mRNA_A-nodosum_M_contig90.41.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: D7G7P0_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P0_ECTSI) HSP 1 Score: 241 bits (615), Expect = 5.540e-80 Identity = 118/137 (86.13%), Postives = 127/137 (92.70%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDWTG 411
SGMQSP SFGGFACLTRHVKRIS+ALSEALE DLLDK+SLG+VNAYQP+LTSTWMFQKSMSVGVGE VD NLIVDLLAN+FKSMD+LGNPVLKPFLQDV+QF PLARVLAGVT APLSIPPLLLHVG++P DW G
Sbjct: 5 SGMQSPLSFGGFACLTRHVKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVDANLIVDLLANNFKSMDKLGNPVLKPFLQDVVQFGPLARVLAGVTLDAPLSIPPLLLHVGIVPLADWIG 141
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE) HSP 1 Score: 234 bits (598), Expect = 2.330e-71 Identity = 114/137 (83.21%), Postives = 125/137 (91.24%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDWTG 411
SGMQSP SFGGFACLTRH+KRIS+ALSEALE DLLDK+SLG+VNAYQP+LTSTWMFQKSMSVGVGE V NLIVDLLAN+F+SMD+LGNPVLKPFLQDV+QF PLARVL GVT APLSIPPLLLHVG++P DW G
Sbjct: 471 SGMQSPLSFGGFACLTRHMKRISEALSEALEGDLLDKKSLGLVNAYQPSLTSTWMFQKSMSVGVGERVGANLIVDLLANNFRSMDKLGNPVLKPFLQDVVQFGPLARVLVGVTLDAPLSIPPLLLHVGIVPLADWIG 607
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: A0A150GR87_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GR87_GONPE) HSP 1 Score: 164 bits (416), Expect = 8.070e-46 Identity = 77/137 (56.20%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDWTG 411
SG+QSP SFGGF LTRH+ R++ AL+EALEAD +D+ SLG+V+AY P L+S+WM QK+MSV +G+T P LI +LA +FK+M++LG PV+KPFLQDVIQF P+ + + PLSIP L+ HVG P ++W G
Sbjct: 324 SGLQSPLSFGGFGALTRHLARLTDALTEALEADCVDRGSLGLVHAYNPGLSSSWMMQKAMSVRLGDTPSPQLINRMLAGNFKAMERLGEPVMKPFLQDVIQFGPMVQTMGAQMLTDPLSIPGLIAHVGPGPLLEWLG 460
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: A0A836C4K2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C4K2_9CHLO) HSP 1 Score: 164 bits (415), Expect = 6.870e-45 Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDWTG 411
SG+QSP SFGGF LTRH+ R++KALSEALEADLLDK SLG V AY P L+S+WM Q++MSV G+ P+LI +LA +F+SM + G+PV+KPFLQDVIQF P+ L F P SIP L+ HVG P ++W G
Sbjct: 468 SGLQSPLSFGGFGALTRHLARLNKALSEALEADLLDKASLGRVAAYNPGLSSSWMMQRAMSVRQGDAPTPDLINRMLAGNFRSMQRFGDPVMKPFLQDVIQFGPMMTTLTAQMFGDPASIPRLISHVGPGPLLEWVG 604
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: A0A8J4AY36_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4AY36_9CHLO) HSP 1 Score: 163 bits (412), Expect = 1.390e-44 Identity = 76/137 (55.47%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDWTG 411
SG+QSP SFGGF LTRH+ R++ AL+EA+E D LD+ESL +V+AY P L+S+WM QK+MSV GE P+LI +LA +FK+M++LG+PV+KPFLQDVI+F P+ R + PLSIP L+ HVG +P ++W G
Sbjct: 440 SGLQSPLSFGGFGALTRHLARLTTALAEAVETDALDRESLALVHAYNPGLSSSWMMQKAMSVRKGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVIKFGPMMRTMTAQMLTDPLSIPGLISHVGPMPLLEWLG 576
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: D8THU2_VOLCA (Uncharacterized protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8THU2_VOLCA) HSP 1 Score: 157 bits (398), Expect = 1.810e-43 Identity = 74/135 (54.81%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDW 405
SG+QSP SFGGF LTRH+ R++ AL+EA+EAD LD+ SL +V +Y P L+S+WM QK+MSV GE P+LI +LA +FK+M++LG+PV+KPFLQDV+QF P+ R +A P SIP L+ HVG P ++W
Sbjct: 285 SGLQSPLSFGGFGALTRHLARLTAALTEAVEADALDRGSLSLVQSYNPGLSSSWMMQKAMSVRRGEQPPPDLINRMLAGNFKAMERLGDPVMKPFLQDVVQFGPMMRTMAAQILTDPASIPSLIRHVGPAPLLEW 419
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: A0A7S4DCS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCS5_HETAK) HSP 1 Score: 157 bits (397), Expect = 1.160e-42 Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDWTG 411
SG+QSP SFGGF CLTRH+ R++ AL++ + D L +E L +VNAYQP L+ WMFQK+MSV VG+ P ++V L N+F +M+ G+PVL+PFLQDV+QF L + L PL++PPLL HVGL +DW G
Sbjct: 364 SGIQSPLSFGGFVCLTRHIGRLTGALADCVRLDRLSREDLALVNAYQPNLSGAWMFQKAMSVAVGQRAAPGIVVRTLQNNFGAMNSFGDPVLRPFLQDVVQFDLLLKTLVQAFILDPLAVPPLLFHVGLPALIDWMG 500
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: A0A8J9RAY4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RAY4_9CHLO) HSP 1 Score: 157 bits (398), Expect = 1.190e-42 Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDW 405
SG+QSP SFGGF LTRH+ R+ A++EAL+A+ LDK+SL VNAY P L+ WM Q++MSV GE DPN I LLA +F +M + G+PVLKPFLQDV+Q+ PL L + PL +P + HVG+LP +DW
Sbjct: 430 SGIQSPLSFGGFGALTRHLGRLRSAITEALDAEALDKDSLAQVNAYNPGLSGAWMLQRAMSVRPGERPDPNFINSLLAKNFAAMQRFGDPVLKPFLQDVVQYGPLGLTLVSQMLSDPLFVPAIFRHVGVLPMLDW 564
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: A0A7S3PA49_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PA49_9STRA) HSP 1 Score: 148 bits (373), Expect = 7.270e-42 Identity = 73/137 (53.28%), Postives = 95/137 (69.34%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDWTG 411
SG+QSP SFGGF LTRH++RIS A+ +AL DLL KE LG +NAY P L++TWMFQ+SMSV +G++VD + LLA +F+ MDQ G +KPFLQDV++F L LAG A P +P ++ HVG+ DW G
Sbjct: 50 SGIQSPLSFGGFGALTRHLERISGAVHDALADDLLHKEDLGKINAYTPNLSATWMFQRSMSVRMGQSVDSKFVNRLLATNFEQMDQAGLRTIKPFLQDVVRFDGLVSSLAGSFVADPTFMPQIIAHVGVPALADWLG 186
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Match: A8HX01_CHLRE (Glycine/D-amino acid oxidase-like protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HX01_CHLRE) HSP 1 Score: 153 bits (386), Expect = 2.300e-41 Identity = 71/137 (51.82%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 1 SGMQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSTWMFQKSMSVGVGETVDPNLIVDLLANSFKSMDQLGNPVLKPFLQDVIQFAPLARVLAGVTFAAPLSIPPLLLHVGLLPRVDWTG 411
SG+QSP SFGGF LTRH+ R++ AL+EA EAD LD+ SLG+++AY P L+S+WM QK+MSV G+ P LI +LA +F++M++LG +KPFLQDVIQF P+ + PLS+P L+ HVG P +W G
Sbjct: 337 SGLQSPLSFGGFGALTRHLARLTNALTEAAEADALDRNSLGLIHAYNPGLSSSWMMQKAMSVREGDKPPPELINRMLAGNFRAMEKLGEATMKPFLQDVIQFQPMLATMGAQILTDPLSVPSLMAHVGPGPLAEWLG 473 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig90.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig90.41.1 >prot_A-nodosum_M_contig90.41.1 ID=prot_A-nodosum_M_contig90.41.1|Name=mRNA_A-nodosum_M_contig90.41.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=135bp MQSPFSFGGFACLTRHVKRISKALSEALEADLLDKESLGMVNAYQPALTSback to top mRNA from alignment at A-nodosum_M_contig90:639074..641954- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig90.41.1 ID=mRNA_A-nodosum_M_contig90.41.1|Name=mRNA_A-nodosum_M_contig90.41.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2881bp|location=Sequence derived from alignment at A-nodosum_M_contig90:639074..641954- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig90:639074..641954- >mRNA_A-nodosum_M_contig90.41.1 ID=mRNA_A-nodosum_M_contig90.41.1|Name=mRNA_A-nodosum_M_contig90.41.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=405bp|location=Sequence derived from alignment at A-nodosum_M_contig90:639074..641954- (Ascophyllum nodosum dioecious)back to top |