mRNA_A-nodosum_M_contig888.32.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig888.32.1
Unique NamemRNA_A-nodosum_M_contig888.32.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI)

HSP 1 Score: 661 bits (1706), Expect = 5.110e-220
Identity = 319/602 (52.99%), Postives = 415/602 (68.94%), Query Frame = 2
Query:  368 LEFSALNFYQVRDGPPGQAYPWLKNRKLIEPHRETILTVTNPQVDVNVNEGLDYRWTLRVNGTKEVQ--ASGRGIKVTVILARLQEHVVTLEEVNSAGVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLE--EGREMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIESSSSSEIKYDSDQPASRTPLLDPSWFGTFDRTDYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGVGNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQGDDYKNIS-TVLDLSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDALWS 2158
            L F A NFYQ+RDG P Q YPWLK+ KLIEPHRET  TV++P+      +G DYRW +      E +      G + TV+L  L E+ V LEEV++ G V+R   E V+VKYVRREIR LTD ER EL D+M  LW + ++   G+E+YGDDY DI+ IN+LH+   S Y CDHFH G+GFLTNHI++TN FE SLQ V+PKL+LPYWDFTIESS++        Q  +++ L   SWFGT D TD QVKDGRWAYTE+P++ K N    +  DVY KLR+PWN+N+RPY+TRG+G MC   ++E   WPTC  HY L T   DFYSW W S+   HGP+H W+GG LDC++ +  +A+LVG ++A+     SF HRKNL+ DGI+ C  GS ++   P E+LSSG+CGC+G+DL QGDDY++I   ++DL DL  DF   D D++R+VV  +CT  +  G+  Q+SSSLDP F+  HP MERLW ++VLTG++TDFTWPD D+T   PD T   +SLS+Y + C+GH GSDVFPFGIL SD +GF+V+T +    E GN LTNRE+L  FD    +V Y+YD FKW HC ADG++F+  W+
Sbjct:  166 LSFEATNFYQLRDGKPAQDYPWLKDVKLIEPHRETTFTVSSPR------DGFDYRWRVFAGSAAEGELCTEATGPESTVVLTTLDENEVVLEEVDADGTVVRRRQEKVMVKYVRREIRTLTDDEREELFDAMFTLWSVRVDGGNGKELYGDDYADIFAINRLHYKGASPYECDHFHDGLGFLTNHIVITNTFEASLQTVNPKLTLPYWDFTIESSTAGTKGDGGYQSQTKSELFQESWFGTADPTDGQVKDGRWAYTEIPKM-KVNDPGAVEPDVYSKLRAPWNVNDRPYLTRGMGKMCDAKVDEWYPWPTCETHYDLATGYSDFYSWVWYSLYDPHGPVHIWIGGVLDCEKTFGAIAELVGPSIAEDLALYSFIHRKNLFRDGIFSC-VGSATVVQAPAEVLSSGQCGCRGYDLTQGDDYESIYYNIVDLDDLIGDF---DADVKRQVVAALCTTTMNDGDHLQASSSLDPSFYATHPTMERLWMYAVLTGQITDFTWPDDDVTITKPDGTVEVESLSLYGETCQGHGGSDVFPFGILDSDTDGFEVKTGVKGM-ENGNTLTNRELLQAFDARSNSVSYVYDTFKWTHCEADGFDFNDAWN 755          
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE)

HSP 1 Score: 653 bits (1685), Expect = 2.620e-217
Identity = 339/724 (46.82%), Postives = 451/724 (62.29%), Query Frame = 2
Query:   65 YGAVKDPEQPASANPGLEHDGHEERRGAQDTAVGQRLGKHWIGRSLVGALIAGAFVA----------AFVTLTGSRTLEYEAQREASF-----------ARNVDVTYEGVEPLVGGSASLAPLEFSALNFYQVRDGPPGQAYPWLKNRKLIEPHRETILTVTNPQVDVNVNEGLDYRWTLR-VNGTKE-VQASGRGIKVTVILARLQEHVVTLEEVNS-AGVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLE--EGREMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIESSSSSEIKYDSDQPASR-TPLLDPSWFGTFDRTDYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGVGNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQGDDYKNISTVLDLSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDALW 2155
            YG+V+  +  A A P L  D H    G +     Q  G+ W+  ++VG L  G  VA          A  TL  +RT   E+  EAS            A +     +      G +  LAPL F A NFY +RDG P   YPWLK  KLIEPHRET  TV++P+      +G +YRWT+R  +  K+ ++A   G +  +IL  L + ++ LEEVN+  GVV R L+E V+VKYVRRE+R LTD ER EL D+M+ LW + ++   G+E+YGDDY DI+ IN+LH+ + S   CDHFH G+GF+TNH ++TN FE SLQ V+PKL++PYWDFTI+ SS+  I  +S   A   + +  P WFGT+D  D  +KD RWA+T +PR++ +N  E L  DVY KLR+PWN+N+R Y+TRG+GNMCG        WPTC  HY L T   DFYS+ W S+   HGP+H W+GG LDC+Q Y  + +LVG   A      SF HRKNLY +GI+ C +G+  +   PEE+LS+G+CGC G+DL QG DY++I   L ++D  S    +D++++REV  I+C      G+  Q+SSSLDP FWP HP MERLW +S+LTG +TDFTWPD D+T   PD T   +S+S+Y D C GHRGSDVFPFG+L SD + F ++T I    + GN+LTNREVL  FD    ++ Y+YD FKW HC ADG NFD  W
Sbjct:   14 YGSVEQ-DDVAKATPVLSFD-HLRENGTERRE--QPSGRRWLSFAVVGTLAVGVMVALAQAGYHLPSATTTLETART---ESMIEASGIARSSGSGSVKANDTPAAVKVHHSRPGVATELAPLSFEATNFYHIRDGKPALDYPWLKEVKLIEPHRETTFTVSSPR------DGFEYRWTVRGADADKDDLRAEASGAETVMILTVLDDTIIDLEEVNTETGVVARRLEEKVMVKYVRRELRTLTDEEREELFDAMYTLWTVRVKGGNGKELYGDDYADIYAINRLHYKAASPQDCDHFHDGLGFMTNHAVITNTFEYSLQRVNPKLTVPYWDFTIDGSSAGGIFGESVSSAETYSKVFTPEWFGTYDEDDNMLKDSRWAFTPIPRMEVNNPGE-LTPDVYLKLRAPWNVNDRAYLTRGMGNMCGIPTSNTYPWPTCETHYDLATSYKDFYSYVWDSLYDPHGPVHIWIGGVLDCEQTYTTIRNLVGEEAAGELAMFSFVHRKNLYREGIFQC-SGTAGVGQKPEEILSTGQCGCLGYDLTQGTDYQDIFDRLTMAD--SIIGDVDDEVKREVTSIICGTPANDGDHLQASSSLDPSFWPTHPTMERLWMYSILTGHITDFTWPDGDVTVTKPDGTVEVESISLYGDTCTGHRGSDVFPFGLLDSDTDDFTIKTGIRGNPDTGNQLTNREVLQAFDARSNSLPYVYDTFKWTHCEADGVNFDDAW 720          
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI)

HSP 1 Score: 648 bits (1671), Expect = 5.110e-215
Identity = 314/629 (49.92%), Postives = 416/629 (66.14%), Query Frame = 2
Query:  365 PLEFSALNFYQVRDGPPGQAYPWLKNRKLIEPHRETILTVTNPQVDVNVNEGLDYRWTLRVNG------------------TKEVQASGRGIKVTVILARLQEHVVTLEEVNS-AGVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLE--EGREMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIESSSSSEIK--YDSDQPASRTPLLDPSWFGTFDRTDYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGVGNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQGDDYKNI-STVLDLSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDALWST*LKVHK 2179
            PL F+ALNFY VRDG P Q YPWLK+ KLIEPHRET L V  P+      +G +YRW + +                    T+EV A+  G +  V+   L E+ V+LEEVNS  GVV R L E V+VKYVRREIR LTD ER EL D+M  LW + ++   G+E+YG+DY DI+ IN+LH+ + S  +CDHFH G+GFLT+H +++N FE SLQ V+PKL+LPYWDFTIES+    ++   D   P +R+PL  P WFGTFD  D  VKDGRWA+TE+PRV ++N   ++ +DVYGKLR+PWN+N+R Y+TRG+G +CG  +E+   WPTC+ HY L T   DFYSW W S+   HGP+H W+GG LDC++ Y+R+  LVG   A    E SF HRKNLY DGI+ C+ G   +    EE++ S +CGC G++L +G+DY+ I  T+  + D+  D+   D D +R+VV  +CT  +  G+  Q+SSSLDP FW  HP MERLW + VLTG++TD++WPD D+TY  PD T V +SLS Y + C GH GSDVFPFG+L +D +GF+++T I      GN LTNRE L  FDP +  + Y+YD F W+HC ADGY+F   W +  K  K
Sbjct:  132 PLSFTALNFYHVRDGKPAQDYPWLKDVKLIEPHRETTLDVETPR------DGFEYRWKVLLGAPVSITDSAPASSFEEEGVTEEVVATASGAEAVVVFTHLGENSVSLEEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDAMFALWEVRVDGGNGKELYGEDYADIYAINRLHYKAASQSSCDHFHDGLGFLTSHSMISNTFEFSLQKVNPKLTLPYWDFTIESTDVGGLEGTVDDGGPLTRSPLFRPDWFGTFDPEDNMVKDGRWAFTEIPRVFENNP-GLIDTDVYGKLRAPWNVNDRQYLTRGMGELCGADMEKAFPWPTCTSHYDLATGYSDFYSWVWQSLYDPHGPVHIWVGGVLDCEETYERIEGLVGKIAASQLAEQSFIHRKNLYRDGIFKCD-GRADVAQSSEEVMLS-RCGCLGYNLTEGNDYERIYHTMSVIDDVIGDY---DADTKRQVVEAICTTTLVDGDHLQASSSLDPSFWSTHPTMERLWMYVVLTGQITDWSWPDADVTYTTPDGTVVTESLSEYEESCFGHHGSDVFPFGLLDTDTDGFEIKTGISFNSATGNELTNREALQAFDPRINALPYVYDTFNWEHCAADGYDFGDAWQSSTKKSK 748          
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI)

HSP 1 Score: 614 bits (1583), Expect = 9.610e-203
Identity = 313/648 (48.30%), Postives = 407/648 (62.81%), Query Frame = 2
Query:  254 GSRTLEYEAQREASFARNVDVTYEGVEPLVGGSASLAPLEFSALNFYQVRDGPPGQAYPWLKNRKLIEPHRETILTVTNPQVDVNVNEGLDYRWTLRVNGTKE--VQASG--------RGIKVTVILARLQEHVVTLEEVNSA-GVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLE--EGREMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIESSSSSEIKYDSDQPASRTPLLDPSWFGTFDRTDYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGVGNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQGDDYKNISTVLD-LSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDALW 2155
            G+   +   +R A F         G         +LA   F+ALNFY VRDG PGQ YPWLK+ KL+EPHRET L V  P+      EG +YRW +R   T +    +SG         G    V+L  L+E+++TLEEVN A G V+R L+ETV+VKYVRREIR+LTD ER ELLD+M  +W + ++   G+E+YGD Y DI+ IN+LHH + +  TCDHFH G+GFL +H ++TN FE SLQ V+PKL++PYWDFTIE+S+S+E  YD   P +RTPLLD SWFGT D  D  VKDGRWA +E+P+V +DN    L  DVYGKLR+PWN N+R Y+TRG+G +C  + +++ +WPTC  HY L T    FY W W SM   H P+H WLGG +DC   Y+ + +LVG+++A                             +TL   LLSSG+CGC G+DL QG DYK +   ++ L DL  DF   D+  QR+VV  +CT VV  G  TQSSSS DP+FWP+HP MERL+QF VLTG + DF W D D      D T V +  SVYSD C GH GSDVFP+ +L +D +GF+V+T I  +   GN LTNRE+LA  DP   ++ Y+YD F+W HC ADG++F+  W
Sbjct:   77 GNERSQLHVERTARFVEEHAAAAGGASSSGESDQALA---FTALNFYHVRDGKPGQDYPWLKDFKLVEPHRETTLAVEAPR------EGFEYRWDVRPTCTGDSCTSSSGGESSPIQAAGAVAEVVLTSLEENMITLEEVNVADGKVVRRLEETVMVKYVRREIRSLTDDEREELLDAMFTIWDVRVDGGNGKELYGDGYADIYAINRLHHKAATHGTCDHFHDGLGFLVSHSVLTNTFEYSLQAVNPKLTVPYWDFTIETSTSTETVYDPASPYTRTPLLDASWFGTADLDDGMVKDGRWAKSEIPKV-RDNNPGGLEPDVYGKLRAPWNTNDRAYLTRGLGQLCQLNTDQLLAWPTCQTHYELTTGFHTFYDWVWDSMKAPHAPLHLWLGGTMDCAGTYEAIGELVGNSIA-----------------------------ETLTLLLLSSGQCGCHGYDLTQGSDYKIVMESMEYLEDLIGDF---DDTTQRKVVETLCTGVVNFGSHTQSSSSYDPLFWPIHPTMERLYQFPVLTGSIDDFFWTDADTNVTFADGTTVSEITSVYSDHCIGHHGSDVFPYYLLDTDTDGFEVKTGIRGQPILGNMLTNREILAALDPRANSLSYVYDKFEWSHCEADGFDFNDAW 682          
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE)

HSP 1 Score: 613 bits (1582), Expect = 6.290e-202
Identity = 335/713 (46.98%), Postives = 439/713 (61.57%), Query Frame = 2
Query:   65 YGAVKDPEQPASANPGLEHDGHEERRGAQDTAVGQRLGKHWIGRSLVGALIAGAFVAAFVTLTGSRTLEYEAQREASFARNVDVTYEGVEPLVG-GSASLAP--LEFSALNFYQVRDGPPGQAYPWLKNRKLIEPHRETILTVTNPQVDVNVNEGLDYRWTLRVNGT-KEVQASGRGIKVTVILA--RLQEHVVTLEEVNSA-GVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLEEG--REMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIESSSS----SEIKYDSDQPASRTPLLDPSWFGTFDRTDYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGVGNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYD-RMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQGDDYKNI-STVLDLSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKD-EAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDALW 2155
            YG+V DP + A+A P  E   H       D       GK   G + VG  +A A   A  +  G  T         S      V  +G E     G A+ AP  L F A NFY VRDG P   YPWL++ KL+EPHRET L+V +P+      EG +YRW +R   +  +V  +  G +  V+L    L+E++VTLEEV  A G V R LDE V+VKYVRREIR LT  ER ELLD+M  LW + +++G  RE YG++Y DIW IN+LH  + S   CDHFH G+GFLTNH LV+N FE SLQ V+PKL+LPYWDFTIESS++    +E   D      +TPLL  SWFGT D T   V++GRWA   +P++++ N  + +  DVY KLRSPWN+N+R Y++RG+G MC    E    WPTC  HY+L T   DFYSW W S+   HGP+H W+GG +DC++ Y   +  LVG   A     M+F HRK+++ DGI+ CE GSV++   P+E+L SG CGC G+DL QGDDY  I  +++ + +L  D    DE+ +RE+VR++C+  +  G+  QSSSSLDP FW  HP MERLW +SVLTG+VTDF WPD D+TY   D T   + +S YS+ C GHRGSDVFPF IL++++  F VQT I       GN +TNREVLA FDP +  + Y+YD F+W HC  DG++    W
Sbjct:   10 YGSVGDPAK-AAATPPAEGGEHPFFHEGDD-------GKPRRGLAKVGLALALALGVAATSRAGVHTAAATRSSXXSSTLQSSVDNKGRETSHRPGLATTAPPPLAFHARNFYHVRDGKPASDYPWLRDVKLVEPHRETTLSVDDPR------EGFEYRWLIRGGSSASKVHTAASGAEAVVVLEAKHLEENLVTLEEVEIATGAVARRLDEFVMVKYVRREIRTLTYEEREELLDAMLELWNVRVQDGDGREKYGENYSDIWAINRLHFKAASPQFCDHFHDGLGFLTNHGLVSNTFENSLQQVNPKLTLPYWDFTIESSTAGIAANEHLDDMFGSKIKTPLLQESWFGTADPTTRMVQNGRWANVPIPKMREGNPSK-IEPDVYSKLRSPWNVNDRRYISRGMGQMCHARAETFYPWPTCESHYNLATSFTDFYSWVWESLYDPHGPVHIWIGGVMDCEETYGVDIEHLVGEETALDLALMAFVHRKDMFRDGIFSCE-GSVAVTESPDEVLESGVCGCHGYDLTQGDDYLQIFESMVFMKELMGDS---DENTKRELVRVMCSTPINEGDHLQSSSSLDPSFWSTHPTMERLWMYSVLTGQVTDFEWPDADVTYTASDGTTYSQPISKYSEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHCAEDGFDLRDAW 703          
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI)

HSP 1 Score: 598 bits (1542), Expect = 4.460e-197
Identity = 291/605 (48.10%), Postives = 393/605 (64.96%), Query Frame = 2
Query:  359 LAPLEFSALNFYQVRDGPPGQAYPWLKNRKLIEPHRETILTVTNPQVDVNVNEGLDYRWTLRVNGTKE--VQASGRGIKVTVILARLQEHVVTLEEVNSAGVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLEEGR--EMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIESSSSSEIKYDSDQPASRTPLLDPSWFGTFDRTDYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGVGNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQGDDYKNIST--VLDLSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDALW 2155
            +APL F ALNFY +RDG P Q Y WL++ KLIEPHRET L V++P+      +G DY W +    T E  + A+  G +  V L  L + ++T++EV   G ++R LDE V+VKYVRREIR LTD ER ELLD+MH++W + +  G   E++GD Y DI +IN+LH  +    +CDHFH G+GFLT+H ++TN FE SLQ V+PKL++PYWDFTIE    +EI  D ++    +PL   SWFGT D  D  VKDGRWA TE+P +   +  E++  DVYG LRS W +N+ PY+TRG+G +C G + +   WP+C  H++LV D DDFYSW   SM   HGP+H W+GG L+C+     ++ LVG   A S    +FD RKNL+ DG + CE GS ++ T  +ELLSSGKCGC G+DL QGDD+K I T   +D  D+  D+   D++ +R+VV  VC + +  G+   + SSLDP FW +HP MERL+ FS LTG++TDF WPD + +Y   D   V ++  +Y D C GH GSDVFPF +L  D + F ++T +    E GN+LTNREVLA  D     + Y+YDNF+WDHC  DG +F+  W
Sbjct:   90 VAPLSFEALNFYHIRDGKPAQDYTWLRDVKLIEPHRETTLLVSSPR------DGYDYIWEVHAGETDEGDLIATASGAEAVVTLTVLDDSMITVKEVLPDGEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQIWTVRVSGGNGIELFGDGYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSMLTNTFEYSLQRVNPKLTVPYWDFTIEYHE-AEIAGDDNEMTINSPLFQESWFGTADPVDNVVKDGRWANTEIPAMDPSSPGELI-PDVYGLLRSRWTINSSPYLTRGLGKLCDGSVVDTYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHGPVHTWIGGVLNCEDTISSVSSLVGEKNANSLSLKTFDQRKNLWRDGFFECE-GSAAVGTPADELLSSGKCGCLGYDLSQGDDWKTIYTNSTVDFDDVIGDY---DDETKRQVVAAVCASTIFDGDHLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWPDSEFSYTDSDGNIVVETTGIYGDTCHGHGGSDVFPFDLLDGDDDAFQIKTGMPGNGETGNKLTNREVLAVLDARFNMLPYVYDNFRWDHCLKDGIDFEDAW 682          
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE)

HSP 1 Score: 598 bits (1542), Expect = 3.850e-196
Identity = 299/644 (46.43%), Postives = 408/644 (63.35%), Query Frame = 2
Query:  242 VTLTGSRTLEYEAQREASFARNVDVTYEGVEPLVGGSASLAPLEFSALNFYQVRDGPPGQAYPWLKNRKLIEPHRETILTVTNPQVDVNVNEGLDYRWTLRVNGTK--EVQASGRGIKVTVILARLQEHVVTLEEVNSAGVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLE--EGREMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIESSSSSEIKYDSDQPASRTPLLDPSWFGTFDRTDYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGVGNMCGGH-IEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQG-DDYKNI--STVLDLSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDA 2149
            +T T    + +  +   +F + +  T +  E   G +  +APL F ALNFY +RDG P Q YPWL++ KLIEPHRET LTV++P+      +G DY W +R   T   EV+AS RG +  + L  L ++V+TL+EVNS G ++R LDE V+VKYVRREIR LTD ER EL D+M  LW + ++   G+E+YGDDY DI+ IN+LH  +    TCDHFH G+GFLT+H L++N FE SLQ V+PKL+LPYWDFTIE    +E  +D D     +P+   SWFG+ D  D  VKDGRWAYT++P +   N  + L  DVYG LRS WN+N+ PY+TRG+G +C  + + +I  WPTC +HY + T+  DFYSW WTSM   HGP+H W+GG L+C++    ++ LVG   A S    +FD RKN + DG + CE G+       +++ S+G CGC GFDL    DD++ I  ++ +D  ++ SD+   D++ +R VV  VC + +  G+  Q+ SSLDP FWP+HP MERL+ F+ LTG   D  WPD D +          + +S Y D C GH GSDVFPF +L SD +GF+++T +    E GN  TNREVLA  DP +  + Y+YD FKWDHC   GY+FD 
Sbjct:   88 ITTTADEAIPFSPR---AFPKKIFETPKVQEETSGPAEEVAPLAFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTLTVSSPR------DGYDYIWEVRSGDTDDTEVRASARGAEALITLTILDDNVITLKEVNSDGEIMRQLDELVMVKYVRREIRTLTDDEREELFDAMFTLWDVRVDTGNGKELYGDDYADIYAINRLHFKAAMSETCDHFHDGLGFLTSHSLISNTFEYSLQRVNPKLTLPYWDFTIEDFE-AEKSFDDDDLKIVSPIFQESWFGSADPDDNIVKDGRWAYTKMPAMYPGNPGD-LNPDVYGLLRSRWNVNSSPYLTRGMGTLCNTYDVTQIYPWPTCELHYWMATEYSDFYSWVWTSMYAPHGPVHTWIGGVLNCEETMASVSGLVGEENANSLALYAFDQRKNFWRDGFFDCE-GTAEAGATEDDVFSAGMCGCLGFDLSSNSDDWQTIYYNSTIDFDNVISDY---DDETKRMVVAEVCASTIHDGDHLQAGSSLDPTFWPMHPTMERLFMFARLTGNTYDLDWPDADAS-------SSNEMISRYGDDCVGHGGSDVFPFNLLDSDHDGFEIKTGMKGNPEIGNSFTNREVLAAMDPRVNQLSYVYDTFKWDHCLGSGYDFDT 709          
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI)

HSP 1 Score: 589 bits (1518), Expect = 1.130e-193
Identity = 290/593 (48.90%), Postives = 387/593 (65.26%), Query Frame = 2
Query:  395 QVRDGPPGQAYPWLKNRKLIEPHRETILTVTNPQVDVNVNEGLDYRWTLRVNGTKEVQ--ASGRGIKVTVILARLQEHVVTLEEVNSAGVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLE--EGREMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIESSSSSEIKYDSDQPASRTPLLDPSWFGTFDRTDYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGVGNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQGDDYKNIST--VLDLSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDALW 2155
            Q+   P  + YPWL++ KLIEPHRETIL V++P+      +G DY W +R   T E    A+  G +  V L  L E+++T++EV+  G ++R LDE V+VKYVRREIR LTD ER ELLD+MH+LW + +   EG E+YGDDY DI +IN+LH  +    +CDHFH G+GFLT+H ++TN FE SLQ V+PKL++PYWDFTIE    +EI  D D     +PL   SWFGT D  D  VKDGRWA TE+P +   +  E++  DVYG LRS W +N+ PY+TRG+G +C G + +  +WP+C  H++LV D DDFYSW   SM   HGP+H W+GG L+C+     ++ LVG   A S    +FD RKNL+ DG + CE GS ++    +ELL SGKCGC G+DL QGDD+K I T   LD  D+  D+   D++ +R+VV  VC + +  G+   + SSLDP FWP+HP MERL+ FS LTG++TDF WPD + +Y   D   V ++ S Y D C GH GSDVFPFG+L  D + F ++T +   +E GN+LTNREVLA  D     + Y+YDNF+WDHC  DG +F   W
Sbjct:  100 QIAPRPFPKDYPWLRDVKLIEPHRETILAVSSPR------DGYDYIWEVRAGETDEADLIATASGAEAVVTLTVLDENMITVKEVHPDGEIVRQLDEMVMVKYVRREIRTLTDEERVELLDAMHQLWAVRVHGGEGIELYGDDYADISSINRLHFKAAQNKSCDHFHDGLGFLTSHSVLTNTFEYSLQRVNPKLTVPYWDFTIEYHE-AEIAGDDDDITINSPLFQESWFGTADPVDNVVKDGRWARTEIPAMDLGSPGELI-PDVYGLLRSRWTVNSSPYLTRGLGKLCDGSVLDTYAWPSCEEHHNLVMDYDDFYSWVSESMYSPHGPVHTWIGGVLNCEDTISSISSLVGEKNANSLSLNTFDQRKNLWRDGFFACE-GSAAVGAPADELLLSGKCGCLGYDLNQGDDWKTIYTNSTLDFDDVIGDY---DDETKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFHWPDSEFSYSDSDGNTVVETTSTYGDTCHGHGGSDVFPFGLLDDDDDAFKIKTGMQGNEETGNKLTNREVLAVLDARYNMLPYVYDNFRWDHCLQDGIDFYDAW 680          
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: D8LB18_ECTSI (ShTK domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB18_ECTSI)

HSP 1 Score: 526 bits (1355), Expect = 8.620e-172
Identity = 254/514 (49.42%), Postives = 340/514 (66.15%), Query Frame = 2
Query:  626 VTLEEVNSAGVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLEEGR--EMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIESSSSSEIKYDSDQPASRTPLLDPSWFGTFDRTDYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGVGNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQGDDYKNIST--VLDLSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDALW 2155
            +T++EV+  G ++R LDE V+VKYVRREIR LTD ER ELLD+MH+LW + +  G+  E+YGDDY DI +I++LH  +    +CDHFH G+GFLT+H ++TN FE SLQ V+PKL++PYWDFTIE    +EI  D D     +PL   SWFGT D  D  VKDGRWA TE+P +   +  E++  DVYG LRS W +N+ PY+TRG+G +C G + ++  WP+C  H++LV D DDFYSW   SM   H P+H W+GG L+C+     ++ LVG   A S    +FD RK+L+ D  + CE GS ++    +ELLSSGKCGC G+DL QGDD+K I T   LD  D+  D+   D+  +R+VV  VC + +  G+   + SSLDP FWP+HP MERL+ FS LTG++TDF WPD + +Y   D   V ++ S Y D C GH GSDVFPFG+L  D  GF ++T +   +E GN+LTNREVLA  D     + Y+YD+F+WDHC  DG +F   W
Sbjct:    2 ITVKEVHPDGEIVRQLDEIVMVKYVRREIRTLTDEERVELLDAMHQLWAVRVHGGKGIELYGDDYADISSISRLHFKAAQNKSCDHFHDGLGFLTSHSMLTNTFEYSLQRVNPKLTVPYWDFTIEYHE-AEIAGDDDDITINSPLFQESWFGTADPVDNVVKDGRWARTEIPAMDPGSPGELI-PDVYGLLRSRWIVNSSPYLTRGLGKLCDGSVVDMYGWPSCEEHHNLVMDYDDFYSWVSKSMYSPHAPVHTWIGGVLNCEDTISYISSLVGEKNANSLSLNTFDQRKSLWRDDFFACE-GSAAVGAPADELLSSGKCGCLGYDLSQGDDWKTIYTNSTLDFDDVIGDY---DDKTKRQVVAAVCASTIYDGDHLHAGSSLDPTFWPMHPTMERLFMFSSLTGQLTDFYWPDSEFSYSDSDGNTVVETTSKYGDTCHGHSGSDVFPFGLLEDDDAGFKIKTGMLGNEETGNKLTNREVLAVLDARYNMLPYVYDDFRWDHCLQDGIDFYDAW 509          
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE)

HSP 1 Score: 527 bits (1357), Expect = 4.170e-168
Identity = 291/707 (41.16%), Postives = 390/707 (55.16%), Query Frame = 2
Query:  347 GSASLAPLEFSALNFYQVRDGPPGQAYPWLKNRKLIEPHRETILTVTNPQVDVNVNEGLDYRWTLRVNGTKEVQ--ASGRGIKVTVILARLQEHVVTLEEVNSAGVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLEEGR--EMYGDDYLDIWTINKLHHLSGSGYTCDH-------------------------------FHSGVGFLTNHILVTNIFERSLQLVDPKLSLPYWDFTIE-----SSSSSEIKYDSDQPASRTPLLDPSWFGTFDRTD--------------------------------YQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRP--------------------YMTRGVGNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLGGFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSLDTLPEELLSSGKCGCQGFDLMQGDDYKNI--STVLDLSDLSSDFDRLDEDIQREVVRIVCTAVVALGEQT----------QSSSSLDPMFWPVHPNMERLWQFSVLTGRVTDFTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGFDVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYNFDALW 2155
            G   +APL F ALNFY +RDG P Q YPWLK  KLIEPHRET L+V++P+      +G DY W +R   T E    A+ RG +  V L  L ++V+T++EV+  G ++R LDE V+VKYVRREIR LTD ER ELLD+MH+LWV+ +  G   E  GD Y D+  I++LH  +    +CDH                               FH G+GFLT+H ++TN FE SLQ V+PKL++PYWDFTIE     +    EIK +S       PL   SWFGT D  D                                 QVKDGRWA T +PR       +++  DVYG LRS W +N+ P                    Y+TRG+G +CGG   E   WP+C  H++LV D DDFYSW   SM   HGP+H W+ G L+C+     ++ LVG   A S    +F  RK L+  G++ CE G  +     +ELLSSGKCGC G++L QGDD+K I  +   +L D   D+   D++ +R+VV  VC + +  G+            ++ SSLDP FWP+HP +ERL+ FS LTG++T+F WPD +++Y   +   V ++ S Y D+C GH GSDVFPFG+L +D +   ++T +    E GN LTNRE LA  D    N+ Y+YDNFKW+HC   G +FD  W
Sbjct:  114 GVGEVAPLSFQALNFYHIRDGKPAQDYPWLKGVKLIEPHRETTLSVSSPR------DGHDYIWEVRAGETDEANLVATARGAEAVVTLTTLDDNVITVKEVHPDGHIVRRLDEVVMVKYVRREIRTLTDEEREELLDAMHQLWVVRVSGGNGIEQDGDGYADMSFISRLHFKAAQNGSCDHVLAEEQGSLLCARGGTLLSAVTQLGDPQNDEFHEGLGFLTSHSMLTNTFEYSLQQVNPKLTVPYWDFTIEYVEAETDGDDEIKINS-------PLFQESWFGTADPVDNVAHFKAEWGNSQDARRLLTLTHTPSLAGSCILQVKDGRWANTAIPRTDPGTDGDLI-PDVYGLLRSRWVVNSSPPTVHSHLSKPTEPITVKNDRYLTRGLGKLCGGSTVERYGWPSCEDHHNLVMDYDDFYSWVSESMNSPHGPVHTWIAGVLNCEDTISSLSSLVGENNANSLLN-TFKQRKLLWSYGMFGCE-GFAAEGIPTDELLSSGKCGCLGYNLSQGDDWKTIYANPTSNLDDFIGDY---DDETKRQVVAAVCASTIYYGDHLHVSVRALFGHEAGSSLDPTFWPMHPTIERLFVFSALTGQLTNFHWPDSELSYTDTNGDTVVETTSNYGDKCYGHGGSDVFPFGLLDNDDDALKIKTGMQGNGETGNTLTNREALANMDGRFNNLPYVYDNFKWEHCLDSGIDFDDAW 801          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig888.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC46_ECTSI5.110e-22052.99Tyrosinase_Cu-bd domain-containing protein n=3 Tax... [more]
A0A6H5J7R8_9PHAE2.620e-21746.82TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LC42_ECTSI5.110e-21549.92TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
D8LC28_ECTSI9.610e-20348.30TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpu... [more]
A0A6H5J676_9PHAE6.290e-20246.98TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D7FW00_ECTSI4.460e-19748.10Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]
A0A6H5JRR4_9PHAE3.850e-19646.43TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
D7G9A4_ECTSI1.130e-19348.90Ortho-aminophenol oxidase n=1 Tax=Ectocarpus silic... [more]
D8LB18_ECTSI8.620e-17249.42ShTK domain containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K485_9PHAE4.170e-16841.16TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig888contigA-nodosum_M_contig888:261746..268619 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009040493.1
PFAMsSel1,zf-MYND
Model size3551
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.69e-64
EggNOG OGsCOG0790@1|root,KOG1550@2759|Eukaryota
DescriptionERAD pathway
Cds size2124
COG categoryT
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig888.32.1prot_A-nodosum_M_contig888.32.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig888 261786..267232 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870305.1990194-UTR-A-nodosum_M_contig888:261745..2617851680870305.1990194-UTR-A-nodosum_M_contig888:261745..261785Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig888 261746..261785 +
1680870305.3008265-UTR-A-nodosum_M_contig888:267232..2686191680870305.3008265-UTR-A-nodosum_M_contig888:267232..268619Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig888 267233..268619 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870305.214757-CDS-A-nodosum_M_contig888:261785..2624991680870305.214757-CDS-A-nodosum_M_contig888:261785..262499Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig888 261786..262499 +
1680870305.2260208-CDS-A-nodosum_M_contig888:262803..2629261680870305.2260208-CDS-A-nodosum_M_contig888:262803..262926Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig888 262804..262926 +
1680870305.2372537-CDS-A-nodosum_M_contig888:263217..2634391680870305.2372537-CDS-A-nodosum_M_contig888:263217..263439Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig888 263218..263439 +
1680870305.2536643-CDS-A-nodosum_M_contig888:264676..2647981680870305.2536643-CDS-A-nodosum_M_contig888:264676..264798Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig888 264677..264798 +
1680870305.2673862-CDS-A-nodosum_M_contig888:265548..2658851680870305.2673862-CDS-A-nodosum_M_contig888:265548..265885Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig888 265549..265885 +
1680870305.2776856-CDS-A-nodosum_M_contig888:266174..2663631680870305.2776856-CDS-A-nodosum_M_contig888:266174..266363Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig888 266175..266363 +
1680870305.2882123-CDS-A-nodosum_M_contig888:266815..2672321680870305.2882123-CDS-A-nodosum_M_contig888:266815..267232Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig888 266816..267232 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig888.32.1

>prot_A-nodosum_M_contig888.32.1 ID=prot_A-nodosum_M_contig888.32.1|Name=mRNA_A-nodosum_M_contig888.32.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=708bp
MVFSRHVGYGAVKDPEQPASANPGLEHDGHEERRGAQDTAVGQRLGKHWI
GRSLVGALIAGAFVAAFVTLTGSRTLEYEAQREASFARNVDVTYEGVEPL
VGGSASLAPLEFSALNFYQVRDGPPGQAYPWLKNRKLIEPHRETILTVTN
PQVDVNVNEGLDYRWTLRVNGTKEVQASGRGIKVTVILARLQEHVVTLEE
VNSAGVVLRHLDETVVVKYVRREIRALTDVERRELLDSMHRLWVLPLEEG
REMYGDDYLDIWTINKLHHLSGSGYTCDHFHSGVGFLTNHILVTNIFERS
LQLVDPKLSLPYWDFTIESSSSSEIKYDSDQPASRTPLLDPSWFGTFDRT
DYQVKDGRWAYTEVPRVQKDNMYEMLRSDVYGKLRSPWNLNNRPYMTRGV
GNMCGGHIEEIDSWPTCSVHYSLVTDNDDFYSWSWTSMGGAHGPIHFWLG
GFLDCKQPYDRMADLVGSTMAKSFREMSFDHRKNLYWDGIWYCEAGSVSL
DTLPEELLSSGKCGCQGFDLMQGDDYKNISTVLDLSDLSSDFDRLDEDIQ
REVVRIVCTAVVALGEQTQSSSSLDPMFWPVHPNMERLWQFSVLTGRVTD
FTWPDYDITYHGPDHTPVEKSLSVYSDRCEGHRGSDVFPFGILSSDMEGF
DVQTDIHAKDEAGNRLTNREVLATFDPGLGNVKYIYDNFKWDHCGADGYN
FDALWST*
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mRNA from alignment at A-nodosum_M_contig888:261746..268619+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig888.32.1 ID=mRNA_A-nodosum_M_contig888.32.1|Name=mRNA_A-nodosum_M_contig888.32.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6874bp|location=Sequence derived from alignment at A-nodosum_M_contig888:261746..268619+ (Ascophyllum nodosum dioecious)
TCGGGTGTTCGGGGGCGAGGGCGGGACGACGACAGCGATAATGGTCTTCT CTCGTCATGTTGGTTATGGAGCCGTGAAGGACCCCGAACAGCCCGCCAGT GCGAATCCTGGTCTCGAGCACGACGGCCATGAAGAACGCCGTGGAGCGCA AGACACGGCTGTTGGGCAAAGACTGGGGAAGCATTGGATAGGTCGTAGTC TTGTCGGCGCCTTGATTGCTGGCGCATTTGTGGCGGCATTTGTAACCTTG ACCGGATCCCGAACCCTCGAGTACGAGGCGCAACGAGAAGCTAGCTTTGC GAGAAACGTGGACGTGACATACGAAGGAGTGGAACCGCTTGTGGGCGGCT CGGCGTCGCTGGCCCCGCTCGAATTCAGCGCGCTCAATTTCTATCAAGTT CGGGACGGTCCACCCGGCCAGGCTTACCCCTGGCTTAAGAATAGGAAGCT GATCGAACCACATCGCGAGACCATCCTCACCGTCACGAACCCGCAAGTCG ATGTCAATGTCAATGAGGGGCTCGACTACCGGTGGACTTTGCGTGTGAAT GGAACGAAGGAGGTGCAAGCATCGGGCAGAGGGATCAAAGTTACTGTGAT CCTTGCACGACTCCAGGAACACGTGGTCACTCTCGAAGAAGTTAACTCTG CAGGGGTGGTTCTACGGCATTTGGACGAAACAGTGGTGGTCAAGTACGTT CGCAGAGAGATCAGGGCGCTCACCGACGTCGAACGAAGGGAGCTGTTGGA TTCGGTGAGATGACGCCCCCTTCCCACTGGGGTGATTTCTGACAAAGGGT TGCTGTGTACAGCGTTTGATTTCATTTTGCCTCAGACACGATATACATGT ACCGGCAGACTCTCAGCAGTGAACGCCATCGATACACAACGACTGCGTGA CCTTCTACAGTTAGCCTTGGCCCAATGGGGTTGGAATAAACACCGTCACA GAGAGCACGGGCAAATATAGGAGCCCGTGAAGGACTTATATTAAGTAGCA GTAGCTGGACCAAACACTCGATGCTTTCGATTGACCCGCGATGTTCGGCG CTCTACAGATGCACCGGCTGTGGGTGTTGCCCCTGGAGGAGGGCAGGGAG ATGTATGGAGATGACTACCTCGACATCTGGACGATTAATAAGTTGCACCA CCTGAGTGGGAGCGGTTACACATGCGATCACGTGAGATTTTTCGATGCTG TCAAGAACACCTTAATATTTACTACGTGGCGGCAAACTGTAGTTGAAGCA GTGGCAAGCAGTTTTGATAGTGCATGGTTGGGGGGGGGCTCTCTTCTCTA CGGCCGTGCGGTGCGGTCCTTGCAACCGGAAAGAGGCGTTTACTCCCTGC TGATTCCCTATCTCGATGGTGACCTCTGCCTAAAAACTCCCGGAAAACCC GCACATTTGTTTGTGACGGATGGACCCCGATACTCTCTCCGTGCATCTCG TGGCTGCCCCCGCCTTGTGCAGTTTCACAGCGGTGTCGGCTTCTTGACCA ATCACATCCTCGTCACCAACATCTTCGAGCGTAGCCTTCAGCTCGTGGAT CCGAAGCTCTCTCTCCCATACTGGGATTTCACGATCGAATCGTCTTCATC CAGCGAGATCAAGTACGACTCTGACCAGCCAGCTTCGAGGACGCCTCTGC TCGACCCGTCCTGGTTCGGAACATTCGACCGGACTGATTACCAGGTGAGC GAGCGCTGTTGTAACTAGCCGCCTTTCTTCCCCGGGCGTTTCTCGTTTCT TTCCTAGCCGTTCCTCATTTCCAGGCAGTGATTGTAGGCGATCATGGCTA CAAAGTGTCAACCACGTGCCCTCCATTCAATGACAGCACTGCAGCTTTTA TTTTTCTGCGGGGCATCATGCAGTACCGTGCAAATACCGGTCCGAGTTGA GCTCTAAAACCACCCAAACTCCGGATGAACGTACTATTAATGTTAATATG TGGAACCACTCTTTCCCTTTTTGTTGGAGGCTTTCTTACCACACCTGGCG AGCTCCTATTCTTCTTAGCACGCGTTTTCTTCTTTATCCTCTTTCTTAAT TCCCTGACGACAACCAAAGCTTGAGTATAGGGGCGGTGCTGTGTTGACGC CGCGGTAAGGTTTATTTTTTACCCGCACGACACTATTATACTGAACTATA TACCACCGTGGGTCTCTCGTATCTGGTGCACGTTGGGGGACCGCACCAGC ATGGTTGTCTCGTGCGTGGCCTTGGGGTAAATTACCTGCGAGGCCTTTGT ATATCTCGTACAAGCGAGGGGAGTTTTTATCCCATTGGTCGGCGCTCTAC TATACTATACCTCTGTTGCCAACATCGTACTAGTACGTCATACCGCGTCC CTCCACGATAGCTGTCAGCCACGCGCTTTGGCATCATCGAGTGGAGAGTT GCGTTCCTTATCTCTTTCCTTCCTTGGGTATGCATTTGCCTTGCCTTGCC TTGCCTTGCTTTGCCTTGCGTCCCTGTGCTCCTCGTCTCTTCGCCTCTTT GGCGCATGATGGAAAATTCAAGCTATCCGACCGCTGTATTGTTTCAACCC ACTATTTATGTCTTGATTCTGTGAGTAGTTTGTTCTATTTATAATTATTC ATACTACATTATGACTCGATGCAATATAGCTTTTCCTGTAACTAACGTAC TTCCAGTATACTGTCAATAGTAATGGGGATTGATCGAGCGAGGAAAAATA AGAGAAAATCAAACCATCCGGTACAAAGTCTTGAGCAGCCCTCTCGCGTG CAAAAAAAAACAGGGCGACGACAATGCTATTTTCCCCTCCTTCTTTCTTA CAGCCCTAGCAGATGGGTTTACGACGCGTCGTCAGCTTGCAGCGAGGATA AACGCCTTTAAGTACCGAACAGTACTGAACCTCAAGCCGTCTGATGTGCA CCCTGTTCCCGCGTGTAACAAACCTCGAAAGGTCAAGGACGGTAGATGGG CCTACACTGAAGTCCCGAGAGTTCAAAAAGACAACATGTACGAGATGCTC CGATCGGACGTATACGGCAAGCTCCGATCGCCTTGGAACCTAAACAACAG ACCGTGAGTGGAAAGCGATGGTTGTTTACTCCTGGTCGAGCTCGTAAATG GAAAGTGATGGGATGTTTACTCCTGTTTGAGCTCTGCACAATATATACTG TGGCGTGCCGGCACCTTGTGGGCATGGATTTGGTTAGATTTACTTGTACC AGGAACACGACCTGCGGAGAAAGAAAGCAGGCTGTAAATAATAAAAGCAG GCTCAACTAATTCTGGTCCAAAACGGCGCTTTCCCTGAAATAAAAATCTT ACCTAAAGCTTTTAAAAACGTTGATAACTGTTTTAGGTTTGTTTGAAGCT CGCACTCACTCAAACAATAAGTCAAAAGAGAGCGCTTTCGGGGATCTTTT ACAACCTATTTCGTGCATTCCCTGTGCCCTTACCGAAATCATGGAACTTC AAAAATCTTGAAATAGTTACCACGCCATCGACATGTGTTGGAGACACCCA GTAAAGGTTCTAGATCAATTTGGTTATGAGGAAAAATGCTGTTTTGGAGT TGAGCTTGCTTTTGATATGCAGCGTGCTTTCTCAGGAGACCGTGTTCAGG ACTCTGGGGCTCTAGGTTGCGTCAAATAGAAGCTGTGGACAAGGTCTTTC TCCCCGTTCGGAAGGGAACCCTCCGCTGATATGTTCGATATCTGTACGAA CAAATAGCGGCCAAAGACTGATGCTGCAGGAACATCAGTGCCGCATGCTC AACAGCAACTACTGCCCTCTGCCTCCGTGATTCGACCTGACGTTTGATAT CAGGTATATGACACGTGGGGTTGGCAACATGTGCGGTGGTCACATCGAGG AGATTGACTCGTGGCCCACGTGCAGCGTGCACTACAGCCTCGTGACTGAT AACGACGATTTTTACAGCTGGTCCTGGACAAGTATGGGCGGCGCCCACGG CCCTATTCACTTTTGGCTAGGAGGGTTCTTAGACTGCAAGCAACCTTACG ATAGGATGGCGGACCTGGTCGGATCCACCATGGCAAAGAGTTTCAGGGAA ATGTCGTTCGACCACCGGAAAAATCTTTACTGGGATGGAATATGGTACTG CGAGGCAGGAAGTGTTAGCTTGGACACGTTGCCCGAAGAGGTGAGCATAT CCCGTGTCCTAAGTGCACTGTCTGTGGTTTGATGCTTGTGGAAGGCAAGA GTTAGAGGTGGGGTTTCGGGTCATGATACCAAGGGCGCGCGGAAAGGCAT ATCCTTGGTCGATTTCGGGGGGTAGATGCTCCCCATCGTTCATTTTGCTC TTATGTCTCCCATGTCCACGGGATGCGCAGGCGCTCATGGTGTAATTCAG CAATGCCGTGTGTTAAAACATTTCTCGCACTTTGCTCTGCCGACTTTGTA CGCAACGGTCATGCTGGACGGTACCATAGCTCCTTTCTAGTGGAAAATGC GGCTGCCAAGGGTTTGATCTCATGCAAGGGGATGATTACAAGAACATCAG CACGGTGTTAGATCTAAGCGATCTTTCATCAGATTTTGATCGTCTTGACG AGGATATTCAGCGGGAAGTTGTGAGGATTGTGTGCACTGCCGTCGTTGCC CTTGGAGAGCAGACACAAGTGAGTGAAAGTCTTGTCGGCTTGTTCTGTGA TGTACGTGGTAGTAGTAGTTTTTTTTTGTCGTTTTCGTCACGTTTCAAAA ACTAACAATAGTATCGATAAAAGTACAGGTCTTCTTACATACCTGGTATG GGGTGTCGTTCAGGGTTGACATTTTAAGGAGCTTCGCTCGGGAGTGGGAA TTCTGATGTCCGGTAAAACTTGGGATACTTTCCAGCCGATTTGGGCAACT TTCGCTATGAACGGGTATCACAGCTGCAAGTTTGTGGTGTGAACTCGTAT CTGCTTCTACGACACCCATTTTCAGGAAATGTAATGAAGGCATGCACTCT ATGGTGGGTGGCTGTTCTCGTCTCAAGAATATCGTCGATGTCGCATCTCA TGCACCCTCCATGAGAACCAACCCGACAATGCAAACGGTCATGTCCCCTC CCTAACATTTTCCCTAACAGTCAAGCTCCAGCCTGGACCCCATGTTTTGG CCAGTACACCCCAACATGGAACGTCTCTGGCAATTCTCTGTCCTAACCGG GCGTGTTACCGACTTCACGTGGCCGGATTACGACATCACGTACCACGGAC CGGATCACACACCAGTGGAAAAATCGTTGAGCGTATACAGCGACAGGTGC GAGGGACACCGTGGCAGCGACGTGTTTCCTTTCGGCATACTATCAAGTGA TATGGAAGGTTTTGACGTCCAGACCGACATTCATGCCAAGGATGAGGCGG GTAATAGGCTAACGAACAGAGAGGTCCTCGCCACGTTCGACCCTGGATTG GGCAACGTCAAGTACATATACGACAATTTTAAGTGGGACCACTGCGGAGC TGACGGCTACAACTTCGACGCTCTCTGGAGCACGTAACTCAAGGTGCACA AAATGGCGCGTATGCAACTGTCTGTATAGCTCGTTTCTTCTGGATATGGC GGTTTGCGACAATGTGCATCCGCCTGAAGCGCACGACCACTGAGCATCTG ACGGCTACAACTTCATCGTTTGCTGGACGCTCAAAATAGTGCACGTAGTA CTTTCTGTATAGGTCGCTTCCTCTGGATATGCAGAGTTTCTACAATGGGC ATCCGTCTGAAGCGTGCATAGCTTTCCTTCGCTATCGTATGTATACGTGG AAAGGTCAAGTAGGACCACTGCGCAGCTGGCGGCTTCAACTCTGACGATC TATGGAGTCGTAAAAGAGCGTGTTTTTCTTATTGGAGATATTCGACATCG TCTATCAGTCTGAAGCATGCGCCAATGGCCTAACCGTCGGAACGCGTCTC TCTTAGTCATTTCGAACATTTGCAGTTTCACAGAACGTCCATCAGCTTCG TACTACCTCGCTTGGCTCTTTTAGCACAAGCACGCCGTTTGATGTTTTAT CGATTTGTTTTTGTTTTTAAGTCAAGGAAATTATATCCTCGGGAAATACT GCGACAACTTGTTTTCAATACCAAGTACATGTTGTAGATTACGAAGCATG TTGCAACATGCCCCACATATTTCACACATCAACATGTGGCTGAAAAGATG CATGTTGGGAATGTTTTGCGTATCAGTGGAACGTTCTTGAATATATTGGG AAAGGCAGTATGGTAGTTTTCATTTGCCGGGAATCGGTTAGGCTAACGAA ATCGTATTGAATCCAATGCTGATGACCATAACGCGAGGACAATACGGGGT TGATTTGTCACGTTGTCCTCGTCGCCCGAGTGGTCTAGTAGGTAACCTGC ACACCTGCTAGTGCGGAAGTCGTGAGTTCGATTCTTACCAAAGTAGGATT TGTGTTCTTTCTTTCGTAACGGAAAGCGTGGGAACGCGAGTAAGTAAAAT TCAACCATTGGTTGACGAGTTGTAAGACAGAGTGCTGAACTTGCATCGCG ATAAAAAAATTGGAAGGCGTGAACCGGGGAGAGATGGGAAGATCCTTTGT GACCGGAGGCAGGATGGTAATGATGAAGTCCATCGGCTAAAAGTGAGATT AAAGAAAAAAAGAAAAAAAAAGTTGTCTAACTCGTATGCGATGGGTAGCG AAAACATTCCATTTACATGAAGATGCATTGCGGGAATCCTATAATACGCG TATTGACTGTTGTAAATGTGTACCAGGTATTGAGTATGTATGACCAGCAC TTGGGAGGGTTTGCGGTATATTGGGAAATGTTATATGGTCCAATAGCGTC CACTTGCCTGGAAATCATGAGCAAGTCTAATAATAACGTATTGTATGAAC TACCGGTGATCATATTGCGAGGGC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig888:261746..268619+

>mRNA_A-nodosum_M_contig888.32.1 ID=mRNA_A-nodosum_M_contig888.32.1|Name=mRNA_A-nodosum_M_contig888.32.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2124bp|location=Sequence derived from alignment at A-nodosum_M_contig888:261746..268619+ (Ascophyllum nodosum dioecious)
ATGGTCTTCTCTCGTCATGTTGGTTATGGAGCCGTGAAGGACCCCGAACA
GCCCGCCAGTGCGAATCCTGGTCTCGAGCACGACGGCCATGAAGAACGCC
GTGGAGCGCAAGACACGGCTGTTGGGCAAAGACTGGGGAAGCATTGGATA
GGTCGTAGTCTTGTCGGCGCCTTGATTGCTGGCGCATTTGTGGCGGCATT
TGTAACCTTGACCGGATCCCGAACCCTCGAGTACGAGGCGCAACGAGAAG
CTAGCTTTGCGAGAAACGTGGACGTGACATACGAAGGAGTGGAACCGCTT
GTGGGCGGCTCGGCGTCGCTGGCCCCGCTCGAATTCAGCGCGCTCAATTT
CTATCAAGTTCGGGACGGTCCACCCGGCCAGGCTTACCCCTGGCTTAAGA
ATAGGAAGCTGATCGAACCACATCGCGAGACCATCCTCACCGTCACGAAC
CCGCAAGTCGATGTCAATGTCAATGAGGGGCTCGACTACCGGTGGACTTT
GCGTGTGAATGGAACGAAGGAGGTGCAAGCATCGGGCAGAGGGATCAAAG
TTACTGTGATCCTTGCACGACTCCAGGAACACGTGGTCACTCTCGAAGAA
GTTAACTCTGCAGGGGTGGTTCTACGGCATTTGGACGAAACAGTGGTGGT
CAAGTACGTTCGCAGAGAGATCAGGGCGCTCACCGACGTCGAACGAAGGG
AGCTGTTGGATTCGATGCACCGGCTGTGGGTGTTGCCCCTGGAGGAGGGC
AGGGAGATGTATGGAGATGACTACCTCGACATCTGGACGATTAATAAGTT
GCACCACCTGAGTGGGAGCGGTTACACATGCGATCACTTTCACAGCGGTG
TCGGCTTCTTGACCAATCACATCCTCGTCACCAACATCTTCGAGCGTAGC
CTTCAGCTCGTGGATCCGAAGCTCTCTCTCCCATACTGGGATTTCACGAT
CGAATCGTCTTCATCCAGCGAGATCAAGTACGACTCTGACCAGCCAGCTT
CGAGGACGCCTCTGCTCGACCCGTCCTGGTTCGGAACATTCGACCGGACT
GATTACCAGGTCAAGGACGGTAGATGGGCCTACACTGAAGTCCCGAGAGT
TCAAAAAGACAACATGTACGAGATGCTCCGATCGGACGTATACGGCAAGC
TCCGATCGCCTTGGAACCTAAACAACAGACCGTATATGACACGTGGGGTT
GGCAACATGTGCGGTGGTCACATCGAGGAGATTGACTCGTGGCCCACGTG
CAGCGTGCACTACAGCCTCGTGACTGATAACGACGATTTTTACAGCTGGT
CCTGGACAAGTATGGGCGGCGCCCACGGCCCTATTCACTTTTGGCTAGGA
GGGTTCTTAGACTGCAAGCAACCTTACGATAGGATGGCGGACCTGGTCGG
ATCCACCATGGCAAAGAGTTTCAGGGAAATGTCGTTCGACCACCGGAAAA
ATCTTTACTGGGATGGAATATGGTACTGCGAGGCAGGAAGTGTTAGCTTG
GACACGTTGCCCGAAGAGCTCCTTTCTAGTGGAAAATGCGGCTGCCAAGG
GTTTGATCTCATGCAAGGGGATGATTACAAGAACATCAGCACGGTGTTAG
ATCTAAGCGATCTTTCATCAGATTTTGATCGTCTTGACGAGGATATTCAG
CGGGAAGTTGTGAGGATTGTGTGCACTGCCGTCGTTGCCCTTGGAGAGCA
GACACAATCAAGCTCCAGCCTGGACCCCATGTTTTGGCCAGTACACCCCA
ACATGGAACGTCTCTGGCAATTCTCTGTCCTAACCGGGCGTGTTACCGAC
TTCACGTGGCCGGATTACGACATCACGTACCACGGACCGGATCACACACC
AGTGGAAAAATCGTTGAGCGTATACAGCGACAGGTGCGAGGGACACCGTG
GCAGCGACGTGTTTCCTTTCGGCATACTATCAAGTGATATGGAAGGTTTT
GACGTCCAGACCGACATTCATGCCAAGGATGAGGCGGGTAATAGGCTAAC
GAACAGAGAGGTCCTCGCCACGTTCGACCCTGGATTGGGCAACGTCAAGT
ACATATACGACAATTTTAAGTGGGACCACTGCGGAGCTGACGGCTACAAC
TTCGACGCTCTCTGGAGCACGTAA
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