mRNA_A-nodosum_M_contig8965.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 1274 bits (3296), Expect = 0.000e+0 Identity = 808/1827 (44.23%), Postives = 987/1827 (54.02%), Query Frame = 1
Query: 1 RCAKGPLPFAPVIKERPVLACDHPQGRLDGLDRPLHLMDDVLHPSVLHKCASDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLPNKELLTSDKILTDCDALKPLFFNYPGDGTNFLDGLVLAREGFEEEDPYRMRVCSTCLDDMRKNKLPKAAKANGFVLGDFPEELQAASWVEMIAASPVRMSGTVLALEQFKIGQVPGSAKSMMRGTFTFYLQNSYAIGQHLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQEALFPVTDRANSIANARSIHAHGNREPE-------TTVK----GNGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRQ------------------------------------------------------------------------------------------DLLVLRMCAHFSK---------------EAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRPAIRALITSMESVHAGASWTTYNKRSTRMKGISFTMQMGQPFFWMTVSPSDTNSPIVLEMAGFKIDVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHGYNDVTASSRDSAASRPTPDPLVVNAKEGIAQPHQRHVFPVM-VSTAATFDIAFARLMYLDLAELTPGGKLAQVPTDLSQIQP*GLVQIWIRRRRKAFEHETTVLRGPCTFHTNGNMEISRIVYPPGDPTTANGMAEAHAFELAFNSTISELGGDDNQDAN--SDRFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYGSGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYRALPKSSRSAAATTQMIMPTATSLRKTRTTLYPKIGS*AVLHVTVTAASVNTAKIGSRFYVRHQ*W*TSCATSPGGHSGSGSLPTTAVHVFTLFQPRRPQKQRRIVAARPRRVDETNAKERKSSSSLHVNNRP*CRQSYRERNVLRRLRQQPRHGQRRNQRYTTNCRSSPHQDLRRYGVRHIRPCWV*RRR*LTNYSQRFVEQKINERHRTGLVEDNGFLRCVIEKGDGSTRACL*-----NDELFASNIPS*FNLDITYSNAFCSVRPLRLG-PISYSPTVNFIRRFVAISS--------------TCIQRQT*PYQRRSGQNGRRTGSRVSTPRLFLNCSRVWVKPKATAGFLHLRERYACEKDFASFRRVETLHWWWSWSG*KSRTQSNESFHRM---PGPRWTNRRRTYARRRF------------SRKTSCCCRGCNY------TFHLPIKCGSIGRKSFG-----NHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNL------PVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYAPLMDRLLLAKTTYNDVKLFNKRVLDGSSGLHANDCYDGRVIAFRNKVNTVLTLPMMRTWCMANTTPLFIAPAVDELVEDERPGVAKKV 4968
R A+GP+PF P+IKERPV ACDH +G LDG+DRPL+L+D VLHP C VAH+V +S SVS AV L CTK DC+WV AE L NK+LLT +KILT+C KP F NYPGD LDGLVLA E FE +P+R+RVCSTCL DMRKNK+ + K GF+LGDFPEE ++A+WVEMIAA+PVRMSGT +ALE+FKI + GSAKS+MRGTFTFY+QN YA+G+HLPACATDVAG+FTCAL GSK PEQLR FGARRSM AQTS++N RTYAEDG IPK IQ+AL PVT++ N++ANARS HA GNREPE T+ K GN + ++ A FIIETN V+P+G DMAN YR TRLR L+ + + R FSK EA NNARWKI G+P A+ L S++PED+ AAAKE+EQGTG+ SF MQMGQP +WMT SP+DTNSPIVL++AG IDVTSRLK+D+PDY ERLRLVA +HV SAFFYHSV +AVLTC LRFGA DGDGGVLGRVK +GMTEEQRRLMLHCHLLVWVYGYNDFS FR L+DK+P+KYNKLARFLEQVIFNQVATL D NL GH Y ++ +S D+ S PDP V AKE IA+P FP V D AF+RL+YLDLAE+TP L + ++ + + KAFE ET VLRGPCTFHTNGNM I+ +VYPPGDP+T++G+A A AF+ AF+++ISEL DN ++N +DRF+A++RRL HINPYNP IQF+IRSNMDLKVLL D DAKGI FYILNYATKT NESQGE +EM VRLVRSCLCKQL SL+ GGPAAASKVFDL DAKIS TSPCPMG L+A+ GKLT QR+HL YRNRC+ D +HPLH +SYVVWHR VRVERY P +S + + + N + +H +P + S P V + +K ++V R+ + +++ R++ R QQ H + C P DL +++ W + QR + ++ R D + + G G+ +D AS IP + + + P+R P S T + I+S C++ T + S PK +L L R A + +F R+ + +S + R+ G + A + F SR + RG T H + +GRK+F NHDDQSP+ D QAIHWKGV MLA+EEVSMVGCELLVALNKAACSMFPM+KDKPFGNL P+V CG FNQLS + ++K + + SL+KYG DLFRMVNACV+LDQGSNRFSPTYAPLMDRLLL+ TYND++LF+ RVL+GS GLHA DCYDGRV NTVLT+PMMRTWC AN TPLFIAPA+D V DERPG+ ++
Sbjct: 115 RVARGPVPFVPIIKERPVSACDHREGLLDGIDRPLYLVDGVLHPPY---CTKVLVAHIVDSSLSVSRAVYDLFCTKTDCVWVKAEELQNKDLLTPNKILTECAMFKPSFINYPGDKAKVLDGLVLALEDFEAGEPHRLRVCSTCLKDMRKNKMGRQRKYYGFMLGDFPEEFRSANWVEMIAANPVRMSGTAIALEEFKIHGISGSAKSLMRGTFTFYMQNLYAVGKHLPACATDVAGAFTCALFGSKQKPEQLRPLFGARRSM------------------------AQTSDENPRTYAEDGFIPKEIQDALVPVTEKNNTVANARSTHAQGNREPEEPGGDSSTSAKYGNNGNTDSSTDEGAPASFIIETNVVLPTGEDMANSREYRSTRLRALQSMMKKSAPSRTTNVATGASMREQANAKSAAAARRAPPFLPPNAMVVTHTGNMVSDFYDEGLFVVAYFNLFSHGIGGHLDVRRRPVSCKEWAQIFLRRRDGRFSKDKTFWFCVCALTFRREATNNARWKIKGGMPSDAAETLASISPEDIPAAAKELEQGTGSCD-------------------------------------SFIMQMGQPLWWMTFSPADTNSPIVLQLAGVTIDVTSRLKSDFPDYVERLRLVACDHVTSAFFYHSVTKAVLTCWLRFGATDGDGGVLGRVKACVGMTEEQRRLMLHCHLLVWVYGYNDFSIFRELMDKSPEKYNKLARFLEQVIFNQVATLTDTNLAFDGHEYEHMSRASEDTGTSEAGPDPQHVAAKERIARPPPTACFPRDGVDRCRVHDEAFSRLVYLDLAEITPAVSLHKCQLACNKFNHRDSCRFGYGKDGKAFEQETAVLRGPCTFHTNGNMTINGVVYPPGDPSTSSGIAAAAAFQAAFDASISELDDGDNCNSNPKADRFTAVLRRLGAHINPYNPFIQFVIRSNMDLKVLLEDIDAKGIMFYILNYATKTA------------------NESQGETSKEMVVRLVRSCLCKQLASLSFGGPAAASKVFDLSDAKISLYTSPCPMGSLIAFG----------------------------------------GKLTAKQRSHLRYRNRCDRTDTEHPLHCVSYVVWHRPVRVERYT--PGAS----------------------------------NCVNRSDTDNDSSDDDMDEPQH---------TPQRRGRASSDPYDCVGKYR-------KKWIQVV--------------RRKAVMVNI-----------MRDIPRADTQQEDHCR------LLLCMFLPFFDLS--NLKNSDESWE-------SAMQRVEDSDSWDKQRANKENDAPMSHSLDDAGHGAENDIFLIEYGDDDNDSASVIPE-TAIGLRTKIVVDTALPVRSWHPRSGRSTEDVETDLTKITSWSGSSDPTYMAQQEKCLEAMT------ESEVASLAESTSXXXXXXXTTDSHEYDPKVLDPYL-LELRSASQAEFGLNRKQRLAFFVFSNGMLAKKVSPGSDSLRLYIGGGAKSGKSHVLKAMKAFIECPALVGQIEDSRMLAVAFRGQQAAAVGGTTIHSVCQ---VGRKTFRGSLSRNHDDQSPMKDTQAIHWKGVNMLAVEEVSMVGCELLVALNKAACSMFPMHKDKPFGNLQPFGNLPLVLCGGFNQLS----NFTCYWSWQLEKEKNMSSLVKYGADLFRMVNACVVLDQGSNRFSPTYAPLMDRLLLSSPTYNDIRLFDTRVLNGSPGLHAFDCYDGRV-------NTVLTVPMMRTWCKANITPLFIAPAMDSFVGDERPGLRDEI 1705
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 1251 bits (3236), Expect = 0.000e+0 Identity = 777/1717 (45.25%), Postives = 999/1717 (58.18%), Query Frame = 1
Query: 10 KGPLPFAPVIKERPVLACDHPQGRLDGLDRPLHLMDDVLHPSVLHKCASDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLPNKELLTSDKILTDCDALKPLFFNYPGDGT--NFLDGLVLAREGFEEEDPYRMRVCSTCLDDMRKNKLPKAAKANGFVLGDFPEELQAASWVEMIAASPVRMSGTVLALEQFKIGQVPGSAKSMMRGTFTFYLQNSYAIGQHLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQEALFPVTDRANSIANARSIHAHGNREPETTVKGNGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRQDLLVLRMCAHFSKEAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRPAIRALITSMESVHAGASWTTYNKRSTRMKGISFTMQMGQPFFWMTVSPSDTNSPIVLEMAGFKIDVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHGYNDVTASSRDSAASRPTPDPLVVNAKEGIAQPHQRHVFPVM-VSTAATFDIAFARLMYLDLAELTPGGKLAQVPTDLSQIQP*GLVQIWIRRRRKAFEHETTVLRGPCTFHTNGNMEISRIVYPPGDPTTANGMAEAHAFELAFNSTISELGGDDN-QDANSDRFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYGSGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYRAL----PKSSRSAAA--------TTQMIMPTATSLRKT-------RTTLYPKIGS*AVLHVTVTAASVNTAKIGSRFYVRHQ*W*TSCATSPGGHSGSGSLPTTAVHVFTLFQPRRPQKQRRIVAARPRRVDETNAKERKSSSSLHVNNRP*CRQSYRERNVLRRLRQQPRHGQRRNQRYTTNCRSSPHQDLRRYGV----RHIRPCWV*RRR*LTNYSQRFVEQKINERHRTGLVEDNGFLRCVIEKGDGSTRACL*NDELFASNIPS*FNLDITYSNAFCSVRPLRLGPISYSPTVNFIRRFVAISSTCIQRQT*------PYQRR------SGQNGRRTGSRVSTPRLFLNCSRVWVKPKATAGFLHLRERYACEKDFASFRRVETLHWWWSWSG*KSRTQSN------------------------ESFHRMPGPRWTNRRRTYARRRFSRKTSCCCRGCNYTFHLPIKCGSI-GRKSFGNHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNLPVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYAPLMDRLLLAKTTYNDVKLFNKRVLDGSSGLHANDCYDGRVIAFRNKVNTVLTLPMMRTWCMANTTPLFIAPAVDELVEDERPGVAKKV 4968
+GP PF PV+K PVLACD P+GR+DG DRP H++D++ HPSVLHKC SDF H+V + S S +C C DC V A++LP+K+LL +D L C A++ FFNYPGD + LDGLVL R GFE PYRM+VC CL + K ++P+AA ANG LGDFPE L++A++VEMIAASPVR+SG VLAL++ K G V GSAKS MRGTFTFY+Q++Y + LPAC TD+AGSFTCALVG KP QLRR GARR MV+ LLDFQLD+ +RL G H LAR+AQ + +NL Y+ DGSIPKA+ +A+ P+ D A + +NARS HAHGNRE + T G G+++ +D TAPF+IETNAV+ +G D+A + RLR L + + + EAI NARWK+T + + ++ L +VTPEDL AA +E G G S L+DR I ALI +MESVHAGASWT +NKRSTRM IS+ MQMGQP WMT++P+D NSPIV++M G IDV+S+LKA++PDY ++LRLVA + VASA F+H+ I+ VL+CLLRFGA+DGDGG+LGRVKGY+GMTEEQ+RL+LHCHLLVWV+GYNDF+SFR L+D+TP +Y +LA++L+ +IFNQVATLAD+ +HG T D+ + DP +AKE + + FP D +ARLMYLDLA +TPG L + ++ + K ET V RG C F T GNM I +VY A A AF+ AF+ +I+ L GDD D SDRFSA IRRL +HIN +NP+IQF IRSNMDLKVLLRDSDAKGI FYILNY+TKTEQTLDVLLPLL+PVVERIR+E+ +E+AVRLVRSCLCKQL+SLNIGGPAAASKV D+PD KISH PCPM PLL WA SRD P +++ D +I++ +GKLTV QRA+LLYRNRC+PDD H LH MSYV WH+LVRV RY L P ++S+ A T Q P + S R+ R Y +G H A + + + T P H L + FTL K ++A + +ET +E +++S ++ + ++ H L YG R + P RR T + FV + G D+ G TR D AS+I D+ S F + + L S S + +SS T PY R G + + G R + R+ N + T+ H + ++F RR + ++ +G ++++ N ++F P R + K + G T H GS G G+HDDQS L D +A+HWKGV +LAIEEVSMVGC LLV L+KAACSMFP++K KPFGN VV GDF+QLSPVKA SLA GA +RR + +YG DLFR NACV+LD+ SNRF+P YAP+M+R L ++ +DV L N V+ S A+ +D RVIAFRNKVNTVLT+PMMRTWC A T LFIA A D V +RPG +V
Sbjct: 163 RGPPPFVPVVKTPPVLACDSPEGRMDGHDRP-HMLDNIHHPSVLHKCLSDFTNHIVNSVRSTSCGICDRNCKSMDCKLVAAKDLPHKDLLKADDKLLACSAVRGTFFNYPGDDSVPKLLDGLVLERLGFESTSPYRMQVCKECLQSLLKKRIPEAALANGLWLGDFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDKDNRLVGQHTLAREAQLAPENLHGYSNDGSIPKAVLDAILPIKDSAKAYSNARSTHAHGNREDDPTPDG-GIESTDDGPTAPFVIETNAVVDTGDDLAVAGACKPNRLRDLGRAMQTASGSPSLA-EAIENARWKLTGRISPADSRTLSAVTPEDLADAAAAMENGRGNGSVLSDRAGIAALIKTMESVHAGASWTPHNKRSTRMIAISYIMQMGQPLIWMTINPADVNSPIVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHGGVEGISTLPVGDTCQT----DPNHRHAKECLPTAPPTNCFPRDGEDRCPVHDQDYARLMYLDLAGITPGANLHKCNATCTKYNHLNSCRFGYGEEGKPLVAETVVKRGRCVFDTKGNMIIDGVVYSVHSTDDAAAAASTPAFQTAFDESIATLIGDDGLPDPLSDRFSADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDEADRVDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWACSRDGPLDGDTSR----PDDXXXXXXXXXXXXDVIITPFKGKLTVAQRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVIRYDPLDNRQPDLAQSSDASDTDSDCDTVQPGDPVSPSGRRASARTGRPRACRYDFVGE--YKHKWQQVLREKPAMVNIMRDIPRK------DTQPVAHCRL--LLCMYIPFFTLDD----LKTTGMLAQKLAAAEETAKREAQNASFTASPDKQ----------------------------QDNSDKAEVH--LCDYGDDEPGRSVIPTSA--RRLQTEF---FVNDALRSFLAAGFSGDDSLPESAFPLLSGRTRQQTMED---ASHIT--LGTDVAASTLFVARQESSLQQKSTSCAASMADDAQPVSSPSYSTGTDGGPPVQPYLIRLRAASQEGLSDQARGERDAR-RVATNAAVAQTDVGRTSNLQH-SVAVSIAQEFGLNRRQRLAFFIFA-NGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAIAAEVPRGRLLTVAYQGKQAASVGGT--TVHSVCSTGSRDGGNLSGDHDDQSSLPDAKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPIHKAKPFGNRVVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDE-SNRFTPIYAPIMERCLRSECISDDVDLINNHVMGTSR--KADSLFDARVIAFRNKVNTVLTVPMMRTWCKAKGTTLFIAAAHDVYVGHQRPGATAEV 1806
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 1062 bits (2747), Expect = 0.000e+0 Identity = 580/1135 (51.10%), Postives = 731/1135 (64.41%), Query Frame = 1
Query: 7 AKGPLPFAPVIKERPVLACDHPQGRLDGLDRPLHLMDDVLHPSVLHKCASDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLPNKELLTSDKILTDCDALKPLFFNYPGDGTNFLDGLVLAREGFEEEDPYRMRVCSTCLDDMRKNKLPKAAKANGFVLGDFPEELQAASWVEMIAASPVRMSGTVLALEQFKIGQVPGSAKSMMRGTFTFYLQNSYAIGQHLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQEALFPVTDRANSIANARSIHAHGNREPETTVKGNGMDTIED------STTAPFIIETNAVMPSGGDMANVTHYRGTRLRTL------------------------------------------RQDLLVLR----------------------------------------------------------------MCAH-FSKEAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRPAIRALITSMESVHAGASWTTYNKRSTRMKGISFTMQMGQPFFWMTVSPSDTNSPIVLEMAGFKIDVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHGYNDVTASSR-DSAASRPTPDPLVVNAKEGIAQPHQRHVFPVMVSTAATF-DIAFARLMYLDLAELTPGGKLAQVPTDLSQIQP*GLVQIWIRRRRKAFEHETTVLRGPCTFHTNGNMEISRIVYPPGDPTTANGMAEAHAFELAFNSTISELGGDDN-QDANSDRFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYGSGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVER 3063
A PL FAPV+K+RP+LA +H QGR+DG D P HL+DD+ HPSV+HKC +DF +V + S AVC C K C V ++LP+K LL +++ L +C A++ FFNYPGD N LDG VLAR+GF+ + P+ +RVC CL+ + K+K+P+AA ANG LGDFP+ L+ A++VEM+AASPVR+SG VLAL++ K+G V GSAKS+MRGTFTFY+Q++Y + LPAC TD+AGSFTCALVG+KP+ QLR+ FGARR MV LL FQLD+ ++L GVH+LA++AQ S +NL TY +DGSIPKAI +AL PV D N+ ANARS HAHGNREP+ G D T PFIIETNA+MPSG D+A +H + RLRTL Q+ LVL +CA F +EAI+NARWK+ VP+ VA ++ VT +DL A A E+E G+ +S L DRP IR LI +MESVHAGASWT YNKRSTRM ISF MQMGQP FW+T++P+D NSPIV+ +AG ++DVTSRLKAD+P Y ++LR VA + VASA F+H+ I+AVLTCLLRFGA DGDGGVLGRVKGY+GMTEEQ+RL LHCHLLVWVYGYNDF+SFR L+DKTP +Y +LA +L++VIFNQ+ATL+D+N + G V S ++ A P PD L+ AKE +A P FP D +A LMYLDLA LT G L + + + + K +T V RG C F T+GNM I+ IVY A A AF AF+++I+ L D+ D SDRF+A +RRL +HIN +NP+IQF IRSNMDLK+LLRDSDAKG+ FYILNY+TKTEQTLDVLLPLL PV ERIR +S G P +E+AVRLVRSCLCKQL+SL+IGGPAAASKVFDLPD +ISH T PC M PLL WA+SRD P + ++R + SD +I++ +GKLTV QR +LLY RC+P+D +P+H MSYVVWH+LVR+ER
Sbjct: 48 AARPLAFAPVVKQRPILAFNHSQGRIDGHDTP-HLLDDIHHPSVMHKCLADFDTFMVNSIRRTSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRG-----VQPSPEVETDAPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGPL--DGEVDRVDDSSDXXXXNDSDVEESIIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLER 1174
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0 Identity = 732/1960 (37.35%), Postives = 986/1960 (50.31%), Query Frame = 1
Query: 1 RCAKGPLPFAPVIKERPVLACDHPQGRLDGLDRPLHLMDDVLHPSVLHKCASDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLPNKELLTSDKILTDCDALKPLFFNYPG-DGTNFLDGLVLAREGFEEEDPYRMRVCSTCLDDMRKNKLPKAAKANGFVLGDFPEELQAASWVEMIAASPVRMSGTVLALEQFKIGQVPGSAKSMMRGTFTFYLQNSYAIGQHLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQEALFPVTDRANSIANARSIHAHGNREPET---TVKGNGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTL--------------------------------------------------------------------------RQDLLVLR----------------------MCAH-FSKEAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRPAIRALITSMESVHAGASWTTYNKRSTRMKGISFTMQMGQPFFWMTVSPSDTNSPIVLEMAGFKIDVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHGYNDVTASSRDSAASRPTPDPLVVNAKEGIAQPHQRHVFPVMVSTAATFDI--AFARLMYLDLAELTPGGKLAQVPTDLSQIQP*GLVQIWIRRRR-------------KAFEHETTVLRGPCTFHTNGNMEISRIVYPPGDPTTANGMAEAHAFELAFNSTISELGGD-DNQDANSDRFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYG-----------SGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYRAL---PKSSRSAAATTQ--------------------MIMPTATSLRKTRTTLYPKIGS*AVLHVTVTAASVNTAKIGSRF-YVRHQ*W*T-SCAT---------SPGGHSGSGSLPTT----AVHVFTLFQPRRP--QKQRRIVAARP----------------------------------------RRVDET--NAKERKSSSSLHVNNRP*CRQSYRERNVLRRLRQQPRHGQRRNQRYTTNCRSSPHQD-------LRRYGVRH-----IRPCWV*RRR*LTNYSQRFVEQKINERHRTGLVEDNGFL--RCVIEKGDGSTRACL*NDELFASNIPS*FNLDITYSNAFCSVRPLRL------------------------------------------------------GPISYSPTVNFIRRFVAISSTCIQRQT*PY---QRRSGQNGRRTGS-RVSTPRLFLNCSRVWVKPKATAGFLHLRERYACEKDFASFRRVETLHWWWS-----------------------WSG*KSRTQSNESFHRMPGPRWTNRRRTYARRRFSRKTSCCCRGCNYTFHLPIKCGSIGRKSFGNHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNLPVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYAPLMDRLLLAKTTYNDVKLFNKRVLDGSSGLHANDCYDGRVIAFRNKVNTVLTLPMMRTWCMANTTPLFIAPAVDELVEDERPGVAKK 4965
R +GP F P++K P+LACD QGR+DG D+P ++DD+LHPS +HKC DF +V + S S AVC +L + D + A +L + +LL + + C ++ FF YPG D + LDGLVL R GFE + P+R+RVC+ C D+ +N++P+AA ANG LG+FPE L++AS+VE+IAASPVR+SG VLAL++ K+G + GSAKS+MR TFTFY+Q++Y + LPAC D+AGS T LVG+ TP QLRR GARRSM+ L F LD+ + L G H LAR AQ S +NL T++ +G +PKAI +++ V D+ S ANARS HAH NREPE T + G+ + TAP ++E NAVM +G D A + RLR L R+ L R +CA F +EAI NAR+K+ + +A L VTP DL AA E+E G+ +S+LN+ IR+LI MESV +GASWT +NKR TRM IS+ +QMGQP W+T+SP+D NSPIV+++AG IDVTS+LK+D+PDY E+LRLVA + VASA FYH+ I+ VLTCLLRFGA+DGDGGVLGRVKGY+GMTEEQ+RLMLH HLLVW+YGYNDF SFRAL+DKTP++Y +LAR+L+ ++FNQ+ATLAD+N + G + + +++P DPL+ +AKE + P R FP D+ A+ARLMYLDLA +TPG L + + + + ET V RG C F T+GNM I +VY A A AF+ AF++ ++++ + D S RFS +RL THIN +NP+I F +RSNMD+KVLL+ SDAKG+ +YILNYATKTEQTLDVLLPLL+PVVERIR +S P +EMAVRLVRSCLCKQL+SL IGGPAAASKV L D K+SHS PCPM PLL WAS RD+P D NS G D SG+I++ +GKLTV QR HLLYR+RC PDD +HPLH SY W R VR+E+ L P+ + +A + P+ +T +T P+ G + N + G+ YVR + + +C T P + +PT+ H F+ F P P RR+ +R DET +A R + R + E + ++L +RR +R + + D L YG + P V RR LT+ FV+ G D + G AC D F D+ + AF S + L G S++ T I+ PY R++ Q+G + R R + V L ++ ++F R+ + ++ +G ++ +F P + R F K + G P S G S G H+ QS L +A HWKG +LAIEE+SM+ C LLV L+ ACSMFP++K +PFGN VV GDFNQL P+KA SLA G + ++R + +YG DLFRM NACV+L + SNRFSP+YAP+M+R L +K T +DVKL N V+ S+ +A +D ++ FRNKV+T+LT PMMR C A TPLF+A A D V+ +RPG A++
Sbjct: 126 RAERGPRDFTPIVKSPPILACDDEQGRIDGNDQPF-MLDDILHPSRVHKCIHDFCTFMVNSIESTSCAVCDVLHREIDINLIAATDLRHADLLKASDKMLGCAGVRDRFFGYPGGDDSKCLDGLVLERLGFEADPPHRLRVCAECFRDLSRNRMPEAALANGLWLGEFPEHLRSASFVELIAASPVRVSGIVLALDELKVGNIAGSAKSLMRSTFTFYMQDAYGVQLKLPACDADIAGSITIVLVGANATPAQLRRLLGARRSMIEDLNTFLLDKDNALVGEHTLARQAQQSPENLATFSVNGDVPKAILDSIVAVQDKTGSYANARSTHAHENREPEVPANTDRAGGILRDDTLPTAPMVVEINAVMDTGEDRAVAESSKPARLRGLGSSMCSGDPSLAQQAAAEAAAAVRAGRPSPLGTDKAMVLTHSGKLVSDFSEPGLFIAAFYDLFPHGVGGPLDKRRRSLTFKRWARILLKRRDPRFRKHRTFLFCVCALIFRREAIENARFKLRGNISTRIASLLAKVTPADLSQAAAEME-GSFDFSSLNE--GIRSLIRMMESVSSGASWTIHNKRCTRMIAISYMIQMGQPLIWLTISPADHNSPIVMKLAGVDIDVTSKLKSDFPDYTEKLRLVASDPVASAQFYHNTIQGVLTCLLRFGASDGDGGVLGRVKGYVGMTEEQKRLMLHAHLLVWIYGYNDFVSFRALMDKTPRRYTELARYLDNIVFNQIATLADINRVMRGVDPAHLPPEVGNHDSAQPALDPLLRDAKECMPVPPARSTFPPQ-GEPPDEDLRDAYARLMYLDLACVTPGANLHKCQATCHKYNHKDSTRXXXXXXXXXXXCRFGFGDDGRPLAQETVVQRGRCVFDTSGNMTIDGVVYSHSSADDAAAAAANAAFQEAFDNAVADVRQELARSDPVSGRFSVEHKRLHTHINSFNPVIAFAVRSNMDIKVLLKGSDAKGLLYYILNYATKTEQTLDVLLPLLIPVVERIRADSGDAPEKEMAVRLVRSCLCKQLSSLPIGGPAAASKVLGLSDEKLSHSPVPCPMTPLLTWASKRDKPA-----------DADNSP--GDDXXXXXXXXXXXDDSGVIITPFQGKLTVAQRTHLLYRSRCRPDDTEHPLHQKSYFAWCREVRIEKCPTLHGRPRGKQPSARGNDDDDVDDVDDGHPGDECLDDDPVSPSG----RTASTRAPRRGRPRATRYELVGEYQNKWEQGALHPYVRTRLYPLCTCLTFARTHIVREKPAISNIIKDVPTSDTQPVAHGFSSF-PLFPCLSSARRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLLICMFVPFFTLDDLKRADETWPDALRRADDDNRWDPGTYPFRLNI-EGMLAQKLAAAEETAKRRAERQLLSEKPDTLGDNVAGDVLLDSYGGEDEPGESVIPATV--RRMLTDL---FVDDAFRTFVAAGFNGDGSSPDGSSPLLSGRSMEDAC--RDISFVCG-----GTDLEAATAFISRQENELENIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSSSASALAGSDSHTTTAGSSNSIGVPKEDPIE----PYIIELRKASQDGLSPEACRARDERRDRTNAEVADTDIGAVAALQHVAAFSIAQEFGLNRKQRQAFYIFANGLLAQCRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTDDSDGCLS-GAHEGQSTLPASKAAHWKGDVVLAIEEISMISCNLLVRLHNTACSMFPLHKGQPFGNRVVVMLGDFNQLRPIKARSLAHGTALQERRLGMTVTERYGSDLFRMANACVMLHE-SNRFSPSYAPVMERCLYSKCTEDDVKLLNTCVMGASTTRNATSAFDAIIVTFRNKVSTILTAPMMRALCQARGTPLFVARAHDVYVKHQRPGYAEE 2043
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 988 bits (2554), Expect = 0.000e+0 Identity = 545/1086 (50.18%), Postives = 687/1086 (63.26%), Query Frame = 1
Query: 154 SDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLPNKELLTSDKILTDCDALKPLFFNYPGDGTNFLDGLVLAREGFEEEDPYRMRVCSTCLDDMRKNKLPKAAKANGFVLGDFPEELQAASWVEMIAASPVRMSGTVLALEQFKIGQVPGSAKSMMRGTFTFYLQNSYAIGQHLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQEALFPVTDRANSIANARSIHAHGNREPETTVKGNGMDTIED------STTAPFIIETNAVMPSGGDMANVTHYRGTRLRTL------------------------------------------RQDLLVLR----------------------------------------------------------------MCAH-FSKEAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRPAIRALITSMESVHAGASWTTYNKRSTRMKGISFTMQMGQPFFWMTVSPSDTNSPIVLEMAGFKIDVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHGYNDVTASSR-DSAASRPTPDPLVVNAKEGIAQPHQRHVFPVMVSTAATF-DIAFARLMYLDLAELTPGGKLAQVPTDLSQIQP*GLVQIWIRRRRKAFEHETTVLRGPCTFHTNGNMEISRIVYPPGDPTTANGMAEAHAFELAFNSTISELGGDDN-QDANSDRFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYGSGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVER 3063
+DF + S AVC C K C V ++LP+K LL +++ L +C A++ FFNYPGD N LDG VLAR+GF+ + P+ +RVC CL+ + K+K+P+AA ANG LGDFP+ L+ A++VEM+AASPVR+SG VLAL++ K+G V GSAKS+MRGTFTFY+Q++Y + LPAC TD+AGSFTCALVG+KP+ QLR+ FGARR MV LL FQLD+ ++L GVH+LA++AQ S +NL TY +DGSIPKAI +AL PV D N+ ANARS HAHGNREP+ G D T PFIIETNA+MPSG D+A +H + RLRTL Q+ LVL +CA F +EAI+NARWK+ VP+ VA ++ VT +DL A A E+E G+ +S L DRP IR LI +ME VHAGASWT YNKRSTRM ISF MQMGQP FW+T++P+D NSPIV+ +AG ++DVTSRLKAD+P Y ++LR VA + VASA F+H+ I+AVLTCLLRFGA DGDGGVLGRVKGY+GMTEEQ+RL LHCHLLVWVYGYNDF+SFR L+DKTP +Y +LA +L++VIFNQ+ATL+D+N + G V S ++ P PD L+ AKE +A P FP D +A LMYLDLA LT G L + + + + K +T V RG C F T+GNM I+ IVY A A AF AF+++I+ L D+ D SDRF+A +RRL +HIN +NP+IQF IRSNMDLK+LLRDSDAKG+ FYILNY+TKTEQ LDVLLPLL PV ERIR +S G P +E+AVRLVRSCLCKQL+SL+IGGPAAASKVFDLPD +ISH T PC M PLL WA+SRD P + ++R + SD +I++ +GKLTV QR +LLY RC+P+D +P+H MSYVVWH+LVR+ER
Sbjct: 16 TDFGPGTLFRGEKTSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGDHRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQPPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMEFVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRG-----VQPSPEVETDVPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQNLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGPL--DGEVDRVDDSSDXXXXNDSDVEESIIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLER 1094
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 899 bits (2324), Expect = 2.520e-295 Identity = 636/1660 (38.31%), Postives = 826/1660 (49.76%), Query Frame = 1
Query: 13 GPLPFAPVIKERPVLACDHPQGRLDGLDRPLHLMDDVLHPSVLHKCASDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLPNKELLTSDKILTDCDALKPLFFNYPGDGTNFLDGLVLAREGFEEEDPYRMRVCSTCLDDMRKNKLPKAAKANGFVLGDFPEELQAASWVEMIAASPVRMSGTVLALEQFKIGQVPGSAKSMMRGTFTFYLQNSYAIGQHLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQEALFPVTDRANSIANARSIHAHGNREPETTVKGNGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRQDLLVLRMCAHFSKEAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRPAIRALITSMESVHAGASWTTYNKRSTRMKGISFTMQMGQPFFWMTVSPSDTNSPIVLEMAGFKIDVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHGYNDVTASSRDSAASRPTPDPLVVNAKEGIAQPHQRHVFPVMVSTAATFDIAFARLMYLDLAELTPGGKLAQVPTDLSQIQP*GLVQIWIRRRRKAFEHETTVLRGPCTFHTNGNMEISRIVYPPGDPTTANGMAEAHAFELAFNSTISELGGDDNQDANSDRFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQP-ELNNSNINRNGEDGSNSDEEGSDYGSGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYRALPKSSRSAAATTQMIM---PTATSLRKT--RTTLYPKIGS*AVLHVTVTAASVNTAK-IGSRFYVRHQ*W*TSCATSPGGHSGSGSLPTTAVHVFTLFQPRRPQKQRRIVAARPRRVDETNAKERKSSSSLHVNNRP*CRQSYRERNVLRRLRQQPRHGQRRNQRYTTNCRSSPHQDLRRYGVRHIRPCWV*RRR*LTNYSQRFVEQKINERHRTGLVEDNGFLRCVIEKGDGSTRACL*NDELFASNIPS*FNLDITYSNAFCSVRPLRLGPISYSPTVNFIRRFVAISSTCIQRQT*PYQRRSGQNGRRTGSRVSTPRLFLNCSRVWVKPKATAGFLHLRERYACEKDFASFRRVETLHWWWSWSG*KSRTQSNESFHRMPGPRWTNRRRTYARRRFSRKTSCCCRGCNYTFHLPIKCGSIGRKSFG--NHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNLPVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYAPLMDRLLLAKTTYNDVKLFNKRVLDGSSGLHANDCYDGRVIAFRNKVNTVLTLPMMRTWCMANTTPLFIAPAVDELVEDERPGVAKK 4965
GPLPFAP I + PVLACDH +G +DG DRPL+ +DDVL+ SVLH CAS F+ + + SVS A LPN++LLT+D LT+CDA++PLF NYPGD +N L+ LVL REGF+ P+R+R T F LG+FP EL+ A+WVE++AASPVR+SGT++ALEQ K+G+VPGSAKSM AT+ + A++ + P + LL + L T+ ++G A + LFP HG G +D E M + R R R + L + F +EAI NARWK+T + + A+ L ++TPEDL AAAKE+EQG+ WS L +R A+R L+T+MESVHAG+SWT YNKRSTRM IS MQ+GQP +WMT+ P+DT SPI RLRLVA + VASA YHSV +AVLTCLLRF A DGDGGVL RVKGY+GMT+EQRRLMLH H+LVWVYG+NDFSSFR L+DK P+KYNKLARFLE+VIFNQV + A+VNL +HGH + A+S P P E ++ P H FPV D ++ R MYLDLAEL PG +L + + + + K+FE ETTV+RGPCTFHTNG+M I+ + AFN +S + + SDRF+A +R LSTHINPYNPII FLIRSNMDL V+LRDSDA+G+ +Y+L+Y+TK+EQTLDVLLPLLLPVV+RIR+ ++GEP +E AVRLVRSCLCKQLTSLNIGGPAAASKVF LPDAKISH+T PCPMGPLLAWASSRD P E + + +G+ SD G++VS V G+LTVNQ AH+LY +RC+P+D +H LH MSYV W RLVR ERY K+ Q +M P ++ + R+ P+ +L + V + K +G W T+ A +++ + + R +AA DE A YRE + S ++ G E +I G +D+ + V ++G + F D +AF S LR G S + T + + FV + I N RR + R + + P A + ++F R + ++ N F + P F K + G T H C GRK G +HDDQ LT+ QA+ W+G +LA++E SMVGCE+ +AL+KAAC +FPM+KDKPFGN+ VFCGDFNQL R L +++TY+DV FN RVL+G+ GL A DCYDG+VI RNKV T LT+P MRTWC + T LFI+ A DE V DE G K+
Sbjct: 28 GPLPFAPCITKPPVLACDHAEGVVDGHDRPLYAVDDVLNSSVLHHCASRFITKLADSVLSVSCA------------------LPNRDLLTADAKLTNCDAVRPLFSNYPGDNSNLLNSLVLQREGFKSTAPHRLRPKKT------------------FFLGEFPAELKEATWVEVLAASPVRLSGTIIALEQLKVGRVPGSAKSMDN--------------------ATERIRTDRVAVMSTAPMT-----------TTAHCLLKWCL------------------------TFYDEGLFVAAFFD-LFP----------------HG--------IGGHLD------------ERRRYMSFQEWAKILLRQRDPRFRKHKSFLFCV-WALIFRREAIKNARWKLTGRMSRRTAETLATITPEDLAAAAKEMEQGSSVWSALANRNAVRTLLTTMESVHAGSSWTIYNKRSTRMIAISLIMQIGQPLWWMTIGPADTKSPI------------------------RLRLVASDPVASALLYHSVTDAVLTCLLRFDARDGDGGVLERVKGYLGMTKEQRRLMLHFHVLVWVYGFNDFSSFRDLMDKRPEKYNKLARFLERVIFNQVVSFANVNLAMHGHDHTP-------RASSEPEP--------ENVSDP--LHAFPV--ERCFVHDDSYPRFMYLDLAELVPGAQLHRCQPTCHKFNNRDKCRFGYGDKGKSFEQETTVVRGPCTFHTNGSMTINGVD--------------------AFNECVSA-----SSEPESDRFTATLRLLSTHINPYNPIIHFLIRSNMDLNVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLLPVVQRIRDHNEGEPAKETAVRLVRSCLCKQLTSLNIGGPAAASKVFGLPDAKISHTTVPCPMGPLLAWASSRDTPDEEPDDGDSTSGDXXXXXXXXXSDDQHGVVVSVVGGRLTVNQWAHVLYLHRCSPEDTEHALHGMSYVSWTRLVRTERYTPFKKAYNCR----QRVMRQGPVMVNIMRDIPRSDTKPEAHCRLLLCIFVALFELEDLKRVGDS-------WTTAMANVEQHDRWDKRTKPFRLNIAGMLRQR--------IAA-----DEERA--------------------YREEEEA-----------------FVSGSSGQGMEMGSDG-----------------------EDEIILNDLGGDDDDDQSVFLVTKQGI----------------LMQAFVHDA--HDAFVSAG-LR-GNDSQAATRDVMCWFVPVECKSI-------------NARRDRNNQEVARTDIGAAAPSQHPVA----------FRIAQEFGLNREQRLAFYIFA----------NGIFAKKRSPHSPIEEGGMLAVAFQGKQAASVGGT--TIHSV--CNVPGRKGSGGKDHDDQKGLTEDQALSWEGKSVLAVKEASMVGCEMELALDKAACKVFPMHKDKPFGNMVAVFCGDFNQL---------------------------------------------------------RFLHSRSTYSDVIKFNTRVLNGTPGLSAADCYDGKVITLRNKVTTALTMPTMRTWCQSRGTTLFISSATDEFVGDEGGGRPKE 1292
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: A0A6H5J5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A5_9PHAE) HSP 1 Score: 865 bits (2234), Expect = 1.800e-287 Identity = 501/1034 (48.45%), Postives = 613/1034 (59.28%), Query Frame = 1
Query: 10 KGPLPFAPVIKERPVLACDHPQGRLDGLDRPLHLMDDVLHPSVLHKCASDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLPNKELLTSDKILTDCDALKPLFFNYPGDGTNFLDGLVLAREGFEEEDPYRMRVCSTCLDDMRKNKLPKAAKANGFVLGDFPEELQAASWVEMIAASPVRMSGTVLALEQFKIGQVPGSAKSMMRGTFTFYLQNSYAIGQHLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQEALFPVTDRANSIANARSIHAHGNREPETTVKG---------------------NGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRQDL-----------------LVLRMCAH-FSKEAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRPAIRALITSMESVHAGASWTTYNKRSTRMKGISFTMQMGQPFFWMTVSPSDTNSPIVLEMAGFKIDVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHGYNDVTASSRDSAASRPTPDPLVVNAKEGIAQPHQRHVFPVM-VSTAATFDIAFARLMYLDLAELTPGGKLAQVPTDLSQIQP*GLVQIWIRRRRKAFEHETTVLRGPCTFHTNGNMEISRIVYPPGDPTTANGMAEAHAFELAFNSTISELGGDDNQDANSDRFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQP-ELNNSNINRNGEDGSNSDEEGSDYGSGMIVSAVEGKLTVNQRAHLLYRNRC 2988
+GPLPFAP I E PVLACDH +G +DG DR L+ +DDVL+ SVLH CAS F+ + + SVS VC +C ++DC ++A LPN++LLT+D LT+CDA++PLFF Y GD +N L+GLVL REGFE P+R+RVCS L D+RKNK PKAAKAN F LGDFP EL+ A+WVEM+AA PVR+SGT++ALEQ K S C + SE NL+ Y EDGS P+AIQ+AL VTDR N++A ARS HAHGNREPE V G NG D +D P + ET AVMPSG D+A + YR TRLR L+ +L + +C F +EAI NARWK+T V + A+ L ++TPEDL AA KE+EQG+ AWS L +R A+R L+T+MESVHAG+SWT YNK + VASA +YHSV +AVLT LLR A DGDGGVLGRVKGY+GMTEEQRR+MLH H++VWVYG+N+FSSFR L+DK P+KY KLARFLE+VIFNQVA+ ADVNL +HGH D T + DPLV AKE +AQP FP V D ++ARLMYLDLAEL PG +L + + + + K+ E ETT+ RGPCTFHTNG M IS +VYPPGDP+TA M A AF+ AFN +S + SDRF+A +RRLSTHINPYNPII FLIRSNMD KV+LRDSDA+G+ +Y+L+Y+TK+EQTLDVLLPLL VV+R R E +GEP +E AVRLVRSCLCKQLTSLNI GPAAASKVF LPDAKISH+T+PC M P LAWA SRD P E + + +G+ SD G++VS V G+LTVNQRAH+LY +RC
Sbjct: 18 RGPLPFAPYITEPPVLACDHAEGVVDGHDRLLYAVDDVLNSSVLHHCASRFITKLADSDSSVS--VCDCMCKEKDCELLSAGELPNRDLLTADAKLTNCDAVRPLFFTYLGDNSNLLNGLVLQREGFESTAPHRLRVCSIRLADLRKNKCPKAAKANVFFLGDFPAELKEATWVEMLAAGPVRLSGTIIALEQLK---------------------------------------SVVCLV-----------------------------------------------SEANLQGYPEDGSTPQAIQDALISVTDRRNTVAAARSTHAHGNREPEQPVGGTSGSDGQRDGEDSDRQGSGDVNG-DDDDDGVLPPCVNETKAVMPSGSDLAKSSQYRPTRLRALQAELSLSDSTGPASLAQKHKSFLFFVCVLIFRREAIKNARWKLTGRVSRRTAETLATITPEDLAAAGKEMEQGSSAWSALANRNAVRTLLTTMESVHAGSSWTIYNK-------------------------------------------------------------SERSVASALYYHSVTDAVLTWLLRVDARDGDGGVLGRVKGYLGMTEEQRRVMLHSHVVVWVYGFNEFSSFRDLMDKRPEKY-KLARFLERVIFNQVASFADVNLAMHGH---DHTPRASSELEPENVSDPLVRPAKERMAQPPSPACFPRQGVKRCPVHDDSYARLMYLDLAELVPGAQLHRCQPTCHKFNNRNKCRFRYGDKAKSLEQETTLFRGPCTFHTNGGMTISGVVYPPGDPSTAESMVAAQAFQNAFNECVSVAS-----EPESDRFTATVRRLSTHINPYNPIIHFLIRSNMDSKVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLFLVVQRKRCEKEGEPAKETAVRLVRSCLCKQLTSLNIDGPAAASKVFGLPDAKISHTTAPCSMRPSLAWAPSRDAPDEEPDDGDSTSGDXXXXXXXXASDDQHGVVVSVVGGRLTVNQRAHVLYLHRC 892
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 778 bits (2009), Expect = 1.300e-236 Identity = 473/1156 (40.92%), Postives = 623/1156 (53.89%), Query Frame = 1
Query: 25 FAPVIKERPVLACDHPQGRLDGLDRPLHLMDDVLHPSVLHKCASDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLPNKELLTSDKILTDCDALKPLFFNYPGDGTNFLDGLVLAREGFEEEDPYRMRVCSTCLDDMRKNKLPKAAKANGFVLGDFPEELQAASWVEMIAASPVRMSGTVLALEQFKIGQVPGSAKSMMRGTFTFYLQNSYAIGQHLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQEALFPVTDRANSIANARSIHAHGNREPETTVKG--NGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRQDL-------------------------------------------------------LVL---------------RMCAHFS--------------------------------------------------KEAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRPAIRALITSMESVHAGASWTTYNKRSTRMKGISFTMQMGQPFFWMTVSPSDTNSPIVLEMAGFKIDVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHGYNDVTASSRDSAASRPTPDPLVVNAKEGIAQPHQRHVFPVM-VSTAATFDIAFARLMYLDLAELTPGGKLAQVPTDLSQIQP*GLVQIWIRRRRKAFEHETTVLRGPCTFHTNGNMEISRIVYPPGDPTTANGMAEAHAFELAFNSTISELGGDDNQDAN---------SDRFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQ--PELNNSNINRNGEDGSNSDEEGSDYGSGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYRALPKSSR 3090
+AP + E PV A +HP+GR DG DRP L DVL S+L KC +DF ++ HSVS AVC L+C + DC WV+A LPN+ LLT+ L D++ +YPGD LDGLVLAREGFE +R+RVCS CL D+ NK P A ANG +GDFPE L+ ++WVEM AASPVR SG V ALEQ K+G +PGSA MMRGTFTF+ QN+Y + + LP C TD+AGS TCALVG++PT QLR+ GARRS ++ L+DFQ D ++LAG H L + AQTS +NL T+ +DGS+P I ++L P D + A S + NR+PET V +D FII+ AV+PSG + A + R RLRTL+ DL LVL + A+F +EAI+NA WK+T V + VAQ+L +TP+DL A A+EIE GT L +RPA R LI +M+SV+ ASWT +NKR+ RMK IS +Q+GQP FWMT++P+D+NSP+V+++AG +DV+SRLK D P Y +RL+L+A + VASA F+H +I+AV+ LLRFGA DGDGGVLGRVK Y+GMTEEQRRL LHCHLLVWVY +LA FL + IF+QVA+ DV + G +++ + P+ DPL A E IA P FP V D + + +LAE+T + Q + + + K E T V RG + NG+ + ++Y A A+A A A + D++ D + ++RF+A RR +N YN II F RSNMD+K LLRDSDA+G FYILNY+TKTE T+D LL +L PVVERI++E++G P A +LVR+C CK + + +G PAAASKV + DAK + CPM PLLA AS+ P SN N + DY SG I++ GK+ ++ H LY RC P+D +HP H M Y VW RLVR+E K +R
Sbjct: 2172 YAPTVTETPVTAFNHPEGRSDGHDRPA-LTKDVLGTSMLFKCIADFHTYMADNIHSVSCAVCDLMCRRIDCEWVSANELPNRSLLTAGPHLKAHDSIMNDMKDYPGDTNKCLDGLVLAREGFESGPLHRLRVCSECLRDLNSNKTPYATLANGLWVGDFPEHLKDSTWVEMAAASPVRTSGMVFALEQLKVGAIPGSAHRMMRGTFTFFFQNAYGVEKVLPTCDTDIAGSMTCALVGARPTEAQLRKLLGARRSRIQELMDFQRDEQNQLAGEHVLFKRAQTSVENLDTFPQDGSVPPRILDSLIPAVDASRLREKASSSYVRDNRQPETPVDDADEAVDGQNADDNPAFIIDNCAVIPSGREQAVSSESRPERLRTLQTDLINSAGTAAPTAMDVEEDDAQAAGSTPSXXXXXXXXXXXXXXXXXXXXXXEQTKNMLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAARQLIRTMQSVNGDASWTMFNKRTLRMKAISMIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWVY-------------------QELASFLSRTIFSQVASDEDVQHAMTG---GIEPSNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAA---AKEEEEIQKFADESDDVSRGKLDFATVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLEYTDAKSAPDARTCPMKPLLALASASFDALPPAEGSNENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENTPRKQKPAR 3301
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE) HSP 1 Score: 352 bits (902), Expect = 4.950e-98 Identity = 218/641 (34.01%), Postives = 326/641 (50.86%), Query Frame = 1
Query: 34 VIKERPVLACDHPQGRLDGLDRPLHLMDDVLHPSVLHKCASDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLPNKELLTSDKILTDCDALKPLFFNYPGDGTNFLDGLVLAREGFEEEDPYRMRVCSTCLDDMRKNKLPKAAKANGFVLGDFPEELQAASWVEMIAASPVRMSGTVLALEQFKIGQVPGSAKSMMRGTFTFYLQNSYAIGQHLPACATDVAGSFTCALVGSK-PTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQEALFPVTDRANSIANARSIHAHGNREPETTVKGNGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRQDLLVLRMCAHFSKEAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRPAIRALITSMESVHAGASWTTYNKRSTRMKGISFTMQMGQPFFWMTVSPSDTNSPIVLEMAGFKIDVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHG---YNDV 1944
+ +E P A + +G+ D ++LM + ++LH+ F H+ S AVC L R ++A +PNK+LL +D+ L + + F Y GD LD LVL++ G E E+PY++ VC C + +N++ G P+ELQ A++VE AA P+R G V+ALE ++ +PG+AK MRGT FY NS ++ LP AT + T L G K P L R GAR+SM+R ++D+ LD ++L A+ SE+N+ +Y+E+G+IPK + + + N R + +R R L F EAI N R+K++ + A + S+T E L A A+E++ G + N+RP IR+L+ +M++V A+WT + K R S +M GQPFFWMTV+PSD NSP V+ G ID++S PD+ +RL ++ + VASA F+H IEAVL +LRF A GDGG LG +K YIGMTEEQ RLMLH HL+VWV+G+ R + + KK+ +LA+++ ++I+NQV ++ +V L YN+V
Sbjct: 21 LFREIPTAAIETTEGQETCRDS-VNLMTPLRAETLLHELQG-FRDHMFAGSTRSPCAVCDRLTLVRRHHVISAREIPNKQLLRADEALRKHERVMATFRGYAGDTERELDTLVLSKFGIESEEPYKIHVCDECYRWLARNRV-----------GTLPDELQKATFVERAAAYPIRTKGHVVALESRRVNNIPGTAKRSMRGTSVFYANNSSSVATELPLAATGLLDMITVVLAGKKKPKTSDLGRLLGARKSMIRDIIDYMLDNEEKLVVGFPRAKSLPISEENIDSYSENGAIPKVLWIQI---------LLNRRD----------------------------------------------SSWRIDRC------FLFCAAAIRFRHEAIANMRFKLSVQPNSANADAIASITKEHLHAMAEELKSGKKTSAAFNNRPEIRSLLRTMQAVSGDATWTDHGKHRARTTAHSMSMLFGQPFFWMTVNPSDLNSPFVMHYGGHDIDLSSTCHEQMPDFRKRLDIIVNDPVASAIFFHGTIEAVLKYILRFQANYGDGGALGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTSREQLRQGVGYSLKKHAELAKYIGRIIYNQVMSVEEVEFGLFNQSEPVYNNV 587
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE) HSP 1 Score: 271 bits (694), Expect = 1.150e-70 Identity = 310/1085 (28.57%), Postives = 454/1085 (41.84%), Query Frame = 1
Query: 1822 LDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHGYNDVTASSRDSAASRPTPDPLVVNAKEGIAQPHQRHVFPVM-VSTAATFDIAFARLMYLDLAELTPGGKLAQVPTDLSQIQP*GLVQIWIRRRRKAFEHETTVLRGPCTFHTNGNMEISRIVYPPGDPTTANGMAEAHAFELAFNSTISELGGDDNQDAN---------SDRFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQ--PELNNSNINRNGEDGSNSDEEGSDYGSGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYRALPKSSRSAAATTQM------------IMPTATSLRKTRTTLYPK---IGS*AVLHVTVTAASVNTAKIGSRFYVRHQ*W*TSCATSPGGHSGSGSLPTTAVHVFTLFQPRRPQKQRRIVAARPRRVDETNAKERKSSSSLHVNNRP*CRQSY------RERNVLRRLRQQPRHGQRRNQRYTTNCRSSPHQDLRRYGVRHIRPCWV*RRR*LTNYSQRFVEQKINERHRTGLVEDNGFLRCVIEKG--------DGSTRACL*NDELFASNIPS*FNLDITYSNAFCS------VRPLRL---GPISYSPTVNFIRRFV----AISSTCIQRQT*PYQ-----RRSGQNGRRTGSRVSTPRLFLNCSRVWVK----PKATAGFLHLRERYACEKDFASFRRVETLHWWWSWSG*KSRTQSNESFHRMPGPRWTNRRRTYARRRFSRKTSCCCRGCNYTFHLPIKCGSIGRKS----FGNHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNLPVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYAPLMDRLLLAKTTYNDVKLFNKRVL-------DGS-SGLHANDCYDGRVIAFRNKVNT 4851
+DKTP Y +LA FL + IF+QVA+ DV + G +++ + P+ DPL A E IA P FP V D + + +LAE+T + Q + + + K E T V RG + NG+ + ++Y A A+A A A + D++ D + ++RF+A RR +N YN II F RSNMD+K LLRDSDA+G FYILNY+TKTE T+D LL +L PVVERI++E++G P A +LVR+C CK + + +G PAAASKV DAK + CPM PLLA AS+ P SN N + DY SG I++ GK+ ++ H LY RC P+D +HP H M Y VW RLVR+E K +R + RK L + +G V VT I R + T P H+ L F + R P + VA R R +E+ +++S+S + +N + RQ + R +VL+ LR++ G + + D G + P R ++ Y V++ ++ +++ + + G D S A L E A+ D+ + + + +R LR +S RR A++ T + R + P Q R + + G R++ F W+ P A LH+ K + R + L K Q PG T F K + N + + RK+ N Q+ L++ +A W LAIEEVSMV C L +L+KAA S+ P + PF + V GD NQL+PV A S+ GA+ + K+ + G F NA V+LD+ +NRFS TYAP+MDR+L +T DV+ FN R L DG+ + L C+ + I FRNK +
Sbjct: 1 MDKTPDSYQELASFLSRTIFSQVASDEDVQHAMTG---GIEPSNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAA---AKEEEEIQKFADESDDVSRGKLDFATVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLGYTDAKSAPDARTCPMKPLLALASASFDALPPAEGSNENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIENTPRKQKPARRPNDDNDRESGXXXXXXXXXXXXXXAARRKRGRPLAKRHDFVGLPTVHKQQVTREEPILINI-MRDVPKQD-------TQPENHAQL--LLCLYKPFFKIHDLRLPDEASWAVALR--RTEESGLWDQRSTS-MRINIKGMLRQRHAADEENRASSVLQSLRRRRPLGACGGADIDGDIFGADVDDTDPAGPNVMPPARNAHR--VSAYVNNAVDRCLDAGF--SRTDNDRLPQAALLSGRSSHQIAADASKDALLKTRETEAATAVPDDAPDVAATKPYNADALSPYLRDLRSKSEAGLSKDAKDRMDRRRKETNEAVAKTDVGRSS-PQQHDAVRRIADEFGLNRKQRLA----FFIFGAAWIARDGVPTPNALRLHVSGGAGSGKSYV-LRAIVALI---DCPALKGVVQ--------PGGLLTVA--------FQGKAAA-----NVGGNTVHSVADVPRKNNDGAMDNTIGQTGLSEAKAARWTHAAALAIEEVSMVSCLQLGSLHKAAVSVRPSSASLPFAGMIYVTFGDLNQLAPVSAKSVVFGATDSSELHKMTHTERIGHSNFWAANAAVVLDETNNRFSATYAPVMDRVLRRVSTVTDVEAFNARTLGSFSRLPDGTLAKLSMKHCWMAQTITFRNKATS 1032 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8965.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8965.1.1 >prot_A-nodosum_M_contig8965.1.1 ID=prot_A-nodosum_M_contig8965.1.1|Name=mRNA_A-nodosum_M_contig8965.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=689bp MDDVLHPSVLHKCASDFVAHVVGASHSVSSAVCGLLCTKRDCMWVTAENLback to top mRNA from alignment at A-nodosum_M_contig8965:2490..8989+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8965.1.1 ID=mRNA_A-nodosum_M_contig8965.1.1|Name=mRNA_A-nodosum_M_contig8965.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6500bp|location=Sequence derived from alignment at A-nodosum_M_contig8965:2490..8989+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8965:2490..8989+ >mRNA_A-nodosum_M_contig8965.1.1 ID=mRNA_A-nodosum_M_contig8965.1.1|Name=mRNA_A-nodosum_M_contig8965.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2067bp|location=Sequence derived from alignment at A-nodosum_M_contig8965:2490..8989+ (Ascophyllum nodosum dioecious)back to top |