mRNA_A-nodosum_M_contig900.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: A0A6H5K223_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K223_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 5.120e-12 Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 40 EDVEIPTEE---EPVLYTYLGCYQD-ETERIFSGNVLFRYQELTIEFCAGFCQGSAYFGTQYGQECWCGEA 240
+ VE PT EP TYLGCY D +T+RIF V +T+ FCA FC AY+GTQYG+ECWCG +
Sbjct: 64 DPVETPTPVAVIEPTDPTYLGCYVDSQTDRIFP--VTTASDVMTLAFCADFCAEYAYYGTQYGEECWCGNS 132
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: A0A6A6XW66_9PLEO (WSC domain-containing protein 2 n=1 Tax=Melanomma pulvis-pyrius CBS 109.77 TaxID=1314802 RepID=A0A6A6XW66_9PLEO) HSP 1 Score: 68.6 bits (166), Expect = 1.180e-11 Identity = 34/91 (37.36%), Postives = 48/91 (52.75%), Query Frame = 1
Query: 16 LPCG----DLCGEDVEI---------PTEEEPVL--YTYLGCYQDETE-RIFSGNVLFRYQELTIEFCAGFCQGSAYFGTQYGQECWCGEA 240
+PC +LCG + P P + YTY GCY D R+ + LF + ++T+ CAGFC G YFG +YG++CWCG+A
Sbjct: 690 MPCAGNRAELCGAGYRLTVFKSLTLYPAPSNPAISGYTYSGCYIDNVNVRVLGDSFLFAH-DMTVPMCAGFCAGKKYFGVEYGEQCWCGDA 779
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: A0A6G1GAA0_9PEZI (WSC-domain-containing protein n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1GAA0_9PEZI) HSP 1 Score: 64.3 bits (155), Expect = 3.570e-10 Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 55 PTEEEPVL--YTYLGCYQDETERIFSGNVLFRYQE----LTIEFCAGFCQGSAYFGTQYGQECWCGEA 240
P ++ P + Y Y+GC D +R G E +++E+CA FCQG+ YFG QYGQEC+CGE+
Sbjct: 373 PADDGPTVQGYEYIGCANDSHDRTLKGATTIYTAEAGPLMSLEYCADFCQGTTYFGVQYGQECFCGES 440
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: A0A6A6P5T9_9PEZI (Uncharacterized protein n=1 Tax=Lineolata rhizophorae TaxID=578093 RepID=A0A6A6P5T9_9PEZI) HSP 1 Score: 63.9 bits (154), Expect = 5.040e-10 Identity = 31/62 (50.00%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 55 PTEEEPVLYTYLGCYQDET-ERIFSGNVLFRYQELTIEFCAGFCQGSAYFGTQYGQECWCGE 237
P E Y+Y+GC D R+ LF Q LT+E CA FC GS YFGT+YGQEC+CG+
Sbjct: 914 PANAEIPGYSYVGCKTDSVGARVLDAMTLFDAQ-LTVEMCADFCDGSTYFGTEYGQECYCGD 974
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: A0A2T2P2A1_CORCC (Heme peroxidase n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2P2A1_CORCC) HSP 1 Score: 63.5 bits (153), Expect = 6.890e-10 Identity = 28/53 (52.83%), Postives = 33/53 (62.26%), Query Frame = 1
Query: 79 YTYLGCYQDETE-RIFSGNVLFRYQELTIEFCAGFCQGSAYFGTQYGQECWCG 234
Y Y GCY D R+ + N LF +TI CA FC GS YFGT+YG EC+CG
Sbjct: 955 YNYTGCYTDSVSARVLTDNFLFDGSAMTISKCAEFCNGSKYFGTEYGSECYCG 1007
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: UPI001900F19C (glyoxal oxidase precursor n=1 Tax=Colletotrichum karsti TaxID=1095194 RepID=UPI001900F19C) HSP 1 Score: 62.8 bits (151), Expect = 1.280e-9 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 4 NIYYLPCGDLCGEDVEIPTEEEPVL--YTYLGCYQDET-ERIFSGNVLFRYQELTIEFCAGFCQGSAYFGTQYGQECWCG 234
N+Y LP G L + T V+ ++Y C+ D R S NVLF ++T+E CA FCQGS YFG ++G+EC+CG
Sbjct: 346 NVYALPTGSL-----QATTNPTGVIKGFSYQSCWIDNVLGRSLSDNVLFA-DDMTVEKCAAFCQGSKYFGLEFGKECYCG 419
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: G2QYK5_THETT (Uncharacterized protein n=2 Tax=Thermothielavioides terrestris TaxID=2587410 RepID=G2QYK5_THETT) HSP 1 Score: 61.6 bits (148), Expect = 3.120e-9 Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 10 YYLPCGDLCGEDVEIPTE--EEPVL------YTYLGCYQDETE-RIFSGNVLFRYQELTIEFCAGFCQGSAYFGTQYGQECWCG 234
Y CGD +V + +E +EP ++Y C+ D+ R + NVL R ++T+E CA FCQGS+YFG +YG+EC+CG
Sbjct: 304 YNNVCGDADRLNVFLTSECKDEPANVPSVDGFSYKSCWTDDVNNRSLADNVL-RSDDMTVEKCAAFCQGSSYFGVEYGRECYCG 386
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: D8LEK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 3.150e-9 Identity = 31/79 (39.24%), Postives = 40/79 (50.63%), Query Frame = 1
Query: 4 NIYYLPCGDLCGEDVEIPTEEEPVLYTYLGCYQDETERIFSGNVLFRYQELTIEFCAGFCQGSAYFGTQYGQECWCGEA 240
N+Y P D P +E P LGCY D+ E +++ +T E C C+GS YF TQYG+ECWCG A
Sbjct: 282 NVYLYP-DDSTPSPTPSPIQEGPS--PALGCYADDPEDRIMDDLVLSDSSMTTELCELTCEGSTYFATQYGRECWCGSA 357
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: A0A163GAF0_DIDRA (Heme binding n=1 Tax=Didymella rabiei TaxID=5454 RepID=A0A163GAF0_DIDRA) HSP 1 Score: 61.2 bits (147), Expect = 4.480e-9 Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 43 DVEIPTEEEPVLYTYLGCYQDETE-RIFSGNVLFRYQELTIEFCAGFCQGSAYFGTQYGQECWCGEA 240
++ +P + Y Y GCY D+ R+ + +VL R +T+E CA C GS YFGTQ+G EC+CGE+
Sbjct: 854 NIAVPANPTILGYGYKGCYTDDVNARVLTSSVL-RDDGMTVERCASACAGSYYFGTQHGDECYCGES 919
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Match: UPI001E8E664E (heme peroxidase n=1 Tax=Emericellopsis atlantica TaxID=2614577 RepID=UPI001E8E664E) HSP 1 Score: 60.8 bits (146), Expect = 6.100e-9 Identity = 33/77 (42.86%), Postives = 43/77 (55.84%), Query Frame = 1
Query: 4 NIYYLPCGDLCGEDVEIPTEEEPVLYTYLGCYQDETERIFSGNVLFRYQELTIEFCAGFCQGSAYFGTQYGQECWCG 234
++Y P D+ G D E P YT+ GCY D + + E+T E CA FC+G AYFGT+YGQEC+CG
Sbjct: 784 SLYMNP--DIQGGDPEQPLTVGN--YTFEGCYTDSSASRALDDKRTAGSEMTNEVCAAFCEGFAYFGTEYGQECYCG 856 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig900.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig900.1.1 >prot_A-nodosum_M_contig900.1.1 ID=prot_A-nodosum_M_contig900.1.1|Name=mRNA_A-nodosum_M_contig900.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=82bp NNIYYLPCGDLCGEDVEIPTEEEPVLYTYLGCYQDETERIFSGNVLFRYQback to top mRNA from alignment at A-nodosum_M_contig900:6913..8127- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig900.1.1 ID=mRNA_A-nodosum_M_contig900.1.1|Name=mRNA_A-nodosum_M_contig900.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1215bp|location=Sequence derived from alignment at A-nodosum_M_contig900:6913..8127- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig900:6913..8127- >mRNA_A-nodosum_M_contig900.1.1 ID=mRNA_A-nodosum_M_contig900.1.1|Name=mRNA_A-nodosum_M_contig900.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=246bp|location=Sequence derived from alignment at A-nodosum_M_contig900:6913..8127- (Ascophyllum nodosum dioecious)back to top |