mRNA_A-nodosum_M_contig885.3.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig885.3.1
Unique NamemRNA_A-nodosum_M_contig885.3.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 5.010e-72
Identity = 137/237 (57.81%), Postives = 170/237 (71.73%), Query Frame = -2
Query:   13 DGQLEATRRL*TGQHLQRLKEGEDHRGRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPGHDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTHGSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDANAAHTPGYGPELSAEQPEDKLL 723
            DG+ +A  RL  G H Q  + G+D+ GRSYA VCRIGSIR   AI C +   ++Q DVV AFL +L D+ V+V  APG   ++S TGE MVYKL+RSLYGL+QSP LW DT D  L V G + TQSDPC+Y + SG  +VILT+YVDDILIT  D  LV+QKKK+L +RFEMTDMGEV RILG+    DY++GTLAI+   YV+  LERFGMQ+AN   T GYG E+S  QP+D++L
Sbjct:   36 DGRFKA--RLVVGGHRQ--EPGQDY-GRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQIL 267          
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 1.630e-71
Identity = 137/237 (57.81%), Postives = 173/237 (73.00%), Query Frame = -2
Query:   13 DGQLEATRRL*TGQHLQRLKEGEDHRGRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPGHDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTHGSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDANAAHTPGYGPELSAEQPEDKLL 723
            DG+ +A  RL  G H Q  + G+D+ GRSYA VCRIGSIR   AI C +   ++Q DVV AFL +L D++V+V  APG   ++S TGE MVYKL+RSLYGL+QS  LW DT D  L V+G + TQSDPC+Y + SG  +VILT+YVDDILIT  D  LV+QKKK+L +RFEMTDMGEV RILG+    DY++GTLAI+   YV+ +LERFGMQ+AN   TPGYG E+S  QP+D++L
Sbjct:  244 DGRFKA--RLVVGGHRQ--EPGQDY-GRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQIL 475          
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5KTY2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY2_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 1.900e-71
Identity = 136/237 (57.38%), Postives = 171/237 (72.15%), Query Frame = -2
Query:   13 DGQLEATRRL*TGQHLQRLKEGEDHRGRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPGHDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTHGSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDANAAHTPGYGPELSAEQPEDKLL 723
            DG+ +A  RL  G H Q  + G+D+ GRSYA VCRIGSIR   AI C +   ++Q DVV AFL +L D++V+V  APG   ++S TGE MVYKL+RSLYGL+QSP LW DT D  L V G + TQSDPC+Y + SG ++VILT+YVDDILIT  D  LV+QKKK+L +RFEMTDMGEV RILG+    DY++ TLAI+   YV+ +LERFGMQ+AN   T GYG E+S  QP+D+ L
Sbjct:  244 DGRFKA--RLVVGGHRQ--EPGQDY-GRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNSIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVPRDYEQRTLAISQEHYVNALLERFGMQEANPVSTSGYGAEISTNQPQDQFL 475          
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 2.600e-71
Identity = 138/237 (58.23%), Postives = 173/237 (73.00%), Query Frame = -2
Query:   13 DGQLEATRRL*TGQHLQRLKEGEDHRGRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPGHDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTHGSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDANAAHTPGYGPELSAEQPEDKLL 723
            DG+ +A  RL  G H Q  + G+D+ GRSYA VCRIGSIR   AI C +   ++Q DVV AFL +L D++V+V  APG   ++S TGE MVYKL+RSLYGL+QSP LW DT D  L V G + TQSDPC+Y + SG  +VILT+YVDDILIT  D  LV+QKKK+L +RFEMTDMGEV RILG+    DY++GTLAI+   YV+ +LERFGMQ+AN   TPGYG E+S  QP+D++L
Sbjct:  400 DGRFKA--RLVVGGHRQ--EPGQDY-GRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQIL 631          
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5KG29_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG29_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 4.850e-70
Identity = 132/239 (55.23%), Postives = 165/239 (69.04%), Query Frame = -2
Query:   13 RL*TGQHLQRLKEGEDHRGRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPG----------HDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTHGSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDANAAHTPGYGPELSAEQPEDKLL 699
            RL  G H Q  + G+D+ G SYA VCRIGSIR   A  C +   ++Q DVV AFL +L D++V+V  APG             ++S TGE MVYKL+RSLYGL+QSP L  DT D  L V G + TQSDPC+Y + SG  +VILT+YVDDILIT  D  LV+QKKK+L +RFEMTDMGEV RILG+    DY++GTLAI+   YV+ +LERFGMQ+AN   TPGYG E+S  QP+D++L
Sbjct:   42 RLVVGGHRQ--EPGQDY-GHSYAPVCRIGSIRMTCATGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTXXXXXXXXXXSAKNSATGEPMVYKLERSLYGLSQSPALLNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQIL 277          
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5K7T8_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T8_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 6.230e-69
Identity = 134/237 (56.54%), Postives = 171/237 (72.15%), Query Frame = -2
Query:   13 DGQLEATRRL*TGQHLQRLKEGEDHRGRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPGHDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTHGSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDANAAHTPGYGPELSAEQPEDKLL 723
            DG+ +A  RL  G H Q  + G+D+ GRSYA VCRIGSIR   AI C +   ++Q DVV AFL +L D++V+V  APG   ++  TGE M+Y+L+RSLYGL+Q P LW DT D  L V G + TQSDPC+Y + SG  +VILT+YVDDILIT  D  LV+QKKK+L +RFEMTDMGEV RILG+    DY++GTLAI+   YV+ +LERFGMQ+AN   TPGYG E+S  QP+D++L
Sbjct:  443 DGRFKA--RLVVGGHRQ--EPGQDY-GRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNYATGEPMMYELERSLYGLSQYPALWKDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQIL 674          
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 7.990e-69
Identity = 127/190 (66.84%), Postives = 148/190 (77.89%), Query Frame = -2
Query:   76 GRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPGHDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTHGSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDAN 645
            GR YARVCRIGS+R   AIACE G  VWQ DV VAFLQ  IDK+V+V+ APG D +D  TG +MVYKL+RSLYGLAQSPVLWYDT D VLVVIG RPTQSDPC+Y HGSG TLVILTLYV+DILI+ KDP LV   KK+L++RFE+TD+GEV  ILGM  T  Y+ GTL ++   YV +ILE  GM++ N
Sbjct:  459 GRRYARVCRIGSVRIFFAIACERGWPVWQMDVAVAFLQPTIDKDVWVKPAPGQDAKDPATGGIMVYKLERSLYGLAQSPVLWYDTIDEVLVVIGFRPTQSDPCVYIHGSGDTLVILTLYVNDILISGKDPDLVADLKKELQDRFEITDIGEVRLILGMKVTRSYENGTLVVSQKGYVKSILESLGMENCN 648          
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 3.710e-67
Identity = 132/237 (55.70%), Postives = 168/237 (70.89%), Query Frame = -2
Query:   13 DGQLEATRRL*TGQHLQRLKEGEDHRGRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPGHDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTHGSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDANAAHTPGYGPELSAEQPEDKLL 723
            DG+ +A   L  G H Q  + G+D+ G SYA VCRIGSIR    I C +   ++Q DVVVAFL +L D++V+V  APG   ++S TGE MVYKL+RSLYGL+QSP LW DT +  L V G + TQ DPC+Y + SG  +VILT+YVDDILIT  D  LV+QKK+ L +RFEMTDMGEV RILG+    DY++GTLAI+   YV+ +LERFGMQ+AN   T GYG E+S  QP+D++L
Sbjct:  137 DGRFKA--HLVVGGHRQ--EPGQDY-GSSYAPVCRIGSIRMTCTIGCHNNWPIYQLDVVVAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLNESLKVFGWKRTQYDPCVYMYTSGNIIVILTVYVDDILITGGDQQLVDQKKE-LTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQDQIL 367          
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 4.120e-67
Identity = 132/228 (57.89%), Postives = 165/228 (72.37%), Query Frame = -2
Query:   40 DGQLEATRRL*TGQHLQRLKEGEDHRGRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPGHDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTHGSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDANAAHTPGYGPELS 723
            DG+ +A  RL  G H Q  + G+D+ GRSYA VCRIGSIR   AI C +   ++Q DVV AFL +L D++V+V  APG   ++S TGE MVYKL+RSLYGL+QSP LW DT D  +   G + TQSDPC+Y + SG  +VILT+YVDDILIT  D  LV+QKKK+L +RFEMTDMGEV RILG+    DY++GTLAI+   YV+ +LERFGMQ+AN   TPGYG E+S
Sbjct:  625 DGRFKA--RLVVGGHRQ--EPGQDY-GRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESITAFGWKRTQSDPCVYAYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEIS 847          
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Match: A0A6H5KS50_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS50_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 7.380e-66
Identity = 135/238 (56.72%), Postives = 166/238 (69.75%), Query Frame = -2
Query:   13 DGQLEATRRL*TGQHLQRLKEGEDHRGRSYARVCRIGSIRTPLAIACEHGCLVWQTDVVVAFLQSLIDKNVFVESAPGHDPRDSKTGEVMVYKLQRSLYGLAQSPVLWYDTTDGVLVVIGSRPTQSDPCMYTH-GSGVTLVILTLYVDDILITRKDPTLVEQKKKKLKERFEMTDMGEVSRILGMGFTGDYDEGTLAIAHTAYVDNILERFGMQDANAAHTPGYGPELSAEQPEDKLL 723
            DG+ +A  RL  G H Q    G+D+ GRSYA VCRIGSIR   AI C +   ++Q DVV AFL +L D++V+V  APG   ++S TGE MVYKL+RSLYGL+QSP LW DT D  L V G + TQSDPC+Y    SG T+VILT+ VDDILIT  D  LV+Q KK+L  RFEMTDMGEV RILG+    DY++GTLAI+    V+ +LERFGMQ+AN   T GYG E+S  QP+D+ L
Sbjct:  343 DGRFKA--RLVVGGHRQ--APGQDY-GRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVCLTSGNTIVILTVCVDDILITGGDQQLVDQPKKELTNRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHNVNTLLERFGMQEANPVSTSGYGAEISTNQPQDQFL 575          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig885.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQD0_9PHAE5.010e-7257.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE1.630e-7157.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KTY2_9PHAE1.900e-7157.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE2.600e-7158.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KG29_9PHAE4.850e-7055.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K7T8_9PHAE6.230e-6956.54Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K9R3_9PHAE7.990e-6966.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JDU8_9PHAE3.710e-6755.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1R7_9PHAE4.120e-6757.89Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KS50_9PHAE7.380e-6656.72Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig885contigA-nodosum_M_contig885:59405..62058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2563
Hectar predicted targeting categoryother localisation
Exons2
Cds size246
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870298.045578-UTR-A-nodosum_M_contig885:59404..601271680870298.045578-UTR-A-nodosum_M_contig885:59404..60127Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig885 59405..60127 -
1680870298.0815027-UTR-A-nodosum_M_contig885:60373..613221680870298.0815027-UTR-A-nodosum_M_contig885:60373..61322Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig885 60374..61322 -
1680870298.099339-UTR-A-nodosum_M_contig885:61413..620581680870298.099339-UTR-A-nodosum_M_contig885:61413..62058Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig885 61414..62058 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870298.0669453-CDS-A-nodosum_M_contig885:60127..603731680870298.0669453-CDS-A-nodosum_M_contig885:60127..60373Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig885 60128..60373 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig885.3.1prot_A-nodosum_M_contig885.3.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig885 60128..60373 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig885.3.1

>prot_A-nodosum_M_contig885.3.1 ID=prot_A-nodosum_M_contig885.3.1|Name=mRNA_A-nodosum_M_contig885.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=82bp
MMSSEHIPWSRGFCLSGMIMPPMVRCGLPISSANLTPFFRSAVGTKMLRP
RSGTISARRLAGSWAPWLSRMVNEIMPVPTP*
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mRNA from alignment at A-nodosum_M_contig885:59405..62058-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig885.3.1 ID=mRNA_A-nodosum_M_contig885.3.1|Name=mRNA_A-nodosum_M_contig885.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2654bp|location=Sequence derived from alignment at A-nodosum_M_contig885:59405..62058- (Ascophyllum nodosum dioecious)
TGCATCCGCTTCGAGCAGCTTGTCCTCCGGCTGCTCTGCTGATAGCTCTG GCCCGTACCCTGGAGTGTGCGCGGCGTTCGCGTCCTGCATTCCGAATCGT TCCAGAATGTTGTCGACATAAGCCGTATGTGCGATGGCGAGTGTTCCCTC ATCGTAGTCGCCCGTAAAACCCATTCCGAGAATGCGGCTTACTTCTCCCA TGTCCGTCATCTCGAATCTTTCCTTGAGTTTCTTCTTCTTCTGCTCCACT AGGGTCGGGTCCTTCCTGGTGATTAGAATGTCGTCGACATAGAGCGTCAG GATGACGAGGGTGACTCCACTGCCGTGCGTGTACATGCAAGGGTCCGATT GTGTGGGCCTGGACCCGATCACCACCAGTACTCCGTCGGTAGTGTCGTAC CAGAGCACGGGTGACTGCGCTAGTCCGTAGAGGCTGCGCTGAAGCTTGTA GACCATGACTTCCCCAGTCTTAGAGTCCCTTGGATCATGTCCCGGTGCTG ACTCCACGAAGACGTTCTTGTCTATAAGGGACTGCAGAAATGCCACCACC ACATCCGTCTGCCACACAAGGCATCCGTGCTCGCATGCTATGGCAAGTGG GGTCCGTATGCTTCCGATGCGGCACACTCGTGCATAGCTCCTCCCGTAGT CGATCCCAGGTTCTTGGACGTGGCCTTGAACGACGAGTCTGGCCTTGAAT CGCCCGTCTGCCTTCTGCTTGAAGACGAAGCGTGAGCCGATGATCTTCTC CCTCTTTGAGACGCTGGAGATGTTGACCAGTTTATAGACGTCGTGTTGCT TCAAGCTGTCCATCTCCTTCTGAATGGCGCCTTGCCAACCCTTCCATTGG GGCGATTTCACCGCGTCCTTGTAGCTGTTGGGGATTTTGAGGGGCTGATT TCCTTCCTCCGAGATTCCTTTGTGACCGGGAGCTCCGGTGGCGTAGACGA AAGCTCTCGAAGAGGCAAAGGAATCTCCATCCAGGTGAGCAAAATCCGCA GTCTCTGTCTCTATCACGAAGCCTGACGCTTTTGCGGCGATCTCCATTAG TTGGCTGAAGGTGAGAGCACTTGGGTCCGGTTGCATAGTGTGGGCGAGAA GCAGAGCTCTTGGGACTTCAGAGCTGTCTACGGTGTCTTCGTCGTTGGGG CTGTTTCTCGTACAGGCTTGAGTGACCTGGAGACACCGCCCGGTTCGTGA TACTGTTGGGACATTTCCTGCTGCTGGCGTAGTTGGTGCGGTCGGAGATG CACCGGGGGATGCATCCTCAGGTTCTCCCGTTGTGCCTGGCACGATGCTT GGTGACGCGACCCCAGAGTTGTTCGATGCGACCGCAGGAGAGGCAGAGAG GGGTTGAGGTGATGTGGGAAGCTCGCGGTAAGTGGCGTTCATCCTGCTGA GTCTCCGTACCTCCTGTCGCAGGCGTTGCATCCCTGCCTCTTGCTCCATG GCTGGGTAGAAGTCTTCTCCGTCGAAGATATCCTCCGTCATTAAAGGTCC ATCTAGTGCTGACGTGAATCGAAGGACGTCTCCCTCGTAGTGGTAGTCTT CTGACGTAACGCTCAGGGGCAGGCTGTATGCCGGCGTCTCCAAAAAGGTC ACGTTGCGGCTTTCCACGACCGTGCTCTTGGCTGGGTTATAGATCCTGTA GGCCAGGCAGCTCATCCTGAGGGTTACGCTGGAACATGATGTCGAGCGAG CACATCCCTTGGTCTCGAGGGTTCTGTTTGAGCGGAATGATAATGCCTCC AATGGTCAGATGCGGGTTACCGATCTCCAGTGCAAATCTGACTCCGTTCT TCCGCTCGGCGGTTGGGACGAAGATGTTGCGTCCGAGGTCTGGTACAATC AGCGCGCGGAGGTTGGCCGGCAGTTGGGCGCCGTGGCTGTCGCGGATGGT GAACGAGATTATGCCGGTGCCGACTCCATAGATTGTGTGTTTCCCGGCGG TTGTGATTTATCTCGACGTTGAAAGCTCCTTGAACTCCTGCATCCTTTCC TTCAGCCCTGGGATCAGTTCGTCGTCGAGGAATGATTCCGACACACCACT GTCGACCAGTAGCCTTGCGCCCTTGGTGCTGGGGTTGAATCGTATCGTGG CTGCTGCTGTGAACATGAAGCCGCCGCCGAAGTCGTTGTTGCTGCCGGCG AAGTTGATGACGGGCTTCTCGCTGTCTGGTGATTCGTTGTTCTTGGCGGC GGCTGTTGTGTCGGCGGTGGACTTGTTGTTCCCGAAGAGCAGTGCGCGCA GCTCGCGCACGCAAGAGAGACGCTCGCCTTCTTGTTCGGCCGTGTTGCTC CTTGACTGTAGCATTCTTCCTCGCTGTGCGAGGTAATCCGGTGGACCGAG CACCACTTCGCTTTCATCCTCGTACTTCTGGACACAGAGGGCTGCAGGTA GCTCAACGAGAAGGTACAGCATGGCGTAGAGATCTTCATTGGCCCTGTTG TAGTCCGCAACCTTGGCAGTATCGGTCGGTTTCTCTTCTCCTTTCAGCAG AGGTAAGATATCCCTGCGGGTGACGCCGATGACGACACAAAACTTCTTCA TCCAGGCCTTGAAGTCAGCTGGGTTGCTTCCGTCGAAATTCTTGAGCCCG CGTAGTATGGTGTTGGCCAGGTTGGTCCCGGTGTCGCCTGTATCGATCAT GTTG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig885:59405..62058-

>mRNA_A-nodosum_M_contig885.3.1 ID=mRNA_A-nodosum_M_contig885.3.1|Name=mRNA_A-nodosum_M_contig885.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=246bp|location=Sequence derived from alignment at A-nodosum_M_contig885:59405..62058- (Ascophyllum nodosum dioecious)
ATGATGTCGAGCGAGCACATCCCTTGGTCTCGAGGGTTCTGTTTGAGCGG
AATGATAATGCCTCCAATGGTCAGATGCGGGTTACCGATCTCCAGTGCAA
ATCTGACTCCGTTCTTCCGCTCGGCGGTTGGGACGAAGATGTTGCGTCCG
AGGTCTGGTACAATCAGCGCGCGGAGGTTGGCCGGCAGTTGGGCGCCGTG
GCTGTCGCGGATGGTGAACGAGATTATGCCGGTGCCGACTCCATAG
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