mRNA_A-nodosum_M_contig898.14.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig898.14.2
Unique NamemRNA_A-nodosum_M_contig898.14.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: D8LDH9_ECTSI (Centrin n=4 Tax=Eukaryota TaxID=2759 RepID=D8LDH9_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 6.490e-78
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 3 
Query:  600 ATTSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            A TSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY
Sbjct:    2 AATSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 164
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: A0A1V9ZCQ4_9STRA (Caltractin n=6 Tax=Stramenopiles TaxID=33634 RepID=A0A1V9ZCQ4_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.680e-72
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 3 
Query:  624 AKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            AK+KKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXX  EFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY
Sbjct:   16 AKNKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXFTEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 170
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: A0A024GNG8_9STRA (Uncharacterized protein n=21 Tax=Stramenopiles TaxID=33634 RepID=A0A024GNG8_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.420e-71
Identity = 150/162 (92.59%), Postives = 155/162 (95.68%), Query Frame = 3 
Query:  603 TTSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            T  K   AK+KKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXX  EFLEMMT+KMSEKDS+EEI+KAFRLFDDDETGKI+FRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY
Sbjct:   12 TKGKGNAAKTKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXFTEFLEMMTTKMSEKDSKEEIIKAFRLFDDDETGKITFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 173
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: A0A813A1S0_SYMMI (Calmodulin n=15 Tax=Sar TaxID=2698737 RepID=A0A813A1S0_SYMMI)

HSP 1 Score: 236 bits (603), Expect = 2.820e-71
Identity = 151/157 (96.18%), Postives = 155/157 (98.73%), Query Frame = 3 
Query:  618 GGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            GG KSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXX FLEMMT+KMSE+DSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEI+E+EFLRIMKKTSLY
Sbjct:    7 GGGKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXXFLEMMTAKMSERDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEISEDEFLRIMKKTSLY 163
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: A0A3R7A958_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A3R7A958_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.000e-70
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 3 
Query:  624 AKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            AK+KKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXX  EFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY
Sbjct:  164 AKNKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXFTEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 318
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: A0A0M0JBM6_9EUKA (Centrin n=4 Tax=Eukaryota TaxID=2759 RepID=A0A0M0JBM6_9EUKA)

HSP 1 Score: 231 bits (589), Expect = 3.370e-69
Identity = 151/161 (93.79%), Postives = 157/161 (97.52%), Query Frame = 3 
Query:  606 TSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            T+K+GG K+ K ELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP XXXXXXXXXXXXXXXXXXXXXXEFL+MMT+KMSEKDSREEILKAFRLFDDDETGKISF+NLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY
Sbjct:    5 TAKKGG-KTGKAELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPXXXXXXXXXXXXXXXXXXXXXXXEFLQMMTAKMSEKDSREEILKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 164
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: A0A7S3C3I2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C3I2_9EUKA)

HSP 1 Score: 230 bits (586), Expect = 1.440e-68
Identity = 149/158 (94.30%), Postives = 153/158 (96.84%), Query Frame = 3 
Query:  615 RGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            +G  K  K ELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFL+MMT+KMSEKDSREEILKAFRLFDDDETGKISF+NLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY
Sbjct:   20 KGRGKGGKPELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLQMMTAKMSEKDSREEILKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 177
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: A0A3R6VX05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VX05_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.720e-68
Identity = 162/196 (82.65%), Postives = 166/196 (84.69%), Query Frame = 3 
Query:  516 RRERGPGTNYFSCSADHEQDWHRCMVITATTSKRGGA-----KSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            R E  P  +Y +    H  D    M +   T K G A     K+KKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXX  EFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY
Sbjct:  427 RDEYRPFEDYTAYETSHAYD---SMPLGRKTGKAGAATGAAAKNKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXFTEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 619
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: A0A5A8D4X3_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D4X3_CAFRO)

HSP 1 Score: 226 bits (575), Expect = 4.140e-67
Identity = 143/160 (89.38%), Postives = 150/160 (93.75%), Query Frame = 3 
Query:  609 SKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            S RG  K  KFELTEEQ+QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK   XXXXXXXXXXXXXXXXXXX FL+MMT+KMSEKDSREEILKAFRLFDDDETGKISF+NLKRVAKELGE+MTD+EL EMI+EADRDGDGEINEEEFLRIMKKTSLY
Sbjct:    7 SARGARKGGKFELTEEQRQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKAEXXXXXXXXXXXXXXXXXXXXFLDMMTAKMSEKDSREEILKAFRLFDDDETGKISFKNLKRVAKELGESMTDDELAEMIEEADRDGDGEINEEEFLRIMKKTSLY 166
[Close]
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Match: A0A2P6MRZ1_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MRZ1_9EUKA)

HSP 1 Score: 225 bits (574), Expect = 7.080e-67
Identity = 147/169 (86.98%), Postives = 157/169 (92.90%), Query Frame = 3 
Query:  582 RCMVITATTSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 1088
            +   + A+ +K  G    K ELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFL++MT+KMSEKDSREEILKAFRLFDDDETGKISF+NLKRVAKELGEN+TDEE+QEMIDEADRDGDGEINEEEFLRIMKKTSLY
Sbjct:    6 KANAVPASRAK--GTTKGKPELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKXXXXXXXXXXXXXXXXXXXXXXEFLDLMTAKMSEKDSREEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEEIQEMIDEADRDGDGEINEEEFLRIMKKTSLY 172
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig898.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDH9_ECTSI6.490e-7899.39Centrin n=4 Tax=Eukaryota TaxID=2759 RepID=D8LDH9_... [more]
A0A1V9ZCQ4_9STRA1.680e-7298.06Caltractin n=6 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A024GNG8_9STRA1.420e-7192.59Uncharacterized protein n=21 Tax=Stramenopiles Tax... [more]
A0A813A1S0_SYMMI2.820e-7196.18Calmodulin n=15 Tax=Sar TaxID=2698737 RepID=A0A813... [more]
A0A3R7A958_9STRA2.000e-7098.06Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A0M0JBM6_9EUKA3.370e-6993.79Centrin n=4 Tax=Eukaryota TaxID=2759 RepID=A0A0M0J... [more]
A0A7S3C3I2_9EUKA1.440e-6894.30Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A3R6VX05_9STRA1.720e-6882.65Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A5A8D4X3_CAFRO4.140e-6789.38Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A2P6MRZ1_9EUKA7.080e-6786.98Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig898contigA-nodosum_M_contig898:32118..42224 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog112098.XP_008618385.1
Preferred nameCETN1
PFAMsEF-hand_1,EF-hand_5,EF-hand_6,EF-hand_7,EF-hand_8
Model size1913
Max annot lvl2759|Eukaryota
KEGG koko:K10840,ko:K16465
KEGG Pathwayko03420,map03420
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000086,GO:0000109,GO:0000226,GO:0000278,GO:0000715,GO:0000922,GO:0003674,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005929,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006294,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007099,GO:0007276,GO:0007283,GO:0007346,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010389,GO:0010564,GO:0015630,GO:0015631,GO:0016043,GO:0019953,GO:0022402,GO:0022406,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0031023,GO:0031683,GO:0031974,GO:0031981,GO:0032391,GO:0032465,GO:0032501,GO:0032504,GO:0032795,GO:0032991,GO:0033554,GO:0034605,GO:0034622,GO:0034641,GO:0035869,GO:0036064,GO:0042995,GO:0043005,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0044877,GO:0046483,GO:0046872,GO:0048232,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051276,GO:0051298,GO:0051302,GO:0051640,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0060271,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070911,GO:0070925,GO:0071704,GO:0071824,GO:0071840,GO:0071942,GO:0090304,GO:0097458,GO:0097711,GO:0097730,GO:0097731,GO:0097733,GO:0098534,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140056,GO:1901360,GO:1901987,GO:1901990,GO:1902749,GO:1903047,GO:1990391
Exons5
Evalue5.43e-79
EggNOG OGsCOG5126@1|root,KOG0028@2759|Eukaryota
Ec32 ortholog descriptioncentrin
Ec32 orthologEc-15_000530.1
Descriptioncalcium ion binding
Cds size666
COG categoryDTZ
BRITEko00000,ko00001,ko03036,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig898.14.2prot_A-nodosum_M_contig898.14.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig898 32940..41799 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870330.3382185-UTR-A-nodosum_M_contig898:32117..329391680870330.3382185-UTR-A-nodosum_M_contig898:32117..32939Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig898 32118..32939 -
1680870330.4145577-UTR-A-nodosum_M_contig898:41799..422241680870330.4145577-UTR-A-nodosum_M_contig898:41799..42224Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig898 41800..42224 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870330.3554046-CDS-A-nodosum_M_contig898:32939..330291680870330.3554046-CDS-A-nodosum_M_contig898:32939..33029Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig898 32940..33029 -
1680870330.3675604-CDS-A-nodosum_M_contig898:33419..335571680870330.3675604-CDS-A-nodosum_M_contig898:33419..33557Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig898 33420..33557 -
1680870330.3816185-CDS-A-nodosum_M_contig898:35088..352431680870330.3816185-CDS-A-nodosum_M_contig898:35088..35243Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig898 35089..35243 -
1680870330.3931477-CDS-A-nodosum_M_contig898:35654..357621680870330.3931477-CDS-A-nodosum_M_contig898:35654..35762Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig898 35655..35762 -
1680870330.4036555-CDS-A-nodosum_M_contig898:41624..417991680870330.4036555-CDS-A-nodosum_M_contig898:41624..41799Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig898 41625..41799 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig898.14.2

>prot_A-nodosum_M_contig898.14.2 ID=prot_A-nodosum_M_contig898.14.2|Name=mRNA_A-nodosum_M_contig898.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=222bp
MFDTDTPRVWRMSGLTRTGPAKPVSRGQILRRERGPGTNYFSCSADHEQD
WHRCMVITATTSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAK
ELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKD
SREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADR
DGDGEINEEEFLRIMKKTSLY*
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mRNA from alignment at A-nodosum_M_contig898:32118..42224-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig898.14.2 ID=mRNA_A-nodosum_M_contig898.14.2|Name=mRNA_A-nodosum_M_contig898.14.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10107bp|location=Sequence derived from alignment at A-nodosum_M_contig898:32118..42224- (Ascophyllum nodosum dioecious)
AGATATTCGAAATGGTGAGTCTAGTTTACGATTACCGAATACCTGCACTA
CTTGCACAAATGCGAGAACGACGTTGGAAACGTGAAACGGCAGATCGTTG
CACTTGACGTCGTTGTTTTGGGGATTGGACCGCGTGCTCATGGGGGAAGA
GGGAAAGTCGACAGTGTTTTGCAACCACGTTCCCCTTTATCCCTGAAATC
ATCAGTGCTGTTCGTATCGATCTTTGAAAGTCTTTCATCAGAACCCTTGT
TCATCTATCCATCGGAGGGATGGGCCGACCCAAGGCGAAGATTGGCGTGC
CCAGTTCATTAGCTGTTCTAAATAAAAAATGAATGACGATCTTTCCACTG
TCCATAATACACACCCTTGGCCACAACAGCGGCTGTCAGTAGTAGAGCAC
TATAGAGTATCGGAGTAACACTGACATGTTTGATACAGACACACCCAGAG
TGTGGAGAATGAGCGGACTGACGCGGACCGGGCCGGCCAAACCTGTCTCG
CGAGGCCAGATTCTCAGGCGCGAACGGGGACCGGGAACGAATTATTTTTC
TTGTTCAGCTGACCACGAGCAGGATTGGCATCGATGCATGGTCATCACGG
ATCAACCGGGTAAAGTTGCCAATCCTCTCGATAGCAAGGGTCAGGATCAA
CCGGGTAAGGTTGCCAATCCTTCTCGTGGTCAGCTGAACAGGGAGAACGA
AATTATACCCGGTTGATCCATCCTCTGCTGAAAGTGCTGACTATACAGTA
AGTAGGCAACTTGTATACCTGGTATGTACCAGGTACGCAGGTACACCCTT
GTCCCTCTTTGTTTGTACATCACCAGTTACCAGTTAGGTCCCCTCTATTT
GTACCACTGTATATTGTATTCCACGATCGGATCCGCCCCCGTTTTTCGCA
GCCCCTTGGCATTACAGTAATTTCTGTGCGGCGCCGCTCGATGTTACGCT
TCTGGCGAACGTTCCGGAAGACGCGCTTAATGTCCCTCCTTTATTCTTTT
ATTACCCTAGAGCTACACAACAAACTACTACTGAGAATAAAGTGTTATAT
GTACGTATGTCATCCGAGCATCATGTTTGAGTTCAGGTCGGAACCGGACG
GGTGGGTCTGTCTGTGTGTTTTCTCTGTACAACCTCTTTTCTCCAATTCT
GTACGAATGCCTTGACGCCCCCCCCCCCCCCAGTATTACTGATATTATAT
ATTATAGTAGTAAAAGCAGCACTACAGGCCATTAGATTGTAATTTACAGT
TGATGATGCAGAACTTCTCGACACGCGGTCATCTGGCCTGCCGTCAATGT
AGTATGTATGTATGTATGTATAGTCATTACGTTCAGTACACCGGGCATCA
ACATGTATGGTTGTCAATGCTACTTGTGTTCAGTGGTCGGCCGAACAGGG
AAAATGTATTTTCCCTCCTTTCCCGTACGTGCCCGAGAAATTGATCTCGC
GAGACAGTCCCGTCCCGCGTCAGTCCGCTCATTCTCTGCACCCAGGCTGA
ATCCCGTGCTTTTTCACAGACTCCTCTCCTGCCCGCTTCCCGCGACTATG
ACGATAACGGCGTCTATCGATATAATCAACCGCCATACGCCATCGGGTCA
GTGCCGAATATAAAGAAAAATCAGAACGCACCTAGACCTTCTGAGCATGT
CCCCCAGTCAGGGGGAAAAAATGTCAAAACGTCTATAGGTGTAGAGTGTT
TCGGGTCACGCAATTAATTGCGTACCGATGGCGTTGACTACAATCAGTAG
AATCTGCGTTTGTGTGTGTGTGTGTGTGTGTATGCGGTTAGTTTTTCAGC
ACGAAAATTGTTTCTCTATTATTAATCTACTATGAAGTACCTGGTATTAA
CTTAATATTAATCTAATATGAATCTGAAAGCTCTCTATTAGCTCAATAGG
GCACGGTAGGGCGGCGTATACCTCGTAGTCAGAAGTCTGCGCGGAAGTAC
GTAGGACGTGAGTGGGCTACCATTGCTCGAGGCTCGAAGTGAACGCGAAA
AATCCCGAACGAGGCATAAGGGTGAATTGGAGAGATGTGAGTAGATCCTT
AGGATCACAGACGCACCGCATACCAAAAGGCTCGCGCTTTGCTTCAATCT
CTCCACGAGTTCCCCACCAAAAGCTGTCGCGGTTGGACCATTGTCACGAG
ACCAGTACAGCGCTTGATACGGGCCATTAATGCTCGGCGGGCCCGCTCTG
CACGTGGAGCAATGCTCTCACAAAGGACCTGCTCTTGGTGCCACCCCAGA
ACACTGTCTCGTGAGAAAGCAGGCTGTATATCGGAAGTAGGCTCGACTAA
TTTTGGGCCAAAACGGCGCTTTCCCTAAAAGGAAAATCTGATCTAAAACT
TTCGAAGGGGGGGTTTTACCACTGGTCTAAATATTGCTTTATACGTATTT
CCGTCTTGTTTGAAGCTCGCAATCACCCAAACAAGACAAAGTAAAGCGCG
CTTTGGGGACCCTTTTTCAGGATACCCCAGAACAACCTGTTTCGTGCTTT
CCCCATATGTCCACACGGAAAACATACCAGGTAGAAAGTAAAAAATCTTG
AAATAGTTACGACATCGTCGACATGACATTGTGTTGGAGAAACCCAGTGA
AGGTTCTAGGTCAAAATTTTAAAATTTTATGTCAGGGAAAGCGCTGTTTT
GGAGTTGAGCCTGCTTTTAATATGCAGCCCGCTTTCTCGGGAGACTGCGT
TCCAGGTTGCAATTCTTACGATAGTCTGTAACTGGTGTAATAACCTGGAT
TCCTGAGGTCTGAAAAAAGGTTAAATGGTTGTATATTACCTGTGCTATTT
AACACCAGGTACCTACTACAGACAGTATATATAACGTGTTCGAGTTTTCG
CACGAGCAGAGTCGGCCCCGACTTCATACTCGAACAGCAAAATGTATGAA
TTTTAATATGAGCAGGACAGCATACAAAGTGTGTGTGCGTACTTACGACG
TATTAAATTGCACATAACCGCGCAACCCGACCCCGTGTCATCATCCTATT
AAATAGCCATTCATCTGCTATTTGCATTAGTCCTACCAAGGGGTTAAGGG
GTATTAAGGGATCAGTGATAATTGTTACGTAAACCTATGATCACACTCGA
CGTTTATGTGTGTGTGTGTTGTGTGTATTTACTAAATTGCACATGAACGC
GCAATCCGGCCCTGCCATCCTAGTCATTCTATGCCACTCGCATTGATCCT
CCCAAGGGGGGGATCATGTGTGTGTGTGTGTATTTAGTGAATTGCACATA
ACCGCGCAATCCGACCGTGTCATCCTAGTCATTCTATGCCACTCGTATGG
ATCCTCCCAAGGGGGATCAATGATACTTATTACGAAAACCTCTCATCAGA
CGCGACAAAGGGGACACACTCTCTCTACTTGTACAGGTCTTACTCAATCC
CTGGGTACCTTGTGCTTCCCCCCGTGCTTCCTTGCTATTCTCTAGATTAT
CTGGGTTGGCAGCTACCGAACCAACCCTTTGTTGTCTACGTTTTTTCCTC
TTTCCACCCAAGTCTCCGGGTGTGTGTGTGTGTGTGTGTGTATTTATGAA
ATTGCACATAACCGCGCAATCCGGCCCTGTAATCTACTCATTCTCTGCTA
CTGCATGTAACCCACCTGGAATTTACTTTTCGTGGACATATTATTGACTA
TAAATGCGCGTGCATCCAGACATAACTTCTCTCCCCACTACGTCGGCCCT
CGGCCGGAACCCCACTCCTTCGACATGAACTACAACGCTCTGCCCGGAAA
AAAATATGAGGCTGAAAACGCGGGAAATGGTGGACAGGCTTGTCCCGCTT
AAACGCATGAGTAAAGCTAGTTGCTCGCCGCTTGGAGCAACAAATAGAGA
CGGAAATCCGACAAACAGGGGCGCTACGGCCAACTCTCCTTGTAACCTCC
TCATCCAAACCCCGACAATCTCGCCTCCACCATCGAACCGTGCAAAGTAC
AGTACTGCAGCAGTGGCGTCGTCATTCCGCCCCCTTCCCCTTTCAACACG
CAATCGGTGTGTGTCCCGACTACACCCGCACATATTTTCTTTCTACGTAA
GAAAATCCCCGCAGCCATAGGACCCGGGGTAGAACACCAACCGCAAGTCT
TTCGTTGGGCGCAAATCGTGAGGAGGAGAGAGTCAAGGGTAAAGCTAGTC
GGATACAACGTACCCAAATATGGTCTGCGCTCCTCGTGTGTGTACGCCGG
AACGCACAGCAACGTGAGGTAAAACTCCCCGAGTCCACGCAATTTGTGAT
CATTACTTTTGTAATGGATGCTTTATCCCCAGATGGGCACACCGATTGTC
TAGTAAGTCCTCCTCCCCTCTCGTCCCAAAATACTATTAATACGTACCAT
CACGCAGAAAGGCCCCACCAGGCCATGGAGATCGCTGCGACTTAGCGCAC
CGACTGCTGTTGGCTACTGTTGTTGCTATTGGTACGATTCCCGGGGCTGG
GATGGGTTGGAAAAAGTCGTAAGTCGGGGCAAAACAAAAAAAATGCGGCG
GGATTCATACCCAAGTCCTCGATGGAGGGGACAAAGCTGTCGAGCTAAGT
TGTCGCTAAACCGTACCTTTCTGCCACTAGCAGTCCCGCCTCTAGCTCTG
CCTTCTCGCTCCACGGTGCTTGCTGGACCGTTGTTGTCCCGAGCAGGCGG
GGCTCAGTCCATGCCACCGACCCCAGCCCAAAACGCCCCACCAGCCCAAA
AAGTCACACCAGGGCCACACAGACGACAGTGCTCCATGGAAAGGGAAGGG
GGCTACAGGCCGATCCCGTCCTCTGCTGCGGGATTCCGGCTTACCCCCTC
GGGGTATGTGTGTGTGGGTGTATTTATTAAATTGCACATAACCGCGCAAT
CCAGCCCTGTCATCCTAATCATTCTACGAGGTAGGCCACTCGTGTGGATC
CTCCCAAGGGAGGATCAATGATATTTATTGCGAAAACCTCTGATCATACG
GGACAAAGGGGACACAGTCTCTCTACTTATACAGCTCTTACTTGAGCCCT
GGGTACCTTGTGCTCCCCTCCCTGCTTCCTTGCGACTCTCTAGATTATCT
GGGCTGGCAGCTACTGAACCAACCCTTTCTTTTCTACGTTTTTTCCTCTT
TCCACCCAAGTCTCCCCCGTTTCCCACTTGGCGCCTACAACTCCTGTGCG
GTTTCTTGCACTTCTTCGCCCCTCTTCCGCCCTCCACGATCCTATCCTCG
TCCTCGTTCTCGTCCCCGTTCCAATCTCCGCTATTGCTCTCGTGTGTGTG
TGTGTTTATGTGTGGCATAGTCATGGCGTTCGGCAGATGGGGCAGCAACC
GCACAAGGTTGCTAATCCTGATATAGTAGTGGTCAGCTGAACAGGGAAAA
TAAATATTCCCCGTCCCCGTAAGCGCCAGAGAGTTTGGTCTCACGAGGCA
GGTTCGGCTGCCCCGTCCCGCGTCAGCCCGTTTTTTCTCCATACCTAGGC
TGAATATCGTGCTTACTCACGGGCTCCTCTCTTTTCGTCCGCTTTGGGCG
ACCACTCTTTGTCCATCTAAACCGTCAAGCGCCATCGGGTCAGTCCCGCG
TCAACAAAGTTACGCATTTTTGTACCGAAAGCGCTCACCACCGAGAGTCC
GCCGGCTCAGGGCCAGTAAGTAGTCCTCAGGGCCGCTCGAGTAACTGGTG
GTGGCTATTCAGTTAACCCCATGGACCATTAATGTGCGCCCCCTTTTTCC
CACACCCACTATACTAATATTGGTATATATAATGGACGTATGCAGTATCA
AGGCACCAGTTGTTGTATGTATGTATGCGTGCATGGTCATCACTCATAGC
AGAGTATGGATCGACCGTGTATGGTTGCCAGTCCTTTTCGTGGTCAGCTG
AACAGAGAAAGAACGTTTTCCCTGTCCCTGTTCGCGCCTGAGAATTTGGG
CTCGCGAGATAGGTTCGGCCGTCCCGTCCCGCGTCATTCTCCACACTCAG
GCTGAACCTGGTGCTCACTCACGGGATTCATTTTGCTTTCCGCGGCGGCG
TCCATTCATTTATATTTGCCGATGAGCTGGATCGAAACAACCTCGGACCC
GACCCGATCATCGGCCTGAGTCATCCCTCGATGATGCTCCCGGAGAGTTT
CGACAGTAAAGAGGGGGGGGTTCCACACCCCTGACGGCTCTTTGCCAGAA
TCCGCCTGCTGCATCTATGCCCCTTCACCGCCGGGAAGAACCAAGCTCGC
TCGCTCTTACCCTTCTCAGCACGTGCAACCTCACAATCTGAGGCTGATAA
AATTCTCGAGGCACAAGTCATGGTCATTCCTCGTGCGACGACGCGCCCGC
GCAGCATGCATGCTCTTTTTTTTTTTTTTTTTTCGAGGGGGGAGGGAGAT
CCTTTTTTCTTCAGTCGATGTCAAAAATAAAACTACAAACCCCGCCTCCC
TGCTCCCAAATGGAATGAAATCATAACAAAACAAACAAAATACTACTGGT
TTACGTTATAGGCGACAACGTCCAAGCGTGGAGGCGCTAAGTCCAAAAAG
TTCGAGCTGACGGAGGAGCAGAAGCAGGAGATTCGAGAAGCTTTCGATCT
CTTCGACACGGATGGTTCGGGTGAGTACTGTAAACTAAATTTATTACGGT
CTTTGTTTTTTTTTCCCCCGACCGGTGTCCGATCTTGCGCGTGCTGAAAT
GTGTCCACTCTTTTTTGCCCTCCATTTGGACGAAAAAGTGGCACAAAAGC
CTTGAACTAAGATGTTGCTTTCTCGGGGGTAAAAGTAGAGCGCTGCCGGA
GAGGAACACCCCTTGTTTTCGGATCCAAATCATAAAAATTGGGCCTGATC
TCACGGAGACGAAAACCCTCCGTTTTGGATGGGGGTGGTGTGTTGCCGCA
TGGCCGATTGTGAATGGTCATTGAAGAGCCGTTAACGTTATTGATGCGGA
GTGTGTTACACAGGCTGTACGCCCGTGTAGAGATAAATCGATCAAAGGTG
ACGACGAGTGCTGCCTTAACTTGCCCCGCAGGCACGATCGACGCCAAGGA
GCTCAAGGTGGCCATGCGAGCGCTAGGGTTCGAGCCGAAGAAGGAGGAGA
TCAAGAAGATGATCAGCGACATTGACAAGGACGGCTCCGGCACCATCGAC
TTCCAAGAGTTTCTCGAGATGATGACGTCAAAGATGGTACGGAGATCCCA
TGCGTAGTTTTGTGTAGAACCGCGCAATCTGGCCATGTGGTGCTGTTTGC
TCTGTATACTCTATAACCTATTCGCAATGGGGGGTCAACGATTGCTGTTG
TCACAAAAACCTCTGGTGAGAAGAACTGCACAGTCTCTCGCTACAGCCCC
TCTCTAACACCCCAGCCCCCCCGGCATGTTGCGCTCCCCTCCCCGTTTTC
TGAGTGTCTTTTCTTTCTCTCGCGCCAATTATTCTGAGCTACCTGGTACC
TGTATTTGGTGCCCCCCCCTCCTGTGGCAGATCAAGCTATTGTCGTTGTC
ACAAAAAAATCCACTCAGACACGCGCGGGGGTGTTTGTATTTATTAATAG
TAAGTTGCACATAACCGCGCAATCCGACCCCGCCTTCTTAGTCATTCTGT
GCTGCTCGGATCGATCCTCCCAATGGGGATCATGAGTGGTTGTTTTTACG
TAAACCTCTGATGTGAAGCAACGAAGAGGAGATATTCTCTGTAGTTGTTG
TGAAACCCATAGCGTTGTACATTCCCCTCGATGCGTCCTTGCTGTTTGTC
TCGCTCGCCCACCGCCGGCACCTGCTGTATCAAGACTTTCTCGTCGACGC
TTGCTTTAGCTTCCTGCTGCATCAACACTCTTTCACCGATGCTTTCTTTT
GTTGCCTACCCCTGCTAGGCGGATTCTTGCGCACCATCGGGTGTGTGTGT
GTGTTGTGTGTGTGTGTGTGTTTTATTAAATTGCACATAACCACGCAATC
CGGCCCTGTCATCCTAGTCATTCTATGCCACTCGCATTGATCCTCCCAAG
GGAGGATCAATGATACTTGTATGTATATTATTCAAGTATTAAATTGCACA
TGATCGCACAATCCAGCCATGTCCTGCTAATTATTGTAGGCTACCAGTAC
TTGTATTTCATCCCTACAACCGGGTCACAATGATTGGTCAAAGATTGCCC
AATGATTGTCAATGATTTTTGTTGCCACGAAAACCTCTTAGATGAAGTGT
GTGTGTGTGTGTGTGTGTTTATCAAATTGCACATAACCGCGCAATCCGGC
CCTGTCATCCTAGTCATTCTAAGCCACTCGCATTGATCCTCTCAAGGGGG
GATCAATTATACTTATTATGAAAACCTTTGATCAGACGCGACAAAGGGGA
CAGACTCTCTCTACTTGTACATGTGTGTGTGAGTGCGTGTGTATTTATTA
AATTGCACATAACCGCGCAATCCGACCCTGTCATCCTAGTCATTCTATGC
CACTCGATCTGATCCTCCCAAGGGGGAATCAATGATACGTATTACGAAAA
CCTCTGATCAGACGCGACAAGGGGGAGGGAGTGTGTGTGTGTCTGTTCCG
TCGCATGGCCGGGCCAAGTGGGTAATGTTAACATTCACTCTCATCCAAGT
CGATATATACCTGGTATGCCTCTGCCGCGAGAGCCGAAGGCAATATTTTT
CGCTCCAAACCCGATATTTCGCCCGACGCCTCTACATCATCACTCTTACC
AATGTGGGAATCCTCAGAGCGAGAAAGACTCGAGGGAGGAGATCTTGAAG
GCGTTTCGGCTGTTCGACGATGACGAGACGGGGAAAATTTCTTTCCGAAA
CCTCAAGAGAGTGGCGAAAGAACTCGGGGAGAACATGACAGACGAGGAGC
TACAGGTAACGCCTCCTTACATGGAAAACTTTAAAATCGCAGTTGGGCTC
CAGATTGTGTCTCTGGGGGCGCTTCCTACGTAGTAAAATGCACCAAGTCG
GAGATTTCTATACATTCCTCTTGAAGTTATGACGCGATCAGATCACGCCC
GAGTGTCTTGAGAATCCTTGTACCGATTATTCATGCGGATTTAGGGGCTT
TCGCTCAAAATGATTTTCAAGTGTTAGTTGTACTCATGGACTATACTTAT
AATATCATAGCAGTTATGGTTATTATTTAGGGACCCTTAAGACTAGATCT
AAACACTTGTGAAAGAGAATAACCGCTCGTGTCTGAGGAGGCATCTGCGA
CGTCATGGTTCCCCGGTTCTGTTCTTGTGGGCAATGTCTACGCAGGAAAT
GATTGACGAGGCTGACAGGGATGGCGACGGCGAGATCAACGAGGAGGAAT
TCTTGCGCATAATGAAGAAGACTTCGCTGTACTGATCGAGCGCCGGGAAA
AAGGAAAGAACAAAAGACCGAGGCGGATTCAAACAATAAACAATCGAGGC
TCATGAAAACGCTCGTTCTTTCGGTTTTATTTTTATATTTAATAATAAAC
TTTGGTTCTGTACAGTATAGTACGGTTGCACGCGGCATTATTTTTTGTTT
TTGTTATTTAATCGAGATGCTGAGGATGCAAAACTGGGCTCCTGAACAGT
CAACGCCATCGTACCCGTGCCGGGAAAAACGCCGCGTTACATCGTAGAGC
GCCTTTGCGGCTCGTGCTGAGGAGGTGTAAATATCCTCGAGACAGCCCTG
CGACTGATATATCATTTTCTCTCGTAGCCACGCCGCCGAAGCGCACCTTG
TAGAAAAAGCTGTGTATGTTATGTTATAGTATCATCGCTGATACGAAGAG
TTGTGCAACTCACCTGGAATGCTGGGAACTGAAATCTATGCACGTGTTGT
ACGGATTCTAAGAGGTCGCGGGGGGAAACGCACAAAAAACGTGAAACGCA
CGCATGCACCAATCAAATCTCCCCCAAGAAGGGGCACGAGAGGAGACGCG
GTACTTTCAACATGCCCACTTCATACCAATAGTGGCCTTGTGCCAGCGGA
CTCTTGGCAGTGAACGCCATCGGTACGCAACTGCGTGACCCGATAAACTC
GGGACTGACCCGATGGCGTATGGCGGTTTTAAATAAATAATGGACGCCGC
CGCGGAACTCGGGAGGAATACCGTAAGTAAGCACCAGATTCAGCCTGAGT
ATGGAGATCAGCAGGCTGATGCGGGACGGGACTGCCGAACCCACCTCGCG
AGACCAA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig898:32118..42224-

>mRNA_A-nodosum_M_contig898.14.2 ID=mRNA_A-nodosum_M_contig898.14.2|Name=mRNA_A-nodosum_M_contig898.14.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=666bp|location=Sequence derived from alignment at A-nodosum_M_contig898:32118..42224- (Ascophyllum nodosum dioecious)
ATGTTTGATACAGACACACCCAGAGTGTGGAGAATGAGCGGACTGACGCG
GACCGGGCCGGCCAAACCTGTCTCGCGAGGCCAGATTCTCAGGCGCGAAC
GGGGACCGGGAACGAATTATTTTTCTTGTTCAGCTGACCACGAGCAGGAT
TGGCATCGATGCATGGTCATCACGGCGACAACGTCCAAGCGTGGAGGCGC
TAAGTCCAAAAAGTTCGAGCTGACGGAGGAGCAGAAGCAGGAGATTCGAG
AAGCTTTCGATCTCTTCGACACGGATGGTTCGGGCACGATCGACGCCAAG
GAGCTCAAGGTGGCCATGCGAGCGCTAGGGTTCGAGCCGAAGAAGGAGGA
GATCAAGAAGATGATCAGCGACATTGACAAGGACGGCTCCGGCACCATCG
ACTTCCAAGAGTTTCTCGAGATGATGACGTCAAAGATGAGCGAGAAAGAC
TCGAGGGAGGAGATCTTGAAGGCGTTTCGGCTGTTCGACGATGACGAGAC
GGGGAAAATTTCTTTCCGAAACCTCAAGAGAGTGGCGAAAGAACTCGGGG
AGAACATGACAGACGAGGAGCTACAGGAAATGATTGACGAGGCTGACAGG
GATGGCGACGGCGAGATCAACGAGGAGGAATTCTTGCGCATAATGAAGAA
GACTTCGCTGTACTGA
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