mRNA_A-nodosum_M_contig885.31.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig885.31.1
Unique NamemRNA_A-nodosum_M_contig885.31.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: D8LBF3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF3_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 1.710e-127
Identity = 218/365 (59.73%), Postives = 260/365 (71.23%), Query Frame = 1
Query:   16 DNNELLEEFEEPLNDEANQGQMESERNAADPLNIFLQAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEERRKTEE 1110
            DN+  +E++ + LND  +  + ++ RNAA+ L+  LQAP+A D+SNARLIEELE RN+R+SGFRDQD++TLQK L+ EFE+EKESI+KHQREKREQAAKQAGLQRKRMMLE+QLREEISEI KD RIEFWL LVKQN+TP +ARI+VNS+TARALAK+MWTNTSLTSLDLS +GIDD AG Y+ARLLK                                           T  GA+ SG+QAL DM  KN+TL S+NLWRCALGAEAG AL+RG+ESNHTITFLEVG NGLA+ADQ ++K AL+ N +RFE+ Q VRR E  IAD ILA E A++ QLRA               AEERRK EE
Sbjct:    3 DNDAFMEDYGDSLNDAGDPYETKTTRNAAEALDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLNLVKQNATPPTARIDVNSVTARALAKSMWTNTSLTSLDLSRNGIDDAAGTYVARLLKRNTALVNVALGSNQLGVFACRAFGESLCSNSTLKCLSLESNSLTSDGANMSGIQALTDMFSKNSTLTSVNLWRCALGAEAGVALSRGMESNHTITFLEVGLNGLAMADQHKVKTALENNFKRFEECQAVRRQELSIADKILAEEKAMQEQLRAXXXXXXXXXXXXXXXAEERRKAEE 367          
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A835YIK2_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK2_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.040e-79
Identity = 200/332 (60.24%), Postives = 241/332 (72.59%), Query Frame = 1
Query:  121 LQAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEERRKTEENR 1116
            LQAP+A D+SNARLIEELE R  R +GFRDQD++ LQK L+ EFE EKE +++   EK+EQA K+AGLQR+R  LEKQL EE  E+ ++  +  WL+LVKQ+ TPL+ARIEVNSI+ARALAKAMWTNTSLTSLDL+ + +DD AGAY      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  T  G   +G + +   L KN  L S+NLWRC LG  AG  L  GI++N TITFLE+G+N LA++D  QI A +  N   ++ LQ+    +Q   D IL  E   +  LR EREL +WLE Q+ LRAEERR  EE R
Sbjct:   46 LQAPNANDFSNARLIEELEGRRMRPTGFRDQDIIALQKVLDAEFEQEKEHLIRQHNEKKEQAMKEAGLQRRRAQLEKQLTEEKQEVAQNKIVAGWLSLVKQDETPLTARIEVNSISARALAKAMWTNTSLTSLDLARNNLDDFAGAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTNEGEKPAGFRYMVQALSKNAALTSLNLWRCGLGTPAGHDLAAGIQANRTITFLELGNNSLALSDLRQIGARVKDNRCHYDALQQQAMAKQREQDRILQEEKKAQDLLRKERELHDWLEAQRLLRAEERRAEEEER 377          
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A6H5JI07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI07_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.530e-48
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 1
Query:   16 DNNELLEEFEEPLNDEANQGQMESERNAADPLNIFLQAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLV 417
            DN+  +E++ + LND  +  + ++ RNAA+ L+  LQAP+A D+SNARLIEELE RN+R+SGFRDQD++TLQK L+ EFE+EKESI+KHQREKREQAAKQAGLQRKRMMLE+QLREEISEI KD RIEFWL LV
Sbjct:    3 DNDAFMEDYGDSLNDAGDPYEPKTTRNAAEALDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLHLV 136          
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: F0Y577_AURAN (F-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y577_AURAN)

HSP 1 Score: 177 bits (449), Expect = 1.200e-45
Identity = 163/312 (52.24%), Postives = 207/312 (66.35%), Query Frame = 1
Query:  160 LIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEER 1095
            L+ E+E R+    GF + D   LQK+ +QE   E E I + +RE+R+++  +A LQ+KR+ LEKQLREE   +  D +IE WL++V+ + T  SARI VNS+TARALAKAMW N SLTSLDLS + + D AGA I R+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT    D +GV ALA  L  N +L  +NLWRC LG  AG  L + +  N +I  L+VG+NG+ VAD+ +I   +DAN +    +       Q       A   A+  + +  REL EW++ QK LRA ER
Sbjct:   52 LVTEMERRHLHPKGFFNDDAKELQKYFDQEHFKELEKIKEERREQRQRSXMKAQLQKKRLQLEKQLREEQDAVANDPQIEAWLSVVRSDQTRPSARIGVNSVTARALAKAMWNNKSLTSLDLSRNDLSDFAGAQIGRMLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNESTDQTGVVALAQALSSNASLTLLNLWRCDLGTTAGAELAKALHLNSSIINLDVGNNGVLVADKRRIADKVDANKKETRAIALQNHAFQEQLRKEAAGRQAIADEEQKARELEEWMDAQKDLRAAER 363          
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A7S3XPA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPA2_HETAK)

HSP 1 Score: 167 bits (422), Expect = 4.280e-44
Identity = 159/334 (47.60%), Postives = 208/334 (62.28%), Query Frame = 1
Query:  124 QAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHG-ADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEERRKTEENRSA 1122
            Q  DA   +N  L  ELE+R  +  GF   D   LQK+ + E E      +K + E++E+ A QAGL R++ ++EKQL+EE+  I++D R E WL LV+ ++TP  AR+E+ S+ AR LAKA+W N SL SLDLS +G+DD+AGA+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  T+ G A+ +G    ADML  NNTL S+NL+RC LG EAGT L  G+E N ++ FL+VG N    +   +I   +  N      L+   +          A         + ER+ ++WLE+QKQ RAEER    E  +A
Sbjct:   47 QPRDALRLTNDELNAELEMRGEKPKGFFTDDAKVLQKYFDVEHEEYLAKQMKERAEQQEKLAAQAGLIRRKRLVEKQLKEELLAIQRDRRAEHWLALVRGDATPPQARVELGSVAARCLAKALWGNGSLVSLDLSRNGLDDKAGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTESGLAEKTGAPEFADMLKHNNTLTSLNLFRCHLGPEAGTELLGGLEQNASLVFLDVGGNHFLQSHDARINGKIQENQSLRADLKSQAKQAAEKRSKEEAEXXXXXXXXQKERDTKQWLEEQKQKRAEERSMATEEAAA 380          
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A7R9VZE3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZE3_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.530e-35
Identity = 96/282 (34.04%), Postives = 147/282 (52.13%), Query Frame = 1
Query:   82 ESERNAADPLNIFLQAPDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAAL 927
            E ER+  +PL   L   DA   +   L++ELE R  +  GF   D   LQ+  ++E E+  E+  + +RE RE  AK+A  QR+R+++E ++REE  EI +D R++ WL L ++   P  +RIEVN+I+AR+LAKA+ T++S+  LD+S  G+ D AGAY+ R L+                                           T    D SG+ A+A+ML KN  L  ++LWRC  GA++G A+   +  N  +T +EVG+NG   +    + A L
Sbjct:   35 EDERDDDEPLVHKL---DANALTLNELVQELEKRGLQARGFFADDAKVLQEKFDEEHELYVEAKRREKREAREADAKRAAEQRRRLLMETEVREEREEIGRDRRMKSWLLLTEEGMAPPHSRIEVNNISARSLAKALLTDSSILCLDVSNLGLSDLAGAYLCRALRSNRTLIKIELGSNKFGPKTCKSLGDALTSNNVVRFVSLESNPLTGEKNDISGIIAIAEMLSKNKALRYLSLWRCGTGADSGKAIADAMAFNDALTCIEVGYNGWENSHTSHVAAKL 313          
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A7S3ZT07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT07_9STRA)

HSP 1 Score: 139 bits (351), Expect = 5.210e-34
Identity = 125/261 (47.89%), Postives = 160/261 (61.30%), Query Frame = 1
Query:  133 DATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQI 915
            DA +     L+ E E R     GF + D   LQK L++EF    E +   +R   ++   +A LQ+KR+ LEKQLREE   I      + WL  +K N T  + RIE +SI  RALAKA+W+++S+T LDLS +G+ D AGA + R+LK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       T    D +GV ALA  LG N TL  +N+WRC LG  AG A+   + +N T+   +VGH G+   D  +I
Sbjct:   42 DAFEMKMEDLVVEFERRGMHPKGFFNDDARELQKVLDKEFSENLEKLKAEKRAALQRNRMKAKLQKKRLQLEKQLREEQDAIHDSLDAKAWLNTIKNNQTRDACRIECDSIVCRALAKALWSSSSITCLDLSRNGLSDFAGAQLGRMLKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMETNPLTNESTDQTGVVALAKALGSNTTLTRLNMWRCDLGTAAGAAIADALVANETLIDFDVGHGGILELDAQRI 302          
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A482S097_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S097_9ARCH)

HSP 1 Score: 135 bits (341), Expect = 3.940e-33
Identity = 134/297 (45.12%), Postives = 189/297 (63.64%), Query Frame = 1
Query:  226 LQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAERELREWLEQQKQLRAEERRKTEENR 1116
            LQ+   +EF+ E E     +RE+  + A+Q GL+++R+ +E+ L+EE  E+ ++ +I   + ++K+N    S RI V S++AR+LAKAMW N ++T LDLS + + D AG Y+AR+LK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +D SG+ +LA+ L  N T+ S+NLWR  +    G  L   +E N T+ F + GHN + + D  +I   LDAN+ +FE  + VRR  + +             Q   E EL++WLE+++  R+E  R  EE R
Sbjct:    2 LQRAFEEEFKSELEQRRAKRREQLRKDAQQRGLRQRRLDMERSLQEEQDELARNHQIGMMIDMIKENMMGTSLRINVTSVSARSLAKAMWINDTITCLDLSSNDLSDHAGCYLARILKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIASE-SDLSGLTSLANALKMNKTITSLNLWRTNIPEAGGNILASALEVNETLLFCDTGHNFIEIGDVKKITDKLDANLAQFEANERVRRRHEEVRGQQRXXXXXXXSQRSKEVELKKWLEERRDHRSENLRLNEEMR 297          
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: H3GCU2_PHYRM (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GCU2_PHYRM)

HSP 1 Score: 130 bits (326), Expect = 2.310e-30
Identity = 137/319 (42.95%), Postives = 191/319 (59.87%), Query Frame = 1
Query:  130 PDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFEQLQ----EVRRHEQGIADMILARENALKHQLRAERELREWLEQQK 1074
            PDA   +   +  E+  R  +  GF + D   LQ+  N+E   EK+S ++ + +   ++  +  + R+R+  EK++REE+ EI K+ ++E WL L K + TP  A + V+SI ARAL K +    SL SL+LS + +DD  G ++A LLK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  T    D SGV AL +MLGKN TL ++NLWR  LG E G  +  G+  N T+  L+VG+N +  +D   +   L  N   FEQ Q    + R  +   AD    R++ L  +L  E+    W++++K
Sbjct:   48 PDAFALAQNEIRREMIDRGIQPKGFYNDDAARLQEEFNREHASEKDSRMQQKVQFAAKSYLRETVHRRRLEREKEVREEVEEIAKNPQLEVWLGLAKADETPRHADLRVSSIGARALCKTLAFTHSLRSLNLSRNALDDATGKWLALLLKRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTDEEKDFSGVAALGNMLGKNKTLRTLNLWRTRLGGEGGKQVALGLARNTTLVCLDVGNNRIGTSDAVALDVQLKKNRVLFEQAQFQQQKFREAQWNAADKERERQDKLAKRLEDEK----WMDKRK 362          
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Match: A0A3R7IFG4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IFG4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 9.260e-30
Identity = 146/335 (43.58%), Postives = 200/335 (59.70%), Query Frame = 1
Query:  130 PDATDYSNARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKREQAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARIEVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQHGADSSGVQALADMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVADQCQIKAALDANIQRFE--QLQEVRRHEQGIADMILA-RENALKHQLRAERELREWLEQQKQLRAEERRKTEENRSAM 1125
            PDA   +   +  E+  R  +  GF + D   LQ+  N+E   EK+S ++ + +   ++  +  + R+R+  EK++REE+ EI K+ ++E WL L K + TP  A + VNSI ARAL K +    SL SL+LS + +DD  G ++A LLK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  T    D SGV AL +ML KN TL ++NLWR  LG+E G  L   I  N ++  L+VG+N +A AD   +   L  N   FE  QLQ+++  E   A    A +E   +  L   +E  EW+E++K  R ++R   EE R  +
Sbjct:  687 PDAFALAQNEIRREMIDRGIQPKGFYNDDAARLQEEFNREHAAEKDSRVQQKVQFAAKSYLRETVHRRRLEREKEVREEVEEIAKNPQLEVWLGLAKADETPKHADLRVNSIGARALCKTLAFTHSLRSLNLSRNALDDATGKWLALLLKRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTDDEKDFSGVAALGNMLTKNKTLRTLNLWRTRLGSEGGKQLALYIARNSSLVCLDVGNNRIATADAVSLDVQLKKNRVLFEEQQLQQLKYRE---AQWRAADKERERQDNLAKRQEDEEWMEKRKLEREQDRTFLEEERKRL 1018          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig885.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LBF3_ECTSI1.710e-12759.73Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835YIK2_9STRA2.040e-7960.24Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A6H5JI07_9PHAE1.530e-4869.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0Y577_AURAN1.200e-4552.24F-box domain-containing protein n=1 Tax=Aureococcu... [more]
A0A7S3XPA2_HETAK4.280e-4447.60Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9VZE3_9STRA1.530e-3534.04Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3ZT07_9STRA5.210e-3447.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A482S097_9ARCH3.940e-3345.12Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
H3GCU2_PHYRM2.310e-3042.95Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A3R7IFG4_9STRA9.260e-3043.58Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig885contigA-nodosum_M_contig885:296180..297966 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LBF3
PFAMsLRR_6
Model size1131
Max annot lvl2759|Eukaryota
KEGG koko:K17576
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.81e-128
EggNOG OGsKOG4308@1|root,KOG4308@2759|Eukaryota
Descriptioninterleukin-8 biosynthetic process
Cds size1131
COG categoryS
BRITEko00000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870298.797313-CDS-A-nodosum_M_contig885:296179..2968961680870298.797313-CDS-A-nodosum_M_contig885:296179..296896Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig885 296180..296896 -
1680870298.817166-CDS-A-nodosum_M_contig885:297256..2974991680870298.817166-CDS-A-nodosum_M_contig885:297256..297499Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig885 297257..297499 -
1680870298.8329873-CDS-A-nodosum_M_contig885:297795..2979661680870298.8329873-CDS-A-nodosum_M_contig885:297795..297966Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig885 297796..297966 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig885.31.1prot_A-nodosum_M_contig885.31.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig885 296180..297966 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig885.31.1

>prot_A-nodosum_M_contig885.31.1 ID=prot_A-nodosum_M_contig885.31.1|Name=mRNA_A-nodosum_M_contig885.31.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=377bp
MAISDDNNELLEEFEEPLNDEANQGQMESERNAADPLNIFLQAPDATDYS
NARLIEELEIRNARISGFRDQDLLTLQKFLNQEFEVEKESILKHQREKRE
QAAKQAGLQRKRMMLEKQLREEISEIEKDDRIEFWLTLVKQNSTPLSARI
EVNSITARALAKAMWTNTSLTSLDLSCSGIDDQAGAYIARLLKRNTALGT
LSLGSNQLGTSACRAFGDSLCSNTTLRSLSLESNRLTQHGADSSGVQALA
DMLGKNNTLISINLWRCALGAEAGTALTRGIESNHTITFLEVGHNGLAVA
DQCQIKAALDANIQRFEQLQEVRRHEQGIADMILARENALKHQLRAEREL
REWLEQQKQLRAEERRKTEENRSAMT*
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mRNA from alignment at A-nodosum_M_contig885:296180..297966-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig885.31.1 ID=mRNA_A-nodosum_M_contig885.31.1|Name=mRNA_A-nodosum_M_contig885.31.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1787bp|location=Sequence derived from alignment at A-nodosum_M_contig885:296180..297966- (Ascophyllum nodosum dioecious)
ATGGCGATCAGCGACGATAATAACGAGCTTTTGGAAGAGTTCGAAGAACC CTTGAACGACGAAGCCAACCAGGGGCAAATGGAAAGCGAGCGCAATGCAG CTGATCCATTGAATATCTTTCTTCAAGCTCCAGACGCGACTGATTACTCT AATGCACGGTTGATAGAGGAGGTGAGACATTCGCCGCGGCCTTCGAGAGA AGAGGCACTGTCAAAAATGTAGTACCAGTACCTGGTATTACAGTACATTA CTGTACACTCTATTAATATAATAGCACTTCGTACTCGTACACTCTATTAA TGTAATGTACTCTATACTACATCATTGTCGAAAGTCGGCGGTTTTCCTCT TCTTGCCTCTCGTTTTTGTTACAGCAGCAGCAGTAGCATAATAAAGCATA CCGCATTATACTACATCAATAGTTATATAACACCTGGTGTATTCTGAACA CGACGCCGCTCGTTTAGCTCGAGATCAGGAATGCTCGCATCAGCGGGTTT CGGGACCAAGACTTGTTGACCCTTCAGAAATTTTTGAACCAAGAATTCGA GGTAGAAAAGGAGAGTATATTGAAGCATCAGCGGGAGAAGAGGGAACAGG CGGCGAAGCAAGCGGGTTTGCAACGGAAGCGCATGATGCTGGAGAAGCAA TTAAGAGAAGAAATCTCAGAGATCGAGAAAGATGATCGGATTGAGTTTTG GCTGACCCTGGTAAGACCTTGTTTTTTCAACCACCGTTGCCCTCATCATC ATTCACGACATCGCCCATGGCTATGATGGATCTCCAGCGAACATCTACAC GACACCATTCCTAACCACAACCACGTAATATCGAGCAACAGTTTGCCCTC ATCGGTATATTTTTTTAAAGTTCCCCCCCCCCCTACATAGAATACATGAG TTTGATAGAATACATGGGTTTGTTGCAACCCGTGATCATTTTTATCCACC GAGCGTGCTCTCTTCAAGCAGTACTTTTTGAGTGTAGGATAGTTCCTTCA GGTAACACCTGCCTGGGGCCTATTTCCCAAAGGAGCTTCCTTCATCCTGT CGCAATGCCTGTATCATTAGGTAAAACAAAATTCGACACCTCTATCAGCT AGGATTGAAGTTAATTCAATCACAGCTCGGGCGCTCGCAAAGGCCATGTG GACAAACACTTCACTTACCAGCCTGGACCTGTCGTGCAGCGGCATCGACG ATCAGGCCGGCGCATATATAGCACGTCTCCTCAAACGTAACACCGCTTTG GGGACTCTTTCGCTAGGCTCGAACCAACTCGGTACCTCTGCATGCCGAGC TTTTGGAGACTCTTTGTGCTCAAACACCACGCTGAGGTCGTTGAGTCTCG AGTCAAATCGCTTGACTCAACATGGTGCGGACTCGTCAGGTGTTCAAGCC CTTGCAGACATGTTGGGGAAGAACAACACGCTGATCTCAATCAATCTTTG GAGGTGCGCCCTTGGGGCTGAGGCGGGTACAGCTTTGACCCGTGGCATAG AGTCAAACCATACTATTACTTTTCTCGAGGTGGGCCACAACGGTCTGGCG GTGGCAGACCAGTGTCAGATCAAGGCTGCCCTAGACGCAAATATCCAAAG GTTTGAACAACTACAAGAGGTACGCCGCCACGAGCAGGGCATCGCGGACA TGATTTTAGCCAGGGAGAATGCCCTCAAGCATCAGCTGCGCGCTGAACGT GAGCTACGCGAATGGCTGGAGCAACAGAAGCAGCTGCGTGCCGAGGAGCG GCGAAAAACAGAGGAAAATAGGTCAGCTATGACGTGA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig885:296180..297966-

>mRNA_A-nodosum_M_contig885.31.1 ID=mRNA_A-nodosum_M_contig885.31.1|Name=mRNA_A-nodosum_M_contig885.31.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1131bp|location=Sequence derived from alignment at A-nodosum_M_contig885:296180..297966- (Ascophyllum nodosum dioecious)
ATGGCGATCAGCGACGATAATAACGAGCTTTTGGAAGAGTTCGAAGAACC
CTTGAACGACGAAGCCAACCAGGGGCAAATGGAAAGCGAGCGCAATGCAG
CTGATCCATTGAATATCTTTCTTCAAGCTCCAGACGCGACTGATTACTCT
AATGCACGGTTGATAGAGGAGCTCGAGATCAGGAATGCTCGCATCAGCGG
GTTTCGGGACCAAGACTTGTTGACCCTTCAGAAATTTTTGAACCAAGAAT
TCGAGGTAGAAAAGGAGAGTATATTGAAGCATCAGCGGGAGAAGAGGGAA
CAGGCGGCGAAGCAAGCGGGTTTGCAACGGAAGCGCATGATGCTGGAGAA
GCAATTAAGAGAAGAAATCTCAGAGATCGAGAAAGATGATCGGATTGAGT
TTTGGCTGACCCTGGTAAAACAAAATTCGACACCTCTATCAGCTAGGATT
GAAGTTAATTCAATCACAGCTCGGGCGCTCGCAAAGGCCATGTGGACAAA
CACTTCACTTACCAGCCTGGACCTGTCGTGCAGCGGCATCGACGATCAGG
CCGGCGCATATATAGCACGTCTCCTCAAACGTAACACCGCTTTGGGGACT
CTTTCGCTAGGCTCGAACCAACTCGGTACCTCTGCATGCCGAGCTTTTGG
AGACTCTTTGTGCTCAAACACCACGCTGAGGTCGTTGAGTCTCGAGTCAA
ATCGCTTGACTCAACATGGTGCGGACTCGTCAGGTGTTCAAGCCCTTGCA
GACATGTTGGGGAAGAACAACACGCTGATCTCAATCAATCTTTGGAGGTG
CGCCCTTGGGGCTGAGGCGGGTACAGCTTTGACCCGTGGCATAGAGTCAA
ACCATACTATTACTTTTCTCGAGGTGGGCCACAACGGTCTGGCGGTGGCA
GACCAGTGTCAGATCAAGGCTGCCCTAGACGCAAATATCCAAAGGTTTGA
ACAACTACAAGAGGTACGCCGCCACGAGCAGGGCATCGCGGACATGATTT
TAGCCAGGGAGAATGCCCTCAAGCATCAGCTGCGCGCTGAACGTGAGCTA
CGCGAATGGCTGGAGCAACAGAAGCAGCTGCGTGCCGAGGAGCGGCGAAA
AACAGAGGAAAATAGGTCAGCTATGACGTGA
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