mRNA_A-nodosum_M_contig8916.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: A0A6H5KL59_9PHAE (Trimethylguanosine synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL59_9PHAE) HSP 1 Score: 323 bits (829), Expect = 2.560e-90 Identity = 169/233 (72.53%), Postives = 191/233 (81.97%), Query Frame = 1
Query: 1522 RKIYKGSEHGKVKVLFPNMSPWRRDRLRFDEESLWSITDQNTAAKISDITLTLPGVWTSTVVVDGTACVGGNAISFASTFDEVWAVEIDEERFVLLKGNVKKA-AGSTPGCRRVRFFNADFLKVLETERETIGAKQPVVFLDPPWGGVHYKKHVRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTNFNITGFRDAVGSAGRVTVHHRNMRKMLLVAIDYELEPLSS 2217
RKIYKGSEHGKVK LFPNMSP RR+RLRFDEESLWSITDQNTA +++ I L LPGV ST +VDGTACVGGNAISFAS FDEVWAVEID +RF LLKGNVKKA A S + VRFFNADFL+VLETER I K+P+VF+DPPWGG YKK + +VDL LS TP+ DVCGRAA AGARHVLLKVPTNFN+ GFR+AVG AGRV+ H ++RKMLLVA+DY+L P+SS
Sbjct: 346 RKIYKGSEHGKVKFLFPNMSPKRRNRLRFDEESLWSITDQNTADEMTKIALLLPGVSASTAIVDGTACVGGNAISFASAFDEVWAVEIDPDRFDLLKGNVKKAIARSAHKEKTVRFFNADFLQVLETERGGITEKRPIVFIDPPWGGEEYKK------KGLVDLSLSDTPMVDVCGRAAKAGARHVLLKVPTNFNLRGFRNAVGPAGRVSSH--DLRKMLLVAVDYDLRPVSS 570
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: D7FZS8_ECTSI (Trimethylguanosine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS8_ECTSI) HSP 1 Score: 231 bits (588), Expect = 4.900e-66 Identity = 123/178 (69.10%), Postives = 137/178 (76.97%), Query Frame = 1
Query: 1576 MSPWRRDRLRFDEESLWSITDQNTAAKISDITLTLPGVWTSTVVVDGTACVGGNAISFASTFDEVWAVEIDEERFVLLKGNVKKA-AGSTPGCRRVRFFNADFLKVLETERETIGAKQPVVFLDPPWGGVHYKKH---VRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTN 2097
MSP RR+RLRFDEESLWSITDQNTA +++ I L LPGV ST +VDGTACVGGNAISF S FDEVWAVEID +RF LLKGNVKKA A S + VRFFNADFL+VLETER I K+P+VF+DPPWGG YKK +VDL LS TP+ DVCGRAA AGARHVLLKV T+
Sbjct: 1 MSPKRRNRLRFDEESLWSITDQNTADEMTKIALLLPGVSASTAIVDGTACVGGNAISFVSAFDEVWAVEIDPDRFDLLKGNVKKAIARSAHKEKTVRFFNADFLRVLETERGGIAEKRPIVFIDPPWGGEEYKKKGXXXXXXXXGLVDLSLSDTPMVDVCGRAAKAGARHVLLKVTTS 178
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: A0A835YTB6_9STRA (Trimethylguanosine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB6_9STRA) HSP 1 Score: 166 bits (420), Expect = 7.980e-38 Identity = 114/298 (38.26%), Postives = 140/298 (46.98%), Query Frame = 1
Query: 1528 IYKGSEHGKVKVLFPNMSPWRRDRLRFDEESLWSITDQNTAAKISDITLTLPGVWTSTVVVDGTACVGGNAISFAS--TFDEVWAVEIDEERFVLLKGNVKKAAGSTPGCRRVRFFNADFLKVLETERETI------------------------------------------------GAKQP----------------------VVFLDPPWGGVHYKKHVRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTNFNITGFRDAVGSAGRVTVHHRNMRKMLLVAIDYELE 2205
IY GS HGKV LF M RR RL+FD SL+S+TDQ TA +I++I L LPGV T+T ++DGTACVGGN ISFAS F +VWAVE+D R+ LLK NVK G +RV DF+ + E ++ AK+ VVFLDPPWGG Y + +DL LSG PL +C R AR+V LKVP NF I F A +TVH R +RKMLL+ +DY E
Sbjct: 844 IYTGSTHGKVNFLFAKMDAQRRHRLQFDATSLYSVTDQRTADQITEILLGLPGVDTATPIIDGTACVGGNVISFASHGQFQQVWAVELDPTRYKLLKHNVKVVLGGKLARQRVHCLQHDFVSLTEVGHGSLPPXXXXXXXXXXXQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKEEGGGTGNCVRKRGNAVLPFEGSVVFLDPPWGGPDYLEVPE------LDLQLSGVPLGQLCARLRGR-ARYVALKVPVNFGIGAFAAAAAEGTTITVH-RQLRKMLLLVLDYSAE 1133
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: A0A3F2RVX0_9STRA (Trimethylguanosine synthase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVX0_9STRA) HSP 1 Score: 115 bits (289), Expect = 8.380e-25 Identity = 100/285 (35.09%), Postives = 136/285 (47.72%), Query Frame = 1
Query: 1426 SLAKRGDRGNEDEVLDVNYVEVDEETLTTPKGRKIYKGSEHGKVKVLFPNMSPWRRDRLRFDEESLWSITDQNTAAKISDITLTL----------------------------PGVWTSTVVVDGTACVGGNAISFASTFDEVWAVEIDEERFVLLKGNVKKAAGSTPGCRRVRFFNADFLKVLETERETIGAKQPVVFLDPPWGGVHYKKHVRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTNFNITGFRDAVGSAGRVTVHHRNMRKMLLVAIDY 2196
+LAK G R N D V+ V VD +P GR S F N+ R++L+ DE + +S+TD A KIS+ L L V VV DGTACVGGN +SF F V AVE D R +L+ N++ + + C +A +L V+ +G +Q VVFLDPPWGG YK R VDLFL G PL ++C R A+ V+LKVP+NF+ F V G+V + R+++KM LV +D+
Sbjct: 11 ALAK-GPRPN-DHVIVEEAVHVDATQRRSPVGRP---HSPDYNRDFFFRNLDFEIRNQLQVDEVAEFSVTDFEMATKISEAVLGLFDPPKDDDGLEDGNEKHERGEELSPSPVERVKYPLVVTDGTACVGGNVLSFCDFFTHVNAVENDATRVQMLQHNLQVLSKTNAKC-----IHASYLDVM------LGLQQDVVFLDPPWGGPEYKDLER------VDLFLGGVPLHEICTRLQGT-AKCVVLKVPSNFDDEKFAQFV--PGKVVIR-RDLKKMHLVLLDF 269
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: A0A329S940_9STRA (Trimethylguanosine synthase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S940_9STRA) HSP 1 Score: 114 bits (286), Expect = 6.610e-23 Identity = 86/236 (36.44%), Postives = 123/236 (52.12%), Query Frame = 1
Query: 1564 LFPNMSPWRRDRLRFDEESLWSITDQNTAAKISDITLTL-----------PGV-----WTST---------VVVDGTACVGGNAISFASTFDEVWAVEIDEERFVLLKGNVKKAAGSTPGCRRVRFFNADFLKVLETERETIGAKQPVVFLDPPWGGVHYKKHVRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTNFNITGFRDAVGSAGRVTVHHRNMRKMLLVAIDY 2196
F N+ R++L+ DE + +S+TD A KIS L L G+ T+T VV DGTACVGGN +SF F V A+E D R +L+ N++ + C +A++L V+ + +Q VVFLDPPWGG YK D VDLFL G+PL D+C R + A+ ++LKVP+NF+ T F V G+V + R+++KM LV +D+
Sbjct: 256 FFRNLDYELRNQLQVDEVAEFSVTDFEMATKISQFILDLFVPPKDDTTSESGIEDQDDGTTTIEERKKYPLVVTDGTACVGGNVLSFCDFFTHVNAIENDSTRVRMLRHNLQVLQKTNAKC-----IHANYLDVM------LELEQDVVFLDPPWGGPEYKD------LDKVDLFLGGSPLHDICMRLQGS-AKCIVLKVPSNFDDTKFSQHV--PGKVVIR-RDLKKMHLVLLDF 470
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: W2QLX3_PHYPN (Trimethylguanosine synthase n=10 Tax=Phytophthora TaxID=4783 RepID=W2QLX3_PHYPN) HSP 1 Score: 115 bits (288), Expect = 8.170e-23 Identity = 86/236 (36.44%), Postives = 117/236 (49.58%), Query Frame = 1
Query: 1564 LFPNMSPWRRDRLRFDEESLWSITDQNTAAKISDITLTL------------------PGVWTST-------VVVDGTACVGGNAISFASTFDEVWAVEIDEERFVLLKGNVKKAAGSTPGCRRVRFFNADFLKVLETERETIGAKQPVVFLDPPWGGVHYKKHVRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTNFNITGFRDAVGSAGRVTVHHRNMRKMLLVAIDY 2196
F N+ R +LR DE + +S+TD A KIS L L G T+ VV DGTACVGGN +SF F V AVE D R +L+ N+ + C +A++L V+ + KQ VVFLDPPWGG YK D VDLFL G PL ++C R + A+ ++LKVP+NF+ F V G+V + R+++KM LV +D+
Sbjct: 339 FFRNLDYELRSQLRVDEVAEFSVTDFEMATKISQFVLELFVPTRDDMTSECDNEDRDDGTTTTEERKKYPLVVTDGTACVGGNVLSFCDFFTHVNAVENDSTRVEMLRHNLHVLQKTNANC-----IHANYLDVM------LELKQDVVFLDPPWGGPEYKD------LDKVDLFLGGLPLHEICTRLHGS-AKCIVLKVPSNFDNAKFSQLV--PGKVVIR-RDLKKMHLVLLDF 553
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: D0NIF9_PHYIT (Trimethylguanosine synthase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NIF9_PHYIT) HSP 1 Score: 114 bits (284), Expect = 1.580e-22 Identity = 87/236 (36.86%), Postives = 117/236 (49.58%), Query Frame = 1
Query: 1564 LFPNMSPWRRDRLRFDEESLWSITDQNTAAKISDITLTL------------------PGVWT-------STVVVDGTACVGGNAISFASTFDEVWAVEIDEERFVLLKGNVKKAAGSTPGCRRVRFFNADFLKVLETERETIGAKQPVVFLDPPWGGVHYKKHVRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTNFNITGFRDAVGSAGRVTVHHRNMRKMLLVAIDY 2196
F N+ R +L+ DE + +S+TD A KIS L L G T S VV DGTACVGGN +SF F V AVE D R +L+ N++ + C A++L V+ + +Q VVFLDPPWGG YK D VDLFL G PL D+C R + A+ V+LKVP+NF+ F V G+V + R+++KM LV +D+
Sbjct: 283 FFRNLDYDLRSQLQVDEVAEFSVTDFEMATKISQFVLDLFFPSKDGTTSESGSSVHDDGTATTEKCKKYSLVVTDGTACVGGNVLSFCDFFTHVNAVENDSTRMQMLRHNLQVLQKTNVKC-----IYANYLDVM------LELEQDVVFLDPPWGGPEYKG------LDKVDLFLGGFPLHDICSRLKGS-AKCVVLKVPSNFDDAKFSQLV--PGKVVIR-RDLKKMHLVLLDF 497
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: A0A8J5IXQ2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IXQ2_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.490e-22 Identity = 83/224 (37.05%), Postives = 117/224 (52.23%), Query Frame = 1
Query: 1600 LRFDEESLWSITDQNTAAKISDITLTL---PGVWTST----------------------VVVDGTACVGGNAISFASTFDEVWAVEIDEERFVLLKGNVKKAAGSTPGCRRVRFFNADFLKVLETERETIGAKQPVVFLDPPWGGVHYKKHVRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTNFNITGFRDAVGSAGRVTVHHRNMRKMLLVAIDY 2196
L+ DE + +S+TD A KIS L L P T++ VV DGTACVGGN +SF F V A+E D R +L+ N++ + C +A++L V+ + +Q VVFLDPPWGG YK D VDLFL G+PL D+C R A+ A+ ++LKVP+NF+ T F V G+V + R+++KM LV +D+
Sbjct: 233 LQVDEVAEFSVTDFEMATKISQFILDLFVPPKDDTTSESGIEXXXXXXXXXXXXKKYPLVVTDGTACVGGNVLSFCDFFTHVNAIENDSTRVRMLRHNLQVLQKTNAKC-----IHANYLDVM------LELEQDVVFLDPPWGGPEYKD------LDKVDLFLGGSPLHDICTRLQAS-AKCIVLKVPSNFDDTKFSQHV--PGKVVIR-RDLKKMHLVLLDF 435
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: A0A5D6XFJ8_9STRA (Trimethylguanosine synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFJ8_9STRA) HSP 1 Score: 111 bits (278), Expect = 6.140e-22 Identity = 85/228 (37.28%), Postives = 114/228 (50.00%), Query Frame = 1
Query: 1564 LFPNMSPWRRDRLRFDEESLWSITDQNTAAKISDITLTL-----------------PGVWTSTVVVDGTACVGGNAISFASTFDEVWAVEIDEERFVLLKGNVKKAAGSTPGCRRVRFFNADFLKVLETERETIGAKQPVVFLDPPWGGVHYKKHVRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTNFNITGFRDAVGSAGRVTVHHRNMRKMLLVAIDY 2196
F N+ R RL+ D+ + +S+T+ TA KIS+ + L P ++ VV D TACVGGN ISF F V AVE D R +L+ N+ S C +A +L V+ +Q VVF+DPPWGG YK + VDLFL TPL DVC + A+ V LKVPTNF+ F + V G+V+V ++ KM LV ID+
Sbjct: 246 FFRNLDFETRSRLQIDDVAGFSVTEHETATKISEAVMDLFDGSERAAAAPAASGDLPRRRSALVVTDATACVGGNVISFCDYFAIVNAVECDLTRCEMLQHNLAVLRKSNAIC-----VHASYLLVMHD------LQQDVVFIDPPWGGPEYKDLAK------VDLFLDDTPLYDVC-KQLHGRAKVVALKVPTNFDADKFAEHV--PGKVSVR-KDFHKMHLVVIDF 452
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Match: K3WXR2_GLOUD (Trimethylguanosine synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXR2_GLOUD) HSP 1 Score: 110 bits (274), Expect = 3.860e-21 Identity = 87/229 (37.99%), Postives = 116/229 (50.66%), Query Frame = 1
Query: 1564 LFPNMSPWRRDRLRFDEESLWSITDQNTAAKISDITLTL--------PGVWTSTV-------VVDGTACVGGNAISFASTFDEVWAVEIDEERFVLLKGNVKKAAGSTPGCRRVRFFNADFLKVLETERETIGAKQPVVFLDPPWGGVHYKKHVRPCLRDVVDLFLSGTPLADVCGRAAAAGARHVLLKVPTNFNITGFRDAVGSAGRVTVHHRNMRKMLLVAIDYELE 2205
F N+ R +L+ D+ + +S+T+ +A KIS+ L L P S+V + D TAC+GGN ISF F V AVE D R +L+ N+ + C +A +L V+E R Q VVF+DPPWGG YK + VDLFL PL DVC R A+ V+LKVPTNF+ F V G VTV +++ KM LVAID+ E
Sbjct: 328 FFRNLDFETRSQLQIDDVAGFSVTEHESATKISEAILALFTSDDKWWPENPASSVREKFPLTITDATACIGGNTISFCDYFTHVNAVECDLIRCQMLQHNLGVLKKTNIAC-----IHASYLVVIEFLR------QDVVFIDPPWGGPEYKDLAK------VDLFLDDIPLYDVC-RMLYGLAKVVVLKVPTNFDTEKFAQHV--PGIVTVR-KDLNKMHLVAIDFRSE 535 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8916.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8916.1.1 >prot_A-nodosum_M_contig8916.1.1 ID=prot_A-nodosum_M_contig8916.1.1|Name=mRNA_A-nodosum_M_contig8916.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1021bp MTSWVVQVCSPMIRGVVSGGGSDRKLEAPPSSEKGKSSKPPALLRPQDISback to top mRNA from alignment at A-nodosum_M_contig8916:847..8079- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8916.1.1 ID=mRNA_A-nodosum_M_contig8916.1.1|Name=mRNA_A-nodosum_M_contig8916.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7233bp|location=Sequence derived from alignment at A-nodosum_M_contig8916:847..8079- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8916:847..8079- >mRNA_A-nodosum_M_contig8916.1.1 ID=mRNA_A-nodosum_M_contig8916.1.1|Name=mRNA_A-nodosum_M_contig8916.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3063bp|location=Sequence derived from alignment at A-nodosum_M_contig8916:847..8079- (Ascophyllum nodosum dioecious)back to top |