mRNA_A-nodosum_M_contig887.17.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: D8LTD7_ECTSI (Flagellar associated protein, quinone reductase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTD7_ECTSI) HSP 1 Score: 313 bits (801), Expect = 8.390e-106 Identity = 150/197 (76.14%), Postives = 173/197 (87.82%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPKDDTIPEVDVKNLPDADGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCSSPLIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFFATTCKALKAGRAATA 690
S+YGH+ LA EIK GIEEAGCE V+++CPETLP +LEKMHAPPKD++IPEVDVK+L +ADGILFG PTRFG TQ+K+V+DATG LWQ+G L+GKPAG F ST +QGGGQET+ALTF+TQL HHGM+FVPIG SSPL+FNN+EVHGGS YGAGT+AG DG RMPSDLEK VAKHQGSFFA TCKALKAGRAA+A
Sbjct: 15 SLYGHVNTLAAEIKTGIEEAGCEAVMVRCPETLPADILEKMHAPPKDESIPEVDVKDLVNADGILFGFPTRFGTLPTQMKSVLDATGGLWQSGGLVGKPAGVFISTATQGGGQETSALTFLTQLAHHGMMFVPIGYSSPLLFNNDEVHGGSPYGAGTLAGGDGSRMPSDLEKGVAKHQGSFFAGTCKALKAGRAASA 211
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: A0A835YJD4_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJD4_9STRA) HSP 1 Score: 259 bits (663), Expect = 6.440e-85 Identity = 123/194 (63.40%), Postives = 154/194 (79.38%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPKDDTIPEVDVKNLPDADGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCSSPLIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFFATTCKALKAGRA 681
S+YGHI +AK + G+E GCE VL + PE L + + EKMHAPP+D++IP +VK+LP+ADG +FGI TRFGM+ Q+K++ D+TGSLWQ G L GKPAG F STG+QGGGQETTALT++TQL HHGMIFVP+G ++PL+FN +EVHGGS YGAGT AGPDG R P+ LEK VAKHQG++FA ALK G+A
Sbjct: 11 SLYGHIATMAKSVVEGLEAGGCEVVLCRAPELLSDEIREKMHAPPQDESIPICNVKDLPEADGFIFGIATRFGMSNAQMKSLWDSTGSLWQAGALAGKPAGIFVSTGTQGGGQETTALTWVTQLTHHGMIFVPLGYTTPLLFNMDEVHGGSPYGAGTFAGPDGSRQPTQLEKDVAKHQGTYFAGVVTALKNGKA 204
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: A0A7S4B3E4_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B3E4_CHRCT) HSP 1 Score: 256 bits (654), Expect = 1.360e-83 Identity = 128/182 (70.33%), Postives = 145/182 (79.67%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPKDDTIPEVDVKNLPDADGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCSSPLIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFF 645
SMYGHI +LA E K G+E AGCE LLQ PETLPE VL+KM AP K D P + K+LP DGILFG+PTRFGMAA Q+KA MD+TGSLWQTG L+GKPAG FFST +Q GGQETTALTF+TQL HHGM+FVPIG SSPL+F+ E HGGS YGAGT+AGPDG R P DLE+ VA HQG +F
Sbjct: 12 SMYGHIRSLAVEEKKGLEAAGCEVTLLQVPETLPEEVLKKMGAPDKPDD-PIAEAKDLPSYDGILFGLPTRFGMAAAQMKAFMDSTGSLWQTGALVGKPAGIFFSTATQAGGQETTALTFVTQLTHHGMMFVPIGYSSPLLFDLSEPHGGSPYGAGTLAGPDGSRQPLDLERKVAAHQGEYF 192
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: A0A0G4F8J7_VITBC (Flavodoxin-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8J7_VITBC) HSP 1 Score: 254 bits (649), Expect = 2.680e-82 Identity = 128/197 (64.97%), Postives = 149/197 (75.63%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPKDDTIPEVDVKNLPDADGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCS-SPLIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFFATTCKALKAGRAAT 687
SMYGH+ ALA+E+K G+EEAG EC+L Q ETL + VL+KM APPKD IP VDV LPDADGILFG PTRFG Q+KA+ DATG LWQ G L+GKPAG FFST +Q GGQETTALT +TQ HHGMIFVPIG + + F+ E+HGGS YGAGT AG DG RMPS+ E A+AKHQG +F KA+KAGR +T
Sbjct: 42 SMYGHVRALAQEMKKGVEEAGGECLLYQVAETLSDEVLKKMSAPPKDTDIPVVDVHTLPDADGILFGTPTRFGAMCAQMKAMWDATGGLWQGGKLVGKPAGIFFSTATQAGGQETTALTALTQFTHHGMIFVPIGYTLGEVQFDMSEIHGGSAYGAGTFAGADGSRMPSEKELALAKHQGKYFTNVTKAIKAGRQST 238
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: A0A6V3ADJ7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3ADJ7_HETAK) HSP 1 Score: 239 bits (611), Expect = 1.160e-76 Identity = 124/198 (62.63%), Postives = 146/198 (73.74%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPKDDTIPEVDVKNLPDADGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCSSP-LIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFFATTCKALKAGRAATA 690
SMYGHI A+A ++K G+E +GCE + Q ETLPE VL M AP K + P +DV LP+ADGI+FG+PTRFGM A Q+KA+ DATG LWQ+G L GKPAG FFSTG+QGGGQETTALTF+TQL HHGM+FVP G + P FN EE+HGGS YGAG AG DG R PS+LE A+A QG+ F KAL GRAA A
Sbjct: 10 SMYGHIKAMADKVKEGLESSGCEVQMYQVAETLPEEVLANMGAPAKPED-PVLDVNELPNADGIIFGVPTRFGMMAAQMKAMFDATGGLWQSGALTGKPAGIFFSTGTQGGGQETTALTFVTQLAHHGMLFVPNGYTCPGTQFNMEEIHGGSPYGAGCYAGADGSRQPSELELAMAASQGAHFGGVAKALALGRAAAA 206
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: A0A817BBG4_9BILA (Hypothetical protein n=3 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A817BBG4_9BILA) HSP 1 Score: 240 bits (612), Expect = 1.180e-76 Identity = 126/206 (61.17%), Postives = 145/206 (70.39%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPKDDTIPEVD----VKN---LPDA----DGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCSSPLIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFFATTCKALKAGRAA 684
SMYGH+ LAK I G+E AG E L+Q PETL + VL KMHAP KD TIP + ++N L DA DGILFGIPTRFG QVKAV DATG LW GTL+GKP G FFSTG+QGGGQETT LT +T +HHGM+FVPIG +SPL+ + E+HGGS YGAGT AG DG R P+DLE VA+HQGS+F LK GRAA
Sbjct: 19 SMYGHVATLAKSILKGVEAAGAEARLIQVPETLSKEVLAKMHAPEKDKTIPTISFISGIENTVTLEDALINCDGILFGIPTRFGGMPAQVKAVWDATGGLWMKGTLVGKPIGVFFSTGTQGGGQETTTLTALTNFIHHGMLFVPIGYTSPLLSSMNEIHGGSAYGAGTYAGSDGSRQPTDLELKVAEHQGSYFTQVATVLKLGRAA 224
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: A0A835YWM1_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWM1_9STRA) HSP 1 Score: 239 bits (609), Expect = 1.210e-76 Identity = 112/194 (57.73%), Postives = 148/194 (76.29%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPKDDTIPEVDVKNLPDADGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCSSPLIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFFATTCKALKAGRA 681
S+YGHI A+A+EI+AG++E GC+ V+ + PE L +LEKMHAPP D++IP V +L ADGI+FG+ TRFGMA Q+K++ D+TG +WQ G L+GKPAG F ST +Q GGQET A+T+++QL HHGMIFVP+G ++PL+F +E+ GGS YGAGT AG DG RMPS LEK +A+HQG +FA AL+ G A
Sbjct: 11 SLYGHITAVAREIEAGLKEGGCDVVICRAPELLSAEILEKMHAPPADESIPLCTVADLAGADGIIFGLSTRFGMATAQLKSLWDSTGGMWQAGALVGKPAGVFVSTATQQGGQETAAVTWISQLTHHGMIFVPMGYTTPLLFGMDEIRGGSPYGAGTYAGADGSRMPSQLEKDIAQHQGKYFAGVATALRDGEA 204
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: A0A7S4FA28_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA28_CHRCT) HSP 1 Score: 241 bits (614), Expect = 2.720e-76 Identity = 126/190 (66.32%), Postives = 142/190 (74.74%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPK-DDTIPEVDVKNLPDADGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCSSPLIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFFATTCKAL 666
SMYGH+ LA E K G+E AGCE +LLQ PETL E +L KM APPK DD I + L D DGILFG+PTRFGMAA Q+KA +DATGSLWQ G L GKPAG FFST + GGGQETTALTF+TQL HHGMI+VPIG SSPLIF+ E HGGS YGAGT+AGPDG R+P +LE +A HQG F K L
Sbjct: 99 SMYGHVRTLAVEEKKGLEAAGCEAILLQVPETLTEDILTKMGAPPKADDLI--ANPFELADYDGILFGVPTRFGMAAAQMKAFLDATGSLWQKGALYGKPAGIFFSTATLGGGQETTALTFLTQLSHHGMIYVPIGPSSPLIFDLTEPHGGSAYGAGTLAGPDGSRVPLELECKLAAHQGEQFGMIVKKL 286
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: A0A814FNY1_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A814FNY1_9BILA) HSP 1 Score: 237 bits (605), Expect = 1.230e-75 Identity = 122/206 (59.22%), Postives = 143/206 (69.42%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPKDDTIPEV-------DVKNLPDA----DGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCSSPLIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFFATTCKALKAGRAA 684
SMYGHI LAK I G+E AG E L+Q PETL + VL KMHAP KD T+P + + L DA DGILFG PTRFG QVKA+ DATG LW G+L+GKP G FFSTG+Q GGQETT LT +T +HHGM+FVPIG +SPL+ N +E+HGGS YGAGT AG DG R P+DLE +A+HQGS+F ALK GRAA
Sbjct: 19 SMYGHIATLAKSILKGVEAAGAEARLIQVPETLSKEVLTKMHAPEKDKTVPTISFAPGTENTVTLEDALVNCDGILFGYPTRFGGMPAQVKAIWDATGGLWMKGSLVGKPIGVFFSTGTQAGGQETTTLTSLTNFIHHGMLFVPIGYTSPLLANMDEIHGGSAYGAGTYAGSDGSRKPTDLELKIAEHQGSYFTQVATALKIGRAA 224
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Match: A0A817TQW6_9BILA (Hypothetical protein n=7 Tax=Rotaria TaxID=231623 RepID=A0A817TQW6_9BILA) HSP 1 Score: 236 bits (602), Expect = 4.250e-75 Identity = 126/206 (61.17%), Postives = 143/206 (69.42%), Query Frame = 1
Query: 100 SMYGHILALAKEIKAGIEEAGCECVLLQCPETLPEGVLEKMHAPPKDDTIPEVD----VKN-------LPDADGILFGIPTRFGMAATQVKAVMDATGSLWQTGTLIGKPAGTFFSTGSQGGGQETTALTFMTQLVHHGMIFVPIGCSSPLIFNNEEVHGGSCYGAGTIAGPDGKRMPSDLEKAVAKHQGSFFATTCKALKAGRAA 684
S YGH+ LAK I G+E AG E L+Q PETL + VL KMHAP KD TIP + V N L + DGILFG PTRFG QVKAV DATG LW G L+GKP G FFSTGSQGGGQETTALT +T VHHGM+FVPIG +SPL+ N +EVHGGS YGAGTIA +G R PS+LE +A+HQGS+F ALK GRAA
Sbjct: 31 STYGHVATLAKNILKGVEAAGAEGHLIQVPETLSKEVLGKMHAPDKDSTIPTISFVPGVANTVTVEDALVNCDGILFGFPTRFGGIPAQVKAVWDATGGLWMKGALVGKPIGVFFSTGSQGGGQETTALTSLTNYVHHGMLFVPIGYTSPLLGNIDEVHGGSAYGAGTIASSNGSRQPSELELKLAQHQGSYFTQVATALKVGRAA 236 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig887.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig887.17.1 >prot_A-nodosum_M_contig887.17.1 ID=prot_A-nodosum_M_contig887.17.1|Name=mRNA_A-nodosum_M_contig887.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=231bp MDKWHRGVERERKHSTAPGDARTFVNPTCNSSASMYGHILALAKEIKAGIback to top mRNA from alignment at A-nodosum_M_contig887:255324..259256+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig887.17.1 ID=mRNA_A-nodosum_M_contig887.17.1|Name=mRNA_A-nodosum_M_contig887.17.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3933bp|location=Sequence derived from alignment at A-nodosum_M_contig887:255324..259256+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig887:255324..259256+ >mRNA_A-nodosum_M_contig887.17.1 ID=mRNA_A-nodosum_M_contig887.17.1|Name=mRNA_A-nodosum_M_contig887.17.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=693bp|location=Sequence derived from alignment at A-nodosum_M_contig887:255324..259256+ (Ascophyllum nodosum dioecious)back to top |