mRNA_A-nodosum_M_contig9.46.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 1.690e-121 Identity = 197/273 (72.16%), Postives = 233/273 (85.35%), Query Frame = 2
Query: 179 GDDISKEERAAIALQRAWKERLNYLYRKAVKQQGLCRERRDEMRQGLEIGCEPCASSGKKSTDIKFRYLKKAWRDTDKLLFEGMPMIQMYDRGDNWNERWQGALSLANKTDMEKRYRKSSLNAVYADFVHTARTYGRTIISEYFLHEYMKSVRAKKLGGVAGGEKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLETGVGLSVPPMCLLDYKGFRMLAQAELPIDLKTQKMGTSDGGKTVLNESPILNKRTAKAAKKLGLRAH 997
G +++ + AA+ALQRAW++R Y++ K +KQ+ LCR+ R EMR GL + CE C+S+GKKS DIK R KKAW+DTD+LLF+GM +QM DRGDNWN+RWQ ALSL NKT M+ Y++ SL+AVY+DFVHTA TYGRTIISEYFLHEYMKSV+ K+LGG+AGG+KYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYL TGVGL +PPMCLLDYKGFRMLAQA LP+ + KMGT+DGG+TVLN+ PIL+KRTA AAK LGLRAH
Sbjct: 5 GKEVNVDHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLHTGVGLCIPPMCLLDYKGFRMLAQAHLPLGETSLKMGTNDGGRTVLNDCPILDKRTAMAAKALGLRAH 277
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI) HSP 1 Score: 249 bits (637), Expect = 2.850e-65 Identity = 158/350 (45.14%), Postives = 203/350 (58.00%), Query Frame = 2
Query: 389 KAWRDTDKLLFEGMPMIQMYDRGDNWNERWQGALSLANKTDMEKRYRK-SSLNAVYADFVHTARTYGRTIISEYFLHEYMKSVRAKKLGGVAGGEKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLETGV-GLSVPPMCLLDYKGFRMLAQAELPIDLKTQKMGTSDGGKTVLNESPILNKRTAKAAKKLGLRAHKAGGEIKKEMYVDDLTGRRKQTKRNMGGKMLYAAADVEGHEGKDGRLYLIDLARAFPPEDPSATPHLSGMLSVSAKVVVKQDNPTGE----SATVTKAHGTL----LDYDILYPDGREERGIPVDLLRDLRLFVFYRLLRPEFVR 1408
++W +L+F M Q Y NWNE +Q AL L +T ++ YRK L V DF TA TYG+TIISEYFL KS+R K+LGGVAGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL T + GL CL+DYKGFRM AQA LP++ ++ + G+S+GGKTV NE L K+ AAKKL LR H+ V+D K +Y+A D+EGH G+ YL+D AR FPPE P HLS +LS V V +P + S TV L + Y + E + D + D V++R+LRPEFV+
Sbjct: 224 RSWERFRELVFPD-DMEQAYRETGNWNELFQSALDLPEETP-DQCYRKWERLTTVNRDFKATAVTYGKTIISEYFLETEHKSIRLKELGGVAGGMKFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSSNGGKTVHNEDESLAKKLKAAAKKLNLRTHR----------VND--------------KDMYSACDIEGHVGEGDSHYLLDFARTFPPESPKKVEHLSDILSDMTPVYVHIGDPPEKGIILSVTVPLDMHNLARKYIMYQVQLDSSNEVIEVCGDKVSDRHQSVYWRMLRPEFVK 547
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: A0A835YKN4_9STRA (CLU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN4_9STRA) HSP 1 Score: 229 bits (584), Expect = 4.190e-64 Identity = 125/254 (49.21%), Postives = 160/254 (62.99%), Query Frame = 2
Query: 425 GMPMIQMYDRGDNWNERWQGALSLANKTDMEKRYRKSSLNAVYADFVHTARTYGRTIISEYFLHEYMKSVRAKKLGGVAGGEKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLETGV-GLSVPPMCLLDYKGFRMLAQAELPIDLKTQKMGTSDGGKTVLNESPILNKRTAK-AAKKLGLRAHKAGGEIKKEMYVDDLTGRRKQTKRNMGGKMLYAAADVEGHEGKDGRLYLIDLARAFPPEDP 1180
G+P +++ D GDNWN +Q A +L T+ME+ Y+ L VY DF A YGRTIISE+FLH Y++S+R +++GG AGG+K+L+RGILFKLADG+ GP+ GSDEAAAKAAGHELRG S Y GV GL PMC+LDYKGFRM+ A+LP+ T G+SDGG V+ R + AA +L LR H G +Y+ ADVE H+G DG LY++DLAR+ PPEDP
Sbjct: 19 GLPRVKVEDLGDNWNALFQEAQALPEATEMERTYKHLLLATVYRDFTAAAVMYGRTIISEFFLHSYLRSIRPREVGGFAGGKKFLFRGILFKLADGAVGPWAGSDEAAAKAAGHELRGHSYYAHAGVAGLHFSPMCILDYKGFRMVCAAQLPLGAATLISGSSDGGINVVGVGDAEVARVLEEAAARLRLRPHPCRGTT------------------------VYSGADVEVHKGLDGNLYMLDLARSMPPEDP 248
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI) HSP 1 Score: 213 bits (543), Expect = 6.520e-59 Identity = 125/252 (49.60%), Postives = 157/252 (62.30%), Query Frame = 2
Query: 434 MIQMYDRGDNWNERWQGALSLANKTDMEKRYRK-SSLNAVYADFVHTARTYGRTIISEYFLHEYMKSVRAKK-LGGVAGGEKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLETGV-GLSVPPMCLLDYKGFRMLAQAELPIDLKTQKMGTSDGGKTVLNESPILNKRTAKAAKKLGLRAHKAGGEIKKEMYVDDLTGRRKQTKRNMGGKMLYAAADVEGHEGKDGRLYLIDLARAFPPEDP 1180
M Q Y NWNE +Q AL L T ++ YRK + V DF A TYG+TIISEYFL KS++ + LGG AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL+ + GL CL+DYKGFRM AQA LP+ +T + G+SD G+TV N+S L K+ AKKL LR H +V+D K +Y+A D+EGH G+ G YL+D AR+FPPE P
Sbjct: 1 MEQPYRETGNWNELFQSALDLPEDTP-DQCYRKWERMTTVNRDFKAAAVTYGKTIISEYFLDLKHKSIKPNENLGGSAGGMKFVWRGILFKLADGSRGPYLGNDEAAAKGAGHDLRGATHYLDARIRGLRYALQCLIDYKGFRMTAQAVLPVSSETLRYGSSDAGRTVHNDSENLAKKLKAVAKKLNLRTH----------WVND--------------KEMYSACDIEGHVGEGGSHYLLDFARSFPPESP 227
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: A0A835ZAL9_9STRA (CLU domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL9_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.910e-46 Identity = 106/234 (45.30%), Postives = 138/234 (58.97%), Query Frame = 2
Query: 485 ALSLANKTDMEKRYRKSSLNAVYADFVHTARTYGRTIISEYFLHEYMKSVRAKKLGGVAGGEKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLETGV-GLSVPPMCLLDYKGFRMLAQAELPIDLK-TQKMGTSDGGKTVLNESPILNKRTAKAAKKLGLRAHKAGGEIKKEMYVDDLTGRRKQTKRNMGGKMLYAAADVEGHEGKDGRLYLIDLARAFPPEDP 1180
A++ A + + ++Y+ +L A+ DF+ A TYGRTIISEYFL E KSV +GG+AGG K+L RGILFKLADGS+GPY GSDEAA KA ++L+GA ++ + GL L+DYKGFRM AQA+LP+ + T + G+ D G TV++ L + A +L L+AH R GG L DVEGH G DG LY+ID AR FPPE P
Sbjct: 7 AIATACRRTLCRKYQ--ALTALNKDFISAAVTYGRTIISEYFLKEEAKSVCPSLVGGIAGGRKFLLRGILFKLADGSRGPYDGSDEAAGKALNNDLKGAVHLVKCSIPGLFCSLQALIDYKGFRMHAQAQLPLCSRATLRCGSCDAGATVVDGDGALRHKLRLVAAQLNLKAH-----------------------RGRGGAELQLGCDVEGHRGTDGNLYVIDAARVFPPESP 215
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: A0A7R9UF47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF47_9STRA) HSP 1 Score: 164 bits (416), Expect = 9.070e-41 Identity = 109/291 (37.46%), Postives = 155/291 (53.26%), Query Frame = 2
Query: 461 NWNERWQGALSLANKTDMEKRYRKSSLNAVYADFVHTARTYGRTIISEYFLHEYMKSVRAKKLGGVAGGEKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLETGVG-LSVPPMCLLDYKGFRMLAQAELPI-------DLKTQKMGTSDGGKTVLNES----------------------PILNKRTAKAA---------KKLGLRAHKAGGEIKKEMYVDDLTGRRKQTKRNMGGKMLYAAADVEGHEGKDGRLYLIDLARAFPPEDPSATPHLSGMLSV 1216
+WNER+Q L L + +D E+R+R + L A YADFV TA TYG +ISE FL+E +K++ + + G+AGGEKY +RGI FKLA G + PYGG AA+KA GHEL+GA+ Y V L++P L+DY+G+R+LAQ +LPI + T K+G++ + V + P+L + + A +++ A E+ + RK K + AA DVEGHEG DG Y++D ARAFPPE P+ + SV
Sbjct: 29 DWNERYQAGLRLPDGSDEEQRFRLAHLTATYADFVATATTYGMVLISELFLNEELKTMSFESVPGLAGGEKYQYRGIFFKLATGHE-PYGGDYNAASKAMGHELKGATHYSRCNVTELNIPMHVLIDYRGYRLLAQTKLPIKPGKSLENPGTLKVGSAKACEVVFSVEQEEEPTAPPIAATKPGRYPQPYPLLPREPLRRAGSALLMPANERIFALMEAASNELNIAPHQVFCQTTRKPVK-------VPAAFDVEGHEGMDGLFYVVDFARAFPPEAPNLAEQMHESASV 311
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: A0A2P6NJP1_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NJP1_9EUKA) HSP 1 Score: 176 bits (445), Expect = 5.120e-40 Identity = 106/242 (43.80%), Postives = 144/242 (59.50%), Query Frame = 2
Query: 461 NWNERWQGALSLANKTD--MEKRYRKSSLNAVYADFVHTARTYGRTIISEYFLHEYMKSVRAKKLGGVAGGEKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLETGVG-LSVPPMCLLDYKGFRMLAQAELPIDLKTQKMGTSDGGKTVLNESPILNKRTAKAAKKLGLRAHKAGGEIKKEMYVDDLTGRRKQTKRNMGGKMLYAAADVEGHEGKDGRLYLIDLARAFPPED 1177
+WN+++Q L N D E+ S L+ + DFVH A+TYG+ IISE +L + K+++ +GG AGG KY+ +GILFKLA S G YG SD AAAK AG++L+G +Y G+ L P M L+DY GFR+ A + LPI+ T GT++GG+TV +++ N + A KKLGL H G +Y K LY+ AD+EGH+GKDGR YLID AR+FPP D
Sbjct: 701 SWNQQFQQILENLNLCDDAQERSTIYSQLSNLAQDFVHYAKTYGKLIISELYLPDDQKTIKPNDIGGFAGGVKYVVKGILFKLAVDSHGLYG-SDMAAAKVAGNDLKGLVQYFNLGISRLHFPLMALVDYMGFRIQALSLLPINSDTIIYGTANGGRTVFDKNLKFNAKMRLAGKKLGLSPHTVG------LYPKT-------------SKTLYSCADMEGHDGKDGRFYLIDFARSFPPID 922
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: L8HEQ4_ACACA (Leucine rich repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HEQ4_ACACA) HSP 1 Score: 172 bits (437), Expect = 5.190e-39 Identity = 118/321 (36.76%), Postives = 166/321 (51.71%), Query Frame = 2
Query: 461 NWNERWQGALSLANKTDMEKRYRKSSLNAVYADFVHTARTYGRTIISEYFLHEYMKSVR-AKKLGGVAGGEKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLETGVGLSVPPMCLLDYKGFRMLAQAELPIDLKTQKMGTSDGGKTVLNESPILNKRTAKAAKKLGLRAHKAGGEIKKEMYVDDLTGRRKQTKRNMGGKMLYAAADVEGHEGKDGRLYLIDLARAFPPEDPSATPHLSGMLSVSAKVVVKQDNPTGESATVTKAHGTLLDYDILYPDGREERGIPVDLLRDLRLFVFYRLLRPEFVRDRGR 1420
NWNE++Q L A T + + L+A+ DFVH ++TYG+ I+ E FL K+++ A LGG AGGEKY++ GI+FK A +G Y G D+ AAK+AGHEL+ + GL +P M L+DY+GFR++A + LPI+ T G++D G+ V + NK A A +KL L+ H AG +E Y + +Y AD+EGH GKDGR Y+IDLAR PP T ++ +V++ N +G KA D + +PV L YRL RPEF+ GR
Sbjct: 174 NWNEKFQAILDKAENTAEARLCKYRELSALAHDFVHASKTYGKIIVQESFLPRAYKTIKPADHLGGQAGGEKYIYHGIIFKFATDWKGLYRG-DQYAAKSAGHELKSLMRFYGLVPGLRIPLMSLIDYRGFRLVAMSILPIENDTLVYGSNDYGQHVWAMNERFNKIMAVAGRKLKLKGHVAG--FPEEAYKQEF---------------IYGPADIEGHIGKDGRNYVIDLARVCPPVAKHVTYTVTDR--EYTEVMMAGVNTSGSCKKAKKARRK---------DFKPPPPLPVHL---------YRLFRPEFLASYGR 456
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: F4Q305_CAVFA (Clu domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q305_CAVFA) HSP 1 Score: 169 bits (427), Expect = 5.290e-38 Identity = 103/243 (42.39%), Postives = 142/243 (58.44%), Query Frame = 2
Query: 461 NWNERWQGALSLANKTDMEKRYRKSSLNAVYADFVHTARTYGRTIISEYFLHEYMKSVRAKKLGGVAGGEKYLWRGILFKLADGSQGPYG--GSDEAAAKAAGHELRGASEYLETGV-GLSVPPMCLLDYKGFRMLAQAELPIDLKTQKMGTSDGGKTVLNESPILNKRTAKAAKKLGLRAHKAGGEIKKEMYVDDLTGRRKQTKRNMGGKMLYAAADVEGHEGKDGRLYLIDLARAFPPEDP 1180
+WN ++Q L D +++ K L+++ +DFV+ A +YGR IISE+ L +K+++ +GG+AGGEKY+ +GILFK A S YG GSDE AAK A HEL G + +L G+ GL VP M +DY+GFR++A + LPI KT G+SD G+TV + + N AAK L L+ H V+D TG +T +Y D+EGH G DGR YL+D AR PPE P
Sbjct: 399 SWNSQFQ---RLQEMDDCLEKFEK--LSSLESDFVYAAESYGRIIISEHLLSNELKTIKPVSVGGIAGGEKYIVQGILFKFAVESD-TYGLYGSDENAAKTAAHELNGCTAFLNCGIKGLHVPLMAYIDYRGFRLMAMSLLPITKKTLVYGSSDAGQTVHTSNTMFNHLFTSAAKVLNLKPH----------VVEDSTGGELRT--------IYGPIDIEGHVGTDGRFYLLDYARLAPPEPP 617
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Match: A0A6H5KFE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFE7_9PHAE) HSP 1 Score: 162 bits (411), Expect = 2.670e-37 Identity = 88/171 (51.46%), Postives = 111/171 (64.91%), Query Frame = 2
Query: 671 KYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGASEYLETGV-GLSVPPMCLLDYKGFRMLAQAELPIDLKTQKMGTSDGGKTVLNESPILNKRTAKAAKKLGLRAHKAGGEIKKEMYVDDLTGRRKQTKRNMGGKMLYAAADVEGHEGKDGRLYLIDLARAFPPEDP 1180
K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA+ YL T + GL CL+DYKGFRM AQA LP++ ++ + G+ DGGKTV N+ L K+ AAKKL L H+ V+D K +Y+A D+EGH G+DG YL+D AR FPPE P
Sbjct: 2 KFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGATHYLATRIRGLRYALQCLIDYKGFRMTAQAVLPVNKESLRYGSDDGGKTVHNDDESLAKKLKAAAKKLNLCTHR----------VND--------------KDMYSACDIEGHVGEDGSHYLLDFARTFPPESP 148 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9.46.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9.46.1 >prot_A-nodosum_M_contig9.46.1 ID=prot_A-nodosum_M_contig9.46.1|Name=mRNA_A-nodosum_M_contig9.46.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1369bp MRSSLIHDPSFALKRDTVDKMKHPDFTVGDDISKEERAAIALQRAWKERLback to top mRNA from alignment at A-nodosum_M_contig9:878482..902209+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9.46.1 ID=mRNA_A-nodosum_M_contig9.46.1|Name=mRNA_A-nodosum_M_contig9.46.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=23728bp|location=Sequence derived from alignment at A-nodosum_M_contig9:878482..902209+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9:878482..902209+ >mRNA_A-nodosum_M_contig9.46.1 ID=mRNA_A-nodosum_M_contig9.46.1|Name=mRNA_A-nodosum_M_contig9.46.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=4107bp|location=Sequence derived from alignment at A-nodosum_M_contig9:878482..902209+ (Ascophyllum nodosum dioecious)back to top |