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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 533 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | Fibronectin type III |
| Ec32 ortholog | Ec-06_000050.1 |
| Cds size | 369 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870321.225113-UTR-A-nodosum_M_contig894:19282..19401 | 1680870321.225113-UTR-A-nodosum_M_contig894:19282..19401 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig894 19283..19401 - |
| 1680870321.2661276-UTR-A-nodosum_M_contig894:27932..27977 | 1680870321.2661276-UTR-A-nodosum_M_contig894:27932..27977 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig894 27933..27977 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870321.237415-CDS-A-nodosum_M_contig894:19401..19716 | 1680870321.237415-CDS-A-nodosum_M_contig894:19401..19716 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig894 19402..19716 - |
| 1680870321.2518497-CDS-A-nodosum_M_contig894:27878..27932 | 1680870321.2518497-CDS-A-nodosum_M_contig894:27878..27932 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig894 27879..27932 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig894.1.3 >prot_A-nodosum_M_contig894.1.3 ID=prot_A-nodosum_M_contig894.1.3|Name=mRNA_A-nodosum_M_contig894.1.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=123bp
MWHGRAQEYKVEYKRSNETWLECQRRHTGSGSPSVLVISGLRKGSKYVFR
LYAAFERGVFEGPGVEHTFKTKKGAVPTCRLNLSKTPSVVAVTPKWWIPL
NVHKSTGLSLYRHASKQHRTPV* back to topmRNA from alignment at A-nodosum_M_contig894:19283..27977- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig894.1.3 ID=mRNA_A-nodosum_M_contig894.1.3|Name=mRNA_A-nodosum_M_contig894.1.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8695bp|location=Sequence derived from alignment at A-nodosum_M_contig894:19283..27977- (Ascophyllum nodosum dioecious)
CCGATCTTGGAGTGCCAGTCTACCAACGAAGATTCCGTCACCTTGATGTG
GCATGGGCGCGCCCAAGAATATAAAGTGGAGTACAAGCGCTCAAACGAGG
TGCGTGTGCGACGTCGTGCGTGTACCAGGTAGTCCCTGTTAAAGCCGTCT
TCAGGTGTATCGCGCCCGATCCCATTCCCCGCCCTTGCTGGAATATCCTC
TATTGGGAGGGAGTTTTCTTCCCAGTATTGAAGCATGCTCGAGATGCTAT
GTTCGTAAGCGCTTGCGACGCGGCTTCCCGTCTCTTACCACTCGAGCCAG
CCGCGTTCAAGATGAAGAAAGGTTGTTTTAAGACTTGAGATATTATCATC
ACCAGCTTCGATGCAGAACAGGAATTAAGAAAGTTGCCATAGAGGCTGCG
ATAGCTAGGTAAGCGAGGGAAGTGATCGCGGTAGGGTGATTCCCACACCG
CTCCTCAAACTATGCTACCCTAAAGGTTCGCTAGAAGACAAAACAACTAG
AACACAATTTTAACCGGATATATTTTTCCTGGGTTGGGATCTCAAGGACT
CTTATCGTAAGCTCGCCTCGTCATACCCCCGAAAGCGGCACAATTACTTC
TAATCATTCACTAGGAAGGTTTCACAGAGATTTCTGAACTGCCTACAGAC
AGCCGTATCACTAACTTGAGTTTGACAGAGTGCGCGCAAAACATACGACT
CCGAACATCCCCGCTTGCTCAACAAACCAAAAGCACAGGCTTCCGCTCGC
CCCCCCTGCCTCCTGGCGGGGGTGAACCAAAACCGTGGAAGTGAGGAAAC
GGTAAGGAGTGCAGAGTAAGTACCTAACGCTGTCGAAACGCTGCAATCGT
GCTGTGATCAGCTCACGGCATACCCGATGGCGCTGGCGGTGCACTGCCAG
TTGAATCCACAAACCAAACCGTTCGTACCAACGGTTATGGCACCAAAACT
GGAGTACCGCCGCGGAAAACGGGAGGAAGGAGAGTACCCCGTGAGAAAGG
ATCAGATTTGCCCCGGGAACGGAAGATGAGCGGGGCGACGCGGGGGAGAA
CGGCTGAACCCACATCGCGAGACCAAATCCAAAGGCAAGAGCGGGGACTG
AGAAAGGAGAATCATGGAAAAAAGTCACAAAGAGGAGGAGATTCTTGGCG
CACAAACGGAGTTGGCGAGGCAGAGCAGAGCGGCGCCTCGTGCGACAGAG
CGAAGAGAGGAATCGAGCACGTGCGCGTAGACGAGAGATCACAGTTGCCA
TGCCCAACGTGCAAACGATGGTGGTAGATGGCACGCACGGAGTCGGACGA
GCGCTCAATGTTTTGAGTGTGTACGATCCACTGGGGTGCGACGTCATCGG
CCTGCAGGAGACCCGCCGCAGTGAACACACAGCCTTCTTCCAGGCTGACT
ACCTAGTGTACTGCAGCGGTGAGTGCGATGGCGAGAATGGTGGGAAGAAA
GGGCAAGGTGGAGTAAGGCTAGCTGTGAAGAGCTCCATCACGCGTGCTGC
AAACCCACTGGAGTTTATCAGTATTCGCTTGCTGAATGTTACACTTGAAA
TACGTGGTCGAGCCAAGGCCGTTACGTTTATTGTGCCTCATGCCCCAACC
CAAACATAGAATGCTAGTGATAAACATACATTCTGGACGACCTTGGACAG
AGCTGTGGAGGAGGTACCTAAACACGAACAGCTGTTTGTGTTGATTGATG
CGATCGCCCGCACGGGGAGGAGGGAGAAGGGAAGGGTGGGGAGCGAGGAT
AACAAAATTATTGGTGTCTACAGCCGAGAAACCCTCAACGACAAAGGAGA
ATACAGCTGTCCTTCGCTAGCAACCATGATCTAGCGCTTGTGAACACATT
CTTCAGCACACCTAAGGGCGGCATATCACATACTTTCAACGTGCGAGGCA
AAAAACGTATCGACTGCATCCCAACGAGTCAACATTATCGCAAACTTGCA
CGGAACGTTACGGTGCACCCCCAACCCTTCTTACTACCCCTTTCAGACCA
CAACAATGTGTCCCCTCCCGTCAAGCTCATCGTCCACTTTGCTCGAAACC
GCCGATCGAGGACCTCGGGTAAGCCGCCAGCGGGCCATAGGCGCCTGATG
ACTAATCCCCAATTTCGACGGAGGTGGACACCTCAGGGCAAACACGTCAG
GAGATATCTATGTGGACGACGTGGAAGCCGCATTTTCCGCGGCCATCATG
CGGAGCGCTGAAGTGGTGATCCCACCCCAGGAGCAAAGGGTACCAGGGTA
AGGTTGGAGTGGAGACGCCCAAACGGAAGATGAGCTGCAGGCTTCGCCTG
ATGCGATGCACGTAGCCTAGCAGCGCCTGAAAAGAGACACCAGGAATGCG
CAGCTGCGGAGGGCCATCAGGAATGCATGTAACTGGCTGAAAAGAGTGCG
AAGTGCAGCAGTCGTTCGTTTCTTCGAGCGCCACGTCGTTGAGTTGGAGA
AGCAGTTGCGCATGGGAGACCAGCATTGATCCTTCCAAAACATCAAATGG
GTGCAGCTGGAGGAGACGACGACGGTGGAATCACAGTACATCCGCGACGA
GAAAGGTTGATGCGAAACAAAGGGCGTATCCGCGAGAGATGGATGCGTTT
CTTGCGCTTGCTGCTGAACGCGAAATACGACATGCTACATCCCGACATCC
CAAAGAGGCTCCCGCAGCAACCACTCGCGAGTGCCCTTGGGATCGAGCCC
ACGGAGAAGATTGCCAAAGCAATGGCGAACGCGAAAGCAGTGGGTCCGGA
CGGCCTTACGGTGGAACTGCTGAAACTCGGACTTCAAGATCGGATCATCT
TGCTGGAGCTCCATCGACTTACCATCCTCATCTGGCGCGAGGTTAAAGTC
CCGCAGCAATGGAAAGACGCGGTAATTACCGTACTCCACAAGAAGGCCGA
CAAGACGGAGTGCGCAAACTACCGTGCTACTTTAAGTGGTTGCCAGGAGA
CTTGGCGATTACTGTGAGGGCAAGAGACTGTTACCCGAAGAGCAGTGCGG
GTTTCGACCGGATCGCTCGATGACAGACATGATGTTTTTTGGTGCGCATG
CAGGACATTGGGTTGGAGGCAGGAGTGTCTATCTTCATGTGCTTCATAGA
CCTCCAGAAGGCGTACGACACCGTTGACCGTACCCTCCTGTGGCAGGTAC
GCACTCGCATCGGAGTACCACCGCAGATGATAGCAGTCATCCGACAATTC
CACCATGGCATGAGAGCGTGTGCGCGACCTGATGACGTCTCTTAGGATTG
GTTCGAAGTGGAGTAAGGACCACGTTAAGGATGCGTGCTATCCCCGCTGT
TGTTCAACATCTTCCTCGCAGCCGTACTGACTGTTGCGCTCCGAAGCTTC
AGCGAGAATCCGGTCATCCTTGCTGATCTGATGCATCTGAAGGAACCGCC
GACGTCGATGGGATCGGAGCCGACTATGGGCTACGTTCGTCGTGCGGTGT
GGTGTATGCTGTACGCGGATGACGCCCGCATAGTTTCTCGATCGTCAAGA
TGCTGGAACTCATCGTAGAGGTTTGCCGAGCCTTCGATATAACCGTGTCG
GCGAAGGAAACAGAGACCATGTGCATACCTCCACCGCGTAAACCGCGGAC
GATCGTGCGAGTTCAAGTGGCCGGGCAAATATACAAACAGGTGCAATCCT
TCACCTACCTGGGGGGCGCCGTGACCGAAACCCCGGACATGTCTGTTGAA
CTTGCCCGGTGGACACGCGCATGCTGGATGCGCATCAGGCGGCACCTACG
TGAGCTTTACGACAAGTCAAAAGTGGCGCTCTCCCTCAACACCCGAATGG
TAAAGGCCGAAGCAATGGAGACTCTACTGTATGAATGCAGTACGTGGAGC
CTTCGCCAGGAACACTATGGCAAACTCCGCACCGTACACCACCGGGCCTT
GCATCGGATCATCGGGGCATAGCGCAAAAGACCAGACCATCGGATGACCT
CTTACAACGGTGCCCTCGAGTGTGCAAGCATTGAGACGACGTTGCGCACT
AGATGACGTTTTTAGACGGGGGCGCTCATCCGAATAAGTGACGGGGACGG
TTGCCAAAGCGAATCGTTTTCGGACACCTTGAAGGTGCAGTGGGGAGAGG
ACGGGGTAGGAAAGAGAAAGAGTGGAGCGATTGCGTACAGAGCGACGTCC
GGGCGTTTTGCATAGCGGGGGATTAGAAAGCGACCGCGTTGGAGGCAGAG
GTGTGGGTTGAGACGATCACGGAGGGTGGGCGAAGGTTTATGGCCGCGTG
GAGGGAAAAAAATGTGGAGGCGGCTAGACATCGCCAGAAGATAACGAGAC
TGGGAAAGTTGCTATCGTTCACCGAAGCGTTGAACCTGCGAAGCGACACT
AATTGGCCTAGTCGACAAGTCGTAGGAAAATCCTGTACGGCTGCGAGACG
GACCGAAACCTGCGTGGCGCCTAGGCATGTAGATGCGTCACGTGATGTCG
AACCCTAACCCTAACCCTCCTCGCGCCCCCACTCATCCGTTTCCGGCCCC
TCGCACTCGAGTTCATCCAATTCTGGCTCCTCGCGCCCGTGGTCGTCCAA
ATCCAGCTCCTTGCCCGAGGGCTCGTCCAATTCTAGCGGTATTGACCGCT
CCGTTCCCAGCGTCTGTTGATCCAGCGCCCTCGGGAAAATCCTGAGCGAC
CCCGGCTTTGATGGCGGTGGTCGATCGAGCGAATGGTGAATCTCGCTACA
GCGGTAGAGGTCGTACCAGCGCTTGCGGGGAAATCCCTGTTGGCTCTTGC
GCTAGTGGCAGAAGTCGTCGTAGCGCTTGAGTGGAAGTCTCGGGTGACTC
TCCCTACAACGGAAGAGACCGCTCTTCCGCCAAATTCGCCCGTTCCGGTC
TTGAAGAGTATGCATGTATGTATGACCATCACGTCTAGCAGACTGGGCAT
CAAACGGTATGGTTGCCAATCCTACTTGTGGTCAGCTGGACATGGATAAC
TATTTTTCCTTGTCCCCGTCTGCCGCGACAGAGAGTGGTCTCGCGAGACG
GGTTCGGCGGTTCCGTCCTGCGCCAGCGCGCTCATTCTCAACACTTGGGC
TGGGTCTGATCCTTACTTACGGGCTTCACGGACGGGCCTTGCTTTCCACG
ACGGTGTCCATCTATACCGTCAACCGCCATCGGGTCAGTTCCTAGTATCG
GGTCACGCGATGGCGTTAACCATCGGGAGTCCGCCGGTACAAGACTGGTA
TTAATAGTCCTGACGGTAGCTCCAGTAATGGGTGCTGCCTATTCAAGGAA
AGCTATGGACCAATTTATGCGCCCCCTTCTTTACCCACACCCACTATTGG
TACAGCGGACATATGCGATATTGATATATTACATGGGAGCCGGCAATCTT
TCGGCTCATAAGCCAACGGCGATAACCATTTTTCTCTAGCGCTCTATCGC
TCTGGCGACGCGAAAAATGTTTCGGTGCTTCCCCAACGCGCTTCCACTCC
AGGGGGGTATTCGGAAGCCTCGCCGGTTTCGCCGACTCGACCAAAACGGG
GTACGCGCATACTTGTTCAACGACGCGAAACCGGCGGTTCTCATTTTCTA
CCAGGCCGGTTGTTGCCCGTTGGGGCGAGGGCGACTCGTCGGTAGACATA
TCCGCCACGACGTGCACGGCGAGTGGTTTTTCTCTTCCGCTCGCTGCGTG
GGCAGCGCGTCTTGGTGTTCCTGCTCACGCGGGATGGTATGGGCGTTATC
TCGCAGCTGCAACTCGACGGGGATGATCAGTGATTTCGGGGAATGACCTG
CCGCCAAACGCAGGCGCTTTATGCGTCGCTAGTGATCGCACTTGAAGTCG
CAACCGCAACTACCCTCGCAGGAGCTTGGGCATCTCCATCATCACTTTTG
TGCTGTCCTCACTCAGTGGTCATCTTCTTCACGCTTGATCCTTGCGCAGC
AAACGACGGGCTCCCTGCTGTCTCCGTTGACAGCCTCGTTATAACGTGTT
CGAGATGCTCTGTTCGTAAGAGCTTGTGACGCCGCTTCCCGTCGTCTCTT
ACCGTTCGAGCCACACGCGTTCAAGATAAAAAAGGGTTGTGTAAGATGTT
TATTGTTATACCGCCAGCACCAATGCAGGAAAGGAAGGGAGAAAATTACC
ATGGAAACTGGGAAAGGTCGGTAAAATAAGGAAATAATCGCGGCAGGCCG
AGTCCCACACCGCTGCGCAAAAGGCTCGGTTGAAGACAAATCAACGAGAA
CACAATTTAATGAACACCGTAAACATTTTTTCCTGGTCCGAGATCCCGGG
GACACTAATGGTAAATTCGCCGCGTCGTACCCCTAAAAGCGGCGTAATTA
TCGCTATCATCCTATAATAGAAGAAGTTTTGGTCATATTCACTATTAACA
CGTGAGACCCTTGAACTAATATACTATACCTGGTAGTCTATAGATAGACA
GCAATATAACTATTAATAACTTGGTTTTGTTAGAGTACACATAAACCGTG
CCACCCCAAATGAAGCACAGTACCTATTGGTATTAATAGCGACCTTGTCT
TCAAACTTCATGATCGACCAACCTGGCGAGGAGCGCGAATATCATTACTG
TAGTTGTAAACTTTTTAATACCCTACATGAGGGCAATAATTACTGGTCTC
TGTCGTGCTTGTTCTCGATGCTCCTTGCGCAATTTTGACCATTTCTAAAC
GATTACAGGCGGTGACTTACTACATTGCTTCGGTGCAAGGAAATTGCACT
AATAATATGTAATGCAGCGCTTAGCGCTGCACTACAGGAGAGAATCCGGC
GTTAAACTTCAGCTTCGCAGAATCCGCTCAACATGCACAATTTCTTAGGG
CATACTCGGGACAATCCGAGCTTACAGTTTAAGCCTTGAGCGGTGATCCT
TGACCCAGTAGCTTAGACGATTTGGTGATGACTGAAACATTCCACTCTTC
GGAAGTGTGCTAGTGATTTGAAGGTTCACCAACATCCCGGTGCAGGTGTT
GGGAGGATATTGTTTGTGACCTCCGACGGCTTAATGCCTTGCCTTCGCCT
TAGACTCACCTGAGACCATCTGGAAGCACCTGAGAAGCCACAAGCTCAGC
TACACTGCTGCACACAGCCGCACACGACTGACCGGCGTACGTGAAACGTT
TGCTGCGAATCGATACAAAATTTGCCGAGATAGTGGCACTACACTGATTT
ACGGGCAGGGTTCGAGTTTCGCAGAATCCGCTAAATATACACAGATTCTT
GGAACTGACTCGGATGACCCTCAGCTACAATTTTAGCTCGGACGGTACGT
TATTCATAAGATAGGTATTTTCCCTCTTTCCCGCAGCCTTACCGCAGACA
ACCGAGTACCTGGTATGATCCGTGATATAGCCGGGTGAGGTGAGTGTGAC
CGAGCACTATTAAAAGTGACGAAGGGGGATGTCGCGTTCAGTTGGAGTAT
GGAGGTTTTGTTTAGGGTCGAGTTGGGTCCACGGTGCCGACCTGGTGTCA
CAAAACAACAGTGGCGCCTACTGCGTTCGAATTCGCCGGACAAAACCATC
AGAATCAGACAATTTTCCCCGCCCTCGCCTTTGCGCTATTTTGCCTTATA
CAGCACACACTATATTCGCTGAAACTTCTGTTGAAATAGTTTCGTCTAGG
AAGAAACATATTTCTACGAAGTGGTAAAGTACCCTTGGTGAGGTTACGTT
AGACCTATTTTTTGCCCTCGTCGCCCGAGTGGTCTAGTAGGTAACCTGCA
CACCTGCTAGTGCGATTCTTACCAAAGTAGGATTTGTGTACTTTCTTTCG
TAACGGAAAGCGTGGGAACGTGAGTAAGTAAATTTCAACCATTGGTTGAC
GAGTTGTAAGAGTGCTGAACTTGCATCGCGATAAAAAATTGTAAGGCGTG
AACCGGGGAGAGATGGGAAGATCCTTTGTGACCAGAGGCAGGATGGTAAT
GACGAGGTCCATCGGCTATAAGTGAGATTAAAGAAAAAAAAAAAAAAAAA
TGTTCACATTATAGTATGGTCTAATAGACTAATAGGCTATTGCACAGACT
CGTGAGTTACTCAACTGATAGAAGTGCAAGAACTTCATCGTATATCTTGT
ATTTGTCCCAGAAACAAAGTAAAGAAACGGCGGGTCTTGGCGTACAGCCG
TTTAATATCGGCCTCCATGCGTTACTGGTTTCGCTTAATCCGTACTCCGA
CCACCGCCCCTTGTTATGAGCTCTGGACGCGTGACACACTGTGGTTCCAT
CCGATAAGCATTGCGGCGTGATTGGCGACCCATCGTTATCTCTCGCTCTT
GCCTGCGGCAGACATGGCTGGAGTGCCAAAGAAGGCATACGGGGTCAGGA
AGTCCAAGCGTTTTGGTGATAAGCGGACTGAGGAAAGGTTCAAAATACGT
GTTCCGATTGTATGCTGCGTTCGAGCGAGGAGTTTTCGAGGGTCCAGGGG
TCGAACACACGTTTAAGACAAAAAAAGGTGCAGTACCCACTTGCCGACTA
AATTTGAGCAAAACTCCCTCTGTGGTGGCGGTCACACCTAAATGGTGGAT
CCCGTTGAATGTACACAAAAGCACGGGACTCTCCCTGTATCGACACGCCT
CAAAACAGCACCGGACACCAGTCTGAGCGTGCAACAGATCGCCACAGGCA
AATGGGGCCGTTCATTCCCATACCCGCCGCTTACTCGAATTTGAATCGCT
TTCAGGGCCGGGGTGCTGTACAGTAGCGTGACGGATGGACAGCGG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig894:19283..27977- >mRNA_A-nodosum_M_contig894.1.3 ID=mRNA_A-nodosum_M_contig894.1.3|Name=mRNA_A-nodosum_M_contig894.1.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=369bp|location=Sequence derived from alignment at A-nodosum_M_contig894:19283..27977- (Ascophyllum nodosum dioecious)
ATGTGGCATGGGCGCGCCCAAGAATATAAAGTGGAGTACAAGCGCTCAAA
CGAGACATGGCTGGAGTGCCAAAGAAGGCATACGGGGTCAGGAAGTCCAA
GCGTTTTGGTGATAAGCGGACTGAGGAAAGGTTCAAAATACGTGTTCCGA
TTGTATGCTGCGTTCGAGCGAGGAGTTTTCGAGGGTCCAGGGGTCGAACA
CACGTTTAAGACAAAAAAAGGTGCAGTACCCACTTGCCGACTAAATTTGA
GCAAAACTCCCTCTGTGGTGGCGGTCACACCTAAATGGTGGATCCCGTTG
AATGTACACAAAAGCACGGGACTCTCCCTGTATCGACACGCCTCAAAACA
GCACCGGACACCAGTCTGA back to top
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