mRNA_A-nodosum_M_contig894.21.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig894.21.1
Unique NamemRNA_A-nodosum_M_contig894.21.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: D7G4M9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M9_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 6.620e-120
Identity = 197/289 (68.17%), Postives = 221/289 (76.47%), Query Frame = 3 
Query:  141 MVRVGFLCVVAAASADVSTGFVAPVSPAKGLIGSPRLSLSALNRGSALERAVVSQKGSRSRR-----RPLGLQMQEDG--SMIGGGFNLSGEAPFEIRGFSLANLALLIGVGITGASFYEYFTSGGSAGLSGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTTLPPGVSPTPK 986
            MVRVG  CVVAAA+ADV T FVAPV  A                                       + L LQMQ DG     GGG N+SGEAPFEIRGFSLAN A L G+ IT ASFYEYF++GG+ GLSG+GFVYGIPI+LIGLALKYAEL PAPLQT+PEA+ALFE+KAT+T+R++K DVTRHRYGDEAHLDTTVKFLGLVMP+ DYPQLQ+I QT+EPNGELGF+MV+QSK TPFKRWVEPERV+KYV+FFGPGVDAEVIKVDA E+LVAIKLTTLPPG  PTPK
Sbjct:    1 MVRVGHFCVVAAAAADVCTAFVAPVGQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLALQMQSDGPSQWAGGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALKYAELPPAPLQTTPEAEALFEEKATETIRSIKSDVTRHRYGDEAHLDTTVKFLGLVMPQSDYPQLQYISQTIEPNGELGFTMVFQSKMTPFKRWVEPERVEKYVAFFGPGVDAEVIKVDAQEKLVAIKLTTLPPGAQPTPK 289
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BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: A0A835YHW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW7_9STRA)

HSP 1 Score: 274 bits (700), Expect = 6.290e-84
Identity = 149/237 (62.87%), Postives = 177/237 (74.68%), Query Frame = 3 
Query:  372 GGFNLSGEAPFEIRGFSLANLALLIGVGITGASFYEYFTSGGSAGLSGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTTLPPGVSPTPKAAXXXXXXXXXXXXXXXAEVVAATPVTETEEA 1082
            GG N+SGEAPFEIRGFSL N  L+ GV IT ASF EYFTSGG AGLSG+GFVYGIP++LIGLALKYAEL P  + ++P A ALFE+KAT+TMR +KKDVTRHRYGDEAHLD+TVK LGLV+P+ DYPQLQ + + V PNGEL FSM++ S  TPFK WV+P RV+KY +FFGPGV A V KV ++ RLVAIKLTT+ P  +PT + +               A   AA PV E E+A
Sbjct:   77 GGINVSGEAPFEIRGFSLGNAFLIGGVVITTASFAEYFTSGG-AGLSGLGFVYGIPVALIGLALKYAELAPVGVSSTPAAAALFEEKATETMRKIKKDVTRHRYGDEAHLDSTVKALGLVLPQSDYPQLQGLKEEVAPNGELAFSMIFSSPETPFKMWVDPARVRKYTTFFGPGVTASVEKVSSEARLVAIKLTTVNPD-APTEEPS---------------AAAAAAVPVPEEEKA 296
[Close]
BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: A0A7S2V4E2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4E2_9STRA)

HSP 1 Score: 270 bits (689), Expect = 2.500e-83
Identity = 136/217 (62.67%), Postives = 173/217 (79.72%), Query Frame = 3 
Query:  351 EDGSMIGGGFNLSGEAPFEIRGFSLANLALLIGVGITGASFYEYFTSGGSAGLSGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTT----LPPGVSPTPKA 989
            E  ++  GG NLSGE PFEIRGFSL +  L +GV +T  SF E+F S GS GLSG+GFVYGIPI+L+GL+LKYAEL P P++T+PEA+ALFE+KAT+T++ +K DVTRHRYGDEAHL++TVK LGLVMP+ +YPQLQW+ + VE +GE  FSMV+QSK TPFK W EP ++ K+ +FFGPGV+AEV+KV+  ERLVAIKLTT    +PP  + T +A
Sbjct:    1 EGNTITSGGINLSGEPPFEIRGFSLGDAFLGVGVAVTAISFTEFFMSAGSEGLSGIGFVYGIPIALVGLSLKYAELAPVPVRTTPEAEALFEEKATETIKKIKSDVTRHRYGDEAHLESTVKALGLVMPQSEYPQLQWLDEGVE-DGEYTFSMVFQSKETPFKVWNEPAKIPKFETFFGPGVNAEVVKVNGAERLVAIKLTTGEKKVPPAATETEEA 216
[Close]
BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: A0A7S2UH94_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UH94_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.710e-75
Identity = 131/211 (62.09%), Postives = 156/211 (73.93%), Query Frame = 3 
Query:  360 SMIGG-GFNLSGEAPFEIRGFSLANLALLIGVGITGASFYEYFTSG---GSAGLSGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTTLPPGVSPT 980
            +MIGG G N +GE PFEIRGFSL NL + +GV IT  SF EY   G   G  G+SG+GFVYGIP+ L G ALKYAE+EP PL +S E+  LFE K T+ M  +KKDVTRHRYGDEAHLDTTVK LGLV+P   YPQLQ + Q   P+GEL F+MVWQS  TP+K W +  RV+KY +FFGPGV AEV+K+DA++RLV IKLTT P   +PT
Sbjct:   78 AMIGGAGVNNAGEPPFEIRGFSLGNLVIALGVAITVLSFTEYLGDGSGDGGLGVSGLGFVYGIPVFLAGAALKYAEIEPVPLFSSDESQTLFEAKKTEVMDKIKKDVTRHRYGDEAHLDTTVKRLGLVVPGKAYPQLQELRQETTPDGELAFTMVWQSLDTPYKMWADERRVKKYDTFFGPGVTAEVLKIDAEQRLVGIKLTTGPKPTTPT 288
[Close]
BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: A0A7R9UF83_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF83_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.240e-74
Identity = 119/195 (61.03%), Postives = 158/195 (81.03%), Query Frame = 3 
Query:  372 GGFNLSGEAPFEIRGFSLANLALLIGVGITGASFYEYFTSGGSAGLSGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTT 956
            GG N SG+ PFEIRGFSLA L L  G  +T  SF EYF+ GG +G+SG+GFVYGIP+ LIGL+LKYAE+ P  + T+P AD  FEKKAT+T++ +K+DVTRHRYGD+AHLD+T+K LGL +P+ D+P+L+++ Q V PNGEL FSMV++S  TP++ W EP+R+++Y +FFGPGV+AEV K+ ++ERLVAIKLTT
Sbjct:   55 GGINTSGKPPFEIRGFSLATLFLGGGFLLTVGSFAEYFSEGGGSGVSGLGFVYGIPVLLIGLSLKYAEIPPVEVVTTPAADDAFEKKATETIKQIKQDVTRHRYGDDAHLDSTLKALGLQLPQKDFPELEYLKQDVAPNGELAFSMVFRSMETPYRMWAEPDRIKRYETFFGPGVNAEVEKISSEERLVAIKLTT 249
[Close]
BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: A0A7S1ZC13_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZC13_9STRA)

HSP 1 Score: 247 bits (630), Expect = 9.050e-74
Identity = 125/202 (61.88%), Postives = 156/202 (77.23%), Query Frame = 3 
Query:  360 SMIGG-GFNLSGEAPFEIRGFSLANLALLIGVGITGASFYEYFTSGGSAGL--SGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTT 956
            +MIGG G N +GE PFEIRGFSL NL +L GV +T ASF EY +  G  GL  SG+GFVYGIPI L G ALKYAE+EP P  ++P+ + +FE KATD ++ +K+DVTRHRYGDEAHLDTTVK LGLV+P  DYPQLQ + + +  +GEL F+MVWQS  TPFK W + +R +KY +FFGPGV AEV+K+DA++RLV I+LTT
Sbjct:   65 AMIGGAGVNNAGEPPFEIRGFSLGNLVILAGVVVTFASFAEYLSESGGDGLNVSGLGFVYGIPIFLAGAALKYAEIEPVPCYSTPDGERIFESKATDIIQKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKDYPQLQELREEMTEDGELAFTMVWQSYDTPFKLWADEKRRKKYETFFGPGVGAEVVKIDAEQRLVGIRLTT 266
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BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: A0A4D9DHB4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHB4_9STRA)

HSP 1 Score: 244 bits (624), Expect = 8.680e-73
Identity = 126/196 (64.29%), Postives = 157/196 (80.10%), Query Frame = 3 
Query:  372 GGFNLSG-EAPFEIRGFSLANLALLIGVGITGASFYEYFTSGGSAGLSGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTT 956
            GG N+ G + PFE+RGFSLA +AL +G  IT  S  EY  S GS GLSGVGFVYGIPI LIGL+L+YA+L P P+Q++PEAD LFE+K+T T++ +KKDVTRHRYGD+AHLDTTV+ LGLVMP  ++PQLQ++ Q VE NGEL F+MV++S  TP++ WVEPER+ +Y +FFGPGV A V KVDA+ RLVAIKL T
Sbjct:   69 GGDNMVGTDVPFELRGFSLATVALGVGALITIGSLAEYLISSGSEGLSGVGFVYGIPILLIGLSLQYAQLNPVPVQSTPEADRLFEQKSTPTIQKIKKDVTRHRYGDDAHLDTTVQALGLVMPNKEFPQLQYLTQGVE-NGELAFTMVFKSDDTPYRLWVEPERISRYETFFGPGVWATVEKVDAERRLVAIKLVT 263
[Close]
BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: A0A7S2KAK2_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAK2_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.240e-72
Identity = 124/202 (61.39%), Postives = 153/202 (75.74%), Query Frame = 3 
Query:  360 SMIGG-GFNLSGEAPFEIRGFSLANLALLIGVGITGASFYEYFTSGGSAGL--SGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTT 956
            +MIGG G N +GE PFEIRGFSL NL +  G+ IT  SF EY    G  GL  SG+GFVYGIP+ L G ALKYAE+ P P  ++P+AD++FE KAT+ +R VK+DVTRHRYGDEAHLDTTVK LGLV+P   YPQL+ + Q V  +GEL FS+VWQS  TP+K W + +RV KY +FFGPGV A+ +K+DAD+RLVAI+LTT
Sbjct:   57 AMIGGAGVNNAGEPPFEIRGFSLGNLVIFAGLAITVLSFSEYLGDSGGEGLNVSGLGFVYGIPVFLAGAALKYAEINPVPCYSTPQADSIFESKATEIIRKVKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLKELRQDVTEDGELAFSIVWQSLDTPYKMWADQKRVNKYSTFFGPGVYADCVKIDADQRLVAIRLTT 258
[Close]
BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: A0A8J9X6Z0_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X6Z0_PHATR)

HSP 1 Score: 241 bits (615), Expect = 3.710e-72
Identity = 124/202 (61.39%), Postives = 153/202 (75.74%), Query Frame = 3 
Query:  360 SMIGG-GFNLSGEAPFEIRGFSLANLALLIGVGITGASFYEYFTSGGSAGL--SGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTT 956
            +MIGG G N +GE PFEIRGFSL NL +  G+ IT ASF EY +  G  GL  SG+GFVYGIP+ L G ALKYAE+ P P+ T+P A+ +F++KATDT+  +K+DVTRHRYGDEAHLDTTVK LGLV+P   YPQLQ + Q    +GEL F+MVWQS  TP+K W +P RV KY  FFGPGV A+V+K+DA++RLV I+LTT
Sbjct:    8 AMIGGAGVNNAGEPPFEIRGFSLGNLVVGAGILITFASFAEYLSESGGDGLNVSGLGFVYGIPVFLAGAALKYAEINPVPVATTPAAERVFDRKATDTILKIKQDVTRHRYGDEAHLDTTVKKLGLVVPGKAYPQLQELRQDEVNDGELAFTMVWQSVDTPYKMWADPRRVLKYEKFFGPGVYADVVKIDAEQRLVGIRLTT 209
[Close]
BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Match: A0A7S1U5M2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5M2_9STRA)

HSP 1 Score: 242 bits (618), Expect = 4.410e-72
Identity = 121/212 (57.08%), Postives = 159/212 (75.00%), Query Frame = 3 
Query:  372 GGFNLSGEAPFEIRGFSLANLALLIGVGITGASFYEYFTSGGSAGLSGVGFVYGIPISLIGLALKYAELEPAPLQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPRGDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGPGVDAEVIKVDADERLVAIKLTT-----LPPGVSPTPKAA 992
            GG N SGE PFEIRGFSLA   L+ G  +T ASF EYF  GG AGL G+GFVYGIP+ LIGL+LKYAEL P  + ++P+ +A FE KAT+T++ +K+DVTRHRYGD+AHLD+T+K LGL +P+ ++P L+++ +     GEL FSMV++S  TP+K W E +RV++Y +FFGPG++AEV+KV+A+ERLVAIKLTT      P    P PK A
Sbjct:   59 GGINTSGEPPFEIRGFSLATSFLVGGFVLTVASFGEYFAEGGGAGLGGIGFVYGIPVLLIGLSLKYAELAPVEVVSTPQGEAAFEAKATETLKKIKQDVTRHRYGDDAHLDSTLKSLGLQLPQKEFPTLEYLQEETTNEGELAFSMVFRSPETPYKIWAEEDRVKRYETFFGPGLNAEVVKVNAEERLVAIKLTTGEKPAEPKAAEPAPKEA 270
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig894.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M9_ECTSI6.620e-12068.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHW7_9STRA6.290e-8462.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V4E2_9STRA2.500e-8362.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UH94_9STRA2.710e-7562.09Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7R9UF83_9STRA1.240e-7461.03Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1ZC13_9STRA9.050e-7461.88Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A4D9DHB4_9STRA8.680e-7364.29Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2KAK2_9STRA2.240e-7261.39Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A8J9X6Z0_PHATR3.710e-7261.39Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]
A0A7S1U5M2_9STRA4.410e-7257.08Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig894contigA-nodosum_M_contig894:252271..258356 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G4M9
PFAMsDUF2854
Model size1854
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons6
Evalue2.1e-124
EggNOG OGs28IHE@1|root,2QQU9@2759|Eukaryota
Ec32 ortholog descriptionProtein of unknown function DUF2854
Ec32 orthologEc-00_007720.1
DescriptionProtein of unknown function (DUF2854)
Cds size966
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig894.21.1prot_A-nodosum_M_contig894.21.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig894 252411..257608 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870322.2020812-UTR-A-nodosum_M_contig894:252270..2524101680870322.2020812-UTR-A-nodosum_M_contig894:252270..252410Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig894 252271..252410 +
1680870322.3650334-UTR-A-nodosum_M_contig894:257608..2583561680870322.3650334-UTR-A-nodosum_M_contig894:257608..258356Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig894 257609..258356 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870322.2171044-CDS-A-nodosum_M_contig894:252410..2526141680870322.2171044-CDS-A-nodosum_M_contig894:252410..252614Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 252411..252614 +
1680870322.302898-CDS-A-nodosum_M_contig894:253584..2538061680870322.302898-CDS-A-nodosum_M_contig894:253584..253806Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 253585..253806 +
1680870322.3149793-CDS-A-nodosum_M_contig894:255806..2558811680870322.3149793-CDS-A-nodosum_M_contig894:255806..255881Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 255807..255881 +
1680870322.3269165-CDS-A-nodosum_M_contig894:256191..2563231680870322.3269165-CDS-A-nodosum_M_contig894:256191..256323Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 256192..256323 +
1680870322.338065-CDS-A-nodosum_M_contig894:256956..2570881680870322.338065-CDS-A-nodosum_M_contig894:256956..257088Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 256957..257088 +
1680870322.351874-CDS-A-nodosum_M_contig894:257407..2576081680870322.351874-CDS-A-nodosum_M_contig894:257407..257608Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig894 257408..257608 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig894.21.1

>prot_A-nodosum_M_contig894.21.1 ID=prot_A-nodosum_M_contig894.21.1|Name=mRNA_A-nodosum_M_contig894.21.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=322bp
MVRVGFLCVVAAASADVSTGFVAPVSPAKGLIGSPRLSLSALNRGSALER
AVVSQKGSRSRRRPLGLQMQEDGSMIGGGFNLSGEAPFEIRGFSLANLAL
LIGVGITGASFYEYFTSGGSAGLSGVGFVYGIPISLIGLALKYAELEPAP
LQTSPEADALFEKKATDTMRTVKKDVTRHRYGDEAHLDTTVKFLGLVMPR
GDYPQLQWIMQTVEPNGELGFSMVWQSKSTPFKRWVEPERVQKYVSFFGP
GVDAEVIKVDADERLVAIKLTTLPPGVSPTPKAAPPPPSAKEEPKAAEAA
EVVAATPVTETEEAASPAAEA*
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mRNA from alignment at A-nodosum_M_contig894:252271..258356+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig894.21.1 ID=mRNA_A-nodosum_M_contig894.21.1|Name=mRNA_A-nodosum_M_contig894.21.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6086bp|location=Sequence derived from alignment at A-nodosum_M_contig894:252271..258356+ (Ascophyllum nodosum dioecious)
CCTGTGTAATCGCATCTCCTTAGACGCCATCGCTCAAGCTACCTCTTCTC
TCGAGAGTATCTACAGTACCACTCCGGGCATCTAGGAGCAGACCTATAGA
ACAACTAGCAAGTTATAAAATACACTTAGAAGCTCGAAGGATGGTTCGTG
TCGGGTTTCTTTGTGTCGTGGCCGCTGCCAGCGCTGACGTTTCCACGGGC
TTTGTCGCACCCGTCTCGCCGGCTAAAGGTTTAATCGGCTCTCCACGACT
CTCCTTGTCGGCTTTGAACCGGGGGTCAGCATTAGAGCGGGCCGTGGTAT
CCCAGAAAGGAAGCCGGTCACGCCGCCGGCCGCTTGGTCTTCAGGTATGC
TTACTGGGGATGTAGAAGCTTGGGAGTCGAAATGTCTGCAACCACTGTTG
TAATTGTATACCTGGTACAGAGTACGTACTTTTTAGCTCCGATGACATCA
TCGACGGCTTTTTGCATGTTTCCGACAAACGTAGGCAATCATGAGGCATG
GTCGACGCATGTTAAGGTACAAGCAGCTATTAACTGCTGTTGCACCTTCC
AAGTACTATCAGTGAGCGAGTCTATGCCGCCACCCCATACAGACATAGTA
AATAAATTTCTCGTAGGACGACGGGTGTAGCCTCCACACAGCAATGTAGA
AGTAGACACTCATGACCAGTACTATTTTGTACCGGTACCTGGTACATGAA
AATTTGAACGCCCTGAAAAGATTTTACTCTGCCCTCACCTGTCTTTCCAT
TTGAAACCTATTATTGATCGGTACTGTACCCGTTGCCGTTGCTCTTGATA
TTATCTTGATACTACAGTATATAGGATGAAAAACGAATCAAGTACGCGCT
CTGCTATGCAGCAGTTTTGCGCACTCTGCTGTGCAGCAGTTTTGCGGTTT
TTGATACCGCACAGTTAGCTTCTGGTCCTGCTGGTCCAGCATGATCCATC
CTACTGTAGTGGTAGACTATTCAGCAGAATGAAGGACAAAGGTCGGAGAA
GCAACCTATAGAGCTCTAATACTACTGGTTTGTCTACTCAAATACAGTAG
CTCTAGATAGAAAAGAAAGACATCAAAACATAATCCGGAGGTGGCATCGA
CGAATACATGGCACGAGCATGGTCATACGACTCACATCCAACACCCATCC
CACTTCTCAAGACATTACGCGCCCAGTGGAGGGGGGGGGTATATGGGGCA
CAGCTGTGCTATTGTATGCTGCCAACTACAGTAACACAAGTACAACCGTA
AAATAGTAAAGTATCACTCTTTGCTTGGACCTTTTGGACCTTTTGGACGT
TTTGTTTTCACCAGATGCAGGAGGACGGGAGCATGATAGGCGGAGGCTTC
AACCTGTCGGGCGAGGCTCCCTTCGAGATTCGCGGATTCTCGCTCGCGAA
CCTAGCTCTTTTGATTGGGGTCGGCATTACAGGCGCGTCATTTTACGAGT
ACTTCACTTCTGGTGGCTCCGCCGGGCTTTCTGGCGTCGGGTTCGTGTAT
GGCATTCCCATCTCGCTCATTGGACTTGCGCTCAAGGTAAACTAACTCAG
TAGAACTGTAGGCTGGTCAATTCTGGAGACCTCATGTTAAGACTCGTAAA
GGCACAGTATCCCTCTGAGAGCCTCTTGAGAGGGGTACACAAAGGAGGAA
GGGGGGGGGTAGGCCTTTATTGACAATCGAAGTACTTTGAAGTACCGTAT
TTATTTAGTCTTCGAGAGACACCATGCAAGTACAACGTAAGCAGTTTGTT
CCACTTATTATACGCCGGTACTTTCAACATGCCCACTTCATACCAATAGT
AGGTGTGGGAAAGAGAGGCGAATATTAATTGGTCCATGGTGATCTGCCAA
GGCAGCACTCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGGCG
GACTCTCGGCAGTGAACGCCATCGATACGTAATTGCCTGACCCGATAAAC
TCGGGACTGACCCGATGGCGTATGGCGGTTTCATAAACGGACGTCGCCGC
GGAACTCGGGAGGAATCCCGTAAGCACCAGATTCAGCCTGAGTATGGAGA
TGAGCAGGCTGACGCGGGTCGGGACGGCTGAACCCGTCTCGCGAGACCAA
ATTCTCAGGCACGCACGGAGACAGGGAAATATTAATTTTCCTTGTTCAGC
TGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATACTCTGCTA
TATGTGATGACCATACATACATACATACATATATACATACATACATACAT
AGTCATTCTATGCCACTCGCATTGATCCTCCCGAGGGGGGATCAATGATA
CTTATTACGAAAACCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTA
GGATGACAGGGCCGGATTGCGTGGTTATGTGCAATTTAATAAATACATAC
ATACATACATACATACACTATTTAGAGCTATTAAATAATAACCCATTAGA
TTACACTGTACTATCCAGCACGGATGTCAGTCACTCTGGCTACGAGTACG
ATTGTTCGTTCTTCCGTGCTACTCGTACCTGGTACTCGTACGCAAAAAAA
ACGGAGCCGGAACGTAGTTGTGTTTCCTCGTGGATATTGTATCGACTGAG
TTCGACTGGTCCTACTACTGTGAAACGTTTGCCGTCGGCTGTCAGGCACC
GCTCTGGCTCAAATGCGAAGACGGATGATATATACCAGGGCACAGGATAC
CTTATACTATCAATAGGAAACTCTTGGAAAATAATAGGTACCTGTATCAA
ATATCTGCCACCTCTTTCGATTCCATGGATATATATGTGGACGCCGTCGT
GGAAAGCGGGAGGAATCCCGTGAGTAGGCACCAAACTCAGCCTGAGTGTG
GAAAATGATCGGGCTGGCGCAGGAGGAGACGGCCGAACCCGTCTCGCGAG
ACCAAATTCTCAGGCGCAAGCGGGGACAGGGAAAAATAATATTACCTGTT
CAGCTGACCACGAGCAGGATTGGCAGCCATACCCGGTTCATCTATACTTT
GCTGAAAGTCCAGGCCATACTCCCCCGAGTTTACCGTAAAAATAAGCACT
GTGATTATAATAACGTAGCAGAACGCACGTCGGAAGGGTTATCTCGCCGA
CAAGCAGAACGCACGTTAAGGTTTTGTCGTGGTGATATCAATGTTGAGCT
CCAGTAGAGCCCGAAATATCATAACTCGCCTTCTCCGCAACCACTCTCGA
GCCCGACATGACTATTAGTATTAATAATTGCAGTCAACTACACATTCCTA
TCCTATCCTATCCTATCCTATCCTACCCTATATGTTATAGTACGGTTGGA
TCACGATTCTCTGAGACTATCATGCCGTCGTTACCTGACTTTGATGTTGG
AATAGCCTCTCGCTTGCCTATGACCTCCGATACCCACAGTTGGTTGCAAA
AGCCGTCAGTTTATATCCTGCAAAAGTATTTTGTGTAAAAGCAAAAACGT
CCCGTCGGAGACCACGGCAACACTGCCTCTTCATAACGCGTGCGCATGTT
CGCCCGGTTCGTTCCTGTTGCGTGGACACGGCGCAGTATGCCGAGCTCGA
GCCTGCGCCGCTTCAGACTTCGCCCGAGGCGGATGCTCTGTTCGAAAAAA
AGGCCACTGATGTGCGTGACAGAGAGATAATCAGCTCGATTTCGCGAGTA
GGCAACAAGCTGGATAATACGTTTTAGTATAACACATAGCCGTGGGTGCA
ATGAGACAGGGCGAGAGGCGAGAGATAAATGTATGCAGCGGAATAATACG
GTGTGTGCCATCGTGGGACCGAAATAACGTGCGGTTATCAATCATTATGC
GCAGCGGTCTTTGGCGATTTCCAAGCACGTTATAATTTCCTAGGTGAACG
AAATATTTCCGACGTTTCCTTTTCGGTCGTCGATTGTCAAACCATCAACT
TTTTTTCCCCTGTGGTGGCAGACCATGCGCACGGTCAAGAAGGATGTAAC
GCGGCACCGATACGGGGACGAGGCGCATCTGGACACCACTGTGAAGTTCC
TTGGACTGGTGATGCCGAGGGGGGATTATCCTCAACTGCAATGGATAATG
CAGGCGAGGAAAGGAACGGGTGGGGCGCGGCAGGGCTGGTGCCTAGAGGG
TTCAACGTCGCCAATCGTCACGTTTTCTATGAAAAAGCGGGAAACAGTCT
GGAGGAGTACGTTGCCTTCCTGCGAGTCGACCTACTTTACATGCCTCGGT
TTTACTTTTAAGCCAAGTTACGAAGTCTTGGCTGGCATCACTAAAACGGC
TAGGAGGGGCCATATACTGTAGCGAGAGCTTTCTGGAGTGAGGAGGTGAA
CCTACACGAGTAGCCGGTGCATTGCTCTTGTTCAAGACAGAATCCACCAG
TCCCACCCACCCCTATCTTGCCATACGTGCATTCTGGACGGTTACCCGCG
ATGCACCCTCAACTCTCGGAACCAAATCGGTGGTCGACAGTCGGCTAGAA
ATTGCACCACGAACTACAGCGCGCGCCATGGAAAAGAAAAACGTGTCAAA
AGTGGTTTTTATTTTTATTTTTTCATGACGCAGACACAAACAGGTACGCT
GTCTTCGTCGATATCCCCCTCACCCAATGACGGCGCAAGGCATCAACCTC
TGACGTTGATACTGTAGGGAAGAGCCATGTTGCAACTGTCGCCTCTCTTG
TTTCCCTTATTACTTTGGCGTCAACGAAAACGGCAGACTGTGGAGCCTAA
CGGCGAGCTGGGATTCTCTATGGTGTGGCAATCGAAAAGTACGCCTTTCA
AGAGATGGGTGGAGCCTGAGCGCGTGCAGAAATACGTGTCGTTCTTCGGG
CCCGGGGTCGACGCGGAGGTGAGCTGACAATGCCGAGAAAGCTCGCGGCA
TTGGTAGCTTATCCTAGCTGTGGCGTTTCAGCTCTGCGGCGTGACTTGTT
GTCTTTTTCCCACGCAACGCAGTGAACGCAATGTCGTTGAGGTGCCGCAA
GGGTCATAACCCTGCTTATAGCTTAGAGAGTGAAGATAGAGGGCAAGAGC
AGCCATATCCCATCCAAAATCACGTTCGACAGGCCTTTTAGGAAGGGTGT
TGTGGTCACTCTCTCTCTGGTGAGCGCTGGCAGGATATGAGCCTAACCCC
CACTTGCCCCTTGTGTTGGCGTTGACCGTCTTTCCAGGTGATCAAGGTGG
ACGCCGATGAGCGCCTTGTGGCGATTAAGCTCACTACCCTGCCCCCAGGA
GTCTCGCCGACGCCCAAGGCTGCGCCCCCGCCGCCTTCCGCGAAAGAAGA
GCCGAAAGCCGCCGAGGCTGCCGAGGTGGTCGCTGCGACGCCCGTCACGG
AAACAGAGGAGGCGGCATCCCCTGCGGCGGAGGCTTGATGGGAATTTTTC
GCCCGCGAGGCGCTTCTCCGCCATGAACAACGGGGCTCCTCACGGAAGTG
TGCATGCGTTTCGGCGATGCGGTCTGCCGGTGTGAAAATCGTCTCTCGCG
ACATAGTGTGCAGGGCGCGTAAGCTGTCGAACGTTGTCTGAAGCGCGTCG
AGAAGCACGTGGTATTTGATTAGTTGCACGGTGCGTCTCGATATTCTGGT
GTGGGGTGAGCTTGCGCACTCCCGACTTAATTGCATCAAGATTGATTCTA
GGGGAAAAATGGAGGCATGACAGTCAAACAGGGGATTCGGCGTTTGCTCC
GTCAGCAAGAAATATGTTACAGACGTCTCCAAACGTGCAGATCCTACGTT
TCAGATCCCATCTGGCACATAAAATAGAGAATTATCATATCAAAAAAAGA
TCGCACGGGTAAAATTGCTCATGATTGATCATGATTGCTCATGAGGCACC
GCCGCGTTGGTTTGCCATTCGACTGCCCTGCTGCCCTGTTATCTAGAGAG
GGCTCTCGGGTAGAAGACTCAAAAAGCAAAGTCGCCGCGAGCATTTGTTT
GGGATCGGTTGGATTTCAAAAGTCGTTTTCGGTAGGTGTCATCGACGGAG
AGTACCATGCACCGCATCTATAGCTTGTCGCATGTGTACTTGTTTTTATG
GCACAGCCGTAATCGGTTATTTTTGTGTTTGAAATCGTACTTCGTGGACA
CACGAGGGGGCACAGACACAGACGTTGAGGGTGAGG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig894:252271..258356+

>mRNA_A-nodosum_M_contig894.21.1 ID=mRNA_A-nodosum_M_contig894.21.1|Name=mRNA_A-nodosum_M_contig894.21.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=966bp|location=Sequence derived from alignment at A-nodosum_M_contig894:252271..258356+ (Ascophyllum nodosum dioecious)
ATGGTTCGTGTCGGGTTTCTTTGTGTCGTGGCCGCTGCCAGCGCTGACGT
TTCCACGGGCTTTGTCGCACCCGTCTCGCCGGCTAAAGGTTTAATCGGCT
CTCCACGACTCTCCTTGTCGGCTTTGAACCGGGGGTCAGCATTAGAGCGG
GCCGTGGTATCCCAGAAAGGAAGCCGGTCACGCCGCCGGCCGCTTGGTCT
TCAGATGCAGGAGGACGGGAGCATGATAGGCGGAGGCTTCAACCTGTCGG
GCGAGGCTCCCTTCGAGATTCGCGGATTCTCGCTCGCGAACCTAGCTCTT
TTGATTGGGGTCGGCATTACAGGCGCGTCATTTTACGAGTACTTCACTTC
TGGTGGCTCCGCCGGGCTTTCTGGCGTCGGGTTCGTGTATGGCATTCCCA
TCTCGCTCATTGGACTTGCGCTCAAGTATGCCGAGCTCGAGCCTGCGCCG
CTTCAGACTTCGCCCGAGGCGGATGCTCTGTTCGAAAAAAAGGCCACTGA
TACCATGCGCACGGTCAAGAAGGATGTAACGCGGCACCGATACGGGGACG
AGGCGCATCTGGACACCACTGTGAAGTTCCTTGGACTGGTGATGCCGAGG
GGGGATTATCCTCAACTGCAATGGATAATGCAGACTGTGGAGCCTAACGG
CGAGCTGGGATTCTCTATGGTGTGGCAATCGAAAAGTACGCCTTTCAAGA
GATGGGTGGAGCCTGAGCGCGTGCAGAAATACGTGTCGTTCTTCGGGCCC
GGGGTCGACGCGGAGGTGATCAAGGTGGACGCCGATGAGCGCCTTGTGGC
GATTAAGCTCACTACCCTGCCCCCAGGAGTCTCGCCGACGCCCAAGGCTG
CGCCCCCGCCGCCTTCCGCGAAAGAAGAGCCGAAAGCCGCCGAGGCTGCC
GAGGTGGTCGCTGCGACGCCCGTCACGGAAACAGAGGAGGCGGCATCCCC
TGCGGCGGAGGCTTGA
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