mRNA_A-nodosum_M_contig89.78.3 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA) HSP 1 Score: 243 bits (621), Expect = 6.640e-70 Identity = 124/251 (49.40%), Postives = 160/251 (63.75%), Query Frame = 2
Query: 236 EWTYAETE-EGETPYGPAFWGEAFPDCYGESQSPINLSQSQHVVKNANEYELEFHPTECASTELVFSPGDHQWAVDFADCEDRPSLTFDGDHYELLNVHIHSLSEHENGGSLRDAEIHMVHVREGTSDDLLVVGVLMDVGTYGVNSKLTNLWMILDQGQEEVTDADEDFVSAPYDLLPAGPEYSHYMGSLTTPPCTEGVKWIVMTDITMLSLAQLVTFRRAMGEHD--MVSAEGHTNRPVQPLNGREVVYV 979
EWTY T G+ PYGP+ W + +PDC ++QSPI+L+ V + YEL+F+P EC S EL+F + W + F C D P + F G+ Y LL +HIHS SEH GGS AEIH VHV+EGT D LLVVGVL D YG N ++ +LW +LD G+ T E F + YD++P+ P +SHYMGSLTTPPCTEGVKWIVM+D +S QL FR ++ D V G+TNRP Q LN R++ +V
Sbjct: 41 EWTYRRTSTNGQQPYGPSDWHKGYPDCGKKAQSPIDLAADLETVVKGSAYELKFYPNECKSDELLFQADERVWEILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVEIEHLWDVLDIGE---TTTKEVFTTRIYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMSKMQLDEFRTSVALFDDSKVDEHGNTNRPGQSLNDRKIFFV 288
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI) HSP 1 Score: 238 bits (607), Expect = 7.380e-68 Identity = 123/258 (47.67%), Postives = 163/258 (63.18%), Query Frame = 2
Query: 218 DSEGTPEWTYAETEE-GETPYGPAFWGEAFPDCYGESQSPINLSQSQHVVKNANEYELEFHPTECASTELVFSPGDHQWAVDFADCEDRPSLTFDGDHYELLNVHIHSLSEHENGGSLRDAEIHMVHVREGTSDDLLVVGVLMDVGTYGVNSKLTNLWMILDQGQEEVTDADEDFVSAPYDLLPAGPEYSHYMGSLTTPPCTEGVKWIVMTDITMLSLAQLVTFRRAMGEHD--MVSAEGHTNRPVQPLNGREVVYVT 982
D E EWTY T GE PYGP W +PDC G Q+PIN++ E + F P+EC STELVF W VDF+ C D P L + G+ Y LL HIHS SEH GG+ AEIH+VH+++ T+D LLVVG++ +V YG N +L +W ++D Q+ A+E F++A Y LLPA P ++ Y GSLTTPPCTEGV+WI+M++ +S QL +RRA+ H+ VS G TNRP+Q LNGR+V+YV+
Sbjct: 40 DDEAAAEWTYRATGVVGEEPYGPDDWYLGYPDCAGTKQTPINIAADVMGTATMQEQAIAFFPSECNSTELVFKSDFAVWQVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVELEPMWNVMDLNQDI---AEEQFMAAAYSLLPATPSFTTYSGSLTTPPCTEGVRWILMSEPNYMSTWQLDNYRRAVALHEGSKVSEVGATNRPIQELNGRDVLYVS 294
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA) HSP 1 Score: 220 bits (561), Expect = 2.090e-61 Identity = 120/255 (47.06%), Postives = 153/255 (60.00%), Query Frame = 2
Query: 233 PEWTYAE-TEEGETPYGPAFWGEAFPDCYGESQSPINLSQSQHVVKNANEYELEFHPTECASTELVFSPGDHQWAVDFADCEDRPSLTFDGDHYELLNVHIHSLSEHENGGSLRDAEIHMVHVRE---GTSDDLLVVGVLMDVGTYGVNSKLTNLWMILDQGQEEVTDADEDFVSAPYDLLPAGPEYSHYMGSLTTPPCTEGVKWIVMTDITMLSLAQLVTFRR--AMGEHDMVSAEGHTNRPVQPLNGREVVYV 979
P+WTY + EGE PY P+ W +PDC G+SQSPINLS + + A E+ LE ECAS EL F H W +DF++C +L+FDG Y LL +HIHS SEH GSL DAEIH+VH R+ GT +LLV+GV +D +G N L LW +L G A V PY+L+P+ YSHYMGSLTTPPC+E V+W+VM+ T++ QL FR A + V +TNRP Q +NGR V V
Sbjct: 47 PDWTYRRASHEGERPYSPSDWEIGYPDCGGDSQSPINLSANVGTLVEATEFNLELFGAECASKELDFEANGHVWEIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNVALEPLWDVLGSG------AKPRGVINPYELIPSDMAYSHYMGSLTTPPCSEIVRWVVMSTPTVIGDLQLDIFRDSVATATNSQVDERSNTNRPGQAINGRAVYIV 295
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE) HSP 1 Score: 144 bits (364), Expect = 1.620e-36 Identity = 74/143 (51.75%), Postives = 96/143 (67.13%), Query Frame = 2
Query: 557 GGSLRDAEIHMVHVREGTSDDLLVVGVLMDVGTYGVNSKLTNLWMILDQGQEEVTDADEDFVSAPYDLLPAGPEYSHYMGSLTTPPCTEGVKWIVMTDITMLSLAQLVTFRR--AMGEHDMVSAEGHTNRPVQPLNGREVVYV 979
GGS +AEIH VHV+ GT D LLV+GVL D YG N ++ +LW +LD G+ DE FV+ YD++P+ P +SHYMGSLTTPPCTEGVKWIVM+D + QL FR A+ ++ V G+TNRP Q LN R++ +V
Sbjct: 3 GGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVEIEHLWDVLDIGKPTT---DEVFVTRVYDIMPSNPVFSHYMGSLTTPPCTEGVKWIVMSDPVTMGKMQLDEFRTSVALFDNSKVDEMGNTNRPRQSLNNRDIFFV 142
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: A0A7S3XPW5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPW5_HETAK) HSP 1 Score: 130 bits (327), Expect = 4.650e-30 Identity = 81/203 (39.90%), Postives = 116/203 (57.14%), Query Frame = 2
Query: 260 EGETPYG--PAFWGEAFPDCYGESQSPINLSQSQHVVKNANEYELEFHPTECASTELVFSPGDHQWAVDFADCEDRPSLTFDGDHYELLNVHIHSLSEHENGGSLRDAEIHMVHVREGTSDDLLVVGVLMDVGTYGVNSKL----TNLWMILDQGQEEVTDADEDFVSAPY-DLLPAGPEYSHYMGSLTTPPCTEGVKWIVMT 847
+G+T Y P WGE DC GE+QSPIN+ +Q K+ ++ +L + +C LV + H W VD ++C+ + T++G YEL+ H HS SE+ GG DAE+H+VH +LLV+GV+ DV YG N+ N W + G EV+ + PY ++LPA Y H+ GSLTTPPC+EGV WI+M+
Sbjct: 70 DGDTQYACSPENWGEVNRDCEGENQSPINVVMAQKS-KSLSQLQLNKNNEDCDLLYLVDNY--HTWKVDMSECDGSYTTTWNGVDYELVQFHFHSPSENTIGGGYFDAEMHLVHA--DADSNLLVIGVMFDVVDYGGNNFFKEFWNNTWSDVSTGDSEVSLSS---TLDPYTEILPADLSYYHWNGSLTTPPCSEGVTWILMS 264
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: A0A836C9F5_9STRA (Alpha carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F5_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.570e-29 Identity = 91/271 (33.58%), Postives = 136/271 (50.18%), Query Frame = 2
Query: 236 EWTYAETEEGETPY---GPAFW--GEAFPDCYGESQSPINLSQS---QHVVKNANEY----ELEFHPTECASTELVFSPGDHQWAVDFADCED--RPSLTFDG----DHYELLNVHIHSLSEHENGGSLRDAEIHMVHVREGTSDDLLVVGVLMDVGTYGVNSKLTNLWMILD------QGQEEVTDADEDFVSAPYDLLPAGPEYSHYMGSLTTPPCTEGVKWIVMTDITMLSLAQLVTFRRA--MGEHDMVSAEGHTNRPVQPLNGREV 970
+WTY G+ Y PA W E + C G QSPI++ S + NEY + C ++LV S H + + +C+D RP L + G Y+L VH+H+ SEH G AE+H+VH+ E S D+LV+ VL+DV ++ W +++ QG+ + D + +S PY LLP +Y Y GSLT PPCTE V ++++ + T ++ AQL FR++ + + G RP+QPLNGR V
Sbjct: 83 DWTYNPVCYGDGSYTVLAPADWHKNEDYAACAGPRQSPIDIVTSTLNDLGCSSDNEYLPAFSWQLQSGSCPFSQLVPSTK-HALELSYEECDDSTRPGLQYSGALGHSSYKLKQVHLHAGSEHSVDGQFGAAELHLVHINEADSTDILVLAVLLDVAETSEEPEVYKYWTLMNEAVANYQGESAI---DMNAISDPYALLPESKQYYTYQGSLTIPPCTETVTFVILAERTQVADAQLQAFRQSQTIAFGPTLDQSGSNARPLQPLNGRSV 349
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI) HSP 1 Score: 126 bits (316), Expect = 1.220e-28 Identity = 90/258 (34.88%), Postives = 124/258 (48.06%), Query Frame = 2
Query: 290 WGEAFPDCYGESQSPINLSQ-------SQHVVKNANEYELEFHPTECASTELVFSPGDHQWAVDFAD-CEDRPSLTFDGDHYELLNVHIHSLSEHENGGSLRDAEIHMVHVREGTSDDLLVVGVLMDVGTYGV-NSKLTNLW--MILDQGQEE-----VTDADEDFVSA-------------PYDLLPAGPEYSHYMGSLTTPPCTEGVKWIVMTDITMLSLAQLVTFRRAM--GEHDMVSAEGHTNRPVQPLNGREV 970
WG +PDC G QSPIN+++ + V A +++ C +L + W V F C+ P++T +G + LL H+HS+SEH GG DAEIH VH L VVGV++ + V N + W M G+++ V + VSA PY +LPA Y +Y+GSLTTPPC+E V WIVM + +S QL FR + E +V G+ RP QP NGR V
Sbjct: 2 WGALYPDCLGVRQSPINIARDIVTTDCTLAPVTGAFVFDM----GACMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNVGNLEFAKYWEHMAYVSGKQQYASEIVEKSTATMVSATASSSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMV 255
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: A0A835YV18_9STRA (Alpha carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV18_9STRA) HSP 1 Score: 131 bits (330), Expect = 6.450e-28 Identity = 91/270 (33.70%), Postives = 136/270 (50.37%), Query Frame = 2
Query: 236 EWTYAETEEGETPY---GPAFW--GEAFPDCYGESQSPINLSQS--QHVVKNANEY----ELEFHPTECASTELVFSPGDHQWAVDFADCED--RPSLTFDG----DHYELLNVHIHSLSEHENGGSLRDAEIHMVHVREGTSDDLLVVGVLMDVGTYGVNSKLTNLWMILD------QGQEEVTDADEDFVSAPYDLLPAGPEYSHYMGSLTTPPCTEGVKWIVMTDITMLSLAQLVTFRRA--MGEHDMVSAEGHTNRPVQPLNGREV 970
+WTY G+ Y PA W E + C G QSPI++ S + + NEY + C ++LV S H + + C+D RP L + G Y+L VH+H+ SEH G AE+H+VH+ E S D+LV+ VL+DV ++ W +++ QG+ + D + +S PY LLP +Y Y GSLT PPCTE V ++++ + T ++ AQL FR++ + + G RP+QPLNGR V
Sbjct: 387 DWTYNPVCYGDGSYTVLAPADWHKNEEYAACAGPRQSPIDIVTSTLEDRCSSDNEYLPAFSWQLQSGSCPFSQLVPSTK-HALELSYEGCDDSTRPGLQYSGALGHSSYKLKQVHLHAGSEHSVDGEFGAAELHLVHINEADSTDILVLAVLLDVAETSEEPEVYKYWTLMNEAVANYQGESAI---DMNAISDPYALLPESKQYYTYQGSLTIPPCTETVTFVILAERTQVADAQLQAFRQSQTIAFGPTLDQSGSNARPLQPLNGRSV 652
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: A0A835Z7J7_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7J7_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.850e-27 Identity = 88/269 (32.71%), Postives = 118/269 (43.87%), Query Frame = 2
Query: 317 GESQSPINLSQSQ-----------HVVKNANEYELEFHPTECASTELVFSPGDHQWAVDFADCEDRPSLTFD-------GDHYELLNVHIHSLSEHENGGSLRDAEIHMVHVREGTSDDLLVVGVLMDV-GTYGVNSKLTNLWMIL--------------------------DQGQEEVTDADEDFVSAPYDLLPAGPEYSHYMGSLTTPPCTEGVKWIVMTDITMLSLAQLVTFRRAMGEH--DMVSAEGHTNRPVQPLNGREVVYVT 982
G QSPIN++ + V +EF P C ELV P W V F C +P + G + H HS+SEH GG D E+HMVH S +V+GV++ G N+++ N W L Q QE V AD D V+ PY +LPAG EY Y+GSLTTPPCTE V W+VM + ++ ++ FR +M + +V G +RP QPLN R + T
Sbjct: 19 GARQSPINIAANDVLADCPAVAVADVAIQVAPMAIEFFPAACTFGELVIEPSVKNWEVQFTGCAAKPHIEVSARTASEGGAGADCRRFHFHSVSEHVIGGGYYDGELHMVHANADKSK-YIVIGVMLAANGNLRDNTEVQNYWARLAVKAQELVAPPAAGATEKPVDQKELGSQDQEPVA-ADAD-VADPYAMLPAGTEYYTYLGSLTTPPCTEAVTWVVMAEPVTVTQNEMRVFRESMAKAHGSLVDQSGSNSRPPQPLNTRHISLCT 284
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Match: H6WB76_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB76_VAULI) HSP 1 Score: 123 bits (308), Expect = 8.550e-27 Identity = 89/266 (33.46%), Postives = 124/266 (46.62%), Query Frame = 2
Query: 281 PAFWGEAFPDCYGESQSPINLSQ-------SQHVVKNANEYELEFHPTECASTELVFSPGDHQWAVDFAD-CEDRPSLTFDGDHYELLNVHIHSLSEHENGGSLRDAEIHMVHVREGTSDDLLVVGVLMDVGTYGV-NSKLTNL--WMILDQGQE----EVTDADEDFVSA-------------------PYDLLPAGPEYSHYMGSLTTPPCTEGVKWIVMTDITMLSLAQLVTFRRAM--GEHDMVSAEGHTNRPVQPLNGREV 970
P WG +PDC G QSPIN+++ + V A +++ C +L + W V F C+ P++T +G + LL H+HS+SEH GG DAEIH VH L VVGV++ + + N + T M G++ E+ + D A PY +LPA Y +Y+GSLTTPPC+E V WIVM + +S QL FR + E +V G+ RP QP NGR V
Sbjct: 75 PDMWGYLYPDCLGVRQSPINIARDIVTTDCTLAPVTGAFVFDMGM----CMLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVMISSTSDNIGNLEFTKYAEHMAYVSGKQKYASEIMETDATMAPAATPSSMASSTSMSAMEQVNPYSMLPADGTYYNYLGSLTTPPCSETVTWIVMKEGITVSPDQLEAFRAGLMDPEFPLVDNYGNNARPPQPTNGRMV 336 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.78.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig89.78.3 >prot_A-nodosum_M_contig89.78.3 ID=prot_A-nodosum_M_contig89.78.3|Name=mRNA_A-nodosum_M_contig89.78.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=291bp MPSAGITLAIIILIGAGGVIIGYLATEEHRRLDDSEGTPEWTYAETEEGEback to top mRNA from alignment at A-nodosum_M_contig89:795743..804605- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig89.78.3 ID=mRNA_A-nodosum_M_contig89.78.3|Name=mRNA_A-nodosum_M_contig89.78.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8863bp|location=Sequence derived from alignment at A-nodosum_M_contig89:795743..804605- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig89:795743..804605- >mRNA_A-nodosum_M_contig89.78.3 ID=mRNA_A-nodosum_M_contig89.78.3|Name=mRNA_A-nodosum_M_contig89.78.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=873bp|location=Sequence derived from alignment at A-nodosum_M_contig89:795743..804605- (Ascophyllum nodosum dioecious)back to top |