mRNA_A-nodosum_M_contig90.30.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: D7FZW9_ECTSI (Vacuolar protein sorting-associated protein 29 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZW9_ECTSI) HSP 1 Score: 371 bits (953), Expect = 7.480e-130 Identity = 178/189 (94.18%), Postives = 185/189 (97.88%), Query Frame = 1
Query: 1 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKAA 567
MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQY+DLRTLAPNVHVVRGDFEEST+FPE+KVVQIGQFRVGL HGHQIVPWGDPNAL M QRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSA+E++AVPSFILLAVQG KCVTYVYELHGDQVEVSKSEFSKA+
Sbjct: 1 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTTFPETKVVQIGQFRVGLTHGHQIVPWGDPNALAMTQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSAVESDAVPSFILLAVQGAKCVTYVYELHGDQVEVSKSEFSKAS 189
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: A0A7S2BTX2_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BTX2_9STRA) HSP 1 Score: 312 bits (800), Expect = 1.510e-106 Identity = 144/190 (75.79%), Postives = 169/190 (88.95%), Query Frame = 1
Query: 1 MAG-DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKAA 567
MAG DFGEL LV+GD HIPHR A IPEKFK+MLVPNKMQHVLCTGNLV K+Q+D+ R+LAPN+H+VRGDF+E ++FPE+KVVQIGQF++GL+HGHQ+VPWGDP AL QR++ DILISGHTH+N+VNE+ G+WFINPGSITGAYSALET+ VPSFILLAVQG K VTYVYEL GDQV VSKSE++K A
Sbjct: 1 MAGSDFGELALVIGDCHIPHRAAGIPEKFKRMLVPNKMQHVLCTGNLVSKEQFDEFRSLAPNMHIVRGDFDEQSNFPETKVVQIGQFKIGLVHGHQVVPWGDPLALAQVQREMDVDILISGHTHKNEVNEYEGKWFINPGSITGAYSALETDVVPSFILLAVQGNKVVTYVYELKGDQVNVSKSEYTKKA 190
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: A0A7S2S7P2_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7P2_9STRA) HSP 1 Score: 307 bits (786), Expect = 1.980e-104 Identity = 141/187 (75.40%), Postives = 167/187 (89.30%), Query Frame = 1
Query: 1 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSK 561
MA DFGELVLV+GD+ IPHR A+IPE+FK+MLVPNKMQHVLCTGNLV K+Q+D+ R+LAPN+HVV+GDF+++ FPE KVVQIGQFR+GLIHGHQ+VPWGDP AL+ QRQ+ DI+ISGHTHRN+VNE+ G+WFINPGSITGAYSA E + +PSFILLAVQG K VTYVYELHG++VEVSKSEF K
Sbjct: 1 MASDFGELVLVVGDVLIPHRAASIPEQFKRMLVPNKMQHVLCTGNLVTKEQFDEFRSLAPNMHVVKGDFDDNPLFPEQKVVQIGQFRIGLIHGHQVVPWGDPIALSTVQRQMDVDIIISGHTHRNEVNEYEGKWFINPGSITGAYSATEPDVIPSFILLAVQGNKVVTYVYELHGEKVEVSKSEFQK 187
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: A0A7S3HCY7_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCY7_9STRA) HSP 1 Score: 306 bits (784), Expect = 3.720e-104 Identity = 141/185 (76.22%), Postives = 163/185 (88.11%), Query Frame = 1
Query: 10 DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKA 564
DFGEL LV+GD HIPHR A IPEKF++MLVPNKMQHVLCTGN+V K+QYD+L+ LAPNVHVVRG F+E ++FPE KV+QIGQF++GLIHGHQIVPWGD ++L + QRQL DILI+GHTHRN+VNE+ G+WFINPGSITGAYS L TE PSFILLA+QG K VTYVYELHGDQV+VSKSEF KA
Sbjct: 3 DFGELALVVGDFHIPHRAAGIPEKFQRMLVPNKMQHVLCTGNVVTKEQYDELKGLAPNVHVVRGGFDEDSTFPEYKVIQIGQFKIGLIHGHQIVPWGDAHSLAVIQRQLDVDILITGHTHRNEVNEYEGKWFINPGSITGAYSTLTTEVTPSFILLAIQGSKVVTYVYELHGDQVDVSKSEFCKA 187
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: A0A7S2FLA0_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLA0_9STRA) HSP 1 Score: 304 bits (778), Expect = 6.100e-103 Identity = 141/185 (76.22%), Postives = 162/185 (87.57%), Query Frame = 1
Query: 10 DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKA 564
DFGELVLV+GD HIPHR A IPEKFK+MLVPNKMQHVLCTGNLV K+QYD+ R LAPN+H+VRGDF+ES+SFPE+KVVQIG F++GL HGHQIVPWGDP AL QRQL DIL++GHTH+N+VNE+ G+WFINPGSITGAYSALE++ SFILLAVQG K VTYVYEL D+VEVSKSEF K+
Sbjct: 22 DFGELVLVVGDCHIPHRAAMIPEKFKRMLVPNKMQHVLCTGNLVTKEQYDEFRNLAPNMHIVRGDFDESSSFPETKVVQIGNFKIGLAHGHQIVPWGDPLALAAVQRQLDVDILVTGHTHKNEVNEYEGKWFINPGSITGAYSALESDVTASFILLAVQGNKVVTYVYELRDDKVEVSKSEFQKS 206
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: A0A7S3NIH3_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIH3_9STRA) HSP 1 Score: 299 bits (766), Expect = 2.130e-101 Identity = 138/188 (73.40%), Postives = 160/188 (85.11%), Query Frame = 1
Query: 1 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKA 564
M+ DFGELVLVLGD+HIPHR A IPEKF++MLVPNKMQHV+CTGNL ++QYD+LR LAPN+HVV GD +E SFPE K+V +GQFR+G+IHGHQIVPWGD N+L M QR+L DILISGHTH+N V EF G+WFINPGSITGAYS+LE E PSF+LLA+QG K V YVYELHGD VEVSKSEF K+
Sbjct: 1 MSKDFGELVLVLGDVHIPHRCAFIPEKFQRMLVPNKMQHVICTGNLCTREQYDELRALAPNIHVVAGDMDEGLSFPEHKIVTVGQFRIGVIHGHQIVPWGDKNSLAMTQRRLDVDILISGHTHKNLVQEFDGKWFINPGSITGAYSSLEPEVTPSFVLLAIQGKKVVIYVYELHGDNVEVSKSEFQKS 188
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: A0A835ZKD1_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKD1_9STRA) HSP 1 Score: 283 bits (725), Expect = 8.200e-95 Identity = 134/194 (69.07%), Postives = 162/194 (83.51%), Query Frame = 1
Query: 7 GDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTS--FPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEA-----VPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKAA 567
GDFGELVLVLGD+HIPHR AAIPEKF++MLVPNKM+HVLCTGNLV KD+Y++LR LAPNVHVV GDF++S + +PESKVV IG +R+GL+HGHQ+VPWGDP AL++ QRQL DIL+SGHTHRN+V GRW +NPGSITGAYS + + VPSF+LLA+QG +CV YVYEL G QV+V+KSEF+K A
Sbjct: 2 GDFGELVLVLGDLHIPHRAAAIPEKFRRMLVPNKMKHVLCTGNLVTKDRYEELRALAPNVHVVSGDFDDSAAAAWPESKVVHIGAWRIGLVHGHQVVPWGDPAALSILQRQLDCDILVSGHTHRNEVRAHEGRWLVNPGSITGAYSPIASAPAAEPIVPSFMLLAIQGARCVAYVYELRGGQVDVTKSEFTKDA 195
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: A0A485KLT9_9STRA (Vacuolar protein sorting-associated protein 29 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KLT9_9STRA) HSP 1 Score: 281 bits (720), Expect = 2.390e-94 Identity = 128/187 (68.45%), Postives = 156/187 (83.42%), Query Frame = 1
Query: 1 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSK 561
MA DFGELVL++GDMHIPHR IPEKFKKMLVPNKMQHVLCTGN+V K+Q+D+LR LAPNVH+VRGDF+E ++P+ KV+ IGQFR+GL HGHQIVPWGD ++L QR+L DIL++GHTH+ +++ G+WF+NPGSITGAYS T+ VPSFIL+A+QG K V YVYEL GD V VSKSEF+K
Sbjct: 1 MAADFGELVLIVGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNMVTKEQFDELRDLAPNVHIVRGDFDELCNYPDKKVITIGQFRIGLCHGHQIVPWGDADSLAALQRKLNVDILVTGHTHQYKLHAQNGKWFVNPGSITGAYSNCTTDVVPSFILMAIQGPKIVAYVYELKGDNVVVSKSEFTK 187
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: A0A067CJI0_SAPPC (Vacuolar protein sorting-associated protein 29 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJI0_SAPPC) HSP 1 Score: 277 bits (708), Expect = 1.400e-92 Identity = 127/187 (67.91%), Postives = 153/187 (81.82%), Query Frame = 1
Query: 1 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTSFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSK 561
MA DFGELVL++GD HIPHR IPEKFKKMLVPNKMQHVLCTGNLV K+ +D+LR LAPNVHVVRGDF+E+ +FP+ KVV IGQ+R+GL HGHQIVPWGD ++L QR++ DIL++GHTH+ +++ G+WF+NPGSITGAY + VPSFIL+A+QG K V YVYEL GD V VSKSEFSK
Sbjct: 1 MAADFGELVLIVGDYHIPHRAMDIPEKFKKMLVPNKMQHVLCTGNLVTKETFDELRELAPNVHVVRGDFDENATFPDKKVVTIGQYRIGLCHGHQIVPWGDVDSLAALQRKMNVDILVTGHTHQYKLHAQNGKWFVNPGSITGAYGNFTPDVVPSFILMAIQGNKVVAYVYELKGDNVVVSKSEFSK 187
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Match: A0A1V9ZFC7_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFC7_9STRA) HSP 1 Score: 273 bits (698), Expect = 5.520e-91 Identity = 128/189 (67.72%), Postives = 154/189 (81.48%), Query Frame = 1
Query: 1 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEE--STSFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSK 561
MA DFGELVLV+GD+HIPHR IPEKFKKMLVPNKMQHV+CTGNLV K+Q+D+LR LAPNVHVVRGDF+E ST+FP+ KV+ IGQFR+G+ HGHQIVPWGD ++L QR+L DILI+GHTH +++ G+WF+NPGSITGAYS + +PSFIL+AVQ K V YVYEL D V VSKSE++K
Sbjct: 1 MAADFGELVLVVGDLHIPHRALDIPEKFKKMLVPNKMQHVVCTGNLVTKEQFDELRDLAPNVHVVRGDFDEVESTTFPDKKVITIGQFRIGICHGHQIVPWGDVDSLAALQRKLNVDILITGHTHEYKLHTQNGKWFVNPGSITGAYSNFTPDVIPSFILMAVQANKVVAYVYELKNDNVVVSKSEYTK 189 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig90.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig90.30.1 >prot_A-nodosum_M_contig90.30.1 ID=prot_A-nodosum_M_contig90.30.1|Name=mRNA_A-nodosum_M_contig90.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=197bp MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDback to top mRNA from alignment at A-nodosum_M_contig90:411285..412313+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig90.30.1 ID=mRNA_A-nodosum_M_contig90.30.1|Name=mRNA_A-nodosum_M_contig90.30.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1029bp|location=Sequence derived from alignment at A-nodosum_M_contig90:411285..412313+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig90:411285..412313+ >mRNA_A-nodosum_M_contig90.30.1 ID=mRNA_A-nodosum_M_contig90.30.1|Name=mRNA_A-nodosum_M_contig90.30.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=591bp|location=Sequence derived from alignment at A-nodosum_M_contig90:411285..412313+ (Ascophyllum nodosum dioecious)back to top |