mRNA_A-nodosum_M_contig890.1.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE) HSP 1 Score: 755 bits (1950), Expect = 2.620e-253 Identity = 424/792 (53.54%), Postives = 537/792 (67.80%), Query Frame = 3
Query: 378 ISTVTVDAPLYDTRLRADNGCNPAGCSGDLTTDGDRETPDSRWSCSPSLGSAGSTCSIIYGLSDPQFIQAINIALYRGDERTRTIDIYVDGVIVTTWTSSGTTSDFETVTLGVT--GSTIELRGVLGNSEFLSILEVEILIIPDGATLP------PAPAP-TSTGTLEPVGLIPLASS---HGNSRDRFLAKDNDMSTSWTCNGSTTRSGECDIQFSLFWFRHIKQVKIALSNGEDAAIDMTIGNTRFADNPH----EVAVTSSGTTTAFETYEFDVFTDRIAISTSFGSSDESISIAEVEFVEELQAGEIPVESFRPPFDSEGGTTDDVAPDGFEWWSGSDEALGEELHFRLGIWAELTAVLLQFPTGDTYLFDLHLFTEADGGREPFTTITGLESEDTAGWQTFDLQ--LDADQTVTEVSLVIRGTGSGASGFHLQNAGFMGTRVDNPTDTFYVGTTHIEFWG--SPLYPDFVGEGTSDQEAIMGAICAVKKASFDGIDCVGEDPAATGTVSLPLGDYFVDGNIFMKSGVTLDGDNAEDRPSETYIFLEDGAAGNTAIDAIIVVDGVTDAVIDEVWVGGLYDPETSNAISAVAGLGTTAISITNSQNIVYSFGWVENVDGDAIVIRDSQMVSIDAGRFDEEILPNRIASSRGIGLLVDTCENVSVRRHAIYDNGVAGIHIVDTTDFTFEATFDRFLEEGDGYVGSVDGQQPIEVIVESSHRVTFQNMDVRSANDPVMTVSADSSEVIFNDNGFGRVASGTCVIQAEDPSVVT--AEDDELMLVGSCYVKV 2687
I VT A L+D L ADNGC+P+GC+ LT DGD T SRWSC+P LG G +C+I Y L + I +A+Y+GDER T ++ VDGV+VTTWTSSGTT E++ T G +E+ GVLG+SE+LSI+E I + PD A P PAPAP T G L VGL+PLA G F +KD D STSWTC G T EC ++F LF +RHIKQVKIAL +G + A+DM I R+ D E VTSSGTT FETY+FDVFT+ I IS F S+ ++ISI+EVEF+EELQAGEI + + P D D F+W + SD+A+G + F L +A + AV ++FP GDTY FDL L + G E TITG ES DTA WQ+FDL LDADQ +TE+++V++GTGSGA GF + + MGT +DNPTDT YVG+T IE W + YPDFV EGT DQ+ IM AIC VKKASFDG+DCVG D AATGTV LP G ++VDGNIFMKSGV LDG +ED P T I LE+GAAG T IDA++V+DG+++A+ D +W+ G YDP+TSN AV GLG+T +S+ S NI + +DGDA+V+RDS M+SIDAG ++E P +ASSRG GL+VD+C+++ VRRH +Y+NGVAGIHIV T +FTF+AT G+G VG++DGQQPI+VI+ESS VTF ++ V+S+NDP+M VS DSS V FN+ G V + CVIQA+DPS VT A++DEL L GSCYVKV
Sbjct: 373 IGAVTTTATLFDPSLLADNGCDPSGCTAGLTRDGDYAT-SSRWSCAPKLGGDGDSCTISYDLGQVYNLAQIRLAMYKGDERQVTAEVRVDGVLVTTWTSSGTTVGAESILFSDTTSGQVVEVTGVLGDSEWLSIIETLIYVWPDTAPTPSTTGSTPAPAPITPVGELTAVGLLPLADCTGCFGEDLPPFHSKDGDFSTSWTCVGGT----ECTLRFDLFSWRHIKQVKIALPDGAERAVDMRIAG-RYDDELAAAFAEAYVTSSGTTDEFETYDFDVFTNEILISGVFTSASQTISISEVEFMEELQAGEIQISEWNTPLAD--ARVDGPTTDAFDWTTDSDDAIGRTVEFELAWYAMVDAVEIKFPVGDTYKFDLELNDDQIRG-EILKTITGFESADTADWQSFDLSQHLDADQFLTEINIVVQGTGSGAPGFAMLDIRVMGTAIDNPTDTVYVGSTFIERWTGLTDRYPDFVAEGTGDQKIIMEAICTVKKASFDGVDCVGGDDAATGTVVLPQGSWYVDGNIFMKSGVFLDGSFSEDSPYFTGIILEEGAAGKTDIDAMVVMDGISNAMTDNIWIRGHYDPDTSNDTPAVPGLGSTGLSVVGSTNITLRDAEIRFLDGDALVVRDSNMISIDAGEYEELYSPWSLASSRGTGLIVDSCDSIYVRRHTLYENGVAGIHIVGTNNFTFDATIGEESTVGEGNVGNLDGQQPIDVIIESSTLVTFNDLRVQSSNDPIMMVS-DSSTVSFNNLGLSLVEADACVIQADDPSTVTIDADEDELTLDGSCYVKV 1154
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI) HSP 1 Score: 751 bits (1939), Expect = 9.960e-252 Identity = 425/802 (52.99%), Postives = 541/802 (67.46%), Query Frame = 3
Query: 378 ISTVTVDAPLYDTRLRADNGCNPAGCSGDLTTDGDRETPDSRWSCSPSLGSAGSTCSIIYGLSDPQFIQAINIALYRGDERTRTIDIYVDGVIVTTWTSSGTTSDFETVTL-GVTGSTIELRGVLGNSEFLSILEVEILIIPDGATLPPAPAPTS-------------------TGTLEPVGLIPLASSHGNSRDRFLAKDNDMSTSWTCNGSTTRSGE----CDIQFSLFWFRHIKQVKIALSNGEDAAIDMTIGNTRFADNPHEVAVTSSGTTTAFETYEFDVFTDRIAISTSFGSSDESISIAEVEFVEELQAGEIPVESFRPPFDSEGGTTDDVAPDGFEWWSGSDEALGEELHFRLGIWAELTAVLLQFPTGDTYLFDLHLFTEADGGREPFTTITGLESEDTAGWQTFDLQLDADQTVTEVSLVIRGTGSGASGFHLQNAGFMGTRVDNPTDTFYVGTTHIEFWGSPLYPDFVGEGTSDQEAIMGAICAVKKASFDGIDCVGEDPAATGTVSLPLGDYFVDGNIFMKSGVTLDGD-NAEDRPSETYIFLEDGAAGNTAIDAIIVVDGVTDAVIDEVWVGGLYDPETSNAISAVAGLGTTAISITNSQNIVYSFGWVENVDGDAIVIRDSQMVSIDAGRFDEEILPNRIASSRGIGLLVDTCENVSVRRHAIYDNGVAGIHIVDTTDFTFEATF------DRFLEEGDGYVGSVDGQQPIEVIVESSHRVTFQNMDVRSANDPVMTVSADSSEVIFNDNGFGRVASGTCVIQAEDPSVVTAEDD-ELMLVGSCYVKV 2687
+ +VTV A LYD L D GC+P+GC D T DGD SRWSC+P LG CSI Y L + + +A+++G ER T+++ VD +V TWTSSGTT FE + + G +G +E+ GVL +SE+LSI+E EI+++ DGA+ P PT+ TGTL+PVGLIPLAS+ G S +++ KD DMSTSWTC+G + + C +QF++F RHIKQVKIAL +G + A+DM I A + EV VTSSGTT FET+EFD FTD ++I+ F S +SISI+EVEFVEE+Q GE+ V F P+D+ G D FEW S SDEA+ L F L +A + AV LQFP G+TY F+L L+ D G E +T TGLES D+ GWQ F+L D VTEV+++++GTGSGA GF L NA F+GT +DNP++TFYVG+T++E W S YPDFV EGT DQ+AIMGAICAVKKASFDG+DCVG D AATG VS+P+G++FVDGNIFMKSGV LD + +D P T I LEDGAAG T AIIV+DG++DA + EVW+ G YD ETSN AV GLG+ +SIT S NI + V + DGDA+V+RDS+MV+IDAG +DEE P I SRG G++VD+ ++V +RR+ DNG+AGIH+ + +FTFEAT D + EG+G VGS+DGQQPIEVIVESS V FQ+M V+S NDPVMTVS SS V F++ GF V SGTCVIQ + S VT DD EL L G+CYVKV
Sbjct: 362 LGSVTVGASLYDPSLAVDGGCDPSGCVADNTRDGDLSAA-SRWSCAPKLGGE---CSISYDLGTAYDLDEVRLAMFKGTERQVTMEVRVDDALVITWTSSGTTDGFEAIDMSGTSGQVLEITGVLDDSEWLSIIEAEIMLLEDGAS----PTPTTXXXXXXXXXXXXXXXXXSTTGTLQPVGLIPLASTGGTSLEKYHIKDGDMSTSWTCSGDPQEADDPYYDCILQFNMFSHRHIKQVKIALPDGAERAVDMRIAAPYDA-SFGEVFVTSSGTTDGFETFEFDYFTDVVSIAGVFTSGGQSISISEVEFVEEIQDGEVSVVDFDAPYDNGDGLWTGATTDAFEWSSESDEAMDRTLSFVLNSYALMEAVELQFPVGETYKFELTLY---DDGDEIVSTFTGLESVDSEGWQRFELGT-IDDPVTEVTIIMKGTGSGAPGFKLANARFLGTAIDNPSNTFYVGSTYVESWRSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVYLDASFSIDDSPYTTDIILEDGAAGKTDTAAIIVMDGISDARLSEVWIYGHYDSETSNDTPAVDGLGSVGLSITGSTNITCRYASVYSSDGDALVVRDSEMVNIDAGPYDEEYRPWTIGQSRGTGIVVDSSDSVWIRRYTTSDNGIAGIHVSGSNNFTFEATIADECWTDDCVLEGEGNVGSLDGQQPIEVIVESSTLVKFQDMKVQSVNDPVMTVSG-SSGVSFDNCGFSNVESGTCVIQTDATSEVTTGDDPELSLDGTCYVKV 1149
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE) HSP 1 Score: 728 bits (1879), Expect = 1.380e-242 Identity = 400/799 (50.06%), Postives = 529/799 (66.21%), Query Frame = 3
Query: 381 STVTVDAPLYDTRLRADNGCNPAGCSGDLTTDGDRETPDSRWSCSPSLGSAGSTCSIIYGLSDPQFIQAINIALYRGDERTRTIDIYVDGVIVTTWTSSGTTSDFETVTLGVT--GSTIELRGVLGNSEFLSILEVEILIIPDG---------ATLPPA---------PAPTSTGTLEPVGLIPLASSHGNSRDRFLAKDNDMSTSWTCNGSTTRSGE-------CDIQFSLFWFRHIKQVKIALSNGEDAAIDMTIGNTRFADNPHEVAVTSSGTTTAFETYEFDVFTDRIAISTSFGSSDESISIAEVEFVEELQAGEIPVESFRPPFDSEGGTTDDVAPDGFEWWSGSDEALGEELHFRLGIWAELTAVLLQFPTGDTYLFDLHLFTEADGGREPFTTITGLESEDTAGWQTFDLQLDADQTVTEVSLVIRGTGSGASGFHLQNAGFMGTRVDNPTDTFYVGTTHIEFWGSPLYPDFVGEGTSDQEAIMGAICAVKKASFDGIDCVGEDPAATGTVSLPLGDYFVDGNIFMKSGVTLDGDNAEDRPSETYIFLEDGAAGNTAIDAIIVVDGVTDAVIDEVWVGGLYDPETSNAISAVAGLGTTAISITNSQNIVYSFGWVENVDGDAIVIRDSQMVSIDAGRFDEEILPNRIASSRGIGLLVDTCENVSVRRHAIYDNGVAGIHIVDTTDFTFEATF-DRFLEEGDGYVGSVDGQQPIEVIVESSHRVTFQNMDVRSANDPVMTVSADSSEVIFNDNGFGRVASGTCVIQAEDPSVVT--AEDDELMLVGSCYVKV 2687
+TVT A L+D L DNGC+PAGC+G LT DGD T SRW+C+PSLG C I Y L + + +ALY GD R RTI+++VDG +VTTWTSSGTT+ FE++ L T G+ +EL+GVL +SE+LSI+E EI++ P AT+PPA P+P L+PVGL PLA + + DR+ KD D +TSWTC G T + C++ F L ++RH+KQVK+AL++G + ++DM + RF+ + E VTSSGTT FETY+FD I I+ F S ESISI+EVE +EE+ GE P++ F P+D+ G ++ DGFEW S S+EA+ + L L + +T + L FP GDTY FD+ LF DG E +TTITGLES A+Q VT + + ++GTGSGA GF + +A +GT++DNP+DTF+VG+T IE+WG YPDFVG G+ DQ AI GAIC VKK ++DG++CV D ATGTV L G Y+V+GNIFM+SGV L G +D P T I LE+GA GNT IDAI+V+DG+ DA I++VW+ G YDPET + ISAV+GLG+ +S+ NSQNI + GDA+V+RDS +V+IDAGR+DEE LP I S G GL+VDT +++ VRR Y+N VAG+HI+ + +FTFEAT EG+G VGSVDGQQPIEVIV +S VTFQ+M V+S NDPVMT++ DS+ V F + G+ V SGTC IQ +DPS VT A++DEL+L G+CYVKV
Sbjct: 371 TTVTTTADLFDPDLAVDNGCDPAGCTGALTRDGDM-TDTSRWACAPSLGGV---CFISYDLGREFGLDEVRVALYNGDIRVRTINVFVDGALVTTWTSSGTTNGFESIALPDTASGTVVELQGVLDDSEWLSIIETEIMVWPQNVVTPPPAPAATVPPATAPVQPVTPPSPLPAADLQPVGLTPLAIGNESPLDRYATKDGDFTTSWTCTGDPTEPNDEGITYYQCELFFGLVYYRHVKQVKVALADGAERSVDMRLAG-RFSSSIAEEFVTSSGTTNGFETYDFDYKASYIRIAAVFSSPGESISISEVEIMEEVVEGEAPIDIFSTPYDNGDGLWNEPTTDGFEWSSNSNEAIDQSLTLSLAGYHTVTELQLMFPEGDTYKFDVTLFNNLDGTGEAYTTITGLESXXXXXXXXXXXXXXANQYVTSIGIEMKGTGSGAPGFAMLDALVLGTKIDNPSDTFHVGSTFIEYWGGDGYPDFVGSGSGDQNAINGAICGVKKGTYDGVNCVDVDDTATGTVDLSWGAYYVNGNIFMQSGVLLLGSFGDDDPHTTDIVLEEGAEGNTDIDAIVVMDGIRDAWIEKVWIQGNYDPET-DGISAVSGLGSACLSVVNSQNITCEGVDIRYCSGDALVVRDSTLVNIDAGRYDEEYLPWTIGLSGGTGLIVDTSDSIWVRRTTFYENAVAGLHIMGSNNFTFEATIASEEGSEGEGNVGSVDGQQPIEVIVGTSSLVTFQDMKVQSVNDPVMTIT-DSTTVSFTNGGYSNVPSGTCTIQTDDPSTVTIDADEDELVLEGTCYVKV 1162
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE) HSP 1 Score: 714 bits (1844), Expect = 5.470e-240 Identity = 409/804 (50.87%), Postives = 537/804 (66.79%), Query Frame = 3
Query: 378 ISTVTVDAPLYDTRLRADNGCNPAGCSGDLTTDGDRETPDSRWSCSPSLGSAGSTCSIIYGLSDPQFIQAINIALYRGDERTRTIDIYVDGVIVTTWTSSGTTSDFETVTL-GVTGSTIELRGVLGNSEFLSILEVEILIIPDGAT-LPPAPAP--------------TSTGTLEPVGLIPLASSHGNSRDRFLAKDNDMSTSWTCNGSTTRSGE----CDIQFSLFWFRHIKQVKIALSNGEDAAIDMTIGNTRFADNP--HEVAVTSSGTTTAFETYEFDVFTDRIAISTSFGSSDESISIAEVEFVEELQAGEIPVESFRPPFDSE----GGTTDDVAPDGFEWWSGSDEALGEELHFRLGIWAELTAVLLQFPTGDTYLFDLHLFTEADGGREPFTTITGLESEDTAGWQTFDLQLDADQTVTEVSLVIRGTGSGASGFHLQNAGFMGTRVDNPTDTFYVGTTHIEFWGSPLYPDFVGEGTSDQEAIMGAICAVKKASFDGIDCVGEDPAATGTVSLPLGDYFVDGNIFMKSGVTLDG-DNAEDRPSETYIFLEDGAAGNTAIDAIIVVDGVTDAVIDEVWVGGLYDPETSNAISAVAGLGTTAISITNSQNIVYSFGWVENVDGDAIVIRDSQMVSIDAGRFDEEILPNRIASSRGIGLLVDTCENVSVRRHAIYDNGVAGIHIVDTTDFTFEATF------DRFLEEGDGYVGSVDGQQPIEVIVESSHRVTFQNMDVRSANDPVMTVSADSSEVIFNDNGFGRVASGTCVIQAEDPSVVTAEDD-ELMLVGSCYVKV 2687
+ +VT A YD RL D GC+P+GC D T DGD T SRWSC+P+LG C+I Y L + + +A+++G ER ++ + VD +VTTWTSSGTT FE + L G G +E+ GVL +SE+LSI+E EI+++ DGA+ +P P ++TGTL+PVGLIPLAS+ G S +R+ KD DMSTSWTC+G+ + + C +QFS+F R+IKQVKIAL +G + A+DM I +++ E+ VTSSGTT FETY+FD FT+ ++I+ F SS +SISI+EVEFVEE+Q GE+ V F P+ + G TTD F W S SD A+ E+L F L +A + AV LQFP G+TY F+L L+ + D E +T TG ES D+ GWQ F+L D VTE+++V++GTGS A GF L NA F GT +DNP+DTFYVG+T++ W S YPDFV EGT DQ+AIMGAICAVKKASFDG+DCVG D AATG VS+P+G++FVDGNIFMKSGV L + +D P T I LEDGAAG T A+IV+D +++A + W+ G YD ETSN V GLG+ +SIT S NI V + DGDA+V+RDSQM++ID+G +D++ LP I SRG G++VD+ ++V VRR+ YDNGVAGIH+ + +FTFEAT + + EG+G VGS+DGQQPIEV+VESS V FQ+M V+S NDPV+ VS SS V F++ GF V +GTCVIQ + S VT DD EL L G+CYVKV
Sbjct: 175 LGSVTAGASFYDPRLAVDGGCDPSGCVVDNTRDGDLSTA-SRWSCAPTLGGE---CTISYDLGTAYDLDELRLAMFKGTERQVSMKVRVDDALVTTWTSSGTTDGFEAIDLSGTWGQVLEITGVLDDSEWLSIIEAEIMVLEDGASPMPTTPXXXXXXXXXXXXXXXTSTTGTLQPVGLIPLASTGGTSLERYHVKDGDMSTSWTCSGNPQETADTSYDCILQFSMFCHRNIKQVKIALPDGAERAVDMRIAAPYSSNSASFEEIFVTSSGTTDGFETYDFDHFTNYVSIAGVFTSSGQSISISEVEFVEEIQDGEVSVVDFETPYYGDALWPGATTD-----AFVWASESDAAIDEKLSFVLKSYAVMEAVELQFPIGETYKFELTLYDDED---EIVSTFTGFESVDSEGWQRFELGT-IDDPVTEIAIVMKGTGSEAPGFKLANARFFGTAIDNPSDTFYVGSTYVTEWNSDRYPDFVAEGTGDQKAIMGAICAVKKASFDGVDCVGGDDAATGEVSMPMGEWFVDGNIFMKSGVHLHAWFSIDDSPYTTDIILEDGAAGKTDTAAMIVMDNISNARLSNTWIIGNYDSETSNDTPTVHGLGSVGLSITGSTNITCIDASVYSSDGDALVVRDSQMINIDSGPYDDDYLPWTIGQSRGTGIVVDSSDSVWVRRYTTYDNGVAGIHVSGSNNFTFEATIADKCWGEDCVLEGEGNVGSLDGQQPIEVVVESSTLVKFQDMKVQSVNDPVIVVSG-SSGVSFDNCGFSNVETGTCVIQTDTTSEVTTGDDPELSLDGTCYVKV 964
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI) HSP 1 Score: 594 bits (1531), Expect = 2.520e-193 Identity = 365/799 (45.68%), Postives = 468/799 (58.57%), Query Frame = 3
Query: 381 STVTVDAPLYDTRLRADNGCNPAGCSGDLTTDGDRETPD-SRWSCSPSLGSAGSTCSIIYGLSDPQFIQAINIALYRGDERTRTIDIYVDGVIVTTWTSSGTTSDFETVTL--GVTGSTIELRGVLGNSEFLSILEVEILIIPDGATLPP-----------------APAPTSTGTLEPVGLIPLASSHGNSRDRFLAKDNDMSTSWTCNGSTTRSG-------ECDIQFSLFWFRHIKQVKIALSNGEDAAIDMTIGNTRFADNPHEVAVTSSGTTTAFETYEFDVFTDRIAISTSFGSSDESISIAEVEFVEELQAGEIPVESFRPPFDSEGGTTDDVAPDGFEWWSGSDEALGEELHFRLGIWAELTAVLLQFPTGDTYLFDLHLFTEADGGREPFTTITGLESEDTAGWQTFDLQLDADQTVTEVSLVIRGTGSGASGFHLQNAGFMGTRVDNPTDTFYVGTTHIEFWGSPLYPDFVGEGTSDQEAIMGAICAVKKASFDGIDCVGEDPAATGTVSLPLGDYFVDGNIFMKSGVTLDGD-NAEDRPSETYIFLEDGAAGNTAIDAIIVVDGVTDAVIDEVWVGGLYDPETSNAISAVAGLGTTAISITNSQNIVYSFGWVENVDGDAIVIRDSQMVSIDAGRFDEEILPNRIASSRGIGLLVDTCENVSVRRHAIYDNGVAGIHIVDTTDFTFEATFDRFLEEGDGYVGSVDGQQPIEVIVESSHRVTFQNMDVRSANDPVMTVSADSSEVIFNDNGFGRVASGTCVIQAEDPSVVTAE--DDELMLVGSCYVKV 2687
+TVT A L+D L DNGC+PAGC+ LT DGD T D SRWSC+ +LG G+ CSI Y L + + +ALY GD R RTID+ VDGV+V TWTSSGTT FE++ GV+G+ I L+GVL +SE+LSI+E EI++ P PP +P PT G L+PVGLIPLA+ G+ DR AKD D+STSWTC G EC + F L + RHIKQVKIAL++G + A+DM+I + P E+ VTSSGTT ETY+ D T + IS F S +SISI+EVEFVEE+ GE+ +E+ FD ++W F+L LF G EP+ T+TGLE TA +Q+ DL A Q VT +++ + G SG S F L +A +GT++DNPTDTFYVG+T I W PDFVG+GT DQ AI AICAVKK ++DG+DCVG D +ATGTV L G+Y VDGNIFMKSGV L G +D P IFLE+GA GNT +DA+IV+DG++DA I ++W+ GLYDP+TSN AV GLG+T +SI +SQNI + WV+ DGDA+V+R S +V+IDAG +DE + G + + IY G VGS++GQQPIEVIVE S + FQ M VRS NDPVMT+S DS+ V F ++G VASGTC+IQ +DPS VT + +DEL+L G+CYVKV
Sbjct: 249 TTVTTTADLFDPALAIDNGCDPAGCTAALTRDGD--TGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIETEIMVWPQNVVTPPPTPATTAXXXXXQPATTSPIPTPVGDLQPVGLIPLATGDGSLLDRCAAKDGDLSTSWTCTGDPREVSPQGILYYECSLLFDLVYTRHIKQVKIALADGAERAVDMSISR-GYGTTPEEL-VTSSGTTDGLETYDVDYRTSSVRISGDFSSPGQSISISEVEFVEEVVDGEVLLETSY--FDD------------YDW-----------------------------------NFELSLFNRIGGTDEPYATLTGLEITGTAEYQSIDLTGFAGQYVTSIAVHVEG--SGGSEFPLIDARILGTKIDNPTDTFYVGSTFIPEWYGHGDPDFVGQGTGDQNAINAAICAVKKGTYDGVDCVGMDDSATGTVVLAFGEYHVDGNIFMKSGVFLKGRYRFDDSPYNIDIFLEEGAPGNTDVDAMIVMDGISDARIGDLWIHGLYDPDTSNDSPAVPGLGSTGVSIVDSQNITCADTWVDFCDGDAMVVRSSSVVNIDAGYYDEY-------KATGWRVCTSWTPTTLPSKPPIYVGS-------------------------QGQVGSLEGQQPIEVIVEGSSLINFQEMWVRSVNDPVMTIS-DSTAVSFTNDGSYSVASGTCIIQTDDPSTVTIDPDEDELILEGTCYVKV 959
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: D7FUI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI8_ECTSI) HSP 1 Score: 256 bits (655), Expect = 1.340e-71 Identity = 204/562 (36.30%), Postives = 281/562 (50.00%), Query Frame = 3
Query: 1080 RFADNPHEVAVTSSGTTTAFETYEFDVFTDRIAISTSFGSSDESISIAEVEFVEELQAGEIPVESFRPPFDSEGGTTDDVAPDGFEWWSGSDEALGEELHFRLGIWAELTAVLLQFPTGDTYLFDLHLFTEADGGREPFTTITGLESEDTAGWQTFDLQLDADQTVTEVSLVIRGTGSGASGFHLQNAGFMGTRVDNPTDTFYVGTTHIEFWGSPLYPDFVGEGTSDQEAIMGAICAVKKASFDGIDCVGEDPAATGTVSLPLGDYFVDGNIFMKSGVTLDGDNAEDR----PSETYIFLEDGAAGNTAIDAIIVVDG--VTDAVIDEVWVGGLYDPETSNAISAVAGLGTTAI--------SITNS-QNIVYSFGWVENVDGDAIVIRDSQMVSIDAGRFDEEI---------LPNRIASSRGIGLLVDTCENVSVRRHAIYDNGVAGIHIVDTTDFTFEATFDRFLEEGDGYVGSVDGQQPIEVIVESSHRVTFQNMDVRSANDPVMTVSADSSEVIFNDNGFGRVASGTCVIQAEDPSVVT--AEDDELMLVGSCYVKV 2687
RF E V SSGTT FETY+FD + I+ F S E ISI+E + DGFEW S S+EA+ L L + ++ + H GR G+ AG+Q+FDL ADQ VT + + ++GTGSGA GF + + +G ++DNP+DTFYVG+T IEFW PDFVG G+ DQ AI GAICAVKK +FDG+DC+ D ATGTV L +V + S +L ++ +R P E I + G + D V+ + + + S ++ ++ + S+ N+ QN+ + GDA+V+RDS +VSIDAGR+DE P + SR +GL + + +V+ +R G + H ++ F + R EG G VGSVDGQQPIEVIVESS V FQ+ V+S NDPVMT++ DS+ V F + G+ V SGTC IQA+DPS VT A++DEL+L G+CYVKV
Sbjct: 6 RFTSWIAEEFVMSSGTTDGFETYDFDYKASSVRIAAVFSSPGEFISISE-----------------------------EPTTDGFEWSSDSNEAISRTLFLSLAGY---------------FMAERH-------GR-------GVHDHH-AGFQSFDLTGFADQYVTSIGIEMKGTGSGAPGFAVLDPMVLGAKIDNPSDTFYVGSTFIEFWSGNGLPDFVGTGSGDQNAINGAICAVKKGTFDGVDCIDMDETATGTVDLS----WVRTSWTATSSCSLAFSSSANRRRVDPRELSSRDRHRQQSRRIWPRIDLPLGCELPDFVVARLTLMEMPVTAFSASLHSLPKASLCLVPSVPPLHRSMPNTLQNVTCEGVDIRYCSGDALVVRDSTLVSIDAGRYDEHEGVPSVDYRPKPRHRSDSRHVGLRLSSPAHVTRQRR-----GGSPHHGLE--QFYLRSNHRRG-PEGAGNVGSVDGQQPIEVIVESSSLVKFQDKPVQSVNDPVMTIT-DSTTVSFTNGGYSNVPSGTCTIQADDPSTVTIDADEDELVLEGTCYVKV 495
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: A0A6H5JDS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS6_9PHAE) HSP 1 Score: 171 bits (432), Expect = 1.200e-39 Identity = 169/599 (28.21%), Postives = 268/599 (44.74%), Query Frame = 3
Query: 906 FLAKDNDMSTSWTCN----GSTTRSGECDIQFSLFWFRHIKQVKIALSNGEDAAIDMTIGNTRFADNPHEV--AVTSSGTTTAFETYEFDVFTDRIAISTSFGSSDESISIAEVEFVEELQA----GEIPVESFRPPFDSEGGTTDDVAPDGFEWWSGSDEALGEELHFRLGIWAE----------LTAVLLQFPTGDTYLFDLHLFTEADGGREPFTTITGLESEDTAGWQTFDLQLDADQTV-TEVSLVIRGTGSGASGFHLQNAGFMGTRVDNPTDTFYVG--TTHIEFWGSPLYPDFVGEGTSDQEAIMGAICAVKKASFDGIDCVGEDPAATGTVSLPLGDYFVDGNIFMKSGVTLDGDNAEDRPSETYIFLEDGAAGN-TAIDAIIVVDGVTDAVIDEVWVGGLYDPETSNAISAVAGLGTTAISITNSQNIVYS-FGWVENVDGDAIVIRDSQMVSIDAGRFDEEILPNRIASSRGIGLLVDTCENVSVRRHAIYDNGVAGIHIVDTTDFTFEATFDRFLEEGDGYVGSVDGQQPIEVIVES-SHRVTFQNMDVRSANDPVMTVSADSSEVIFNDNGFGRVASGTCVIQAED 2624
F KD +M + WTC GS S +CD++FSL +FR+I+Q++IA G+ + +I A V + SS + ++T++ V T+ I + FG + I I E+ F+E+ + G IPV S R S DD DG +D + F L I +TA+ ++FP +++F E DG E FT+ G ++ W+TF L A+ EV V T + + + + Y+ TT IE WG + PD +GEG S+Q+ +M AIC K ++FDGIDCVGE + T+ L GDY++DG IF+KSGV +DGD ++ P+ ++ L DG + T DA++VVDG T A + + DP T + + +G T +++ NSQ+I +S G +G A M + I N G + + ++V R ++G+ I D FE + + G Q V+V S + FQN V + +P + V + + N + G C+++ +
Sbjct: 392 FYIKDENMDSRWTCGPLVAGSDRNSWDCDLEFSLNYFRYIRQIQIAFYTGDGEHNEFSIEAYTAAGEWVTVVPSAISSEDGSDYQTFDVAVHTNMIRLLPKFGQITDFIGIKELVFLEKRKKDFIEGTIPVFSTRIRSTS----NDDEEEDG------ADVDIPTRFEFDLQIEGNYIDMNVPPSTVTALRMRFPADRSFVF----MVEYDGIVEEFTSAGGPKT-----WETFTLSTPAEVDFGLEVVAVTGPTFDHIPDYPALRVVDLQVVGELRKEPGYIDVVTTTIETWG--VVPDVIGEGVSEQKTVMKAICEAKGSTFDGIDCVGELDDSEVTIKLQFGDYYIDGPIFLKSGVFIDGDWKDEYPTFCWLVLYDGDSNTVTGEDAMVVVDGATGAELYGLAFVRKEDP-TGDIVPGT--VGNTNLAVRNSQDIRFSEMGLFSGRNGGATFTDSRNMSAF--------IFYNGDGLETGNYMELTRVDDVHFRALP----NMSGVLIDTCNDIVFEGVDEFAIPSAYFSPPVAGGDQTANVVVTGDSSGIVFQNFIVAAGAEPRILVESTEPLTLDNVIRYTDAEIGDCIVEVPE 954
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI) HSP 1 Score: 162 bits (409), Expect = 3.500e-38 Identity = 119/301 (39.53%), Postives = 167/301 (55.48%), Query Frame = 3
Query: 378 ISTVTVDAPLYDTRLRADNGCNPAGCSGDLTTDGDRETPDSRWSCSPSLGSAGSTCSIIYGLSDPQFIQAINIALYRGDERTRTIDIYVDGVIVTTWTSSGTTSDFETVTLGVTGSTIELRGVLGNSEFLSILEVEILIIP--DGATLPPAPAP-----TSTGTL------EPVGLIPLASSHGNSRDRFLAKDNDMSTSWTCNGSTTRSGECDIQFSLFWFRHIKQVKIALSNGEDAAIDMTIGNTRFADNPHEVAVTSSGTTTAFETYEFDVFTDRIAISTSFGSSD-ESISIAEVEFV 1238
++ VT +AP++D R GC PAGC G T DG + +SRWSC+PSL S+ S C+I Y L D Q ++A+ IALY+GD RTRTIDI VDG +WTSSGTTSDFE++ LGV G +EL G L + E+LSILEVEIL+ DG+ + A T+T L + VG P + +RD +++D + W+C + G C I + L I ++++A+ G+ T+G D TSSGTT+ FE+ + T ++ T SD E +SI E E +
Sbjct: 31 LTGVTTEAPVFDDRATLPYGCPPAGCVGANTRDG-ITSDESRWSCAPSLDSSDSGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGNYAFSWTSSGTTSDFESIDLGVDGKVVELVGDLQDWEWLSILEVEILVDDGDDGSEVDVVEAGELGTVTATADLYDDRLGDTVGCDPEGCTAALTRDGDMSED----SRWSC--APELGGLCSISYDLGAEYSIDELQLAMYQGDTRV--RTVGVA--VDGDLVTTWTSSGTTSGFESVDMSGATGQVVTITGAELSDSEWLSIVETEIM 320
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: D7FSQ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ6_ECTSI) HSP 1 Score: 159 bits (403), Expect = 3.720e-36 Identity = 212/785 (27.01%), Postives = 337/785 (42.93%), Query Frame = 3
Query: 465 LTTDGDRETPDSRWSCSPSLGSAGSTCSIIYGLSDPQFIQAINIALYRGDERTRTIDIYVDGVI-VTTWTSSGTTSDFETVTLGVTGSTIELRGVLGNSEFLSILEVEI----LIIPDGATLPPAPAP----TSTGTLEPVGLIPLA-----SSHGNSRDR------------------FLAKDNDMS--TSWTCN----GSTTRSGE-CDIQFSLFWFRHIKQVKIALSNGEDAAIDMTIGNTRFADNPHEVAVTS---SGTTTAFETYEFDVFTDRIAISTSFGSSDESISIAEVEFVEELQAGEI----PVESFRPPF-------DSEGGTTDDVAPDGFEWWSGSDEALGEELHFRLGIWAELTAVLLQFPTGDTYLFDLHLFTEADGGREPFTTITGLESEDTAGWQTFDLQLDADQT----VTEVSLVIRGTGSGASGFHLQNAGFMGTRVDNPTDTFYVGTTHIEFWGSPLYPDFVGEGTSDQEAIMGAICAVKKASFDGIDCVGEDPAATGTVSLPLGDYFVDGNIFMKSGVTLDG-DNAEDRPSETYIFLEDGAAGNTAI-DAIIVVDGVTDAVIDEVWVGGLYDPETSNAISAVAGLGTTAISITNSQNIVYSFGWVENVDGDAIVIRDSQMVSIDAGRFDEEILPNRIASSRGIGLLVDTCENVSVRRHAIYDNGVAGIHIVDTTDFTFEATFDRFLEEGDG-YVGSVDGQQPIEVIVE-SSHRVTFQNMDVRSANDPVMTVSADSSEVIFNDN--GFGRVASGTCVIQAEDPS 2630
LT DGD T S W+C S G+ C I Y L + +Q + IA + +++ G V ++ SG + LG G GVL + ++ I V I+ + L AP + L+P G++PLA S H N +R + KD DMS + WTC G+ + E C + SL +FR+++Q++ A G++ + +I E V+S SG +T ++T++ +V T+ I + F D+ I I E+ +E + G I PV + F D G +D+ P FE+ E + FR+ + +TAV L+FP+ ++F + + E + E T DT +TF L AD +T VS + + + +G +P F V TT + W + PD +G+G SDQE IM IC K +FDG DCVGE ++ +S+ G YF+DG +F+KSGVTL G D + + PS TY+ L + +T + DA+IV+DGVT +D V++ P T + LG + + SQ++ + A DS+ +S+ R E G + VD ++ H VAG+ I D+ + + E ++ G Q V++ +S + FQ+ + + D V +S+E + DN G+ SG C+I S
Sbjct: 216 LTLDGDA-TDGSSWACLSSEGA----CEITYDLQAVESLQQLRIAFSTNTDAGAKLNVLAAGESGVFSYVRSGLEAGGRP--LGSDGLQT-FGGVLALARYVRIEAVPSGEGGAIVINEVELRVGDAPVRPVSEKAWLQPTGMLPLAADTGSSGHPNFDNREPSAGGCDSPAHFEGCHVYYIKDGDMSDDSRWTCGPLAAGNLVSNNEDCHLMLSLNYFRYVRQIQFAFHMGDEQYNEFSI----------ETVVSSAISSGDSTDYQTFDIEVHTNEIRLVPVFQRVDQWIGIKEMVILETKEMGFINGTLPVFDYSYWFPRGDGGDDDSSGDSDEDVPTRFEFHMPRPE---DYFQFRVPP-STVTAVKLRFPSDRQFVFRVS-YDEIETDEEIVEEFTSAGGPDTM--ETFTLSAPADVERFVYITAVSGPTFESQPDYPTLRVIDFQIVGEIKKDPGH-FEVVTTTMTVWR--VVPDIIGDGVSDQEEIMTTICETKGGAFDGTDCVGELDDSSVHISMKNGHYFLDGPVFLKSGVTLSGGDYSYNEPSRTYLVLHN----HTRLEDAVIVIDGVTGGEVDSVYIEH-QTPMTGDITPGT--LGNLCLEVRGSQDLKLAEIDCHQARTGAARFVDSKNISVSVIRDGEY--------ETGNFMEVDGVDDF----HFEGIPEVAGLRIEDSNNVVLQGGASNVYEVPTPVFLPPTGGDQAASVVITGASSGIVFQDCSIYAGGDTA-PVLMESTEPLTLDNILGYEAAESGDCIIDVPPES 952
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE) HSP 1 Score: 153 bits (387), Expect = 2.460e-35 Identity = 113/319 (35.42%), Postives = 165/319 (51.72%), Query Frame = 3
Query: 378 ISTVTVDAPLYDTRLRADNGCNPAGCSGDLTTDGDRETPDSRWSCSPSLGSAGSTCSIIYGLSDPQFIQAINIALYRGDERTRTIDIYVDGVIVTTWTSSGTTSDFETVTLGVTGSTIELRGVLGNSEFLSILEVEI-----------LIIPDGATLPPAPAPTSTGTLEPVGLIPLASSHGNSRDRFLAKDNDMS--TSWTCNGSTTRSGECDIQFSLFWFRHIKQVKIALSNGEDAA--IDMTIGNTRFADNPHEVAVTSSGTTTAFETYEFD-VFTDRIAISTSFGSSDESISIAEVEFVEELQAGEIPVESFRPP 1286
+ +VT +A ++DTR GC P GC T DGD + +SRWSC PSL ++GS CSI + L +++ I IALY+GD RTRTID+YVDG +TTWTSSGTT+ FE+V L G +EL G L + E+LSILEVEI +++ D T+T L L L +D DMS + W+C + G C I + L +++Q+++ + G+ +D+++ D TSSGTTT FE+ + + + IS S + + +SI E E + + G+ P S P
Sbjct: 30 VMSVTPEASVFDTRSTLPYGCPPDGCVAANTRDGDM-SDESRWSCRPSLDASGSGCSITFTLEKVEYLGDIRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESVLLMDQGQVVELVGDLNDDEWLSILEVEIDVDDGIVDDDTVVVLDVVEAAEMGTVTATADLYDTRLGDTVGCDPEGCTAALTRDGDMSEGSRWSC--APKLGGPCSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSV------DGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIETEIM--VYEGDAPAPSPTTP 337 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig890.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig890.1.2 >prot_A-nodosum_M_contig890.1.2 ID=prot_A-nodosum_M_contig890.1.2|Name=mRNA_A-nodosum_M_contig890.1.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=776bp MWSLLISTVTVDAPLYDTRLRADNGCNPAGCSGDLTTDGDRETPDSRWSCback to top mRNA from alignment at A-nodosum_M_contig890:7067..17004+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig890.1.2 ID=mRNA_A-nodosum_M_contig890.1.2|Name=mRNA_A-nodosum_M_contig890.1.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9938bp|location=Sequence derived from alignment at A-nodosum_M_contig890:7067..17004+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig890:7067..17004+ >mRNA_A-nodosum_M_contig890.1.2 ID=mRNA_A-nodosum_M_contig890.1.2|Name=mRNA_A-nodosum_M_contig890.1.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=2328bp|location=Sequence derived from alignment at A-nodosum_M_contig890:7067..17004+ (Ascophyllum nodosum dioecious)back to top |