mRNA_A-nodosum_M_contig90.15.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig90.15.1
Unique NamemRNA_A-nodosum_M_contig90.15.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5KDS6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS6_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 3.550e-76
Identity = 140/276 (50.72%), Postives = 177/276 (64.13%), Query Frame = 1
Query:    1 LNIATWNVRTLSLTGRRGVGHAEVRLQKCKVLDCDVIGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNR 816
            L +ATWNVRTL++ G  G G A   L +    D  V+G+QETRR GRTEFA AG+RVFC G +  TG  G HGVG+AVKES+ + +T+T E  +E LM+M F L G   AV F+ AY PT+   +T + K VFW  L+S V R+PS + + VL+DANARTG R+   + +VIG YGRD  E + NG+ LL FA  N+LAL NTFF   K     T+NG    D KR+DYI+TRQ+H   V N+ V  QP     ADSDHN+V A + L GR A NR
Sbjct:  113 LRVATWNVRTLAVNGANGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFCCGTE--TG--GVHGVGIAVKESLCKTSTFTTEFIDESLMAMRFLLAGHRGAVNFVAAYAPTE--PSTADSKRVFWGKLDSLVRRIPSKECVHVLMDANARTGDRLDGGDGRVIGMYGRD--ELNDNGMLLLNFATGNRLALTNTFFETRKGGIWHTYNGVSGNDCKRLDYILTRQAHHGRVSNVVVIPQPVRPVKADSDHNMVVATINLGGRLAHNR 380          
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5K9G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9G5_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.800e-72
Identity = 135/292 (46.23%), Postives = 184/292 (63.01%), Query Frame = 1
Query:    1 LNIATWNVRTLSLTGRRGVGHAEVRLQKCKVLDCDVIGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAI 864
            + +AT+NVRTL++ G  G G A+  L +    D   +GLQE RRPGRTEF  +G+RVF  G D    + G HGVG+AV+E++ + + +T E  +ERLM+M F +TG   AV F+ AY PTD    T + K +FW  L+S V R+P+ +YLFVL+DANA+TG  +  EN + +G YGR+  E + NG  LL FA DN+LA++NTFF   +     TFNG    +R+ +DYI+TRQSHR  V N+ V  QP     ADSDHNIV A V L GR A NR  +    R+  +R+ +
Sbjct:   44 VRVATYNVRTLAVNGANGYGRADKVLHEAAKQDISFVGLQEVRRPGRTEFTASGFRVFTCGTD----KGGTHGVGIAVEEALCKASQYTTEYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVA--TADSKRMFWEKLDSLVRRIPAKEYLFVLMDANAQTGGGIAGENERTMGEYGRN--ELNDNGRLLLTFATDNRLAVLNTFFDTRRSGIWHTFNGPSGRERRCLDYILTRQSHRGRVSNMEVVPQPVRPVRADSDHNIVVATVDLDGRLAHNRSIRTNPKRRQFNRQDL 327          
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 3.930e-72
Identity = 142/292 (48.63%), Postives = 184/292 (63.01%), Query Frame = 1
Query:    1 LNIATWNVRTLSLTGRRGVGHAEVRLQKCKVLDCDVIGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAI 864
            L +ATWNVRTL++ G  G G A   L +    D  V+G+QETRR GRTEFA AG+RVFC G +  TG  G HGVG+AVKES+ + +T+T E  +ERLM+M   L G   AV F+ A  PT+   +T   K VFW  L+S V R+PS + ++VL+DANARTG R+   + +VIG YGRD  E + NG+ LL FA +N+LAL NTFF   K     T+NG    D KR+DYI+TRQ+H   V N+ V  QP     ADSDHN+V A V L GR A NR  +    +K  +R+ +
Sbjct:   58 LRVATWNVRTLAVIGVNGYGRAYSVLHEAARQDVSVVGMQETRRAGRTEFAAAGFRVFCCGTE--TG--GVHGVGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTE--PSTASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDRLDGGDGRVIGMYGRD--ELNDNGMLLLNFATENRLALTNTFFETRKGGIWHTYNGVSGNDCKRLDYILTRQAHHGRVSNVVVIPQPVRPVKADSDHNMVVATVNLGGRLAHNRAVRTKPKQKQFNRQEL 341          
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5KQZ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ7_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 5.840e-72
Identity = 137/292 (46.92%), Postives = 183/292 (62.67%), Query Frame = 1
Query:    1 LNIATWNVRTLSLTGRRGVGHAEVRLQKCKVLDCDVIGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAI 864
            + +AT+NVRTL++ G  G G A+  L +        +GLQE RRPGRTEFA +G+RVF  G D    + G HGVG+AV+E++ + + +T E  +ERLM+M F + G   AVTF+ AY PTD    T E K +FW  L+S V R P+ +YLFVL+DANA+TG  +  EN + +G YGR+  E + NG  LL FA DN+LA++NTFF   K     TFNG    +R+ +DYI+TRQSHR  V N+ V  QP     ADSDHNIV A V L GR A NR  +    R+  +R+ +
Sbjct:   74 VRVATYNVRTLAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTD----KGGTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVA--TTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTGGGIAGENERTMGEYGRN--ELNDNGRLLLTFATDNRLAVLNTFFDTRKSGIWHTFNGPSGRERRCLDYILTRQSHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDL 357          
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5JY99_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY99_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 3.620e-69
Identity = 132/292 (45.21%), Postives = 179/292 (61.30%), Query Frame = 1
Query:    1 LNIATWNVRTLSLTGRRGVGHAEVRLQKCKVLDCDVIGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAI 864
            + +AT+NVRTL++    G   A+  L +    D   +GLQE RRPGRTEFA +G+RVF  G D    + G HGVG+AV+E++ + + +T    +ERLM+M F +TG   AV F+ AY PTD    T + K +FW  L+S V R+P+ + LFVL+DANA+TG  +  EN   +G YGR+  E + NG  LL FA DN+LA++NTFF   +     TFNG    +R+ +DYI+TRQSHR  V N+ V  QP     ADSDHNIV A V L GR A NR       R+  +R+ +
Sbjct:   19 VRVATYNVRTLAVNLANGYRRADSVLHEAAKQDISFVGLQEVRRPGRTEFAASGFRVFTCGTD----KGGTHGVGIAVEEALCKASQYTTGYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVA--TADSKCIFWEKLDSLVRRIPAKECLFVLMDANAQTGGGIAGENEGTMGEYGRN--ELNDNGRLLLTFATDNRLAVLNTFFDTRRSGIWHTFNGPSGRERRCLDYILTRQSHRGRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIPTNPKRRQFNRQDL 302          
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 2.440e-68
Identity = 135/292 (46.23%), Postives = 183/292 (62.67%), Query Frame = 1
Query:    1 LNIATWNVRTLSLTGRRGVGHAEVRLQKCKVLDCDVIGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAI 864
            + +AT+NVRTL++ G  G G A+  L +        +GLQE RRPGRTEFA +G+RVF  G D    + G HGVG+AV+E++ + + +T E  +ERLM+M F + G   AVTF+ AY PTD    T E K +FW  L+S V R+P+ +YLFVL+DANA+TG  +  EN   +G YGR+  E + NG  LL FA DN+LA++NTFF   +     TFNG    +R+ +DYI+TRQ+HR  V N+ V  QP     ADSDHNIV A V L GR A NR  +    R+  +R+ +
Sbjct:  306 VRVATYNVRTLAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTD----KGGTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVA--TTESKHMFWEKLDSLVRRIPAKEYLFVLMDANAQTGGGIAGENEGTMGEYGRN--ELNENGELLLTFATDNRLAVLNTFFDTRRGGIWHTFNGPSGRERRCLDYILTRQAHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDL 589          
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 3.420e-68
Identity = 135/292 (46.23%), Postives = 182/292 (62.33%), Query Frame = 1
Query:    1 LNIATWNVRTLSLTGRRGVGHAEVRLQKCKVLDCDVIGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAI 864
            + +AT+NVRTL++ G  G G A+  L +        +GLQE RRPGRTEFA +G+RVF  G D    + G HGVG+AV+E++ + + +T E  +ERLM+M F + G   AVTF+ AY PTD    T E K +FW  L+S V R P+ +YLFVL+DANA+TG  +  EN   +G YGR+  E + NG  LL FA DN+LA++NTFF   +     TFNG    +R+ +DYI+TRQ+HR  V N+ V  QP     ADSDHNIV A V L GR A NR  +    R+  +R+ +
Sbjct:   19 VRVATYNVRTLAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTD----KGGTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVA--TTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTGGGIAGENEGTMGEYGRN--ELNENGELLLTFATDNRLAVLNTFFDTRRGGIWHTFNGPSGRERRCLDYILTRQAHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDL 302          
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 6.470e-68
Identity = 135/292 (46.23%), Postives = 182/292 (62.33%), Query Frame = 1
Query:    1 LNIATWNVRTLSLTGRRGVGHAEVRLQKCKVLDCDVIGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAI 864
            + +AT+NVRTL++ G  G G A+  L +        +GLQE RRPGRTEFA +G+RVF  G D    + G HGVG+AV+E++ + + +T E  +ERLM+M F + G   AVTF+ AY PTD    T E K +FW  L+S V R P+ +YLFVL+DANA+TG  +  EN   +G YGR+  E + NG  LL FA DN+LA++NTFF   +     TFNG    +R+ +DYI+TRQ+HR  V N+ V  QP     ADSDHNIV A V L GR A NR  +    R+  +R+ +
Sbjct:  510 VRVATYNVRTLAVNGANGYGRADSVLHEAAKQGISFVGLQEVRRPGRTEFAASGFRVFTCGTD----KGGTHGVGIAVEETLCKSSQYTTEYVDERLMAMRFEMMGHRGAVTFVAAYAPTDVA--TTESKHMFWEKLDSLVRRTPAKEYLFVLMDANAQTGGGIAGENEGTMGEYGRN--ELNENGELLLTFATDNRLAVLNTFFDTRRGGIWHTFNGPSGRERRCLDYILTRQAHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDL 793          
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5JX07_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX07_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 2.070e-62
Identity = 122/260 (46.92%), Postives = 162/260 (62.31%), Query Frame = 1
Query:   97 DCDVIGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAI 864
            D   IGLQE RRPGRTEF  +G+RVF  G D    + G HGVG+AV+E++ + + +T E  +ERLM+M F +TG   AV F+ AY PTD    T + K +FW  L+S V R+P+ + LFVL+DANA+T   +  EN   +G YGR+  E + NG  LL FA DN+LA++NTFF   +     TFNG    +R+ +DYI+TRQSHR  V N+ V  QP     ADSDHNIV A V L GR A NR  +    R+  +R+ +
Sbjct:   16 DISSIGLQEVRRPGRTEFTASGFRVFTCGTD----KGGTHGVGIAVEEALRKASHYTTEYVDERLMAMRFEMTGHRGAVNFVAAYAPTDVA--TADSKRMFWEKLDSLVRRIPAKECLFVLMDANAQTERGIAGENEGTMGEYGRN--ELNDNGRLLLTFATDNRLAVLNTFFDTRRSGIWHTFNGPSGRERRYLDYILTRQSHRGRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDL 267          
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Match: A0A6H5KFG7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG7_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 2.480e-62
Identity = 120/261 (45.98%), Postives = 163/261 (62.45%), Query Frame = 1
Query:  100 CDV--IGLQETRRPGRTEFATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSMTFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLALVNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY----ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAI 864
            CD+  +GLQE RRPGRTEF  +G+RVF  G D    + G HGVG+AV+E++ + + +T E  +ERLM+M F +TG   AV F+ A   TD    T + K +FW  L+S V R+P+ + LFVL+DANA+TG  +  EN   +G YGR+  E + NG  LL FA DN+LA++NTFF   +     TFNG    +R+ +DYI+TRQ+HR  V N+ V  QP     ADSDHNIV A V L GR A NR  +    R+  +R+ +
Sbjct:    2 CDISFVGLQEVRRPGRTEFTASGFRVFTCGTD----KGGTHGVGIAVEEALCKASQYTTEYVDERLMAMRFEMTGHRGAVNFVAACASTDVA--TADSKRMFWEKLDSLVRRIPAKECLFVLMDANAQTGGGIDGENEGTMGEYGRN--ELNDNGRLLLTFATDNRLAVLNTFFDTRRSGIWHTFNGPSGRERRCLDYILTRQAHRGRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDL 254          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig90.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDS6_9PHAE3.550e-7650.72Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9G5_9PHAE1.800e-7246.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBD7_9PHAE3.930e-7248.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQZ7_9PHAE5.840e-7246.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JY99_9PHAE3.620e-6945.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K319_9PHAE2.440e-6846.23Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K7U5_9PHAE3.420e-6846.23Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLM6_9PHAE6.470e-6846.23Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JX07_9PHAE2.070e-6246.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KFG7_9PHAE2.480e-6245.98Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig90contigA-nodosum_M_contig90:238862..239728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog6500.XP_005107471.1
PFAMsExo_endo_phos,Exo_endo_phos_2
Model size867
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.42e-20
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota,39VM0@33154|Opisthokonta,3BKMM@33208|Metazoa,3D1CS@33213|Bilateria
DescriptionEndonuclease/Exonuclease/phosphatase family
Cds size867
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870341.3942502-CDS-A-nodosum_M_contig90:238861..2397281680870341.3942502-CDS-A-nodosum_M_contig90:238861..239728Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig90 238862..239728 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig90.15.1prot_A-nodosum_M_contig90.15.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig90 238862..239728 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig90.15.1

>prot_A-nodosum_M_contig90.15.1 ID=prot_A-nodosum_M_contig90.15.1|Name=mRNA_A-nodosum_M_contig90.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=289bp
LNIATWNVRTLSLTGRRGVGHAEVRLQKCKVLDCDVIGLQETRRPGRTEF
ATAGYRVFCSGVDGSTGRAGQHGVGLAVKESIIREATWTQELTNERLMSM
TFNLTGKSNAVTFIVAYGPTDTVSNTREQKAVFWADLESAVSRVPSSDYL
FVLIDANARTGVRMGEENCKVIGAYGRDTRESDSNGISLLRFAGDNKLAL
VNTFFSVPKRCTSRTFNGTRPADRKRIDYIITRQSHRKLVRNITVHLQPY
ADSDHNIVCARVRLPGRFARNRKQQAPTGRKSIDRRAIT
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mRNA from alignment at A-nodosum_M_contig90:238862..239728+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig90.15.1 ID=mRNA_A-nodosum_M_contig90.15.1|Name=mRNA_A-nodosum_M_contig90.15.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=867bp|location=Sequence derived from alignment at A-nodosum_M_contig90:238862..239728+ (Ascophyllum nodosum dioecious)
CTCAATATAGCGACCTGGAATGTTCGTACATTGTCCCTTACGGGACGCCG TGGGGTCGGCCATGCGGAGGTGCGTTTGCAGAAATGTAAAGTGCTCGACT GTGACGTCATAGGACTACAGGAGACGCGAAGACCGGGGCGGACTGAATTC GCCACGGCAGGATACCGCGTGTTCTGTAGCGGGGTAGACGGGAGCACTGG TCGGGCTGGACAGCATGGGGTGGGGCTAGCTGTCAAGGAGTCTATCATCC GCGAAGCTACGTGGACACAGGAGCTTACGAACGAGCGCCTGATGTCGATG ACTTTCAACTTGACAGGCAAGTCCAACGCTGTCACCTTTATTGTGGCATA TGGCCCGACAGATACTGTGTCCAATACGCGGGAACAGAAGGCTGTGTTTT GGGCGGATTTGGAAAGTGCTGTTAGCCGAGTGCCCAGCAGCGACTATCTG TTTGTTCTCATAGATGCTAACGCTAGAACTGGTGTACGTATGGGAGAGGA GAACTGTAAAGTAATTGGGGCATATGGCAGGGACACACGAGAGAGCGACA GCAACGGAATCTCGCTTCTGCGGTTTGCGGGTGACAACAAGCTGGCCCTT GTCAATACATTCTTCTCCGTCCCCAAGAGATGCACGTCTCGTACATTCAA CGGTACCCGGCCCGCGGATAGGAAACGTATTGACTATATCATCACGCGAC AATCACATCGCAAGCTTGTCCGAAATATCACTGTTCACTTGCAGCCGTAT GCGGATTCTGACCACAATATTGTGTGCGCCAGAGTCCGACTCCCAGGGAG ATTTGCTCGTAATCGAAAACAGCAAGCCCCCACAGGGCGCAAGAGTATTG ACAGACGAGCAATCACG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig90:238862..239728+

>mRNA_A-nodosum_M_contig90.15.1 ID=mRNA_A-nodosum_M_contig90.15.1|Name=mRNA_A-nodosum_M_contig90.15.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=867bp|location=Sequence derived from alignment at A-nodosum_M_contig90:238862..239728+ (Ascophyllum nodosum dioecious)
CTCAATATAGCGACCTGGAATGTTCGTACATTGTCCCTTACGGGACGCCG
TGGGGTCGGCCATGCGGAGGTGCGTTTGCAGAAATGTAAAGTGCTCGACT
GTGACGTCATAGGACTACAGGAGACGCGAAGACCGGGGCGGACTGAATTC
GCCACGGCAGGATACCGCGTGTTCTGTAGCGGGGTAGACGGGAGCACTGG
TCGGGCTGGACAGCATGGGGTGGGGCTAGCTGTCAAGGAGTCTATCATCC
GCGAAGCTACGTGGACACAGGAGCTTACGAACGAGCGCCTGATGTCGATG
ACTTTCAACTTGACAGGCAAGTCCAACGCTGTCACCTTTATTGTGGCATA
TGGCCCGACAGATACTGTGTCCAATACGCGGGAACAGAAGGCTGTGTTTT
GGGCGGATTTGGAAAGTGCTGTTAGCCGAGTGCCCAGCAGCGACTATCTG
TTTGTTCTCATAGATGCTAACGCTAGAACTGGTGTACGTATGGGAGAGGA
GAACTGTAAAGTAATTGGGGCATATGGCAGGGACACACGAGAGAGCGACA
GCAACGGAATCTCGCTTCTGCGGTTTGCGGGTGACAACAAGCTGGCCCTT
GTCAATACATTCTTCTCCGTCCCCAAGAGATGCACGTCTCGTACATTCAA
CGGTACCCGGCCCGCGGATAGGAAACGTATTGACTATATCATCACGCGAC
AATCACATCGCAAGCTTGTCCGAAATATCACTGTTCACTTGCAGCCGTAT
GCGGATTCTGACCACAATATTGTGTGCGCCAGAGTCCGACTCCCAGGGAG
ATTTGCTCGTAATCGAAAACAGCAAGCCCCCACAGGGCGCAAGAGTATTG
ACAGACGAGCAATCACG
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