mRNA_A-nodosum_M_contig90.19.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: A0A8J2WSX8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSX8_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 5.990e-17 Identity = 41/64 (64.06%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 1 CKSQDVSHFAAFFIVVGAKTSVAETS-------------YGNDPSAGSPTETLLRLHLPLNVEV 153
C S VSHFAAFFIVVGAKTS ++ YGNDPSAGSPTETLLRLHLPLN E+
Sbjct: 1 CNSHYVSHFAAFFIVVGAKTSAGKSCMAFSLLSKPEDGYYGNDPSAGSPTETLLRLHLPLNSEL 64
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: F0YAU5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAU5_AURAN) HSP 1 Score: 74.7 bits (182), Expect = 1.070e-16 Identity = 40/58 (68.97%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 1 CKSQDVSHFAAFFIVVGAKTSVAET-------SYGNDPSAGSPTETLLRLHLPLNVEV 153
C S VSHFAAFFIVVGAKTS ++ NDPSAGSPTETLLRLHLPLN EV
Sbjct: 1 CNSHYVSHFAAFFIVVGAKTSAGKSCMAFRLIKISNDPSAGSPTETLLRLHLPLNSEV 58
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: F0XYG7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYG7_AURAN) HSP 1 Score: 75.1 bits (183), Expect = 1.460e-16 Identity = 40/58 (68.97%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 1 CKSQDVSHFAAFFIVVGAKTSVAE-------TSYGNDPSAGSPTETLLRLHLPLNVEV 153
C S VSHFAAFFIVVGAKTS + T+ NDPSAGSPTETLLRLHLPLN E+
Sbjct: 1 CNSHYVSHFAAFFIVVGAKTSAGKKYTEVRGTNKSNDPSAGSPTETLLRLHLPLNSEL 58
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: F0XYK3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYK3_AURAN) HSP 1 Score: 73.6 bits (179), Expect = 5.960e-16 Identity = 39/58 (67.24%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 1 CKSQDVSHFAAFFIVVGAKTSVAET-------SYGNDPSAGSPTETLLRLHLPLNVEV 153
C S VSHFAAFFIVVGAKTS ++ NDPSAGSPTETLLRLHLPLN E+
Sbjct: 1 CNSHYVSHFAAFFIVVGAKTSAGKSCMAFRLIKISNDPSAGSPTETLLRLHLPLNSEL 58
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: A0A6A5KWQ8_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KWQ8_LUPAL) HSP 1 Score: 74.7 bits (182), Expect = 2.270e-14 Identity = 43/82 (52.44%), Postives = 48/82 (58.54%), Query Frame = 1
Query: 1 CKSQDVSHFAAFFIVVGAKTSVAETSY-------------------------------GNDPSAGSPTETLLRLHLPLNVEV 153
C SQDVSHFAAFFIV+GAKTSVAE++ GNDPSAGSPTETLLRLHLPL+ E+
Sbjct: 291 CNSQDVSHFAAFFIVIGAKTSVAESAEASLHQTETKVPRVNISPSSCESETSVFCFGCGNDPSAGSPTETLLRLHLPLDDEI 372
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: R1BK99_EMIHU (Uncharacterized protein (Fragment) n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BK99_EMIHU) HSP 1 Score: 60.5 bits (145), Expect = 1.220e-10 Identity = 37/64 (57.81%), Postives = 39/64 (60.94%), Query Frame = 1
Query: 1 CKSQDVSHFAAFFIVVGAKTSVAE---TSYG----------NDPSAGSPTETLLRLHLPLNVEV 153
C S VSHFAAFFIV AK S+ T YG NDPSAGSPTETL RL LPLN +V
Sbjct: 1 CNSHYVSHFAAFFIVARAKISIGRSCGTGYGATSVWVGKTGNDPSAGSPTETLSRLLLPLNDKV 64
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: M2MHS9_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2MHS9_BAUPA) HSP 1 Score: 59.3 bits (142), Expect = 1.820e-10 Identity = 33/47 (70.21%), Postives = 34/47 (72.34%), Query Frame = 2
Query: 14 TYRISLRSSS*WEPRHPSLK-----PRMVMILPQVHLRKPCYDFTFL 139
TYRISLRSSS EPR P LK P VMI PQVHLR+PCYDF FL
Sbjct: 26 TYRISLRSSSMPEPRDPLLKVGPGGPCSVMIPPQVHLRRPCYDFYFL 72
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: M2Q0E7_CERS8 (Uncharacterized protein n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2Q0E7_CERS8) HSP 1 Score: 58.5 bits (140), Expect = 7.840e-10 Identity = 33/59 (55.93%), Postives = 37/59 (62.71%), Query Frame = 1
Query: 1 CKSQDVSHFAAFFIVVGAKTSVAET--------SYGNDPSAGSPTETLLRLHLPLNVEV 153
C S +SHFAAFFIV K S+ + NDPSAGSPTETLLRL LPLN +V
Sbjct: 6 CNSHYLSHFAAFFIVARTKRSIGRMIINALKIEPFINDPSAGSPTETLLRLLLPLNDQV 64
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: Q7RFP9_PLAYO (Uncharacterized protein n=1 Tax=Plasmodium yoelii yoelii TaxID=73239 RepID=Q7RFP9_PLAYO) HSP 1 Score: 57.0 bits (136), Expect = 2.950e-9 Identity = 33/53 (62.26%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 1 CKSQDVSHFAAFFIVVGAKTSVAET-----SYGN-DPSAGSPTETLLRLHLPL 141
C +SHFAA FI VG KTS+ + SY N DPSAGSPTETLLRL LPL
Sbjct: 6 CNFHCLSHFAAAFIAVGTKTSIVKIYTIFKSYNNNDPSAGSPTETLLRLLLPL 58
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Match: M2QSQ3_COCSN (Uncharacterized protein n=3 Tax=Pleosporineae TaxID=715340 RepID=M2QSQ3_COCSN) HSP 1 Score: 54.7 bits (130), Expect = 1.510e-8 Identity = 34/56 (60.71%), Postives = 35/56 (62.50%), Query Frame = 2
Query: 14 TYRISLRSSS*WEPRHPSLK-------PRM-------VMILPQVHLRKPCYDFTFL 139
TYRISLRSSS EPR P LK PR VMI PQVHLR+PCYDF FL
Sbjct: 26 TYRISLRSSSMPEPRDPLLKVVIITFRPRSQAFIFCCVMIPPQVHLRRPCYDFYFL 81 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig90.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig90.19.1 >prot_A-nodosum_M_contig90.19.1 ID=prot_A-nodosum_M_contig90.19.1|Name=mRNA_A-nodosum_M_contig90.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=52bp CKSQDVSHFAAFFIVVGAKTSVAETSYGNDPSAGSPTETLLRLHLPLNVEback to top mRNA from alignment at A-nodosum_M_contig90:307177..307755+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig90.19.1 ID=mRNA_A-nodosum_M_contig90.19.1|Name=mRNA_A-nodosum_M_contig90.19.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=579bp|location=Sequence derived from alignment at A-nodosum_M_contig90:307177..307755+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig90:307177..307755+ >mRNA_A-nodosum_M_contig90.19.1 ID=mRNA_A-nodosum_M_contig90.19.1|Name=mRNA_A-nodosum_M_contig90.19.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=156bp|location=Sequence derived from alignment at A-nodosum_M_contig90:307177..307755+ (Ascophyllum nodosum dioecious)back to top |