|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 234 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 177 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870304.3075638-CDS-A-nodosum_M_contig888:61725..61831 | 1680870304.3075638-CDS-A-nodosum_M_contig888:61725..61831 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig888 61726..61831 - |
| 1680870304.3788633-CDS-A-nodosum_M_contig888:69862..69933 | 1680870304.3788633-CDS-A-nodosum_M_contig888:69862..69933 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig888 69863..69933 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870304.391271-UTR-A-nodosum_M_contig888:69933..69990 | 1680870304.391271-UTR-A-nodosum_M_contig888:69933..69990 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig888 69934..69990 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig888.10.1 >prot_A-nodosum_M_contig888.10.1 ID=prot_A-nodosum_M_contig888.10.1|Name=mRNA_A-nodosum_M_contig888.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=59bp
MRHMVEGGIEAKFTGVCVIGTLTRQAKARINQGRDGLFSQPPERDRVMRV
QLVDVVAT* back to topmRNA from alignment at A-nodosum_M_contig888:61726..69990- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig888.10.1 ID=mRNA_A-nodosum_M_contig888.10.1|Name=mRNA_A-nodosum_M_contig888.10.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8265bp|location=Sequence derived from alignment at A-nodosum_M_contig888:61726..69990- (Ascophyllum nodosum dioecious)
TGAGCATCTCCCAGTCAGGGAGGAAACGATGTAGCACATTTTTTACGACG
GTGTGCCATGCGCCACATGGTTGAGGGTGGCATCGAAGCGAAATTTACTG
GAGTGTGCGTGATTGGAACGCTTACCAGGTAAGTGCTGTTGAACCCGACA
TCGATTCGAAATTGGACACTTACGTTTTTCTTCCGGATGAACACGGGTTC
CTTCTGGCTGAATCGATGGAACACTTTGACACGCCAAACGCCGAGCAGAA
AAACTGGTTGCAGACGTAGATGTCACCAGCTTTCATCGATCCCTGGTTCT
TTCCTTGCTTAGCAAACGGTACCATCGTCCCTATCCATGCCGTGCGACCC
TTACGGCTCTCCAACCGCGAGAAGTCTTCTTGCTGTCGTCGAAGCTCCTC
CTCGATGTCGCCGTTGCCGGTCAAAAATGTTTCGACGCATCTCATTGTTT
GACAGCACACGAAGGACTCTTTCACCATCACACGGACGTCGGTTGTCGAT
GTCCGTTTACAGCGATTCGCCTCGGGGCCTTCCGTGCGCTGATCTTTTGC
CGGTCCGGCCGCGAGGCAAGGGTCAATGTTTTCCAGGTTATCGTCACTTA
ACCAGGCGATAGGGGTTCTAGAGGCCGTGTAAGATGATCTCACAAAAAAA
GACGACATGCTTCTGTTATATTGACGTTCATCACGAACGCGATAAATTAA
GCTAGAACAGCCGACTGGACAATGCGGGCAGCGCCTAAGTAATAATGGGT
TCGATCTTCTCAAACGTTTATACACATTGGAATATAGTTTTTAATCCACT
TCGAGGCGAAAGCTAGTTCGATCCCTAGATCGATGGTCTCTACATAAGCA
AGACTAGTTGAAAAAATCCCGAACATATACGTCATTTTAATGTACCCAAA
TAGTTATTTTCTTAACCTTTAAGCATTGTGTGGAAGGAAAACCGTTGAAA
TACAAAAAAAGAACAATTTGTTGATCGAAGAGGCCAAACAGTTCTTTTTT
TAACTATGTACGGCTTCAATCTTAGCCAATAGGTTTTATCAACTTTATGA
CAATTATAAAATGGCTCCATTTTTCGGTGTGGAAAGCTATGTTGCGCGCC
ATTTGCGGTACTGTTTGATTTGGCAATAATGTTGAATCAAGTATGTAACA
AGGTTTTAATCTGAACACTAAATACACGTGTTCCCTTGTGTTAGAGGGTA
CGGCTGCTCCTAACATAGCGAGGACATCAAGGTGCATTCATAGACAAACT
CTTCCGAGATGATAACGAACCCTTAGGCAAAATAACCAGAATTTGACGAA
TAGTCTACATATATATAAGAATAATACAATATGTACATACATAAGATTAT
AAGAATAATTTTTGACCGGCAAGGACGACATCGAGGAGGAGCTTCGACGA
CAGCAAGAAGACTTCTCGCGGTTGGAGAGCCGTAAGGGTCGCACGGCATG
GATAGGGACGATGGTACCGTTTGCTAAGCAAGGAAAGAACCAGGGATCGA
TGAAAGCTGGTGACATCTACGTCTGCAACCAGTTTTTCTGCTCGGCGTTT
GGCGTGTCAAAGTGTTCCATCGATTCAGCCAGAAGGAACCCGTGTTCATC
CGGAAGAAAAACGTAAGTGTCCAATTTCGAATCGATGTCGGGTTCAACAG
CACTTACCTGGTAAGCGTTCCAATCACGCACACTCCAGTAAATTTCGCTT
CGATGCCACCCTCAACCATGTGGCGCATGGCACACCGTCGTAAAAAATGT
GCTACATCGTTTCCTCCCTGACTGGGAGATGCTCAGAAGGTCTAGGCGCG
TTCTGATTTTTATTTAAACAAGATGAACCTAGCGCTATAATATACAGTAC
TGGTAATATACTAACATAAAAAGAGTCTTCGATACTAAAATTTCGAGAAT
TCCGACAGTCCCGTCCCTGCAGCGAGGTTTGCAACACAAATAAGTAGTAG
TGTTGAGAAGCTTATTTCATGTATGTTCGTGTTCCACCCAGTCATTTGGA
GCTTTCATAGGCTGCACGTGTTGCGGCCGTATCTCAAACGGAGGGCTGGT
TTAGCGCTCGGCCCGCTACATTGTGTGTGCCCACTCGTTCCTTCGTCTGC
TGTTTTGGGTGGTTCCTACCTAGACAAAAACAACAACAAAAAGGACGATC
AGTATTCAGAAACAAGACGCCACATACTGACATACCTTGACTCGTACGCG
GAGCAATGCGGGCAGCACATGCCTCACAAGGACGCCATCTACCTCTACGT
TCACAGCAAGAAGGTAATAATATGATAGTGGTGGGACGATTTAGAAGAGT
GCGATTGTGGTAATTTGCGGTAGAGTGTATAACGGTGGGTTTATCCCCGA
TATTTTACTGTTGACCCAAGCGCCTATTTTGGTACGATGGTTCGATGGCG
ATATTATACTATTACTACCCTCTTAACTATATAGTATACTACAGTGTCTT
CTGTTTTGAAAGAAAAATAGAACACACCTAGAAGACTAGACCTTCTGAGC
ATCCCCCGGTTAGGGGGGGGAAAATGTCAAAACGTTTAGGTGGGATCAAA
GGCTGCAAATACAAAACCTCTTCATGGCATTTAAACGGGTTCCCCTATGG
TGGTACCATTGGGTCAACAGTATAATATCGGGGATGGCGATTAATAATGT
AAGTGTACATTATAACGGTGGGCTTCTCCCCGACATTATACACTGCTGAC
CCGATGTTACTACCATCGGGACACCCGTTTAAATGCTATGAAGAGGGTTT
GTATTTGCAGCCTACTATGATCCAACCTAGATTTTTTTAGATTTTTCTCC
TGACTGGGGATACTCAGAAGGTCTAGGCGCATTCAGCTTTTACTTTAAAC
GTGGAGTTTTTTGTTAAGTTTGCGTACAGTATCTTTCAAAGAAAATAAAC
CTGCAATGCACAGGTTCCTCACCCCCCTATACCCCCCCCCCCCCTCCCTC
CACCACCCCCCCTCCCCCTCGCCCTGGCCCAAAATGCGCGCGGGCTGGAT
CATACTTCCCCGGTGCCAATCAGGAACTTTTTGAGACGTGTCAGCGAAAC
TTGCGCACGCTGTACGGTTCTAGCGTTGGGTGCAGTAAGACCTATTTCTA
CAAGGTGTGGAAAAAGTACCGCCCCAACATCAAGCCTAAGACAGGGGTGA
CTTCATGAAATGTTCGCTGTGTACGCTATTTAGTGCAACGCTGTTGGGAG
CTCCCGGAACTAGAAGGGTTAGTGCGGATGATGCTCTCGTGAAGCGCACA
ACCGACGACAGAGCGTGACATTTAGGGGTGAGACCATAACAGACACGTAC
CTACTGTGTAAAGATATTATTGCTTATAATACGTTTTAATGGTGGCAAGT
ACGTCCGTGTTCCTCGCTTTAAGGACCATACAAGTAGTTGTAGAGTTTGC
TTCGTGCAGTAGTAGTGCTGTTTCTCAACCACCGACGTCCTAATTGTCAT
ACTCCCACTAACACTTCCCTGTTAAATTTTCTCAAATATTTTGATGCATT
CGTTTCGGGATTTAAGTTGGTGAGCAAGGATCCTGATCGTATTGCAATGA
TCGAAGCAATTGCGCTGCGCTCGCTACAAGACATGAAACCGCTGGGGAAG
GTATCACTCCAAGCGGATGCTGCCTGCCAAACGGCATTCTGCCTACCCGC
TGTCTCGCCGCAATCACACGATACTGACAAGTGAGGTTTGTAGCGATGAT
TGGACACGTATAGTGAGGCGATTGCGACCGTTTTCATCGTACCCGGAGGA
CAGCTATAATTTGTTATTGTTTAATTTCCATCGTGGAGTAGAATGATAAG
TTGGTCTAACGAGAAATAAGGGGATATGCGGATTCCCTGAAACGTTTCAC
CATCACAGACCCACATTCTTAACATTGCACTTCGATCGACCAATAATATC
GTCACCCCGCGTACACAACGTCCGGGAAGTTATGATACAAAATCACAATG
TAGGAAAGTTGTACTCGTCGCGATATCTCCAAAAAACATACTGTAATACT
GTGTAATCCGCAGTTACGTGTAAAATTTATCTCAGGGGTTACTCAGAACG
TCAGAAGATTTACTGCGTCTATTCCCCAAGCAACTTCTTCCAGTTCTTCC
TTGCACCGCAAACTGTCGGAGGAGGTCAGTTTGTTGCTTGCCTATTGAAA
CTATGATAAGCGCGTGTTATTCTTGGAAAGGGGCTTTGAGATGGGATGTA
TGTTGCAGATATTGTTCGACGAAAACACTCCGCAGGGAAATCTTAACCGG
ACGAAAACGTCATATCGGATAAGTTATCTTCCATTCGTTAAGACGCATGT
GAGCACACCAAAGATTCATGTGAACACACACAAAGGAGGGGCGGTGTTGT
CTTTGTACCGGTTCTAGATACAGAAGCTCCGCCGGAGAGACACGGAAATT
CACAGTACCCGAAGCATATATAATTCGTAAACTCAAACAAAGATGTGGGA
TAGAGGAGGTAGAGTTGTAGCGGTTCAGTTACTTACTGTAGAACCTCTTG
AGTGTTTTAATAAAATAAAAGCTTTTCTTGTTTCAAAGACTGCGCTTTTG
TAAATTACTTTTTGTCTTCTCCGTTCGCGCCCAGGGAGCAACCTCATCTG
CACAGCAATCCACCACGCCCTCACCCCTATCTTCGAGACCCACATTAACG
ACGGCGGCGACGCCTACATCGAGGAGTTGTTCTTGCAGGTAGACAATTGC
GTCGGAGAGAACAAGAATCACATCCTTGTCGGGTACTTGGGCTCGCTTGT
CGGCCGGGGCATCATTGGTCGTGTGGAAATCAATTTCATGATGGTGAGGC
ACACGCACATCAAGATCGACCAGATCTTCTCATGGTCAGGTATGCGCCTC
TCTTTCCCACCCCACCACTACTGGTATCAAGATCAAGTGGGCATGTTGAA
AGTACGGGCGATGTATAACGTTGCGATTGTGACTTTATAGTGACCCCCTA
TCCCCCGGTTCAGTACAGTACGATAGTAGAGAATGAAAGCGCGTATTCAT
ATATATTATTCAGAATGTACCGTAGCTATTGTAGTAGCGTTTAAAAGTCT
GTATATATCCAAACCTTAGGACCATACGGTACTGAATTTGCTTTACTCAA
AGCCGTCTAGAGATTAATTTGCCGTTTATTTCTTACGCTATCGGTTGGTG
GACGTGCTCCTCTCTCCCGGCGCGAACCTTTGAGAAGTGCATCGACTGTC
ACTCTCCAGAGACCCTTTGAGCTGGGGAGTATAAAAAATAACACGAACGT
TACCAAAAAGAACGATTAACGAGAAAGGTTTAGGGGCGAATGGTGTTTCG
GTCATGTCTATGTATGGTTACACATATTATTTCAGGAGTGTGGATCAACC
GGGTAAGGTTGCCAATCCTGCTCGTGGTCAGGTGAATAGGGAAAAATAAT
ATTTCCCTCTTCGCGATCGCGCCTGAGAATTTGGCCTCGCGGGACGGGTT
CGGCAGTCCCGTCCCGCATCAGCCTGCTCATTTCCATACTCAGGCTGAAT
CTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCCTTT
ATTTAATTCAAAACCGCCATACGCCATTATTGGGTCAGTCCCGAGTTCAT
CGGGTCACACAGTTGCCTATCGATAGCGTTCACTGCCGAGAGTACACCGG
CACAGGGCCAGTAAAGCTCAAGGTAGTTTTGAACCAGTGCTGCCTTCGCA
GGTCACCATAGACCAATTAATATGCGCCTCTCTTTCCCACACCCACTAAT
GGTATGAAGTGGGCATGTTGAAAGTACGGGCTATGTATAACGTTGCGATT
GTGACTTTATAGTGACCCCCCTATCCCCCGGTTCAGTACAGTACGATAGT
AGAGAATGAAAGCGCGCATTCATATATATTATTCAGAATGTACCGTAGCT
ATTGTAGTAGCGTTTAAAAGTCTGTATATATCAAAACCGTAGGACCATAC
GGTACTGAATTTGCTTTACTCAAAGCCGTCTAGAGATTAATTTGCCGTTT
ATTTTTTACGCTATCGGTTGGTGGACGTGCTCCTCTCTCCCGGCGCGAAC
CTTTGAGAAGTGCACCGACTGTCACTCTCCAGAGACCCTTTGAGCTGGGG
AGTATAAAAAATAACACGAACGTTACGAAAAAGAACGATTAACGAGAAAG
GTTTAGGGGCGAATGGCGTTTCGGTCATGTTAATGTATGGTTACACATAT
TATTGCAGGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGG
TCAGGTAAATAGGGAAAAATAATATTTCCCTCTTCGCGATCGCGCCTGAG
AATTTGGCCTCGCGAGACGGGTTCGGCAGTCCGTCCCGCATCAGCCTGCT
CATTTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCG
AGTTCCGCGGCGGCGTCCTTTATTTAATTCAAAACCGCCATACGCCATTA
TTGGGTCAGTCCCGAGTTCATCGGGTCACACAGTTGCCTATCGATAGCGT
TCACTGCCGAGAGTACACCGGCACAGGGCCAGTAAAGCTCAAGGTAGTTT
TGAACCAGTGCTGCCCTGGCAGGTCACCATAGACCAACTAATATGCGCCT
CTCTTTCCCACACCCACTAATGGTATGAAGTGGGCATGTTGAAAGTACGG
GCTATGTATAACGTTGCGATTGTGACTTTATTATGAGTGACCCTTTCTTA
TAGCCCCCCCCCTCCCTATCCCCCGGTTCAGTACAGTACGGTAGTAGAGA
ATGAAAGTGCGTAAACATATTATTATTCAGAATGTACCGTAGCTACTGTA
ATAGCGTTGAAACGTCTGTAGTTATCCAAACCCTAGGACGATACGTTTAC
ACTCAGCATTTCCCTCAAGATATATATGCATAATCGTGTGAATATAACAC
AATGCATCATCCGTGAAATGAAAAATATCGTTGGACCCGTGCATCCTTGA
TTTCCAATTCTTAGTTTGTTAACTCGGGATAATTGTTGTTGATTTTTTTA
ACTATTTAACAAACTTAAGCCTCGATGTCATTTTGTCGTTGGTCTGTTGG
ATCACGTAAGTACCGATCGATTTTAGCTCGGCAGGCTAACTTTACAGAGA
TATAAAAAGTTTACCGTGAATGTCACAGAGGGCCCGACACAACCGCGTCT
AACAGGATATATTTTTGGTAATGCGTCGATGACACCGCCAAGAAGCGCCT
TTAATATATGTTACAAATATTTCGGTTTCATTTTTACTCTGTGGTGGTGA
GTGTAGTTCAGTACAACAGGCACTAGTCATCCGTACTTTTTCCTAGCGGT
ACGCTCGACAATCCATGGACTTTTCTCTAACGCCGATCGGTTAAAACACG
TCGTCACAATACTGGGGTTGCATCTCGTTCTTATTCCGAAAAAGGTTCTG
TCGAAACTAAGTTAAACCCGGCAGATTGTCTTACTTGATTCCCACCCTGC
TGTGAAAAACTTTCCTCTCTGTGCAATATTTTAATATATTTTCAAGGATA
TCCATTCATTGCAAGGGCCGTAACGTCTTCACCAGAGAACACCAGGCTAG
CGTCTTCAAGGCGGCCTACGAAGAACTACCGGTCCATGTTACTACGCTTC
GTACCCTGGGAAACTTCAAGGCCGCTCTATTGGGCGCAGGCTGTGTGCGA
AAGATTCATGGCATTCAAAAACCACGATCTTTTGAGCTGAAGAGGATGGG
ATCGGACGCGGTGACGGTTGGCATGAAGGAGTACATGCACAGCCCGCGAT
ACTCTGGCTTAACGAAAGCTGGCGTGTTCGAGAGCACGGCTCCATCGTAT
TTTAAGGGTGGTATCCCGACGGTCGAAAATGCCCCTCCGTTCGAACTGAG
GACGGTCGACTCCGAAGTGATTCGTTATATCAAGATGCGCTACAAGGCAG
TGCACTCGAGAGTTGACGCTCTCTTTCCATGCGGTGCGTTGCGTCCGACG
ACTCCAAACAATCAGTCCATTTTCTCAGTTGCTTGTTCGCGTTTGTCAAA
ACGAACTCTCTCGGAATCCTTTATTAAATCGTGTACGTTGAGTGAAATAC
CGGTAAACAACTACTACTTTACAAGATATTAGCAGGGACGGCGAGATCTA
CCTACCTACGGAATACTGAGCGCGTGCGAATTAACTCCCCGGCTTTTTTT
TTCTTCCAGACAAGCAAAAGCAAGAATCAATCAAGGCCGAGATGGATTGT
TCAGCCAACCTCCTGAGCGCGACCGGGTCATGCGAGTTCAACTTGTCGAC
GTGGTGGCTACCTGA back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig888:61726..69990- >mRNA_A-nodosum_M_contig888.10.1 ID=mRNA_A-nodosum_M_contig888.10.1|Name=mRNA_A-nodosum_M_contig888.10.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=177bp|location=Sequence derived from alignment at A-nodosum_M_contig888:61726..69990- (Ascophyllum nodosum dioecious)
ATGCGCCACATGGTTGAGGGTGGCATCGAAGCGAAATTTACTGGAGTGTG
CGTGATTGGAACGCTTACCAGACAAGCAAAAGCAAGAATCAATCAAGGCC
GAGATGGATTGTTCAGCCAACCTCCTGAGCGCGACCGGGTCATGCGAGTT
CAACTTGTCGACGTGGTGGCTACCTGA back to top
|