mRNA_A-nodosum_M_contig885.31.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: D8LBF3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF3_ECTSI) HSP 1 Score: 380 bits (975), Expect = 1.710e-127 Identity = 218/365 (59.73%), Postives = 260/365 (71.23%), Query Frame = 1
Query: 16 DNNELLEEFEEPLNDEANQGQMESERNAADPLNIFLQAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEERRKTEE 1110
DN+ +E++ + LND + + ++ RNAA+ L+ LQAP+A D+SNARLIEELE RN+R+SGFRDQD++TLQK L+ EFE+EKESI+KHQREKREQAAKQAGLQRKRMMLE+QLREEISEI KD RIEFWL LVKQN+TP +ARI+VNS+TARALAK+MWTNTSLTSLDLS +GIDD AG Y+ARLLK T GA+ SG+QAL DM KN+TL S+NLWRCALGAEAG AL+RG+ESNHTITFLEVG NGLA+ADQ ++K AL+ N +RFE+ Q VRR E IAD ILA E A++ QLRA AEERRK EE
Sbjct: 3 DNDAFMEDYGDSLNDAGDPYETKTTRNAAEALDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLNLVKQNATPPTARIDVNSVTARALAKSMWTNTSLTSLDLSRNGIDDAAGTYVARLLKRNTALVNVALGSNQLGVFACRAFGESLCSNSTLKCLSLESNSLTSDGANMSGIQALTDMFSKNSTLTSVNLWRCALGAEAGVALSRGMESNHTITFLEVGLNGLAMADQHKVKTALENNFKRFEECQAVRRQELSIADKILAEEKAMQEQLRAXXXXXXXXXXXXXXXAEERRKAEE 367
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A835YIK2_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK2_9STRA) HSP 1 Score: 258 bits (658), Expect = 2.040e-79 Identity = 200/332 (60.24%), Postives = 241/332 (72.59%), Query Frame = 1
Query: 121 LQAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEERRKTEENR 1116
LQAP+A D+SNARLIEELE R R +GFRDQD++ LQK L+ EFE EKE +++ EK+EQA K+AGLQR+R LEKQL EE E+ ++ + WL+LVKQ+ TPL+ARIEVNSI+ARALAKAMWTNTSLTSLDL+ + +DD AGAY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T G +G + + L KN L S+NLWRC LG AG L GI++N TITFLE+G+N LA++D QI A + N ++ LQ+ +Q D IL E + LR EREL +WLE Q+ LRAEERR EE R
Sbjct: 46 LQAPNANDFSNARLIEELEGRRMRPTGFRDQDIIALQKVLDAEFEQEKEHLIRQHNEKKEQAMKEAGLQRRRAQLEKQLTEEKQEVAQNKIVAGWLSLVKQDETPLTARIEVNSISARALAKAMWTNTSLTSLDLARNNLDDFAGAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTNEGEKPAGFRYMVQALSKNAALTSLNLWRCGLGTPAGHDLAAGIQANRTITFLELGNNSLALSDLRQIGARVKDNRCHYDALQQQAMAKQREQDRILQEEKKAQDLLRKERELHDWLEAQRLLRAEERRAEEEER 377
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A6H5JI07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI07_9PHAE) HSP 1 Score: 170 bits (430), Expect = 1.530e-48 Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 1
Query: 16 DNNELLEEFEEPLNDEANQGQMESERNAADPLNIFLQAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLV 417
DN+ +E++ + LND + + ++ RNAA+ L+ LQAP+A D+SNARLIEELE RN+R+SGFRDQD++TLQK L+ EFE+EKESI+KHQREKREQAAKQAGLQRKRMMLE+QLREEISEI KD RIEFWL LV
Sbjct: 3 DNDAFMEDYGDSLNDAGDPYEPKTTRNAAEALDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLHLV 136
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: F0Y577_AURAN (F-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y577_AURAN) HSP 1 Score: 177 bits (449), Expect = 1.200e-45 Identity = 163/312 (52.24%), Postives = 207/312 (66.35%), Query Frame = 1
Query: 160 LIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEER 1095
L+ E+E R+ GF + D LQK+ +QE E E I + +RE+R+++ +A LQ+KR+ LEKQLREE + D +IE WL++V+ + T SARI VNS+TARALAKAMW N SLTSLDLS + + D AGA I R+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT D +GV ALA L N +L +NLWRC LG AG L + + N +I L+VG+NG+ VAD+ +I +DAN + + Q A A+ + + REL EW++ QK LRA ER
Sbjct: 52 LVTEMERRHLHPKGFFNDDAKELQKYFDQEHFKELEKIKEERREQRQRSXMKAQLQKKRLQLEKQLREEQDAVANDPQIEAWLSVVRSDQTRPSARIGVNSVTARALAKAMWNNKSLTSLDLSRNDLSDFAGAQIGRMLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNESTDQTGVVALAQALSSNASLTLLNLWRCDLGTTAGAELAKALHLNSSIINLDVGNNGVLVADKRRIADKVDANKKETRAIALQNHAFQEQLRKEAAGRQAIADEEQKARELEEWMDAQKDLRAAER 363
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A7S3XPA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPA2_HETAK) HSP 1 Score: 167 bits (422), Expect = 4.280e-44 Identity = 159/334 (47.60%), Postives = 208/334 (62.28%), Query Frame = 1
Query: 124 QAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHG-ADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEERRKTEENRSA 1122
Q DA +N L ELE+R + GF D LQK+ + E E +K + E++E+ A QAGL R++ ++EKQL+EE+ I++D R E WL LV+ ++TP AR+E+ S+ AR LAKA+W N SL SLDLS +G+DD+AGA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T+ G A+ +G ADML NNTL S+NL+RC LG EAGT L G+E N ++ FL+VG N + +I + N L+ + A + ER+ ++WLE+QKQ RAEER E +A
Sbjct: 47 QPRDALRLTNDELNAELEMRGEKPKGFFTDDAKVLQKYFDVEHEEYLAKQMKERAEQQEKLAAQAGLIRRKRLVEKQLKEELLAIQRDRRAEHWLALVRGDATPPQARVELGSVAARCLAKALWGNGSLVSLDLSRNGLDDKAGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTESGLAEKTGAPEFADMLKHNNTLTSLNLFRCHLGPEAGTELLGGLEQNASLVFLDVGGNHFLQSHDARINGKIQENQSLRADLKSQAKQAAEKRSKEEAEXXXXXXXXQKERDTKQWLEEQKQKRAEERSMATEEAAA 380
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A7R9VZE3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZE3_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.530e-35 Identity = 96/282 (34.04%), Postives = 147/282 (52.13%), Query Frame = 1
Query: 82 ESERNAADPLNIFLQAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAAL 927
E ER+ +PL L DA + L++ELE R + GF D LQ+ ++E E+ E+ + +RE RE AK+A QR+R+++E ++REE EI +D R++ WL L ++ P +RIEVN+I+AR+LAKA+ T++S+ LD+S G+ D AGAY+ R L+ T D SG+ A+A+ML KN L ++LWRC GA++G A+ + N +T +EVG+NG + + A L
Sbjct: 35 EDERDDDEPLVHKL---DANALTLNELVQELEKRGLQARGFFADDAKVLQEKFDEEHELYVEAKRREKREAREADAKRAAEQRRRLLMETEVREEREEIGRDRRMKSWLLLTEEGMAPPHSRIEVNNISARSLAKALLTDSSILCLDVSNLGLSDLAGAYLCRALRSNRTLIKIELGSNKFGPKTCKSLGDALTSNNVVRFVSLESNPLTGEKNDISGIIAIAEMLSKNKALRYLSLWRCGTGADSGKAIADAMAFNDALTCIEVGYNGWENSHTSHVAAKL 313
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A7S3ZT07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT07_9STRA) HSP 1 Score: 139 bits (351), Expect = 5.210e-34 Identity = 125/261 (47.89%), Postives = 160/261 (61.30%), Query Frame = 1
Query: 133 DATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQI 915
DA + L+ E E R GF + D LQK L++EF E + +R ++ +A LQ+KR+ LEKQLREE I + WL +K N T + RIE +SI RALAKA+W+++S+T LDLS +G+ D AGA + R+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T D +GV ALA LG N TL +N+WRC LG AG A+ + +N T+ +VGH G+ D +I
Sbjct: 42 DAFEMKMEDLVVEFERRGMHPKGFFNDDARELQKVLDKEFSENLEKLKAEKRAALQRNRMKAKLQKKRLQLEKQLREEQDAIHDSLDAKAWLNTIKNNQTRDACRIECDSIVCRALAKALWSSSSITCLDLSRNGLSDFAGAQLGRMLKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMETNPLTNESTDQTGVVALAKALGSNTTLTRLNMWRCDLGTAAGAAIADALVANETLIDFDVGHGGILELDAQRI 302
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A482S097_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S097_9ARCH) HSP 1 Score: 135 bits (341), Expect = 3.940e-33 Identity = 134/297 (45.12%), Postives = 189/297 (63.64%), Query Frame = 1
Query: 226 LQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEERRKTEENR 1116
LQ+ +EF+ E E +RE+ + A+Q GL+++R+ +E+ L+EE E+ ++ +I + ++K+N S RI V S++AR+LAKAMW N ++T LDLS + + D AG Y+AR+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +D SG+ +LA+ L N T+ S+NLWR + G L +E N T+ F + GHN + + D +I LDAN+ +FE + VRR + + Q E EL++WLE+++ R+E R EE R
Sbjct: 2 LQRAFEEEFKSELEQRRAKRREQLRKDAQQRGLRQRRLDMERSLQEEQDELARNHQIGMMIDMIKENMMGTSLRINVTSVSARSLAKAMWINDTITCLDLSSNDLSDHAGCYLARILKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIASE-SDLSGLTSLANALKMNKTITSLNLWRTNIPEAGGNILASALEVNETLLFCDTGHNFIEIGDVKKITDKLDANLAQFEANERVRRRHEEVRGQQRXXXXXXXSQRSKEVELKKWLEERRDHRSENLRLNEEMR 297
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: H3GCU2_PHYRM (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GCU2_PHYRM) HSP 1 Score: 130 bits (326), Expect = 2.310e-30 Identity = 137/319 (42.95%), Postives = 191/319 (59.87%), Query Frame = 1
Query: 130 PDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQ----EVRRHEQGIADMILARENALKHQLRAERELREWLEQQK 1074
PDA + + E+ R + GF + D LQ+ N+E EK+S ++ + + ++ + + R+R+ EK++REE+ EI K+ ++E WL L K + TP A + V+SI ARAL K + SL SL+LS + +DD G ++A LLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T D SGV AL +MLGKN TL ++NLWR LG E G + G+ N T+ L+VG+N + +D + L N FEQ Q + R + AD R++ L +L E+ W++++K
Sbjct: 48 PDAFALAQNEIRREMIDRGIQPKGFYNDDAARLQEEFNREHASEKDSRMQQKVQFAAKSYLRETVHRRRLEREKEVREEVEEIAKNPQLEVWLGLAKADETPRHADLRVSSIGARALCKTLAFTHSLRSLNLSRNALDDATGKWLALLLKRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTDEEKDFSGVAALGNMLGKNKTLRTLNLWRTRLGGEGGKQVALGLARNTTLVCLDVGNNRIGTSDAVALDVQLKKNRVLFEQAQFQQQKFREAQWNAADKERERQDKLAKRLEDEK----WMDKRK 362
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A3R7IFG4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IFG4_9STRA) HSP 1 Score: 131 bits (330), Expect = 9.260e-30 Identity = 146/335 (43.58%), Postives = 200/335 (59.70%), Query Frame = 1
Query: 130 PDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFE--QLQEVRRHEQGIADMILA-RENALKHQLRAERELREWLEQQKQLRAEERRKTEENRSAM 1125
PDA + + E+ R + GF + D LQ+ N+E EK+S ++ + + ++ + + R+R+ EK++REE+ EI K+ ++E WL L K + TP A + VNSI ARAL K + SL SL+LS + +DD G ++A LLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T D SGV AL +ML KN TL ++NLWR LG+E G L I N ++ L+VG+N +A AD + L N FE QLQ+++ E A A +E + L +E EW+E++K R ++R EE R +
Sbjct: 687 PDAFALAQNEIRREMIDRGIQPKGFYNDDAARLQEEFNREHAAEKDSRVQQKVQFAAKSYLRETVHRRRLEREKEVREEVEEIAKNPQLEVWLGLAKADETPKHADLRVNSIGARALCKTLAFTHSLRSLNLSRNALDDATGKWLALLLKRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTDDEKDFSGVAALGNMLTKNKTLRTLNLWRTRLGSEGGKQLALYIARNSSLVCLDVGNNRIATADAVSLDVQLKKNRVLFEEQQLQQLKYRE---AQWRAADKERERQDNLAKRQEDEEWMEKRKLEREQDRTFLEEERKRL 1018 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig885.31.1 >prot_A-nodosum_M_contig885.31.1 ID=prot_A-nodosum_M_contig885.31.1|Name=mRNA_A-nodosum_M_contig885.31.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=377bp MAISDDNNELLEEFEEPLNDEANQGQMESERNAADPLNIFLQAPDATDYSback to top mRNA from alignment at A-nodosum_M_contig885:296180..297966- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig885.31.1 ID=mRNA_A-nodosum_M_contig885.31.1|Name=mRNA_A-nodosum_M_contig885.31.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1787bp|location=Sequence derived from alignment at A-nodosum_M_contig885:296180..297966- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig885:296180..297966- >mRNA_A-nodosum_M_contig885.31.1 ID=mRNA_A-nodosum_M_contig885.31.1|Name=mRNA_A-nodosum_M_contig885.31.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1131bp|location=Sequence derived from alignment at A-nodosum_M_contig885:296180..297966- (Ascophyllum nodosum dioecious)back to top |