mRNA_A-nodosum_M_contig8984.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig8984.1.1
Unique NamemRNA_A-nodosum_M_contig8984.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: A0A6A4Z1S9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z1S9_9STRA)

HSP 1 Score: 287 bits (734), Expect = 5.410e-90
Identity = 173/407 (42.51%), Postives = 235/407 (57.74%), Query Frame = 1
Query:    1 TRNNLTEKQRHRLVEHLLNGSQKGN-SQGDLKKAAADFSCSYEQVTGVWKRYKQ-QIQNGE-DVNLRNGRFGHSGRRGV-DVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWVREGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVEVTKAVHKQKMLDEVFPAIKRTWPGGPS-PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAERRG 1206
            T ++L + QR  L   LL     G  ++G   +    +  S + ++ +WKR +Q ++Q+G  DV LR  + G SGRR    +++ + A+K++P   R T  +LA+  G+  TTL R L    L+  +  LKP +TD  K  R+E+ + +VR    G    D+MHN V +DEKWFY+    +RYYL   E +PV K   K HI KVMFL  V RPR+D      +DGKIG++PF   VPA+R S+NR  GT  T  V VTK V++  +L  V P IK  WPG  S P+ +QQDNA  H   DDP +  AG ADGW+I L+ QPP SPD N+LDL FFNSIQ+LQ R  +  +D+L+  V R F   E   L + + T Q V+ E +   GDN FKLPH  K   ER G
Sbjct:    6 TNSDLPDDQRWSLYHDLLESKHSGRLARGVAAELLKKYGISRQTLSKIWKRGQQTRVQSGRADVGLR--KKGRSGRRPKRTLDEVESAVKSVPPHLRKTFASLAASSGIPPTTLWRVLQTKKLQRRTSRLKPMVTDKHKADRVEFVRSFVRPTSDGQMRWDDMHNRVHIDEKWFYLTLVNRRYYLWHDEAVPVRKCTSKRHIIKVMFLTAVARPRFDYTTRTMWDGKIGMWPFVSVVPARRKSKNRDRGTPVTTPVTVTKPVYRDYLLTHVIPRIKAVWPGRRSDPIYIQQDNARPHVEVDDPAVTMAGCADGWSIHLVAQPPMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFGDLEWRVLDKTFVTLQRVMGEALKMGGDNAFKLPHSQKDKTERLG 410          
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 286 bits (732), Expect = 1.680e-89
Identity = 166/406 (40.89%), Postives = 243/406 (59.85%), Query Frame = 1
Query:    1 TRNNLTEKQRHRLVEHLLNGSQKGNSQ-GDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWV-REGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVHKQKMLDEVFPAIKRTWPGGP-SPVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAERRG 1206
            T+ N T +QRH + E LL  S  G  Q G +   A+ FS S   V+ +W + K QI +G  V L +      GR+ V V+     +  IP++ R+ +R+LA+ L ++++T++R + +  LR  +  +KP LT   K  RLE+    + R       +  +M NV+ +DEKWFYM K  +RYYL  GE+ P+   + K  I KVMFLA V RPR+D   N  F GKIGI+PFTR  PA+RSS+NR AGT+ETK ++ VTK V +  ++++V P I+  WP     P+ +QQDNA  H   +D + + A + DG++IRL  QP NSPD N+LDL FF +IQSLQ++  L T+DEL+  V+  F   +S  L  V+ T Q  ++EI+  +G N +++PH+ K   ER G
Sbjct:    9 TKKNTTVEQRHAIYEALLQASFSGELQRGAISDVASQFSVSNRTVSRIWHQAKFQINHGLPVVLSSNMAKVVGRKRVQVDF--NQVLDIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREG 412          
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: UPI000CD9BE6A (uncharacterized protein LOC111905831 n=2 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9BE6A)

HSP 1 Score: 284 bits (726), Expect = 6.360e-89
Identity = 158/390 (40.51%), Postives = 239/390 (61.28%), Query Frame = 1
Query:   37 LVEHLLNGSQKGNSQGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWV-REGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVHKQKMLDEVFPAIKRTWPGGPS-PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAE 1197
            L++H  NG  +   +G +   AA F  S   V+ +W R K Q++NG  ++  + +    GR+ V ++     +  IP++ RTT++++A  LG+ ++TL+R + +  LR  +  +KP LTDA K +RLE+    + R       +  +M NV+ +DEKWFY+ +  +RYYL  GE+ P+   K K  I KVMFLA V R R+D + N  F GKIGIFP T + PA+RSS+NR AGT+ETK ++ VTK + +  ++++V PAIK  WP   + P+ +QQDNA  H   +D + + A + DG++IRL  QPPNSPD N+LDL FF +IQSLQ++  L TVDEL+  V+  F   +S  L  V+ T Q  ++EI+  KG N +++ H+ K   E
Sbjct:   25 LLQHNSNGELR---RGSINDVAALFGVSKRTVSRIWNRAKLQVENGSIIDFSSKKLKVVGRKRVQLDL--NQVSQIPLRRRTTIQSIAKSLGIVKSTLHRRIKEGDLRPRTNAIKPDLTDANKTKRLEFCLSMITRSLPESNTTFHDMFNVIHIDEKWFYISRSSKRYYLVPGEDEPLRTCKSKKFITKVMFLAAVARLRFDALGNEIFFGKIGIFPLTTKEPAKRSSKNRVAGTLETKPILSVTKEITRSWLIEKVLPAIKAKWPPNHTGPIFIQQDNAKPHIDVNDNEFLEASSQDGFDIRLCFQPPNSPDLNMLDLGFFRAIQSLQEQEVLHTVDELVTAVQTSFDKMQSHELNNVFLTLQTCMKEIIKVKGGNNYRISHIGKSRLE 409          
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: UPI000B8F2756 (uncharacterized protein LOC110913170 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F2756)

HSP 1 Score: 283 bits (725), Expect = 1.730e-88
Identity = 165/406 (40.64%), Postives = 241/406 (59.36%), Query Frame = 1
Query:    1 TRNNLTEKQRHRLVEHLLNGSQKGNSQ-GDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNL-RNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWVREGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVHKQKMLDEVFPAIKRTWPGGPS-PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAERRG 1206
            T+  LT  +R  + E +L  S  G  + G +   A+ FS S   V+ +W + + Q+Q+G  V++ R        R  ++ ++  +    I ++ RT +R++A  L ++++T++R + +  LR  +  +KP LT+  K+ RLE+    +          D M NVV +DEKWFYM K  + YYL  GE+ P+ K K K  I KVMFLA V RPR+DT+ N  F GKIGIFPFT+  PA+RSS+NR AGTMETK ++ VTK V +  ++D+V PAI+  WP G + P+ +QQDNA  H   DD   V   +  G++IRL  QPPNSPD N+LDL FF +IQSLQ++  L ++DEL+  V+  F    S  L  V+ T Q  ++EIM   G N ++ PH+ K   ER+G
Sbjct:    9 TKPRLTNSERRTIYEVILEQSNDGKLKYGSISDVASHFSVSTRTVSRIWHQARFQVQHGYLVDVSRKPHIAKQKRIQINFDQVAQ----IALRRRTNIRSIAKALNVSKSTVHRRIKEGELRPHTNAIKPNLTEENKKERLEFCLSMITPSLSNPSFYD-MFNVVHIDEKWFYMSKPSKSYYLVPGEDEPLRKCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKIGIFPFTKLEPAKRSSKNRVAGTMETKPILSVTKEVTRSWLIDKVLPAIRDKWPQGHTGPIFIQQDNAKPHISIDDEQFVQEASRGGFDIRLRFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVHAVQTSFHKMSSRELNNVFLTLQTCMKEIMKVHGSNNYQTPHISKGRLERQG 409          
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3)

HSP 1 Score: 279 bits (714), Expect = 8.630e-87
Identity = 160/407 (39.31%), Postives = 243/407 (59.71%), Query Frame = 1
Query:    1 TRNNLTEKQRHRLVEHLLNGSQKGN-SQGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEW--AKRWVREGHGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK-MVEVTKAVHKQKMLDEVFPAIKRTWPGGPS-PVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAERRG 1206
            T+ N T  QR  + + LL  S  G   +G + + A+ FS S   V+ +W + K Q+ +G  V+  +      G++ V +      +  IP+++R+ +R+LA  L ++++TL+R + +  LR  +  +KP LT   +  RLE+  +K  +        +  +M NVV +DEKWFYM K  +RYYL  G++ P+   K K  I K+MFLA V RPR+D+  N  F GKIGI+PFT   PA+RSS+NR AGTMETK ++ V K V +  ++++V P I+  WP G + P+ +QQDNA  H   DD + + A + DG++IRL  QPPNSPD N+LDL FF +IQSLQ++  L T DEL+  V+  F   +S  L  V+ T Q  ++EI+  +G N + +PH+ K   +R+G
Sbjct:    9 TKKNTTIAQRQAIFQSLLQESFDGRLKKGSVSEVASLFSVSKRTVSRIWHQGKNQVDHGLPVDFSSNMPMVVGQKRVQINL--NQVSEIPLRHRSNIRSLAKSLNVSKSTLHRRIKEGVLRPHTNVIKPTLTHENRRARLEYCLSKITLSSLFSPIPTFHDMFNVVHIDEKWFYMSKPSKRYYLVPGDDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGPIFIQQDNAKPHIDVDDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALSTTDELVNAVQTSFERMQSQQLNNVFLTLQTCMKEIIKVQGGNNYHIPHIGKSRLDRQG 413          
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: A0A1R3KIH7_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KIH7_9ROSI)

HSP 1 Score: 276 bits (706), Expect = 1.440e-85
Identity = 163/402 (40.55%), Postives = 238/402 (59.20%), Query Frame = 1
Query:   10 NLTEKQRHRLVEHLLNGSQKGN-SQGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWVREGHGGARSI--DNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVEVTKAVHKQKMLDEVFPAIKRTWPGGPSPVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAERRG 1206
            NLT +QR  + E LL  S+ G  S+G L   A  FS S + +  +WK+ K  ++NG  VN+ +   G+ GR+ + ++  K +  +   KN+ ++ +   E    ++T++R + +  +RA S  +KP LTD  K+ RLE+    +   + G  +I  D M N V +DEKWF+M ++ +RYYL   E+ PV   K K  I KVMFLA V RPR+D   N  F GKIGIFPF  + PA+R S+NR AGTMETK + VTK V +  M++++ PAIK  WP     V +QQDNA  H    D + + A ++DG++I++  QPPNSPD N+LDL FF +IQSLQ +   RT+DELI  V + F      +L  V+ T Q  + E+M   G N +K+PH+ K   + +G
Sbjct:   17 NLTNQQRQTIYEMLLKQSKDGVLSKGSLTSLATMFSVSPKTIGRIWKQAKLCMENGLVVNVSSKLTGNVGRKKILIDPRKVSENSSSAKNQYSVNSKGFEY--VKSTIHRRVKEGFIRAHSNAVKPDLTDENKKTRLEFCLSKLDLTNAGINTIPFDGMFNQVHIDEKWFFMTRESERYYLLPEEDEPVRTCKSKRFITKVMFLAAVARPRFDESGNVKFSGKIGIFPFVHKEPAKRKSKNRIAGTMETKPMLVTKDVTRAYMIEKILPAIKSKWPDKMETVYIQQDNAKPHINPKDVEFLKAASSDGFDIQISCQPPNSPDLNVLDLGFFRAIQSLQHQEAPRTIDELINAVEKSFNEFPENSLNNVFLTLQNCMIEVMKVGGGNNYKVPHMGKDKLQNQG 416          
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: UPI0007EF4F0C (uncharacterized protein LOC108212769 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF4F0C)

HSP 1 Score: 275 bits (703), Expect = 4.170e-85
Identity = 155/369 (42.01%), Postives = 223/369 (60.43%), Query Frame = 1
Query:   82 GDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWVREGHGGARSI-DNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVE-VTKAVHKQKMLDEVFPAIKRTWPGGPSP--VSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPH 1176
            G  K AA  FS S   +T +W   KQ I NG D + ++  FGH+GR+ V+++     +K +P   RT +R+LA  + ++++TL+R + +  LR  +  +KPYLT+  K  RL +    +        S+  +M N + +DEKWF M K+ QRYY+   E  P+   K  + I K+MFL VV RPR+DT+ N  F+GKIGIFPF  + PA+R S+NR AGT+ETK +  +TK V ++ M+D+V PAI+  WPGG S   + VQQDNA  H   DDP+ V A   +G++IRL  QPPNSPD N+LDL FF +IQ+LQ     +++DEL+  V + F       L +++ T Q  + EIM   G N +K PH
Sbjct:   41 GFKKIAATKFSISARTITRIWLLGKQNIANGIDFSGKS--FGHAGRKRVEIDV--NMVKEVPFNRRTNIRSLACAIHLSKSTLHRRIREGHLRPHTNSIKPYLTEENKRARLRFCLSMITHDMNLNISLFSSMLNSIHIDEKWFTMTKKNQRYYILPDENPPLRTCKSSNFIDKIMFLCVVARPRFDTLRNTMFEGKIGIFPFITKEPAKRKSKNRPAGTLETKPINPITKDVTRKMMIDKVLPAIESMWPGGNSGGIIFVQQDNAKPHISVDDPEFVEAAKRNGFDIRLCFQPPNSPDLNVLDLGFFRAIQTLQHEQAPKSIDELVAAVEKSFVELHHDKLNKIFLTLQLNMIEIMKKAGGNNYKQPH 405          
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08)

HSP 1 Score: 275 bits (704), Expect = 4.540e-85
Identity = 160/404 (39.60%), Postives = 237/404 (58.66%), Query Frame = 1
Query:   13 LTEKQRHRLVEHLLNGSQKGN-SQGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFG--HSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWVREG-HGGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVE-VTKAVHKQKMLDEVFPAIKRTWPGGPSP-VSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAERRG 1206
            LT   ++ +V+ LL  S  G   +G + +AA +FS S + V  +WK  K Q+Q GE   +     G  H+ +  +D +K    ++ + +  R+++R +A  L +++TT++  + +  LR  +  +KP LT+  K  RL+W    ++     G      MHN+V +DEKWFYM K   RYYL   E+ P    K K +I KVMF+  V RP++D+    ++DGK+GIFPFT  VPAQR S+NR  GT+ETK +  + K V +  ++ ++ PAIK  WP   S  + +QQDNA  H    DP+  A   +DG+ I LI QPPNSPDTNILDL FF +IQSLQ +   R VDEL+E V + +       L RV+ + QA L +I+  +GDN++K+PH++K   ER G
Sbjct:   12 LTSNMKNLVVQFLLKHSHLGVLRRGTVMEAAGEFSISRKTVYRLWKVAKDQMQQGEPAIMEGKLKGYQHADKLNLDEDK----VRNLSILQRSSIRTMACNLSVSKTTIHNWIKQDKLRPHTNAIKPALTELNKLARLKWCLTQLQPSITQGKVHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWASKEIYIQQDNATPHITATDPEFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTG 411          
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: UPI001C256EBA (uncharacterized protein LOC121779336 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C256EBA)

HSP 1 Score: 275 bits (703), Expect = 6.060e-85
Identity = 159/404 (39.36%), Postives = 242/404 (59.90%), Query Frame = 1
Query:   13 LTEKQRHRLVEHLLNGSQKGN-SQGDLKKAAADFSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWVREGHGGARSI--DNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVE-VTKAVHKQKMLDEVFPAIKRTWPGGPSP-VSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAERRGV 1209
            LT   ++ +V+HLL  SQ G   +G + +AA  F+ + + ++ +WK   + ++NGE  ++     G+       V++ K  ++++ +  R++ R +A +LG+++TT+ R +    LR  +  +KP+LTD  K  RL+W    ++     AR++  + M NVV +DEKWFY+ K   RYYL   EE P    + K  I KVMFL  VGRP +       FDGK+GIFPFT  VPAQR+S+NR  GT+ETK +  VT+AV ++ +++++ PAI   WP   S  + +QQDNA  H    DP+   A  ++G+ I+LI QPPNSPDTNILDL FF +IQSL+D+     VDEL++ V   +       L +V+ T Q+VL EI+  +G N +K+PH++K   ER G 
Sbjct:   10 LTTNMKNNIVQHLLKNSQGGVLRKGAVCEAAEAFAVNRKTISRLWKAATEMMENGEPAHMVGKVKGYKRGEKKKVDEVK--VRSLSVLERSSYRVMAPKLGVSKTTICRWVKDKQLRPHTSAIKPHLTDLNKLARLKWCLSQLQPNII-ARTVAFNEMRNVVHIDEKWFYLTKSADRYYLLPDEEEPQRSCRSKRFITKVMFLCAVGRPHFGPNGETLFDGKLGIFPFTEMVPAQRNSKNRPRGTLETKPIPAVTQAVTREWLINKIIPAIHSKWPTSASKEIYIQQDNAKPHISTTDPEFEEAANSNGFKIQLICQPPNSPDTNILDLGFFRAIQSLKDKKACSNVDELLQNVSMAYEELTPQTLNKVFLTLQSVLSEILEVQGGNNYKIPHMNKDRLERIGA 410          
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Match: Q7G793_ORYSJ (Transposon protein, putative, Mariner sub-class n=4 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7G793_ORYSJ)

HSP 1 Score: 276 bits (705), Expect = 6.490e-84
Identity = 164/408 (40.20%), Postives = 239/408 (58.58%), Query Frame = 1
Query:   13 LTEKQRHRLVEHLLNGSQKGNSQGDLKKAAAD-FSCSYEQVTGVWKRYKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALASELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWVREGHGGARSIDN------MHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQKVMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETKMVEVTKAVHKQKMLDEVFPAIKRTWP--GGPSPVSVQQDNAPAHKINDDPDIVAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELIEEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAERRGV 1209
            LT  QR R+ E LL  S+ G  + D  +A A  F+ S   V  +WKR K  I +G  VN+ + +  + GR+ V ++ +   +  IP++ R+T+R+LA  LG++++TL+R   +  LR  S  LKPYL +A K+ RL+W       G    R++ N      M N+V +DEKWF   K+ + +YL   EE P   V++K+ I+KVMFL+ V RPR+D   N +FDGKIGI+PF R+ PAQR SRNR  GT+ TK ++V +   +  ++ +V PAI+  WP       + +QQDNA  H   DD     A    G +IRL+NQPPNSPD N LDL FF S+QSL      + ++ELIE V++ +   +   L RV+ T Q+   E+M A G N +K+PH++K   E  G+
Sbjct:  144 LTNTQRQRIYELLLAKSKDGKLEKDTTRAVAQVFNVSIRTVQRIWKRAKLCIAHGVQVNVDSRKCYNCGRKKVVIDLS--VVSAIPLRQRSTIRSLAEALGVSKSTLHRLFKEGHLRRHSNSLKPYLKEANKKERLQWCV-----GMLDHRTLPNDPKFIEMENIVHIDEKWFNATKKDRTFYLHPLEEEPYRPVQNKNAIEKVMFLSTVARPRYDAEGNCTFDGKIGIWPFVRKEPAQRRSRNRERGTLVTKTIKVDRDTMRSFIISKVLPAIRACWPLEDARRTIFIQQDNARTHVPIDDEQFSVAVAQMGLDIRLVNQPPNSPDMNCLDLGFFASLQSLTANRVSKNMEELIENVQKEYNDYDPKTLNRVFVTLQSCCIEVMEANGGNKYKIPHMNKARLEALGI 544          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8984.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4Z1S9_9STRA5.410e-9042.51Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
UPI000CD873B31.680e-8940.89uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
UPI000CD9BE6A6.360e-8940.51uncharacterized protein LOC111905831 n=2 Tax=Lactu... [more]
UPI000B8F27561.730e-8840.64uncharacterized protein LOC110913170 n=1 Tax=Helia... [more]
UPI000CD9DCB38.630e-8739.31uncharacterized protein LOC111916103 n=1 Tax=Lactu... [more]
A0A1R3KIH7_9ROSI1.440e-8540.55Transposase, Tc1-like protein n=1 Tax=Corchorus ol... [more]
UPI0007EF4F0C4.170e-8542.01uncharacterized protein LOC108212769 n=1 Tax=Daucu... [more]
UPI0020091A084.540e-8539.60uncharacterized protein LOC125206097 n=1 Tax=Salvi... [more]
UPI001C256EBA6.060e-8539.36uncharacterized protein LOC121779336 n=3 Tax=Salvi... [more]
Q7G793_ORYSJ6.490e-8440.20Transposon protein, putative, Mariner sub-class n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8984contigA-nodosum_M_contig8984:2629..3846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog161934.XP_010672225.1
PFAMsHTH_Tnp_Tc3_2
Model size1218
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.22e-81
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota,37TMG@33090|Viridiplantae,3GG9M@35493|Streptophyta
Cds size1218
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870330.836444-CDS-A-nodosum_M_contig8984:2628..38461680870330.836444-CDS-A-nodosum_M_contig8984:2628..3846Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8984 2629..3846 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8984.1.1prot_A-nodosum_M_contig8984.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig8984 2629..3846 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig8984.1.1

>prot_A-nodosum_M_contig8984.1.1 ID=prot_A-nodosum_M_contig8984.1.1|Name=mRNA_A-nodosum_M_contig8984.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=406bp
TRNNLTEKQRHRLVEHLLNGSQKGNSQGDLKKAAADFSCSYEQVTGVWKR
YKQQIQNGEDVNLRNGRFGHSGRRGVDVEKAKEALKTIPMKNRTTMRALA
SELGMTRTTLNRNLPKLGLRAASRFLKPYLTDAGKERRLEWAKRWVREGH
GGARSIDNMHNVVMVDEKWFYMFKQGQRYYLGAGEELPVHKVKHKSHIQK
VMFLAVVGRPRWDTVANRSFDGKIGIFPFTRRVPAQRSSRNRAAGTMETK
MVEVTKAVHKQKMLDEVFPAIKRTWPGGPSPVSVQQDNAPAHKINDDPDI
VAAGTADGWNIRLINQPPNSPDTNILDLFFFNSIQSLQDRTTLRTVDELI
EEVRRVFAAQESAALGRVWTTYQAVLQEIMLAKGDNTFKLPHLHKQTAER
RGVAIL
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mRNA from alignment at A-nodosum_M_contig8984:2629..3846+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig8984.1.1 ID=mRNA_A-nodosum_M_contig8984.1.1|Name=mRNA_A-nodosum_M_contig8984.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1218bp|location=Sequence derived from alignment at A-nodosum_M_contig8984:2629..3846+ (Ascophyllum nodosum dioecious)
ACTCGAAACAATCTAACCGAAAAACAGAGGCACCGACTAGTCGAGCATCT GCTGAATGGCAGCCAAAAAGGAAACTCGCAAGGTGACCTGAAGAAAGCTG CTGCAGACTTCTCCTGCTCTTACGAGCAAGTGACGGGTGTGTGGAAGAGA TACAAGCAGCAAATACAAAACGGCGAAGATGTCAACCTGCGCAACGGACG CTTCGGGCACTCCGGCAGACGAGGGGTTGATGTCGAAAAGGCCAAAGAGG CCCTCAAGACCATCCCGATGAAGAATCGGACGACAATGAGAGCCCTTGCG TCGGAGCTGGGCATGACCAGAACAACACTGAACCGCAATCTCCCCAAACT TGGCTTGCGCGCGGCGTCTCGATTCCTGAAGCCGTACCTCACCGACGCCG GCAAAGAACGGAGGCTGGAGTGGGCCAAGCGTTGGGTGAGGGAAGGCCAC GGTGGTGCCCGTTCTATCGACAACATGCACAACGTCGTCATGGTGGACGA GAAGTGGTTTTACATGTTCAAGCAGGGCCAGAGGTATTACCTGGGGGCGG GTGAAGAACTACCCGTGCACAAGGTCAAGCACAAATCACACATCCAGAAG GTCATGTTTCTGGCAGTCGTCGGGCGGCCGCGTTGGGACACCGTCGCCAA CCGCAGCTTCGACGGGAAAATCGGCATCTTCCCGTTCACGAGGCGGGTGC CTGCCCAACGCAGCAGCAGGAACAGGGCTGCCGGCACCATGGAGACGAAG ATGGTCGAGGTGACGAAAGCGGTCCACAAGCAGAAGATGCTGGACGAGGT GTTTCCCGCCATCAAGCGCACGTGGCCGGGTGGCCCATCGCCCGTCAGCG TGCAACAGGACAACGCGCCGGCCCACAAGATCAACGACGACCCGGACATC GTGGCGGCGGGCACCGCTGACGGCTGGAACATCAGGCTCATCAACCAGCC ACCCAACAGCCCTGACACCAACATCCTCGACCTGTTTTTTTTTAACTCCA TCCAGTCCCTGCAGGACCGCACGACGCTGCGCACGGTGGACGAGCTCATC GAGGAGGTCCGGAGGGTGTTTGCCGCACAGGAATCGGCTGCCCTTGGAAG GGTCTGGACGACCTACCAGGCCGTTCTTCAGGAGATCATGCTGGCTAAGG GCGACAACACGTTCAAGCTCCCTCATCTGCACAAGCAGACTGCTGAGCGT CGTGGTGTGGCGATCCTC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig8984:2629..3846+

>mRNA_A-nodosum_M_contig8984.1.1 ID=mRNA_A-nodosum_M_contig8984.1.1|Name=mRNA_A-nodosum_M_contig8984.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at A-nodosum_M_contig8984:2629..3846+ (Ascophyllum nodosum dioecious)
ACTCGAAACAATCTAACCGAAAAACAGAGGCACCGACTAGTCGAGCATCT
GCTGAATGGCAGCCAAAAAGGAAACTCGCAAGGTGACCTGAAGAAAGCTG
CTGCAGACTTCTCCTGCTCTTACGAGCAAGTGACGGGTGTGTGGAAGAGA
TACAAGCAGCAAATACAAAACGGCGAAGATGTCAACCTGCGCAACGGACG
CTTCGGGCACTCCGGCAGACGAGGGGTTGATGTCGAAAAGGCCAAAGAGG
CCCTCAAGACCATCCCGATGAAGAATCGGACGACAATGAGAGCCCTTGCG
TCGGAGCTGGGCATGACCAGAACAACACTGAACCGCAATCTCCCCAAACT
TGGCTTGCGCGCGGCGTCTCGATTCCTGAAGCCGTACCTCACCGACGCCG
GCAAAGAACGGAGGCTGGAGTGGGCCAAGCGTTGGGTGAGGGAAGGCCAC
GGTGGTGCCCGTTCTATCGACAACATGCACAACGTCGTCATGGTGGACGA
GAAGTGGTTTTACATGTTCAAGCAGGGCCAGAGGTATTACCTGGGGGCGG
GTGAAGAACTACCCGTGCACAAGGTCAAGCACAAATCACACATCCAGAAG
GTCATGTTTCTGGCAGTCGTCGGGCGGCCGCGTTGGGACACCGTCGCCAA
CCGCAGCTTCGACGGGAAAATCGGCATCTTCCCGTTCACGAGGCGGGTGC
CTGCCCAACGCAGCAGCAGGAACAGGGCTGCCGGCACCATGGAGACGAAG
ATGGTCGAGGTGACGAAAGCGGTCCACAAGCAGAAGATGCTGGACGAGGT
GTTTCCCGCCATCAAGCGCACGTGGCCGGGTGGCCCATCGCCCGTCAGCG
TGCAACAGGACAACGCGCCGGCCCACAAGATCAACGACGACCCGGACATC
GTGGCGGCGGGCACCGCTGACGGCTGGAACATCAGGCTCATCAACCAGCC
ACCCAACAGCCCTGACACCAACATCCTCGACCTGTTTTTTTTTAACTCCA
TCCAGTCCCTGCAGGACCGCACGACGCTGCGCACGGTGGACGAGCTCATC
GAGGAGGTCCGGAGGGTGTTTGCCGCACAGGAATCGGCTGCCCTTGGAAG
GGTCTGGACGACCTACCAGGCCGTTCTTCAGGAGATCATGCTGGCTAAGG
GCGACAACACGTTCAAGCTCCCTCATCTGCACAAGCAGACTGCTGAGCGT
CGTGGTGTGGCGATCCTC
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