCGTGTGTACTGCATGGGCTACAA CCGGTGGGGTCAGTGCGGTCAGGGTTCAGACAACGTGTTCACGATCTTCG AGCCCTTGCGTGTGGGCGGGCAGGTGCTGGACGACGAGCGAGTGACGTCT CTGGCGGTGGGGTTTCAACAGGTCTTGGTCCTCTGCGAAAGCGGCCGAGT GTATGGATGGGGCAAGTCTCTCAGAGGGCAGCTTGGCATCGGAGAACAGA TGATCGAGCTCCCTGTACCAGGTGAAAGCGCTGCTCTTTTTTTGTAGATG TCTTCAATATCTGTAGCTCCGTTCCGACTGTAGAGGGATGGACCCACCTC TCGACTCGAGTACAGCATATTGGTACAGAAGAAAACACAGCAGTAACTTA CGGTACTGTAATCAAGTAATATATGACAGTAGCTGCCGTGCACCAGTGAA GAATTACCCCAGCAGTAACTTAGTGTACTGTAATCAAGTAATATATGACA GAAGCTGCCGTGCACCAGTAAAAAATTACCCCTCGAGTACAGAATTACCA CAGCAGTAACAAGTAATATATTAGCTGCCGTGCACCAGTGAAGAATTACC CCAGCAGTAATATAATGACAGAAGCTGCCGTGCACCAGTAAAAAATTACA GCCACAGCAGTAATCAAGTAATATATGACTTACCAGTAACAGTAATCAGC AGTAACTTACCGTAGTACGACAGTAGTTGTCGTGCACCAGTCGTTTTATT TATTTAAGATTGTGTTCAAAAAGATCAGGGTACCGGTTAGCATTGGTCGG TGCCATTGCTTGTAGTTTTATCGTGATTTTGATCCCTGTTGGTCAGAGTA GCGCGCTGTCACCATGATGTGACCCGTTGCCCTTCGTACTCCGAGACCCC GAGCGGAATTGGTATTTGATAAAGGCTACGGCTGACTTGTGCCACCGTAG TTTCTTCGCTTAAATGTTTGAAGTAACAACAAAGGTCTAAATGCGTTCAG ATTTAGTGTACAGTATGGAGGTGAGCTTCCCGATGTGACGACATTGGGGA ACCCTTTTTGAAGAGTTTTTGTCTGAACAGTCCAAAGTCCCACCTAAATA TTTTGACAATTTTTCCCTCGAAGGTGGATGTCAGAAGGTTTAGATGCGTT CATATTTTTCTTTATAAACAACTAAAGGAAGTTTACTTCACACACAGTTA GCTAATTGTTTAATCGGATCTGAAATTTTGTTTTAAGAGGATTGTTCACA TATGCCAGTCATTTTGCTCTGACCTTCATTTTGTCCAGAAAATCAGGTTC ACGTTCAGCATCTCCACAAGAGGCATGCCGTACGTCGAGCCGCCTCTGGT CGCCCTCAACCGTCCTTACTAACTCCATACATCCAACAATGCCTTCTGTC ACTGCTTACCCCTCCGCCTCCGTCCCTCTCGACCACGATCCGCGCCCCCG ACGAAGGACAGTCGACCTGCCTGGCAAGGTGATAGAACTCCGGAGCGGCT TCAGCCACGCGGTTGCAGTTCTCGAGGACGGCGACGTGTACGTTTGGGGC AGGATGCAGAGCACCGATGTCAAGGCAGAAGGCCGCGTTCCTGTGTTCCA CGATCAGCTGTATCCACGAAAGGTGGACGTTGGTGGAGGTCGTGTCGTGG AGGCGTTTTGCTCCTCGTTCAACACACTTCTCCGCATGGAGGATGGAAGG TGCGGAAATGAGGTACTGGGACATCGGCTGGCGGCTAGTTTTATTAGATG TGTTTTGATAACGTCATGCGTTTCTCTCACCTGGTGGTGACACACTGGTC CCCATATTTTACGGCACGATCGTGTGAGAAATTCTCACCTCTAGCTCACA CCATGTATCTTTTTCGCTCACGTTTGGATTGAAATATTGCTGAGCATTGT TACATTTCCTCTGGCGCAGGATGATGATGTTCGGCTTAGAAGCAGACACG CGAAGAAACGTACAAGTCCCCGTCGAGGTGAGAAAGATGGTCGCCTCAGA AGTTGGTGTCCTATATCTGCAGTCCATACTTATTTTGTTAGTTTGTTTGT ACAAGGTACTACAAGGTACAAACATATTTTGGATACTTGAAACAAAAAAA CGAGCTGGGACGCAAACGCGTGGTTTACACAGGCCGCGGCATTGCTCCCA CTGCCTTCAAGCGCGCTCAGGGGTGGTATTATTCTTAACTTTCGGGTGGA AACCCCCCATTTCATGAGGCACAAGCGCGGCGAAAAGCTCTAGATTAAAC CCCAGGTTGCACGCGTTGACGCTGCTGTCGGGTTCGTCCTGACGCGGATC CGCACCGCACTGGCTCTATATTCCCATCCTTGGGCGATGTTGTCTCTCCT GACCTGTTCCTCGTTGATCCTTGGTCCTCTTTCGAGGGGATGGGGGACAT AACGCGGGGGTACGGGAAGAGAGGCCGCCGTTACGTGTCGGGGAATAACC ATAGAGCATACATTTGTTGTCGAATTTTATATATTTTTTATGAGTGTAGT GATGTTTTGTTTGTACTGTGGCGGATTGGAGTTATTTTTTGTCTTGACAA AGCGTGGGTCGGTGACGCGCAAAAGTTGGATCCGAAATAATAGATCGGGT GAAAACTGCCGTTTTTTGTTTCAGGGTCGTCTTTTAAGAAAGATTTGTAC CTGTCAAGGAGCTTTGGCGACGTTTTTTTTACAAAACTTGTCTTCACAAA AATATAATGCATTTATCGATGATGTGAATATTGCACGTTTTCCACCCCGT TCCCGTTCCCTTTCCTGTATGCTTCGGTGGGTCGGTGGATGCGCCGGTAT TCTCTATATCCATAAATGACAGGTTGACCTGCCGCCTACTCGACCGGGGT CGTTCTTTGGAGGTTTCAACGACATCATCTTCAAGTCTGAGGAAGCAGGA GAGCTGTTGAAGGTGTCTTTCACGAGCAAGGGTGCAAGCGTCTCTCCGTT TCGGCTGCCGGGGATTGACCAAGACCGACACGTGGAATCTGTGTCTGTTG GGTGGCAGCATACCGTGGCTCTCGTCAAGTAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig9033:7533..11164+

>mRNA_A-nodosum_M_contig9033.2.1 ID=mRNA_A-nodosum_M_contig9033.2.1|Name=mRNA_A-nodosum_M_contig9033.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1209bp|location=Sequence derived from alignment at A-nodosum_M_contig9033:7533..11164+ (Ascophyllum nodosum dioecious)
AGTCGGGTTCTTCGCAAGCGAACTCTACACGTGTACACTCTTGGGGAGGG
TTTCTTAGGCTGTCTTGGTCATGGGGACTACGCCCCCCGGGAGCACGCCC
TACCGGTCGAAGCGCTCGCTCACAAGGATGTTAAGTGCATATCCGCGGGT
TGGACTCACTCAGCTGCCGTCTGCTCCGACGGCGAGCTGCTGGTCTGGGG
GCGCCCGTTCGACATGAAGCAGCCTCTACGCATCTGGCGCATTCAGCGTT
TCCTTCCGTTCGTTGTGCGCGCGATAAACTTCTTGGCCAGCAAGAGGGAG
CTGCTCGCGAGACCCGTCGTGATCCCCATCGGGAATGAGGGAGCTGCTGG
TGCTGCTGCCGCCGCAGCTGCTGGCGGACAACCTCCACCTCCGCCTCCTC
CGAAGGCTGTCAGCGTCGCATGCTCCGCAGCCCTCACAGTGGTTCTAAGC
GAGGATGGTCGTGTGTACTGCATGGGCTACAACCGGTGGGGTCAGTGCGG
TCAGGGTTCAGACAACGTGTTCACGATCTTCGAGCCCTTGCGTGTGGGCG
GGCAGGTGCTGGACGACGAGCGAGTGACGTCTCTGGCGGTGGGGTTTCAA
CAGGTCTTGGTCCTCTGCGAAAGCGGCCGAGTGTATGGATGGGGCAAGTC
TCTCAGAGGGCAGCTTGGCATCGGAGAACAGATGATCGAGCTCCCTGTAC
CAGTCGACCTGCCTGGCAAGGTGATAGAACTCCGGAGCGGCTTCAGCCAC
GCGGTTGCAGTTCTCGAGGACGGCGACGTGTACGTTTGGGGCAGGATGCA
GAGCACCGATGTCAAGGCAGAAGGCCGCGTTCCTGTGTTCCACGATCAGC
TGTATCCACGAAAGGTGGACGTTGGTGGAGGTCGTGTCGTGGAGGCGTTT
TGCTCCTCGTTCAACACACTTCTCCGCATGGAGGATGGAAGGATGATGAT
GTTCGGCTTAGAAGCAGACACGCGAAGAAACGTACAAGTCCCCGTCGAGG
TTGACCTGCCGCCTACTCGACCGGGGTCGTTCTTTGGAGGTTTCAACGAC
ATCATCTTCAAGTCTGAGGAAGCAGGAGAGCTGTTGAAGGTGTCTTTCAC
GAGCAAGGGTGCAAGCGTCTCTCCGTTTCGGCTGCCGGGGATTGACCAAG
ACCGACACGTGGAATCTGTGTCTGTTGGGTGGCAGCATACCGTGGCTCTC
GTCAAGTAG
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