mRNA_A-nodosum_M_contig903.14.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig903.14.2
Unique NamemRNA_A-nodosum_M_contig903.14.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: D7G7G0_ECTSI (Alpha-SNAP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G0_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 7.800e-88
Identity = 188/297 (63.30%), Postives = 209/297 (70.37%), Query Frame = 1 
Query:  340 GRDNEAKAARFMEDGEKCLTK-WSLFGSSTKFEDAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSEAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXXSDYLASENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEAMADPDNEDIDL 1227
            G   E KA + + D EK L K WSLF S+TK EDAAE               XXXXXXXXXXXXXXXXXXXXXXXXXXX            S AVD++ KAI I+NESGRFQQAGKML E+G+IY+               S+YLA E   SQ+NACLVKVA  VSKD E P L  AA IYE+LGRSCMEKKLL MNAKGYWLQAGLCLLAQGDTV AR K SDFT AD+TF+DSRE+RF   LIQASED +VE  SQHCF+YD+ISKLDPWKT+MCLRIKR IEA    D+E+ DL
Sbjct:    5 GGGQEEKAQQHIADAEKILKKKWSLFSSTTKNEDAAECYDKAARCYKVARNMXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAAKCRKSVEPSSAVDAFLKAIAIYNESGRFQQAGKMLQEVGEIYEAEGMTDDAVNSLQQASEYLAGEGCVSQSNACLVKVAGIVSKDAENPNLTLAAEIYEKLGRSCMEKKLLAMNAKGYWLQAGLCLLAQGDTVAARNKQSDFTSADYTFDDSREYRFLDQLIQASEDFNVENFSQHCFDYDQISKLDPWKTNMCLRIKRVIEAAHVEDDEEFDL 301
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: A0A836CLW2_9STRA (Alpha-SNAP n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLW2_9STRA)

HSP 1 Score: 180 bits (456), Expect = 4.360e-48
Identity = 129/305 (42.30%), Postives = 169/305 (55.41%), Query Frame = 1 
Query:  331 MSSGRDNEAKAARFMEDGEKCLTKWSLFGS-----STKFEDAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSEAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXXSDYLASENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEAMADPDNE-DIDL 1227
            M++  D E KA   +E+GEK L K SLFGS     + K+EDAAE                              XXXXXXXXXXXXXXXX        +E++ + R AI  + E GRF QA K+L ++G++Y+               +DY   ENS+  ANACL+KVA   SK + PP    AA I+E LGRSC   +LLQMNAKGY+ QA LCL+A  D+V AR KL +F   D TF  SRE +F ++L  A E  D +A +   +EYD+++ LDPWKT+  + IKR IE      +  D+DL
Sbjct:    1 MAAFGDQENKARALLEEGEKVLNKKSLFGSLLGSNTQKYEDAAEKFAKAANCFKVARKLKEAGDTYMRVASMHEXXXXXXXXXXXXXXXXKCYKESYPAESIGAMRSAITHYTEMGRFSQAAKLLKDVGEVYEADANYPDARDCFQMAADYFNGENSTQSANACLIKVATISSKFISPPDYMGAAKIFEDLGRSCTSTRLLQMNAKGYFQQAVLCLMAANDSVAARLKLDEFKSVDFTFGASRECKFAEDLCAAMETYDGDAFATASYEYDQVTALDPWKTTTLVTIKRLIEGGGGAGSAGDVDL 305
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: A0A6T8LLA3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8LLA3_9STRA)

HSP 1 Score: 172 bits (436), Expect = 4.480e-45
Identity = 112/319 (35.11%), Postives = 154/319 (48.28%), Query Frame = 1 
Query:  325 MAMSSGRDNEAKAARFMEDGEKCLTKWSLFGSST--KFEDAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GSSEAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXX---------SDYLASENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEAMADP------DNEDIDL 1227
            MA         +A +F+ D EK L K + F SST  K+EDAAEL                                                     ++EAV +Y +A+ +  ++GR  QA K+  +I ++Y+                        SD    EN+ SQA+ C  KVA   S  ++PP L + A IYE LGR C+E  LL+ NAKGY+LQ+ LC LA GD + A Q LS F   D TF +SRE +F   LI+A E+ D E+ +  CFE+D ISKLDPWKTSM +++KRSI+  +        D +D+DL
Sbjct:    1 MATMISMKQRVRAEKFLNDAEKTLKKSTWFSSSTEQKYEDAAELYDQAANAYKVGQMNSEAGVAYMKAAELYRDKLSNQMEGSKALSNAGSCLKKVNAAEAVKAYNQAVSLLCDAGRLNQAAKLSKQIAEMYENDSSAVADESVDPTVLAIESYQQASDLFEMENAKSQASQCKAKVAELSSAQLDPPDLLKGAEIYENLGRECLENNLLKYNAKGYFLQSCLCHLANGDAIAASQSLSRFESLDFTFGESREGKFVSGLIEAIENFDSESFATICFEFDRISKLDPWKTSMLVKVKRSIDDQSGDVGQGADDGDDVDL 319
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: A0A7S2IBT3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBT3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.110e-43
Identity = 144/307 (46.91%), Postives = 185/307 (60.26%), Query Frame = 1 
Query:  343 RDNEAKAARFMEDGEKCLTKWSLFGSST--KFEDAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGS-SEAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXXSDYLA------------SENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEAMADPDNED 1218
            +   AK   F+ + +  L+K + F SST  K+EDAAEL      XX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      S+A++ YR A+ +  ++GR  QA K+  E+ +IY+               S  LA             EN+ SQ+N C  KVA   S  ++PP L RAA +YE LGR C+E  LL+ NAKGY+LQ+ +C LA GD +GA Q LS F   D+TF DSRE +F + L+   +  D E  +  CFEYD ISKLDPWKT++ +++KRSIE  A    +D
Sbjct:    6 KQQRAKGDTFLREAQGTLSKKTWFASSTEQKYEDAAELYDKAATXXKVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKKSDPSKAIECYRSAVTLLCDAGRLTQAAKLSKEVAEIYENEGAGDDDPNAGGDNSVALAIESYEQAAELFEMENAKSQSNTCRAKVAELCSAALDPPDLLRAAQLYEELGRHCLETNLLKFNAKGYFLQSVMCHLANGDAIGAGQGLSKFEGLDYTFADSREGKFAKQLVDCVDGFDSEGFATACFEYDRISKLDPWKTTILVKVKRSIEDQAGDGGDD 312
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: A0A7S4TA13_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TA13_9STRA)

HSP 1 Score: 165 bits (417), Expect = 4.080e-42
Identity = 87/215 (40.47%), Postives = 125/215 (58.14%), Query Frame = 1 
Query:  613 EAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXX-------------SDYLASENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEAMADPDNED 1218
            +A+++YR A+ +  ++GR  QA K+  E+ +IY+                            ++    ENS SQ+N C  KVA   S  ++PP L RAA +YE LGR C+E  LL+ NAKGY+LQ+ +C LA GD +G  Q LS F   D+TF DSRE +F + L++  +  D E  +  CFEYD ISKLDPWKT++ +++KRSIE  A   ++D
Sbjct:  125 KAIEAYRSAVALLCDAGRLTQAAKLSKEVAEIYENEGAGEDDADAAAGDKSVALAIESYEQAAELFEMENSKSQSNMCRAKVAELCSAALDPPDLLRAAQLYEELGRHCLETNLLKFNAKGYFLQSVMCHLANGDAIGGGQGLSKFEGLDYTFADSREGKFARQLVETVDGFDSEGFATACFEYDRISKLDPWKTTILVKVKRSIEEQAGGGDDD 339
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: A0A7S3P3Z3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3Z3_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.480e-42
Identity = 85/212 (40.09%), Postives = 127/212 (59.91%), Query Frame = 1 
Query:  610 SEAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXX-----SDYLASENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEAMA-DPDNEDIDL 1227
            ++AV++Y+ AI +  ++GR  QA KM  +  ++Y+                    +D    E+S  Q++ C  KVA   S  ++PP L +A  IY+ LGR+C++  LL+ NAKGY+LQ+ LC LA  D +GA Q L  +   D+TF +SRE +F + L++  E  D E  +  CFE+D +SKLDPWKTSM ++IKRSI+  A D D +D+DL
Sbjct:   98 ADAVEAYQSAISLLTDAGRLTQAAKMSRDCAELYESDEIAIENQIMLAIQMYEQAADLFGMEDSKGQSSNCKAKVAELSSAALDPPDLLKAGQIYDELGRNCLDSNLLKFNAKGYFLQSILCQLANSDAIGAEQALQRYEGVDYTFSESREGKFARTLVECVEGFDAEGFATACFEFDRVSKLDPWKTSMLVQIKRSIQGEAGDGDEDDVDL 309
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: A0A6U5JA08_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5JA08_9STRA)

HSP 1 Score: 163 bits (413), Expect = 4.910e-42
Identity = 106/294 (36.05%), Postives = 146/294 (49.66%), Query Frame = 1 
Query:  358 KAARFMEDGEKCLTKWSLFGSSTKFEDAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSS--EAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXXS-DYLASENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEA--MADPDNEDID 1224
            KA  ++   EK L K+S F S+ K+EDAAEL                                                     S  EA+ +Y  AI+I+ ESGR   A K+  EI +I +               + DY    ++ SQ++A L KVA   S  + PP   RA  IYE+LGRS +E  LL+ NAKGY+LQA LC LAQGD++ A QKL  F + D+T  DSRE +F   LI+  E  D ++ +  C E+D IS+LDPWKT++ L++KR+I+   M +  N D D
Sbjct:    4 KAEEYISQAEKSLNKFSFFSSTAKYEDAAELYAKAANTFKVAQMWSEAGKAYMTAADLYLTKLKDQESDACQNMVNAGGCFKRVSPEEAISAYDGAIDIWLESGRMNMAAKLAKEIAEIQESNAGLVGEAIDSYQRAADYYDMADAKSQSSAMLAKVAELSSSALNPPDYHRAGGIYEKLGRSSLESNLLKFNAKGYFLQALLCHLAQGDSIAASQKLESFRNIDYTLADSREGKFAGQLIECIEKYDSDSFATACAEFDRISRLDPWKTAILLKVKRTIDGGEMGNDGNNDDD 297
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: A0A1Z5JPI2_FISSO (Alpha-soluble NSF attachment protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPI2_FISSO)

HSP 1 Score: 163 bits (413), Expect = 6.700e-42
Identity = 88/215 (40.93%), Postives = 123/215 (57.21%), Query Frame = 1 
Query:  610 SEAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXXS--------DYLASENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEA-MADPDNEDIDL 1227
            ++AV +Y+ +I +  ++GR  QA K+  E  ++Y+               +        +    E++ S  N C  K+A   S  ++PP L RA+ +YE LGR+C++  LL+ NAKGY+LQA LC LA  D VG R+ LS F   D+TF DSRE +F   L+   E  D E L+  CFEYD ISKLDPWKTSM +++KRSIE      D +D DL
Sbjct:   98 ADAVSAYQSSISLLTDAGRLSQAAKLCKECAELYESEEVGGDANKSSVVYAIEMYEQAAELFTLEDAKSSVNQCNAKIAELCSAALDPPDLLRASQLYEDLGRNCLDSNLLKFNAKGYFLQAVLCHLANNDAVGGREALSRFEGLDYTFSDSREGKFATQLVDCVEGMDAETLATACFEYDRISKLDPWKTSMLVKVKRSIEGDEGGNDEDDFDL 312
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: B7G602_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G602_PHATC)

HSP 1 Score: 162 bits (410), Expect = 1.770e-41
Identity = 86/214 (40.19%), Postives = 127/214 (59.35%), Query Frame = 1 
Query:  613 EAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXXS--------DYLASENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEAM-ADPDNEDIDL 1227
            +AV SY+ A+ +  ++GR  QA K+  E  ++Y+               +        +    E+S SQA+ C  KVA   S  ++PP L RAA +Y+ LGR+C++  LL+ NAK Y+LQA LC LA GD +GA Q L  +   D+TF +SRE +F + L++  E  D EA +  C+E+D ISKLDPWKTSM +++KRSI+   A  + +D+DL
Sbjct:   99 DAVSSYQSAVSLLTDAGRLTQAAKLCKECAELYESEEVAEAGGKSNVVAAIEAYEQAGELFGMEDSKSQASQCRAKVAELCSAALDPPDLLRAAGLYDELGRACLDSNLLKYNAKSYFLQAILCHLANGDAIGAEQALGRYEGVDYTFAESREGKFCRQLVECVEGYDAEAFATACYEFDRISKLDPWKTSMLVKVKRSIQDDGAGEEEDDVDL 312
[Close]
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Match: A0A7S2WGN8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WGN8_9STRA)

HSP 1 Score: 161 bits (407), Expect = 4.570e-41
Identity = 107/311 (34.41%), Postives = 150/311 (48.23%), Query Frame = 1 
Query:  325 MAMSSGRDNEAKAARFMEDGEKCLTKWSLFGSST--KFEDAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGS-SEAVDSYRKAIEIFNESGRFQQAGKMLTEIGDIYKXXXXXXXXXXXXXXX----SDYLASENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQMNAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEAMADP---DNEDIDL 1227
            MA    R   AK   FM + EK L K + F SST  K+E+AAEL                                                    + +EA+ SYR AI +  ++GR  QA K+  E+ ++++                           + SQA+ C  KVA  +S  M+PP L RAA IYE LG+ C++  LL+ NAKGY+LQA LC L  GD++ A Q    +   D+TF DSRE +F  +LI+  E  D E  +  CFE+D I+KLDPWKTS+ +++KRS+E   D    D++D+DL
Sbjct:    1 MASMVSRQQRAKGETFMAEAEKELKKSTWFSSSTEQKYENAAELLEKAANAFKVGGCGDEAGSAYARASDLYRDKLKNMGQASKCLSNAGACYKKDNPTEAIASYRSAITLLCDNGRLTQAAKLSKEVAELFEQEIDSNETVTLAIESYXXXXXXXXXXRAKSQASTCKAKVAELLSAAMDPPDLIRAAEIYEDLGKQCLDNNLLKYNAKGYFLQAILCHLGNGDSIAATQATQRYEAWDYTFGDSREGKFGNSLIECVEKFDSEGFATACFEFDRITKLDPWKTSILVKVKRSVEGSGDDGLGDDDDVDL 311
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig903.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7G0_ECTSI7.800e-8863.30Alpha-SNAP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
A0A836CLW2_9STRA4.360e-4842.30Alpha-SNAP n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A6T8LLA3_9STRA4.480e-4535.11Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2IBT3_9STRA1.110e-4346.91Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4TA13_9STRA4.080e-4240.47Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S3P3Z3_9STRA4.480e-4240.09Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6U5JA08_9STRA4.910e-4236.05Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1Z5JPI2_FISSO6.700e-4240.93Alpha-soluble NSF attachment protein n=2 Tax=Fistu... [more]
B7G602_PHATC1.770e-4140.19Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2WGN8_9STRA4.570e-4134.41Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig903contigA-nodosum_M_contig903:102405..118147 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7G0
Preferred nameNAPB
PFAMsSNAP
Model size1857
Max annot lvl2759|Eukaryota
KEGG koko:K15296
KEGG Pathwayko04138,ko04721,map04138,map04721
Hectar predicted targeting categoryother localisation
GOsGO:0000149,GO:0000278,GO:0000281,GO:0000910,GO:0001505,GO:0001654,GO:0001671,GO:0001745,GO:0002009,GO:0002090,GO:0002165,GO:0003674,GO:0005483,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005911,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006888,GO:0006890,GO:0006891,GO:0006897,GO:0006900,GO:0006901,GO:0006903,GO:0006906,GO:0006914,GO:0006996,GO:0007033,GO:0007049,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007274,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009506,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010646,GO:0010807,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016079,GO:0016082,GO:0016192,GO:0017156,GO:0017157,GO:0017158,GO:0019222,GO:0019898,GO:0019905,GO:0022008,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0023052,GO:0023061,GO:0030054,GO:0030100,GO:0030154,GO:0030182,GO:0030234,GO:0030424,GO:0031090,GO:0031201,GO:0031323,GO:0031410,GO:0031629,GO:0031982,GO:0032386,GO:0032501,GO:0032502,GO:0032781,GO:0032879,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033267,GO:0034214,GO:0034613,GO:0034622,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035249,GO:0035295,GO:0035494,GO:0036465,GO:0040007,GO:0042144,GO:0042886,GO:0042995,GO:0043005,GO:0043085,GO:0043195,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043462,GO:0043624,GO:0043679,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044248,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0044877,GO:0045026,GO:0045055,GO:0045176,GO:0045184,GO:0045202,GO:0046903,GO:0046907,GO:0046928,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048259,GO:0048280,GO:0048284,GO:0048488,GO:0048489,GO:0048513,GO:0048526,GO:0048563,GO:0048569,GO:0048589,GO:0048592,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050804,GO:0051046,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051301,GO:0051336,GO:0051345,GO:0051588,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055044,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060560,GO:0060562,GO:0060589,GO:0060590,GO:0060627,GO:0061024,GO:0061025,GO:0061640,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070044,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090114,GO:0090174,GO:0090596,GO:0097458,GO:0097479,GO:0097480,GO:0097576,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098772,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099177,GO:0099500,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0150034,GO:1902803,GO:1903047,GO:1903305,GO:1903530,GO:2000300
Exons8
Evalue3.77e-93
EggNOG OGsKOG1586@1|root,KOG1586@2759|Eukaryota
Ec32 ortholog descriptionalpha-SNAP
Ec32 orthologEc-02_000120.1
DescriptionSNARE complex disassembly
Cds size909
COG categoryS
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig903.14.2prot_A-nodosum_M_contig903.14.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig903 103029..117823 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870347.6304212-UTR-A-nodosum_M_contig903:102404..1030281680870347.6304212-UTR-A-nodosum_M_contig903:102404..103028Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig903 102405..103028 -
1680870347.7567513-UTR-A-nodosum_M_contig903:117823..1181471680870347.7567513-UTR-A-nodosum_M_contig903:117823..118147Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig903 117824..118147 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870347.644218-CDS-A-nodosum_M_contig903:103028..1031301680870347.644218-CDS-A-nodosum_M_contig903:103028..103130Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig903 103029..103130 -
1680870347.653807-CDS-A-nodosum_M_contig903:103867..1039461680870347.653807-CDS-A-nodosum_M_contig903:103867..103946Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig903 103868..103946 -
1680870347.6660404-CDS-A-nodosum_M_contig903:104508..1045931680870347.6660404-CDS-A-nodosum_M_contig903:104508..104593Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig903 104509..104593 -
1680870347.6763499-CDS-A-nodosum_M_contig903:106277..1064071680870347.6763499-CDS-A-nodosum_M_contig903:106277..106407Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig903 106278..106407 -
1680870347.6871665-CDS-A-nodosum_M_contig903:106967..1070301680870347.6871665-CDS-A-nodosum_M_contig903:106967..107030Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig903 106968..107030 -
1680870347.7157745-CDS-A-nodosum_M_contig903:107476..1076141680870347.7157745-CDS-A-nodosum_M_contig903:107476..107614Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig903 107477..107614 -
1680870347.7313008-CDS-A-nodosum_M_contig903:108759..1089181680870347.7313008-CDS-A-nodosum_M_contig903:108759..108918Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig903 108760..108918 -
1680870347.7441907-CDS-A-nodosum_M_contig903:117670..1178231680870347.7441907-CDS-A-nodosum_M_contig903:117670..117823Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig903 117671..117823 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig903.14.2

>prot_A-nodosum_M_contig903.14.2 ID=prot_A-nodosum_M_contig903.14.2|Name=mRNA_A-nodosum_M_contig903.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=303bp
MAMSSGRDNEAKAARFMEDGEKCLTKWSLFGSSTKFEDAAELFEKAGRLY
KVARNMDAAAAAYERAAENFEKANSAHESARSHVEAAKCKKEAGSSEAVD
SYRKAIEIFNESGRFQQAGKMLTEIGDIYKEEGNYSEAVEAWQEASDYLA
SENSSSQANACLVKVAAAVSKDMEPPQLGRAATIYERLGRSCMEKKLLQM
NAKGYWLQAGLCLLAQGDTVGARQKLSDFTDADHTFEDSREFRFFQNLIQ
ASEDNDVEALSQHCFEYDEISKLDPWKTSMCLRIKRSIEAMADPDNEDID
LR*
back to top

mRNA from alignment at A-nodosum_M_contig903:102405..118147-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig903.14.2 ID=mRNA_A-nodosum_M_contig903.14.2|Name=mRNA_A-nodosum_M_contig903.14.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=15743bp|location=Sequence derived from alignment at A-nodosum_M_contig903:102405..118147- (Ascophyllum nodosum dioecious)
GTGCTGTACGGGGACGGGTTCGAGTGGAGCTGTTATCAGCTGAATAACTT
GGTGGGTTCACCTTGGCTTGTGAGATCCTCGCTACTAAATACCGTAGAGA
ACATTGAATTTCCGACTCGTCTGTCGAGCAAATCCGATCTGGCACCGTCT
GTACGGTATTACTGGTGCCCTTCAAAAGTGGATAGCGAGATTGTGTATCG
TACCAGCCAGGTACTTTTGTACGTTGCTACTGCGGAAGCTTTCACCCAAA
AGAGGTGCACGAGAAGACGTCTTCGTGAGGGATCACCGCTTCTGTTTCTA
TCTACCGAGGAGTAGACCGGAGGTATGGCTATGTCCAGTGGGCGAGATAA
CGAGGCTAAAGCGGCGCGGTTCATGGAAGACGGCGAGAAGTGCTTGACGA
AGTGGTCTCTGTTCGGCTCCAGCACCAAATTCGAGGATGCTGCCGAGTTG
TTTGAAAAAGCAGGCCGACTCTACAAGGTGAGCAATTTCATTTCACAGAT
CATGCAATGTGCTTTCAATCCCGCTAGTCAGTAGGTCTAGCTCATCTGGG
GAAGTCGCGGTTCGAAAATGCTCTCAGTACGAACTAGATCGTAGGTGAGC
CTATTGTTGTCACTCTCTCACTTCTATACTACGATACAGTCAGAGTAAGT
GCATCTGCTCCCCGATGGAACGTGTATGACAACTGTAGCTGTGTACTGTA
CTACATAGAGACAGATAGCGGTGCTTTTGGAAAAACTACTTGTAGGGTTT
GTGTCGATACGAGTGCTCGATAGCCAGTCGCCCCGGTAGCTCAGAGGTAC
CTCGTAACCCTCTGACACGTTGGGACGTGAGTTCGACCCCGGCAAACGGG
ATTTTTCTCACTTGAAAACAAAAAAACAAAACAAAAAATGCCCAACGGGT
GGAGAACGATTAATAAAGTCGTTAGAGCACAAAATTCGACCTCACGGTCG
ACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGAGAAAAATTGAGGCACG
CACCGCAGAAAGAAGGTGGATGAAAAATCCTGTGTGACCCCGGCTGGTAC
GTCCAACGAACTTGATGTCCAGAATGAATGGGACGAGGTGCCATTACAAA
TAATCAAGCCAGGGCGTCTCGCCGATCGCCACAAGATGTCGTTCTATTTT
CTACTACAAGACAGTAGGACTGTATTGGTAGTATACTTTCCAAATGAAAT
CTAAGCTCATTTCTCGACTTGGGATCCCAGAACACCGATAATCTCTCGTG
CGGAATTTCAATTTGTCAGGGTTGAGTGAGAAAGTTTATTATTATCACTA
CTCTGTAGACTCTACTGCTGTACAATTACCAGTACTACCTGTATTTATTG
TTACAATGCACTACTGCGGTTATGTTAGGTTATGATTGGTGACTGTGCAT
CGTGATTAATATTAAGTCTACAGTATAACGGTGGTTTTCTCCCCGACATT
ATACTGTTGACCCAAGGTTACTACCATTGGGGAACCCGGTTAAATACCAT
GTAGTCGTTGTATATATAGCCTATGTTAAAGTATGTTTCTACTACCATGT
GTGATGGTGTATGTCCCAACGAACTTGATGTCAGAATGAATGCGATTGAT
GAAAGACTAGGATGTGTACAGTATAACGTCGTGGACTTCTCCCCGACATC
ATACTGTTGACCCAATATTATTTCCATCGGGGAACCCGTTTAAATGCCAT
GAAGAGGTTTTGTATTTGCAGCCTTTGATCCCACCTAAACGTTTTGACAT
TTTTTCCCGCCTGACTGGGGGATGCTCAGAAGGTCTAGGTGCGTTCTGAT
TTTTCTTCAAATACTTTCATTTTCTTGATTCTGTCGCGGAAAGCGAGTGA
GTCTGAGTAAGGCCAATCGTTATGGGACACAAAAATCGGTCCGAGCACAG
AAATTCCGTATTCCTTGGTTCTATTATAGGGTGTTTATGGTCATCACATA
TAGCAGAGTATGGGTCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCA
GCTGAACAGGGAAAATAAATATTCCCCTCTCCCCGTGCGTGCCTGAGAAT
TTGGTCTCTCGAGATGGGTTCAGCCGTCCCGTCCCGCGTCAGCCTGCTCA
TCTCCATACTCAGGCTGAATCTAGTGCTTACGGGATTCCTCCCGAGTTCC
GCGGCGGCGTCCATTTATGAAACCGCCATACGCCATCGGGTCAGCCCCGT
GTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTA
CGCCGGCACAGAGCCAGTAAACCTCACGGTAGTTCCGAACGAGTGATGCC
TTGGCAGATCACCATGGACCAATTAGACTAATATGCGCCTCTCTTTCCCA
CACCCACTATTGGATGAAGTGGGCATATTGAAAGTACCGGCGGGGAAGAG
CCGACTCCGGTTTGGTCTTCAAGTACGAAGCAAGTCCGAAACCAAACCCA
ATTTTGGTTTCAAAAAGAGTGTGCGAAGAGCAGGGCGCGAACTTTTCGGT
CTTCGACAGAAAGAAAATTTCGTTCGAGATTGATGTTTAATCAAGGGTAA
TTAATGTTTTTCTTTAAACCCAAGAAAAGCAAACCACAAATTTAAAAACC
AACAGACAGTACCGCTACAAGTAACTACTGTACCGAGGAGTGGAAGAGAG
CGGAGCTTCACGTGCTCAGCAGCAGACCGGTCAGGTTCGTTTGCCGGGTG
TGACGGGAAACACTCCGGCACCCACTGCTGTAAATGGTCTAATAATGGTT
CTGCCCTGGCGTTCGCTTCGGTGAAGGTCATGGGGGGACAATACACTATG
CCATCCTCCAGCCAGGCCATGGCCGCCACTACCAGCAACTTTGTTTACGA
AGGCGCGAGCAGGAGCTTGTAGAACGGAATGCTGCGGTTGAAGTGTTGCA
GCTGCACCATGTCGGCGTCGGCATGAAGAGCACCGGGTCTACGGTGCAGG
GATGTCTGTCTCCCGGCACTACTACTGCAGTTGACTTGACATTGCTGCTC
GTGCGTGAAAGGTGTGAAGCAGCTGTGTGCTATAGTTGTACCTCGCGAGT
ATGACTACTGTCCTCGGCAGAGGAAACTCTTCCTCATATTGTTTTTGAAC
TTCTTACACCCGTAAGTGTCGGAGTCTTGGCCCACCCCCTAGACTGACTT
TCCAGGCTCGATTGCTCCGCAACCAAGAGGATTTGAACACCGACCGACAC
GTCTAAAGAAAGCTCTCGACGAGATCTTTCGAAAACCGCCCTTTTCGGCA
TTGGCGCCCTCTTGGTTGTGGAGCAGCAATCGAGCCTGGAAAGTCAGTCT
AGGGGGTGTGCCAAGACTCCGATACTTACGATAACTTTCGGTATACTATG
TAATATTTTACACTAAACTACTATTTAATACTGTATGAGAGCTGCGGCGA
TCCTATACGACGTACGCGTGTTTCGAGTACAGTACTGTAATCGACTATAA
TAATGGTGCGGCGTGTGTCATAGATGATCTCGGGTCTCTGGTTCGGTTTT
GTATCTGGCCAATCTAGAAGTAAAGATCTACCCGGGGCTGGTTCTCCTGT
TTACAGTATTCTTTAAACTGCAAATAGAACCAAACTGAGCCAAACCAAAA
TCAGTCTTTTCTCTGGTGTATGAGAGCAATTAATTCAGCTTTACAAAAAG
ACCAAATTCCTAAAGATCCATTGGGTTTCGGTTTTCGGGATCAAAAGACC
AAAACCAAATGCAAGCTGGCTCTTTCGCAAACATCCTATTATTTGTATTT
CGGTGTTCAGGCCGTTATGGTCCACAAAACTTTATTTCTGGGCCCGAAAT
TTTCTGGGCCTGGTGACAAAACTGCCCAGATACCCACACATTTGCCCGAG
ATATCTGGGGTTGAGAAACCGTGCACAGAAATTTATAACCCCTCCCCAAG
AAGATATTGTATTGCATTGTACTACACAGCCAGGCTGTTGTCGTGGTCGA
TGCACAGCAGTATCTGTGTGTATAAATGTTGTGTACAACTAGCAATCGTC
CCCGCTTTAAAGACGCACATGTTTTTTTTTCAGAAAAGCGTCTTTAGGGT
TTCAGGGGGCGATATCTCACTATCCCCGGATCAATGGAGGCATTTTAGAT
GTCAAACGATGCGCCTTGATTGCAGCGCGAAAGGGCAGCATAGACGAGGT
GGCGGGCAAGCCGGGGCACCTTGTCGAACGTTTGTTCAATGCTACACTCA
AGTTGTAATTGTTGTGAACGTTTGTTGGCACTATAACAGGTTGGTCTCCG
GCATACAATCGGCCCACGTTACAACAGCACTGTACCTCTGCGCGGTAGGC
TAGTGCTACACAGGGATGCAGTCACAACATGCGACTTTCTCAAACCAAGA
AATATTTTTTGCACAATAGCAGCAGTGCGTGTGCTGCACAAAAAATGCAC
TATCCCTTCTTTCACAAATCGCGAATAGTTGCCTGCCTGCACCTGCCCCG
GCTCCTTCCTTCCCTTTATGCTTGATGATGACTTGACGTGAGTCTCATGA
GTGAACGAATGCACAGCTTTCGAAAGAAGGTACTGCTTGTGTTTCGCTGC
ATTTGCCCATCCCTTCCTTTTCGCGTGCAAGTAGGAGCGAACTTCATCAA
AACGAGAGTGAACCTCAGCCTCTCTCTCTCTGATGGACGATGTAATGTAA
TGCACGACCGCAAAAACCATGCATCCACCGGCACGGGCACTATTAGTATT
AATAATGCACTTCCGTGGAAAAGCCTCTTCAAGGTTTCAGGGGACGATGT
CTCACTATCCCCGGAATCAATGGAGGCGTTTTATATGTGAAACGATGCAC
CTTTATCGTGCTTGTAGGTTCTCCGCCTGGCTTGTTGCCAGAGGACGATA
TCTCACTATCCCCGGGATCAATGGAGGCGTTTTATATATGAAACGATGCA
CCTCTATCGTGCATGTAGATTCTCCGCCTGGCTTGTTGCCACACACACAC
CAGCAGATGACGCACCAACTGATAAAAGGAACCTGTTCATACCCACACAC
ACATAGTCGCAGCATCAGATCAGATTTCTCTCTGTCCTCTGTGTACAGAG
GTAGGTGCCTCTTCCCGTGTGTTTTGCGGGGGGGGGGCATGAGATAAAAT
AACCTCCCCCCCCCGCCTCCCCTTCATGTATTTTTGAAATCGCGGGGTAC
CTTGGTTCTGAAAAAAAATCTCGTCTTTGACGCGGAAAGTTGACTTAACC
GGAGCATCTATAAAGCGGGGACGACTGTACCAGGTATCGGATATCAGCTG
AGAGGTGGCTGATCTGGCGGCAGTCCGCTTGTTGTCTGACCGCAGCAGTC
ACTGTGTGTACGAACTCCAACCACCGAACAGATATTGGTCGGTGGTTGGC
CATACCGGAAGTGATGGTTGGCCAACCGGAATGGAAAGAAATAAACAGAA
AACGAGTGTCTTGCTGTTTGGCTTGGGTGGTGGTTCGACAAAATCACCCA
TGTGTGGTAAATAGGAGCGCTCCCTCTTGTGTGGTAAATAGGCGCGCTCC
CTCTTCTGTTGATTCGTTCGCCTCCACAGGTATTTGTAGCTTCACTGTAG
CACATAGATACTGTTGACAGGTGTTTTAACCTTTTTCGGCGCAACCTCTT
TTGTTTAAAGAAAAATCAGAACGCGCCTAGACCTTCTGAGCATTGTTTCA
TTCGCCTCCACAGGTATTTGTAGTTTCACTATAAGCACATAGATACTGTT
GACAGGTGTTTTAACCTTCGGCATGCGGCTTGTCTGTTGTTGGTGTGCAT
ATCTATCATCTGACACCAATTGGTAGGTACATACAGCCGAAATACACAGC
AGCCGCGTCGCCTGCGTATTGTCTGCCGCCGGGCCAGATTGTACGTTTCG
CGAAAAATCCGCTCTTGGCTGTCCTTATGGCTGTGCCGATATTGTATTTA
TTTATTTTTATATGTCCCCTTCTCGTCGAAGTTTCTTATTAATACTAATA
TTAATATTAATACTAATACCAACACTAATAATAATATTAATACTATTATT
AGTCCTTAGTTATTAATAGGGTTTGATACACAAGTGCGAGGCGTATGCGA
CGTCTTGGCGAGGTGACTGTTTCCGTCAGCATTTTTCTTGTGTGCATGCT
GGATGGAGAGATCATAAAATAAATAAAAACTCTCTTCGGTGTTGATAGGT
AGAAGTTAAAACTGCTCAAAAGGAGGGAAATAAACACGGTGTAGAATGAC
CACATAGTCTCTGGCGAAACCTGAAGGGATTGTATACGCAGTACACAATG
TTTCTGTTAAAAAATGTAGATCTATGAGAGAGTAGACTATGACATGGAAG
GCCGAAAAAGAGAGAGGGCCAAAGCTCTGCAAGCCCCTTTTTTTTGTGGG
TCATAACGGCTGTCAAAAAACGTGAGCACATATTTTGGGGGGGGAGGGTT
TCGAGCACAGAAATGAAGACATTTATGTGCTAAGTTTTTGTGCGCTGTTT
TCCCCTAACGGTTGGCGTGAGTAAATTTCACCTTCTACACACTATATGAA
ATTGCTATGGTTGACGAGGTGTACCGTATGAGTGCTGAACTTTAACGGTA
TACCGTTGAAAAGTTAAGTATATTAAATTGTAAGAGGCGTATAAACCGGG
GAGAGATGGGTAGATTAGATCCTCTAGGGTAGGGTACAACCCGCCGTGGT
GTGACACATATTTTTGCTTTTCCGTTTACACTGCAAGTAAAATCAATGGA
CTTATAGACGCCTCCAAGGGGTTTCCGGTGAACGATATACCATAGAAAAG
TTAATAAAAAGCTTACGATTGTAGTAAATTTGATTTATAAGAAGCGTATA
AACCGAGGAGAGATGGGTAGATTAGATCCTCAGGGTAGGGTACAACGCGC
CGTGGTGTAACACACAAGTGTACAGTATAACGGTGGGCTTCTCCTCGACA
TTATACTGTTGACCGAATGTTACTACCATCGGGGCACCCGTTTAAATGCC
ATGAAGAGATTTTGTCTTTGCAGCCTATGATCCCACCTAAGAGTTTCGAC
ATTTTTCCCCCTGTGTGGAATGCTCAGAAGGTCTAGATGCGTTCAGATTT
TTCCTCAAACATATGTTTTTGCTTTTTCGTTTACACTGGAAATAAAATCA
ATGAACTTAAATGCCTCCAAGGGGTTTACGGTTCATATTCGCGGGGCCGT
TTCTGATGCTGTACCACATGGTTTTTAGAATAAATCGCGCATCGGGTTGA
AGGTTCCTTTCGGACAGCAGTAGGCGGGATGGGCAGCGTTACTTTTTTGT
AGCTCACACGTCCACTTTTTATTTTATTTTATTTTTTCTTCAATCTCACT
TATAGCCAATGGACCTCATCATTAGCGTCCTGCCCGTGGTCACTAAGGAT
CTTCCCATCTCTCCCCGGTTCACGCCTTACGATTTTTTATCGCGATGCAA
GTTCAGCACTCTTACAACTCGTCAACCAATGGTTGAGTTTTAGTTACTCA
CGTTCCCACGCTTTCCGTTACGAAAGAAAGAACACAAATCCTACTTTGGT
AAGAATCGAACTCACGACTTCCGCACTAACAGGTGTGCATTTTACCTACT
AGACCACTCGGGCGACATACATATCAATATTGATTGTAAATGTAGGAAAA
AGAGAGGCGCATAAAAAATTGGTCCATGGTAAAACCTGAAAATGCGGTAC
CCGTAACTGGGACTACCTTGAGGACTACTGGCCCTGTGCGAGAGGACTCT
CGGCAGTGGACGCCATCGGTACGCAATTGCATGACCCGATATAACGCAAT
CGGATTGACCCGATGACGGTTGGCGGTATATGTAGACGCCGTCGCGGTAA
GCGGGAGGAATCCCGTGAGTAAGCACCAGATTCAGCATGAGTGTGGACGA
TGAGCAGGCTGACGCGGGACGGGGCGGCCTGTCTCACGATATCGAGTTCT
CAGGCGCGAATGGGAACAGAGAAATTTTTACTGTCCCTGTTAGCTAGCCA
CGAGCAGGATTGGCAACGGTACCCGGTTGATCCATACTCTGCTGAAGTGC
TGACCTTAGATATAGTATAGATATAGTATACAGTATGTACAGTAGTAGGC
GGGATGGGCAGCGTTACTTTCTTGCATTACCATGACGTTGATAGAAAAAA
CATACTATTTAAAGAGGTCTCTCTGTGCAGTAGTTGTACAACTACTTGTC
TGGTACGGTTTAGTGGGCACAAGCACCAGTGACAAAAACAACACTTTGAA
GACGGTTGCGGCTAACCTTGAGAGAGAGAAAATTAAATGGGATTTAATAC
TCAAGTCGTAGACAAAAACTCATGTACGCTCTCGCGACCTCTTTAAAGAC
AAAGAAACACGGACGACGAAGAAAGCAAAGAAACCTTGCTGCGATAGCCG
TTGTAGATTTGGTACCTGTACAACGGGAAAAAACGGGCCTATCGAGCAAC
GATCCTTGGTCCCGTTCGGGCGGAGTTCGCCTAGAGGTCTTGGTATTCAG
TCACATGTTCGGCGTAGGGAGTGTCCTCTTTGTGTGTGTGTGTGTGTGTG
TCTCCTTCCGTCGGTAGGGACTGTCCTCTGTGTGTGTGTGTGTGTGTGTA
TTTATTAAATTGCACATAACCACGCAATCCGGCCCTGTCATCCTAGTCAT
TCTATGCCACTCGCATTGATCCTCCCGAGGGGGGATCAATAATACTTATG
TGTGTGTGTGTGTGTGTGTGTGTGTGTATTTATTAAATTGCACCTAACCA
CGCAATCCGGCCCTGTCATCCTAGTCATTCTATGCCACTCGCATTGATCC
TCCGGAGGGGGGATCAATGTGTGTGTGTGTGTGTGTGTGTGTCCTTCCGT
CGGTAGGGACTGTCCTCTGTGTGTGTCTTTTTACTTCAATGAATCAATAG
GGACTGTTCTCTGTGTGTGTGTGTGTGTATCTCCTTCCGTCGGTAGGGAC
TGTCTTCCGTGTGTGTCTTTTTACTTCAATGAATCAATTCGGTCCTTGGA
GAAATTCTTGGTGGGAAGTAGTTGTGTATTACACCAATATAAAGTATTAG
TAGTAATAGAGCTATAGTGTTAATAGTAGTAATAGAGCTATAGTGTTAAT
AGTAGTAATAGAGCTATAGTGTTAATAGTAGTCCCTACCGACGGAACTAA
CTACCGACGGAACGAACTAACTCTGCCAGTATAATAATAGAACAGACGGC
AGAGTTAGTTCGACCGCTGGCGTAATGTATTAATAAAATGTATTGATGAA
TCGAGGAACGAATGGATGAATGAAAAAAGGTGGCCAGAAACATGGATGCG
GCTGCAGCAGCGTACGAGCGAGCGGCAGAGAACTTCGAGAAGGCGAACAG
CGCCCACGAGTCGGCGAGATCGCATGTCGAGGCAGCCAAGTGCAAGAAAG
AGGCGGGGTCATCGGAGGCAGTAGACTCCTACCGTAAGGTATGTGCTGTA
CGCTGCTATGCTATTCTGTATATGGCTCTATAGCTCGCTTTCATGACTAC
TTGGAAGACTGCTACCGTAAGGTATGTGCTGTGTACGCTGCTATGCTATG
CTGTATATGGCTCTGTACGACTACTTGGAAGCGTAAGCCAAAGTATATCT
TGAGCAGATGCAATATATCAAAACGGCATTGCATTTATAATACATGATAC
ATCCTTGTAAGCACAACACAGAAAAGAGAGTACACTATCGATAGATAATA
GATATTGGTACCAGGTGTACTGTAGCTATGTAAGGGTTGGCAGCGATTAC
GCTGAAATTATTATAAAATAATCATAATTTTTGATTGGTTGGTTTTGGTT
GTGCTTTGTACCCAGTGTACCCTAGAAATCAACATGAATCTTGCTGCATA
GAGCTACCCTACTAAGGTCCAGTATATAGTTTTGAGTTGGCCGTGCAATT
CTCTCGTTTTTTTGGTATTTTGTTCTAGGGACAGGGAAGAGTTGGTACAA
AACCGGAAGCAGGGGGGTGGAATACAGCTAAAATATACTTATTTACTATA
TAGACTATACGTTGCAGACTAGAGCCTAGAGGCATGGTGTTGCACCCAAA
GCGTTATTTTTCCATTTACAGAACAGGAGAACTACAGGGCGTTTTTTTTT
ATGCCGTATTCTGTACAATGGTATATTGTACGGTCTCCGTAGCTTACAGA
AGAAAAATATGTATTCGTAAATTATAGTAGTAAACGGCAGTACACATGGC
AGGTGATCGTCGCCATCGCCAAAGAATTAGATGCCATGAACGTTCTACCG
TGGGCAAATACTTGACGTTCTCCAGCGGATTGTTTAGCACGGCATTCGAT
CTATCGATCGGTTATATTGCACCCAGGCCCAGCCTGGTTGTGGAGAATGA
GCAGACTGGTGGCGGGACGAGACAGTCACACCTGTCTCGCGAGACCAAAT
TCTCGCGCGCGAACGAGAACAGGGAAGATTCGTTCATTTTCCCTGTTCTG
CTGCCCTACGAGGACAGGATCGGCAACCGTAGACAGTCGTTGGATCCCAA
CAGGCCATGAGTGATGACCAAGATAACATTCAACAACTCTTCCTTGTGTG
CGCGTTTGTGTGTGTGTGTGTGGAGCATTGCAGGCGATCGAGATCTTCAA
CGAGTCCGGGCGTTTTCAGCAGGCTGGCAAGATGCTGACGGAAATCGGAG
ACATTTATAAGGAGGAGGGGAATTATAGCGAGGCTGTGGAAGCTTGGCAA
GAGGCCTCCGACTATCTCGCGGTGCGCTCCCTCCCCCTCCTTGACCATAT
CATGTTTTATACTGTACGCCAGTAACTTTCTCTGTGCGCCAACCGTCTTT
CCCCGTCTTGATATCGTGTTTTAATACTGTACGCCAATAACTTTCTCTGT
GCGCCAACCGCCTTTCCCCGTCTTGCTATCGTGTTTTATACTGTACGCCA
GTAACTTTCTCTGTGCGCCAACTGCCCTTCCCCATATTGCTATCGTGTTT
TATACTGTACGCCAATAACTTTCTCACGCTTTCCTTTCCTCCGCTACGGA
CGCCAGAGTAAAAAAAAAGTAATTTTGTCAAGTCAAGCATCGAACTCATG
ATTTCGGTCTGCGAGGTTACCGCTGTACCACTCGGGCAACTGTAGGAAGG
CTCAATACGACCGTTGATTTCATCAAAGCGTGCCCCGTGTGAACGTCTCT
CTTTGTGCCTCTCCCAGAGCGAGAACTCGAGCTCTCAGGCGAACGCGTGC
TTGGTTAAGGTGGCGGCTGCGGTATCCAAGGTCAGCTAAATCTCAGGAGA
AAGCTTCATACTTTCTTCGCACTCTATTTACAACATAAAACTTCAAATGT
GCTGTACTGTGTATATGGTGTTCGCAATATAGAGGGCTTTGCGGGAAAGG
AGATGTTTTGTTTTGTCGATTTACGCGCGACATTTTGTAGATGAGGTCCA
ATCGAGAAAACAGCCAACTATTGTACTGCAGCGTTGCGGGAAAGGTGTGC
GTAGATTCCACGGTAGAACGGCTAGCTCTATACGTCGTGCCCCGCTATGA
TACTGTAGAAAGAATTGGTCGCTACGAGTACTGTAGACGCCACCTGTATG
ATATGTAATGAATGAGCTAACCTCTCGCCTCCTTGGTTCTCTTTGTCCGA
ACCTTTACCCTAGCCCTCACTCTGAATCTGCCCTCCAAGAGCAACTGGTA
ACTACGAATACATGCCGTTTCCGGCTTAATTGTTGCCGTAGCTCCAGGGC
TAATGTCTGTGATGCTGTATCTAGTCGTATCAACAGTCGTTTTGTCTGAT
GTCTGATGTTGTGATTTTACTGGTGGGGGTGGTGAAACAGGACATGGAGC
CGCCGCAGCTCGGCCGTGCGGCGACGATCTACGAAAGGCTTGGGAGATCT
TGCATGGAGAAGAAGCTCTTGCAGATGAACGCCAAGGGGTACTGGCTGCA
GGCAGGGTTGTGTCTCCTGGGTGAGATTTGCTCGTTCGTTACGTCACGTC
ACCTCCACCCCCTTTTGGATACCTTTTAGATACATTTTAGATGCCTTTTA
GATACCTTTTAGATACTTTTTAGGTACCTTTTAGATACTTTTTAGATGCC
TTTTTAGATACCTTTTAGATACCTTTTTTAGATACCCTTTAAATACATTT
TTAGATACCTTTTCAGATACCTTTTTAGATACCTTTTAGATACATTTTCA
GATCCTTTTAGATACATTTTTAGGTACCTTTTAGATAAATTTTAGGTGCC
TTTTAGATACCTGATATTTTGCAAACGGAGCTTGATCTGCTGTACACCCA
TGGATACTTCGTCGTACATACGGTGTAGTAAATAAATTGAGCCGGTGGGT
TTATCGTGGAATATGTCACAGTTCCATACTGTTTTTTAGTATATATGTAT
GTGTGTACGATTGACTATCATCCGTTCGTTTGAACACAGTGCGTAGCGTG
TCTGGGGCCTTTTCTTGAGTCCATCATACTGTTATATACTTGTAATATTT
TATAGTATGTATGTATAGATGTATGGTCACACATATAGCAAGGGTATGGA
TCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAA
ATTGAATTATTTCCCTGTCCGCGCTCGCGCCTAAGAATTTGGTCTCGCGA
GACGGGTTCGGCAGTCCCGTCACGCGTCAGCCTGCTCATCTTTATACTCA
AGCTGAATCTGGTGCTTACTCAGGGGATTCCTCCCGAGTTCCGCGGCATC
TGTCACAAATCTATTTTTTGAATGCATTGGATGATCCTCGTGAGCTGCTG
CACTCGACAGACATACAGCAGCGCTTGTAACGCGCTTCGACATGATGAAG
TAGCTGGCTGTGATGTGACTTGTAGACATATACCTGCATCTCTTGTTACG
ATGTAACTGTCACTTTTATTACGATGTTTAAAGAAAAGTCAGAACGCGCC
TAGACCTTCTGAGCATCCCCTAGTCAGGGGGGAAAATGTCAAAACGTTTA
GGTGGGATCACAGGCTGCAAATACAAAACCTCTTCATGGCATTTAAACGG
GTTGCCCTATGGTAGGAACATTGGGTCAACAGTATAATGTCGGGGAGCAG
CCCACCGTTATACTGTACACTTACATTAATCGCCATGCAGGGACACCAGA
CAAGATTTTTCTTTTAAACACCAGAAAAACATTAACAACGCACCAGAAAC
AATGTAGTACACCATCACACATGGTAGTAGTAATATACTAATAACATTAC
ATAGGCTATAAATACAAAGCCACTACAGGGTATTTAAACGGGTTCCCCAA
TGGTAGTAACCTTGGGTCAACAGTATAATGTCGGGGAGAAGCCCACCGTT
ATACTGTACACTGCACAGCCACCAGTCATAACCCAACACACCCACTGTAG
TACATAGTTACGAGGGTAGTATTGATGTCGACAATAGTACCATCGAACCA
TACAAGAATAGGGGCTTGGGTAAACAGAAAAATGTACCACTTAGTATACT
GTACAATATCATTAATTGCCATGCACGGGTATCGCACAAACACAGAATAC
ACGCGAAGCGTGGGTTACAGCTCTGTTTAAAGAAAAATCAGAACGCGCCT
AGACCTTCTGAGTTTTTTTGTTGCAACGTAACTGTAACTGTAACTGTTCA
ACAGCACAAGGGGACACCGTGGGGGCTCGGCAAAAGCTGTCGGATTTCAC
TGACGCAGATCACACCTTCGAAGATTCGCGAGAGTTCAGGTGTGATACTT
TGTATATTTCGCGTTGCTCGCACTTCCCAATCACGCGTATCTATTGTACA
GTACTGTAGCTCCTATAACAACTACAGTGTAGTGAAAATTTACTGTAGTC
TAGTCTAGTGTACTGTAGTATAGTATAGTGTAGTGTGTGTAGTGTAGTGA
AAGTTTACTGTAATCTAGTGTACTGTAGTGTGTGGTGTACTAGAGTGTGT
GTAGTCTAGTGTACTATAGGGTGTGTAGTCTAGTGTACTGTAGTATGTGT
AGTGTACTATAGTGTGTGTAGTCTAGTGTATTGTAGTGTGTGTAGTGTAC
TATAGTGTGTGTAGTGTACTATAGTGTGTGTAGTCCAGTGTACTGTAGTG
TGTGTAGTGTACTATAGTGTGTGTAGTGTACTATAGTGTACTGTTGCGTG
TGTAGTCTAGTGTACTGTTGTGTGTGTAGTCTAGTCTACTGTAGTGCAGT
GTTATGTTGTGCTGTGTTGTGTTGTGTAGATATTGGGTTCAATTGAAGCA
AGGCTTACGTGACGATGACCTCGGTGTTGATGATGTTTGTGCACGTACCA
GATTCTTCCAGAACCTGATCCAGGCGTCGGAGGACAATGACGTTGAGGCG
CTTTCGCAGCACTGCTTCGAGTACGACGAGGTATGGTGTAGATGATTTGA
TGTCCTATCATGGACAGATGTACAGACAGTAATAACAAACACGTTACTTG
TACTCAGAGTGTTATGTAATCACTTGTGTAATAATGTAATAATAAAGCAC
ACAGAACAGTACCGACCACTATTGTAGTGTGAAGTAAGTTGAACAAGCGT
GTAATGAAAATAAATATATATATATATATATATATTTATACTGTGTGTAG
GCGTTGTAGCTGTAGTATGTACTATGATATCCACAGGGCGGAGATGCGAT
CACAACCAGAAAGGGTGCTTGAGTTGTTTGCTGTAAGGTGTTTTACCTCT
CTGCGCCGTTTTTTACTCCTCCATGATAAAAGTACATCACAGTACAGTAC
ATGCCCGTGCTTAGCAAGACTTTGCGTAACATATGTTTTAATGTATGCAG
AACATTTTTTCCCGCCTATGTATGATTAACGAAGTTGTCGTCACGTGCCA
AGCCCAGTACTCCTATTGTAGGAGTAAAAATATAGGAGCTTTGTCTTAGG
GGAAACAGCGATTAAAATATGCGATGATCTTGCATCCAACCGAAGCGTTT
TATTACATCGCGGCCAAGCTATTAATAAATAGGCTTGTTTTGGCCAAGCG
TCGGACAGGATGTAGGGCATGTTCAAGCACATGAGGTACAGATATGTTGC
ACATCCTTGTCCGTCGCCCTTGAAAAAAAACTCCCAACATTTTCTTGGAT
TGTTGGTTTTGGTACAGATATCGAAGCTGGATCCGTGGAAGACGAGCATG
TGTCTTCGCATCAAGCGTTCCATCGAGGCCATGGCTGACCCGGACAACGA
AGACATAGACTTGCGGTGATTCGTGTCTTCTTTTGTTGGCTTCAGCTGTA
GACTCGTGCTTTTCGATCAAGTTTATACTGCGATGCAAGTTTTTTTTGTT
CTCTGTCTGGTTGTCTTTCGTAGCGCCTTTCCTCGACGTACTTGATTGAT
CCTTCGAGCGGCCGTTGCTCTAACCTAAAGTGCGGCGACTGTCTTTTCCC
AGGCTTGGCGGGAACGATTCCTCTCGGGAACACTTACCATGATAGATGTA
TCTGTCTATGGGACTCTGGTGGAGACGGGGAGATGATTTTGAGTGTTGTT
AGCCACAGTAGATTCGGTCAAAAGGTGTACTGACTGTCCCAGTTGGACCG
TTCCCGTTTACAGTATCTTGTGTTTTGAACCGACGGGTGGGTCTAGTCTA
ATACTCCGGAGTATGCACTATGCACCATTCACTACACACAAGGGTTGGCA
TTCGATCGGAGGTTTGAGTTCTAGTGCTTCCCGAAGTGTTGCGTCGTACT
CGAGAGGAATCGGGGACGTCCTGTTTGGCGATATAACGTCGTGGCTGTGG
AGACTCGAGGCGGGAAATTTATTTCGCGTAAGTGGACTAAACCGCCTTGC
CAAAATTGCACAGAAGAGTGTTTAAAGAAAAATCGTTGCCGGA
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig903:102405..118147-

>mRNA_A-nodosum_M_contig903.14.2 ID=mRNA_A-nodosum_M_contig903.14.2|Name=mRNA_A-nodosum_M_contig903.14.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=909bp|location=Sequence derived from alignment at A-nodosum_M_contig903:102405..118147- (Ascophyllum nodosum dioecious)
ATGGCTATGTCCAGTGGGCGAGATAACGAGGCTAAAGCGGCGCGGTTCAT
GGAAGACGGCGAGAAGTGCTTGACGAAGTGGTCTCTGTTCGGCTCCAGCA
CCAAATTCGAGGATGCTGCCGAGTTGTTTGAAAAAGCAGGCCGACTCTAC
AAGGTGGCCAGAAACATGGATGCGGCTGCAGCAGCGTACGAGCGAGCGGC
AGAGAACTTCGAGAAGGCGAACAGCGCCCACGAGTCGGCGAGATCGCATG
TCGAGGCAGCCAAGTGCAAGAAAGAGGCGGGGTCATCGGAGGCAGTAGAC
TCCTACCGTAAGGCGATCGAGATCTTCAACGAGTCCGGGCGTTTTCAGCA
GGCTGGCAAGATGCTGACGGAAATCGGAGACATTTATAAGGAGGAGGGGA
ATTATAGCGAGGCTGTGGAAGCTTGGCAAGAGGCCTCCGACTATCTCGCG
AGCGAGAACTCGAGCTCTCAGGCGAACGCGTGCTTGGTTAAGGTGGCGGC
TGCGGTATCCAAGGACATGGAGCCGCCGCAGCTCGGCCGTGCGGCGACGA
TCTACGAAAGGCTTGGGAGATCTTGCATGGAGAAGAAGCTCTTGCAGATG
AACGCCAAGGGGTACTGGCTGCAGGCAGGGTTGTGTCTCCTGGCACAAGG
GGACACCGTGGGGGCTCGGCAAAAGCTGTCGGATTTCACTGACGCAGATC
ACACCTTCGAAGATTCGCGAGAGTTCAGATTCTTCCAGAACCTGATCCAG
GCGTCGGAGGACAATGACGTTGAGGCGCTTTCGCAGCACTGCTTCGAGTA
CGACGAGATATCGAAGCTGGATCCGTGGAAGACGAGCATGTGTCTTCGCA
TCAAGCGTTCCATCGAGGCCATGGCTGACCCGGACAACGAAGACATAGAC
TTGCGGTGA
back to top