mRNA_A-nodosum_M_contig883.18.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig883.18.1
Unique NamemRNA_A-nodosum_M_contig883.18.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: D8LS75_ECTSI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS75_ECTSI)

HSP 1 Score: 689 bits (1777), Expect = 1.860e-243
Identity = 349/463 (75.38%), Postives = 389/463 (84.02%), Query Frame = 1 
Query:   76 ASMDGSRDLVNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRPQDNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEALEEYGTFMDEHGVPEKDRRVKIQKKLARMRRNRIKPPPRQVRDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKVTNNPDPRGAIPLARVPDRAKSRKKKRY 1464
            A M+     VNDGDTILVDHSDGR+FF+KVESGK+  IGK +  M +LL APYGAVFELDG  LVRVDGELVEAEEEPPG VEEVTAA LA+  RPQDNRGFTDTNTAQK+TE DI KMKN+GKGGRAIIQALMDNSDTWG K QYSQAKWLKRKQQKYRPRVR+VRVTGR+MCDAYF KNREKVSNLRSD+LAL+L+HANVF+GCQALVLDTCMGVVTAAMLERMGC+GRI +LYAQSQPS+DAVRKFDH E +L++CLLPLHTSELG+LS+PE ERE DP++DGG GD+RTEEEAL EY T MD+HGVPEKDR  +I++KLARMRRN+ +P PRQVRDWLRQGCDC+VIA K+DP+ AV+AMLPHLTPSRPFA+YSEF+E                             VLPGRTHPLNNMSSCGGYVLTGIK+TNN DPRG IP AR+PD AK  KKKRY
Sbjct:   20 AKMERIEGQVNDGDTILVDHSDGRTFFVKVESGKRVNIGKTSCKMSYLLNAPYGAVFELDGNRLVRVDGELVEAEEEPPGVVEEVTAAALASDVRPQDNRGFTDTNTAQKLTEEDIHKMKNEGKGGRAIIQALMDNSDTWGNKTQYSQAKWLKRKQQKYRPRVRVVRVTGRTMCDAYFAKNREKVSNLRSDALALVLTHANVFAGCQALVLDTCMGVVTAAMLERMGCQGRIFALYAQSQPSMDAVRKFDHAEKNLLKCLLPLHTSELGRLSIPESEREADPVDDGGPGDSRTEEEALAEYRTVMDDHGVPEKDRPARIERKLARMRRNKHRPAPRQVRDWLRQGCDCLVIACKFDPIAAVDAMLPHLTPSRPFAIYSEFIE-----------------------------VLPGRTHPLNNMSSCGGYVLTGIKITNNRDPRGVIPKARIPDMAKRHKKKRY 453
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: A0A7S2DYA4_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DYA4_9STRA)

HSP 1 Score: 326 bits (835), Expect = 4.300e-101
Identity = 192/460 (41.74%), Postives = 275/460 (59.78%), Query Frame = 1 
Query:  100 LVNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRV--DGELVEAEEEPPGAVEEVTAATLAAGTRPQ-DNRGFTDTNTAQKMTEGDILKMKNDGK-GGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEALEEYGTFMDEHGVP---EKDRRVKIQKKLARMRRNRIKPPPRQVRDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKVTNNPDPRGAIPLARVPDRAKSRKKK 1458
            LV +G+ +++  +D R +F++ + G     GK N  +  L+G PYG++FEL    + R+     L +A+E          +A L+ G     DNR   DTNT+QK+T  +I  MK D K  G+ IIQAL+ NSDTW  K Q+SQ KWL RKQQK+ PRVRLV     S+CD Y+ KNRE+VSNLRSDSLA +L++ NVF+G   LV DT MG+V ++++ER+G  GR+++ YA  Q + DAV+  +         L+P HTSEL K+         + ++D         ++ +EE   F+ E       E +R   ++++  R++R   +P P  VR+WLRQ CD ++IA ++ PLT +  +LP L  S PF ++ EF+EPLV   R ++K   A KLQL +TW RE+QVLPGRTHP  NMSSCGGY+LTGIKV  N + +      +  +R   R +K
Sbjct:   20 LVKEGEHVILLGADDRRYFVEAKRGTNQRFGKLNCSVIPLIGQPYGSIFELTKKGMSRLFDTDSLTQADE---------GSALLSPGAADSCDNRSLVDTNTSQKLTHEEIEAMKLDPKVSGKEIIQALVHNSDTWESKTQFSQQKWLARKQQKHTPRVRLVLCEAESVCDTYYQKNRERVSNLRSDSLAQILAYGNVFAGGNVLVFDTVMGLVVSSVVERLGGHGRLLAAYAGKQAAFDAVKHMNFTSRQS-SVLVPFHTSELAKVRGDAAMAAFEDVDDSPEAVAARAKKLIEERPAFVTEKLASLTEESERAAYLKRRADRIKRQTARPSPGTVRNWLRQQCDSLIIATEFHPLTVLLELLPVLAFSAPFVIFCEFLEPLVQAFREVRKRNLACKLQLSNTWTREYQVLPGRTHPSMNMSSCGGYILTGIKVHRNDNWKFIDKSEKAAERTLKRDQK 469
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: A0A5D6XMH0_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMH0_9STRA)

HSP 1 Score: 302 bits (773), Expect = 5.240e-92
Identity = 186/470 (39.57%), Postives = 264/470 (56.17%), Query Frame = 1 
Query:   73 GASMDGSRDLVNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRP-QDNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEA--LEEYGTFMDEHGVPEKDRRVKIQKKLARMRRNRIKPPPRQV-RDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKVTNNPDPRGAIPLARVP----DRAKSRKKK 1458
            GA +  + +++ +GDT++   SDGR FF +++  +   +GKK   ++ ++GA YGA+FE     LVRV G          G   +  A     G  P  DNR + DTNTAQK++   I  M+  G  G+ IIQ L++NS+TWG K ++S+ K+LK+KQQKY PRV+ ++ T  S+C  Y LKN  K  NLR DSL  +L +ANVF+G Q LV+DTCMG+V  A+ ER    GRI++ Y   QPSVD +R+F+  +      +      ++  L+V E +    PL     G    E EA  +     F         D+R + + K AR + N++K  P  V R+W+R   D +V+A  YDP   + A+LP+L  S+PF VYSE++EPL      L      + LQL +TW RE QVLPGRTHP   MS+C GY+LTGIK+   P    A+  +  P    D A+ R KK
Sbjct:   11 GAVVARAPNVIYEGDTVICQTSDGRMFFQEMKKDQTIRVGKKLTPLRPVIGARYGAIFEEQNKKLVRVQG----------GLFPDPVAPETGEGFVPASDNRTYADTNTAQKLSTSAIANMRESGATGKEIIQRLVENSETWGAKTEFSKQKYLKKKQQKYMPRVQFLKCTAESLCRTYRLKNPLKTCNLREDSLGQMLVYANVFAGAQVLVVDTCMGLVIGAIAERQAGHGRILAGYEGQQPSVDILRRFNFDKRTH-ESIKYFSFKDVANLAVLETDVVEPPLAPPRDGLTPAEREAAMVARLAGFT-------ADQRKRYEAKKARNQVNKVKREPAAVVREWVRAKSDALVVASSYDPERVLLALLPYLACSKPFVVYSEYLEPLTRAFSTLHAISAVIDLQLSETWTREQQVLPGRTHPEMTMSACSGYLLTGIKIHELPPSLTALKHSLEPADDADDAQPRAKK 462
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: A0A3M6VJP5_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJP5_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.720e-90
Identity = 178/433 (41.11%), Postives = 245/433 (56.58%), Query Frame = 1 
Query:  100 LVNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRPQDNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRC-LLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEALEEYGTFMDEHGVPEKDRRVKIQKKLARMRRNRIKPPPRQVRDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKVTNNP 1395
            ++ +GDT++   SDGR FF  V   +   +GKK   +K ++G+ YGA+FE     LV+V G L      P     E     +  G    DNR + DTN+AQ + + DI +++  G  G+ IIQ L++NS TW  K ++S+ K+LK+KQQKY PRVR +R T  S+C  Y LKN  K+ NLR DSL  +L + N+F+G Q LV+DTCMG+V  A+ ER G  GRII  +   QP+ D +R+F+  +  L     +P     L +L   E    P    DG   + R E  A E    F      PE+ +R   +KK  R      +  P  VR W+R+  D +VIA  +DP   + A+LP+L  S+PF VYSEF+EPL      LQK    + LQL +TW RE QVLPGRTHP  NMS+C GY+L GIK+ + P
Sbjct:   19 VIYEGDTVICQTSDGRMFFQAVTKNESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKVTGGLF-----PDPVAPETGEDFVPDG----DNRHYADTNSAQTLKQADIGELRESGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVAGAVAERQGGSGRIICPFDGQQPAADILRRFNFDKRTLESIHYVPFKQVRLLELKEEEVVESPKIARDGLTLEER-ERLAAERAKNF-----TPEQQKRY-AEKKARREETKIFRQKPSTVRQWIREKSDSLVIAANFDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFARLQKMEAIIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLWGIKILDIP 435
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: A0A225VLQ1_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLQ1_9STRA)

HSP 1 Score: 296 bits (757), Expect = 1.140e-89
Identity = 178/443 (40.18%), Postives = 254/443 (57.34%), Query Frame = 1 
Query:  100 LVNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRPQDNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEALEEYGTFMDEHGVPEKDRRVKIQKKLARMRRNRIKPPPRQVRDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKVTNNPDPRGAIPLARV 1428
            ++ +GDT++   SDGR FF  V   +   +GKK   +K ++G+ YGA+FE     LV+V G L      P     E   + +  G    DNR + DTN+AQ + + DI +++  G  G+ IIQ L++NS TW  K ++S+ K+LK+KQQKY PRVR +R T  S+C  Y LKN  K+ NLR DSL  +L + N+F+G + LV+DTCMG+V  ++ ER G  G II  Y   QP+ D +R+F+  +    + L  +H     ++ + E E E D +E   V  +    E  E       ++  PE+ RR   +KK  R +    +  P  +R W R+  D +VIA  YDP   + A+LP L  S+PF +YSEF+EPL      LQK    + LQL +TW RE QVLPGRTHP  NMS+C GY+L+GIK+ + P P GA  +A V
Sbjct:   18 VIYEGDTVICQTSDGRMFFQAVTKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKVTGGLF-----PDPVAPETGESFVPDG----DNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGRVLVVDTCMGLVAGSIAERQGGSGCIICPYEGQQPAADILRRFNFDK----KTLESIHYMPFKQVRMLEMEEE-DVVEAPKVARDGLTPEERELLAAERAKNFTPEQQRRY-AEKKARREQTKIYRQKPSTIRQWAREKSDSLVIAATYDPEEILMALLPFLGRSKPFVIYSEFLEPLTRTFATLQKMEAIIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKILDIP-PLGASSIAFV 444
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: A0A836CEQ6_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ6_9STRA)

HSP 1 Score: 295 bits (754), Expect = 3.030e-88
Identity = 194/509 (38.11%), Postives = 264/509 (51.87%), Query Frame = 1 
Query:  112 GDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRPQDNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRCLLPLHTSELGKLSVPEEER----------------------------EPDPLEDGG------------------------------VGDNRTEEEALEEYGTFMDEHGVPEKDRRVKIQKKLARMRRNRIKPPPRQVRDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWL---------------REFQVLPGRTHP-LNNMSSCGGYVLTGIKVTNNPDPRGAIP 1416
            GDT ++  SD R  F+ V  GK A +G+    +  L+GAPYG VFE+D + LV V+G L    ++  G VE         G    DNR   D+ TAQ +T  DI +MK  G  GR IIQ+L++NS+T+  K ++SQAKWL RK +KYRPRVRL RVT   +C  Y  +N  K + LR D LALLLSHANV  G  ALV DT MGVV AA+LER+G  G +++ Y +   + DA+++F+  E    R L+   TSE G+L  PE E                             +P+  + GG                              V D    + AL  +   +   G P ++   +  K+  R+ R +++  PRQ RD LR   DC++IA K DPL++++A+LPHL PS  F VY EF EP+V C +  Q T   + +Q+CDTW                R  QVLPGRTHP +   SSC G+ ++GIKV    DPR + P
Sbjct:   25 GDTAILQSSDDRRIFVDVGPGKIARVGRGPVALDPLVGAPYGTVFEVDRSTLVPVEGGLTPYADD--GPVE---------GDMVADNRNLVDSQTAQSLTHQDIERMKAAGTSGREIIQSLVNNSETFESKTEFSQAKWLARKARKYRPRVRLERVTAHGLCTIYTERNALKCAGLRGDVLALLLSHANVSYGKSALVFDTLMGVVAAAVLERVGEAGWVLAPYHREAFNADAMKRFNFSEHLRFRTLVQFPTSEFGRLDEPEAEEPAAAALSKXXXXXXXXXXXXXXXXXXXXDPNSADKGGSAHGASNGGITGADALALLDEGKSLGVPGGVIDPEGLDLALAAFRELLAAQGHPPEEIEKRAVKRRLRLERWQLRLTPRQTRDRLRHKADCLIIAAKCDPLSSLQALLPHLAPSGAFVVYCEFQEPMVECFKWAQTTEALINVQMCDTWYPAAVAVLTASRRPVCRVVQVLPGRTHPEMTLSSSCSGFFMSGIKVVPREDPRPSPP 522
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: A0A2D4BY31_PYTIN (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY31_PYTIN)

HSP 1 Score: 292 bits (747), Expect = 6.970e-88
Identity = 172/429 (40.09%), Postives = 246/429 (57.34%), Query Frame = 1 
Query:  103 VNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRPQDNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEALEEYGTFMDEHGVPEKDRRVKIQKKLARMRRNRIKPPPRQVRDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKVTN 1389
            + +GDT++ + SDGR FF +V++     +GKK   +K ++GA YG++FE     LV V G L       P  V   T       T   DNR +TDTN+AQK++  DI  M+  G  GR IIQ L++NS+TW  K ++S+ K+LK+KQQKY PRVR ++ T  S+C  Y  KN  K+ N+R DSL  +L +AN+ +  Q LV+DTCMG+VT A+ ER    GRII+ Y   Q + D +R+F+  ++ +      +HT  L  +   E + E  P  +  V D  +EEE L      + E+   E+++     KK  R      + P   VR+W+R   D +VIA  YDP   + A+LP+L  SRPF VY E++EPL      LQ+    + +QL +TW RE Q+LPGRTHP   M++  GY+LTG KV N
Sbjct:   35 IYEGDTVICETSDGRIFFQEVKANCTIRVGKKLTPLKPVIGAXYGSIFEEQNKKLVAVSGGLF------PDPVAPETGEFEVPDT---DNRNYTDTNSAQKLSVHDITGMRESGASGREIIQKLVENSETWDAKTEFSKQKYLKKKQQKYMPRVRFLKCTADSLCRTYRAKNPSKICNIREDSLGQILMYANIHAEAQVLVVDTCMGLVTGAIAERQAGLGRIIAGYEGQQLAADILRRFNFDKSTMES----IHTFPLNSVQYLEMKEEDIPESEQVVKDRLSEEEKLRLEAERVAEYTEEEQEKYYI--KKARRAAEKMQRQPATTVREWIRNQSDSLVIASHYDPEPVLLALLPYLKCSRPFVVYXEYMEPLTRLFGKLQQMDSVIDVQLSETWTREHQILPGRTHPEMKMNAFSGYLLTGTKVVN 448
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: A0A0W8CAK1_PHYNI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CAK1_PHYNI)

HSP 1 Score: 289 bits (739), Expect = 4.750e-87
Identity = 173/433 (39.95%), Postives = 245/433 (56.58%), Query Frame = 1 
Query:  100 LVNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRPQ-DNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEALEEYGTFMDEHGVPEKDRRVKIQKKLARMRRNRIKPPPRQVRDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKVTNNP 1395
            ++ +GDT++   SDGR FF  V   +   +GKK   +K ++G+ YGA+FE     LV+V G          G   +  A     G  P  DNR + DTN+AQ + + DI +++  G  G+ IIQ L++NS TW  K ++S+ K+LK+KQQKY PRVR +R T  S+C  Y LKN  K+ NLR DSL  +L + N+F+G Q LV+DTCMG+VT A+ ER G  GRII  Y   QP+ D +R+F+  +    R L  +H     ++ + E E E D +E   V  +    E  E+      ++  P    R   +KK  R +    +  P  +R+W R+  D +VIA  YDP   + A+LP+L  S+PF VYSEF+E          K    + LQL +TW RE QVLPGRTHP  NMS+C GY+L+GIK+ + P
Sbjct:   25 VIYEGDTVICQTSDGRMFFQAVAKDESIRVGKKVANLKPVIGSFYGAIFEEQNKKLVKVTG----------GLFPDPVAPETGDGFVPDGDNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDK----RTLESIHYMPFKQVRLLEMEEE-DVVEPAKVARDGLTPEEREQLAAERAKNFTPXXXXRY-AEKKARREQTKLFRQKPSTIREWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLE----------KMEAIIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKILDIP 431
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: A0A067C628_SAPPC (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C628_SAPPC)

HSP 1 Score: 285 bits (729), Expect = 8.670e-86
Identity = 172/455 (37.80%), Postives = 256/455 (56.26%), Query Frame = 1 
Query:   97 DLVNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRPQDNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEALEEYGTFMDEHGVPEKDRRVKIQKKLARM--RRNRIKPPPRQVRDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKVTNNPDPRGAIPLARVPDRAKSRKK 1455
            +++ DGDT++   SD R FF +V       IGK    +K  +G PYG +FE     LV V G L      P     EV    +       DNR +TDTN +QK++   I +++  G  G  +I  L++NSDTW  K ++S+ K+LK+KQQKY PR+++VR T  S+ + Y  +   K+ NLR+D+L  LL + NV++G Q LV+DTCMG+ T A+ ERM   GRI++ +   Q + D +R+F+  E  +   ++P   + +G L+  E +  P P     +     E EA +           PE+  +  + KK AR+  R+ + +  P +VR  LR   D ++IA  YDPL+ ++A+LP L  S+PF VYSE++EPL +    LQ+    V LQL DTW RE+QVLPGRTHP   MS+  GY+L+GIKV ++P P     L  +P R   + +
Sbjct:    3 EVIRDGDTVVCYTSDDRVFFQEVSPKMTLRIGKATVTLKSAIGHPYGTIFEESEKALVPVTGGLF-----PDPVAPEVGDFQVPTN----DNRHYTDTNDSQKLSNVQIAELRASGVNGPELIAKLVENSDTWDTKTEFSKQKYLKKKQQKYMPRIQMVRCTAMSLAEVYHARQPFKILNLRADTLGQLLQYGNVYAGAQVLVVDTCMGLATGAIAERMLGHGRILAGFEGQQMAADTLRRFNF-EPAVHDSIVPFPLAYVGLLTKDEADLAPPPKSQAEMDSTNEEIEARQREVAERVALYSPEEQAKY-LAKKEARIKARQTKTRRTPAEVRALLRSPSDSLIIASHYDPLSMLQALLPLLGLSKPFVVYSEYLEPLTTAFDALQRMDSIVNLQLNDTWTREYQVLPGRTHPEMTMSAGSGYILSGIKVESSPPPASHATLKSIPRRTNKKPR 446
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BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Match: A0A0P1AWZ4_PLAHL (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWZ4_PLAHL)

HSP 1 Score: 284 bits (727), Expect = 3.500e-85
Identity = 167/429 (38.93%), Postives = 241/429 (56.18%), Query Frame = 1 
Query:  100 LVNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKHLLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRP-QDNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYSQAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLLSHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVRKFDHPETDLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEALEEYGTFMDEHGVPEKDRRVKIQKKLARMRRNRIKPPPRQVRDWLRQGCDCVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRAVKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKV 1383
            ++ +GDT++   SDGR FF  +   +   +GKK   +K ++G+ YGA+FE     LV+V G          G   +  A     G  P +DNR F DTN+AQ + + DI ++++ G  G+ IIQ L++NS TW  K  +S+ K+LK+KQQKY PRVR +R T  S+C  Y LKN  K+ N+R DSL  +L +AN+F+G Q LV+DTCMG+V  A+ ER    G II  Y   QP+ D +R+F+  +    + L  +H     ++ + E   E D +E   V  +   +E                       +KK  R +    +  P  +R+W+RQ  D +VIA  YDP   + A+LP+L  S+PF +YSEF+EPL      LQK    + LQL +TW RE QVLPGRTHP  +MS+C GY+L+GIK+
Sbjct:   22 IIYEGDTVICQTSDGRMFFQAITKNESIRVGKKVASLKPVVGSFYGAIFEEQNKKLVKVTG----------GLFPDPVAPETGEGLNPDEDNRHFADTNSAQMLKQTDIGELRDKGASGKEIIQKLVENSSTWETKTDFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPMKICNMREDSLGQILVYANIFAGGQVLVVDTCMGLVAGAIAERQRGTGCIICPYEGQQPAADILRRFNFDK----QTLESIHYMPFNQVRMLEMNEE-DVVEIKQVARDGLSQEXXXXXXXXXXXXXXXXXXXXX-AEKKALREQTKLFRQKPSTIREWVRQKSDSLVIAANYDPEKVLMALLPYLGRSKPFVIYSEFLEPLTRTFATLQKLEAIIDLQLNETWTRENQVLPGRTHPEMSMSACSGYLLSGIKI 434
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig883.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS75_ECTSI1.860e-24375.38tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A7S2DYA4_9STRA4.300e-10141.74tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A5D6XMH0_9STRA5.240e-9239.57tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A3M6VJP5_9STRA1.720e-9041.11tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A225VLQ1_9STRA1.140e-8940.18tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A836CEQ6_9STRA3.030e-8838.11tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A2D4BY31_PYTIN6.970e-8840.09tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A0W8CAK1_PHYNI4.750e-8739.95tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A067C628_SAPPC8.670e-8637.80tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A0P1AWZ4_PLAHL3.500e-8538.93tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig883contigA-nodosum_M_contig883:98370..107219 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LS75
Preferred nameTRMT6
PFAMsGcd10p
Model size1962
Max annot lvl2759|Eukaryota
KEGG rclassRC00017,RC02950
KEGG koko:K03256,ko:K08730
KEGG ReactionR07376
KEGG Pathwayko00564,ko01100,ko01110,map00564,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0001510,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0007154,GO:0007267,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0023052,GO:0030154,GO:0030488,GO:0031515,GO:0031974,GO:0031981,GO:0032259,GO:0032502,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045165,GO:0045168,GO:0046331,GO:0046483,GO:0048869,GO:0070013,GO:0071704,GO:0080009,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990234
Exons12
Evalue2.75e-245
EggNOG OGsKOG1416@1|root,KOG1416@2759|Eukaryota
Ec32 ortholog descriptionEukaryotic initiation factor 3, gamma subunit
Ec32 orthologEc-12_004570.1
EC2.7.8.29
DescriptiontRNA methylation
Cds size1407
COG categoryS
BRITEko00000,ko00001,ko01000,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870293.7145514-UTR-A-nodosum_M_contig883:98369..988581680870293.7145514-UTR-A-nodosum_M_contig883:98369..98858Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig883 98370..98858 -
1680870293.8681853-UTR-A-nodosum_M_contig883:107153..1072191680870293.8681853-UTR-A-nodosum_M_contig883:107153..107219Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig883 107154..107219 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870293.7311127-CDS-A-nodosum_M_contig883:98858..990231680870293.7311127-CDS-A-nodosum_M_contig883:98858..99023Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 98859..99023 -
1680870293.744323-CDS-A-nodosum_M_contig883:99403..994901680870293.744323-CDS-A-nodosum_M_contig883:99403..99490Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 99404..99490 -
1680870293.7552428-CDS-A-nodosum_M_contig883:99973..1001081680870293.7552428-CDS-A-nodosum_M_contig883:99973..100108Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 99974..100108 -
1680870293.7667298-CDS-A-nodosum_M_contig883:100462..1005341680870293.7667298-CDS-A-nodosum_M_contig883:100462..100534Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 100463..100534 -
1680870293.781256-CDS-A-nodosum_M_contig883:101035..1012391680870293.781256-CDS-A-nodosum_M_contig883:101035..101239Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 101036..101239 -
1680870293.7925801-CDS-A-nodosum_M_contig883:101677..1017911680870293.7925801-CDS-A-nodosum_M_contig883:101677..101791Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 101678..101791 -
1680870293.8015423-CDS-A-nodosum_M_contig883:102187..1022511680870293.8015423-CDS-A-nodosum_M_contig883:102187..102251Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 102188..102251 -
1680870293.8109515-CDS-A-nodosum_M_contig883:103392..1034761680870293.8109515-CDS-A-nodosum_M_contig883:103392..103476Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 103393..103476 -
1680870293.821381-CDS-A-nodosum_M_contig883:103795..1038751680870293.821381-CDS-A-nodosum_M_contig883:103795..103875Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 103796..103875 -
1680870293.8337703-CDS-A-nodosum_M_contig883:104470..1046251680870293.8337703-CDS-A-nodosum_M_contig883:104470..104625Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 104471..104625 -
1680870293.8457057-CDS-A-nodosum_M_contig883:105166..1053031680870293.8457057-CDS-A-nodosum_M_contig883:105166..105303Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 105167..105303 -
1680870293.856946-CDS-A-nodosum_M_contig883:107043..1071531680870293.856946-CDS-A-nodosum_M_contig883:107043..107153Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig883 107044..107153 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig883.18.1prot_A-nodosum_M_contig883.18.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig883 98859..107153 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig883.18.1

>prot_A-nodosum_M_contig883.18.1 ID=prot_A-nodosum_M_contig883.18.1|Name=mRNA_A-nodosum_M_contig883.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=469bp
MLGASMDGSRDLVNDGDTILVDHSDGRSFFMKVESGKQAMIGKKNYGMKH
LLGAPYGAVFELDGTDLVRVDGELVEAEEEPPGAVEEVTAATLAAGTRPQ
DNRGFTDTNTAQKMTEGDILKMKNDGKGGRAIIQALMDNSDTWGVKNQYS
QAKWLKRKQQKYRPRVRLVRVTGRSMCDAYFLKNREKVSNLRSDSLALLL
SHANVFSGCQALVLDTCMGVVTAAMLERMGCKGRIISLYAQSQPSVDAVR
KFDHPETDLVRCLLPLHTSELGKLSVPEEEREPDPLEDGGVGDNRTEEEA
LEEYGTFMDEHGVPEKDRRVKIQKKLARMRRNRIKPPPRQVRDWLRQGCD
CVVIAGKYDPLTAVEAMLPHLTPSRPFAVYSEFVEPLVSCLRHLQKTGRA
VKLQLCDTWLREFQVLPGRTHPLNNMSSCGGYVLTGIKVTNNPDPRGAIP
LARVPDRAKSRKKKRYWK*
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mRNA from alignment at A-nodosum_M_contig883:98370..107219-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig883.18.1 ID=mRNA_A-nodosum_M_contig883.18.1|Name=mRNA_A-nodosum_M_contig883.18.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8850bp|location=Sequence derived from alignment at A-nodosum_M_contig883:98370..107219- (Ascophyllum nodosum dioecious)
CTCTGCTGTGTCGAGGCCAAGCAGTCCTGCCGTGCATAGATATTTTAGCG
AGTATTTTGCTGTTTAATGCTCGGGGCTTCAATGGATGGATCAAGGGACC
TCGTCAATGACGGAGATACTATCCTTGTCGACCACAGCGATGGACGATCG
TTTTTCATGAAAGTCGAGTCGGGCAAGTGAGTTTATGCCCTTTCAATATT
TCAGCCAGCCCGCCGCTTATCAGCTTAACGCGACAAAGATTTTCATAACA
GACCCAGATATATGTGGGAGGTGTGAGATTCACGGCCGGAATGTTTTACG
TGCGACAAGCTGCCGTCGATGTTGCATTATGGCCCTATTCTGTTCCGCGT
GAGCCTCCTCTTGTAAGCAAAAATGCGGCGCTTCGTTTGCACTTATTGCT
GTCAACAGTCCCGTAGCACACGATGCGACCCACGATGCGCCACTAACTGA
GTGCAGACGTACGATACTACAGCTCTAAAGCTAACACCAACAGTACAAAT
ACAAACAGAAGACCACAGCATTGCAGTAGTTCGTATGTCGGACGCCACCC
CTCGCCTCGATATTATTTTCACTCAGTTGTTAGTTGATTTGGGTTCATTC
TACCTCAGCGCTGTTCTTGGGGGGTACAACTGTAGTATGGAGCACTCTTA
CCCGTACGTTTTATTTTTCCTTTTGTCAATGGAATCTTGTTTAAGAAAAA
TCTGAACGCATCTAAACCTTCTGAGCATCCACCTCAAGTGGAAGAGTGTC
TAAAGGTTTAGGTGGGAACATTGGCTGTAGAGACAAAACCTCTTCATGGT
ATCAAAAGGTTCCCCAATGTAATTACATCGGGTCGACAGTATAATATCGG
GGAGAAGCCCTCCGTTATACTGTACACTTACATTAATCTCTATGCAGGGA
CACCAAAACCACATCCTTTTAATCTAAGAGTTCTGGACTACAGTGTAGTA
ATATGGTCTTACATGATCTTAGAGAAATTAAAGTAAAATTAAATTAATAT
TACTATACAGGTGAGGTTCTTTGTTATTGATATAAATTGATGGGAGGCGA
CATAGGGGAAATTAAATTAGGGTCAGAGAGGGAACTATACAAGTACATTA
ATCATTATGTAGTAGTAAAAAGAGGCAAAGAAGAACAGTAAGATTATATT
AGTACAGGTGAACATTATATTTGCACTTCCGGATTACAGTAGTGGGGTCA
CAGAGAGACACCAAAATTTATTTTACGGGAGACTTATAAACCTCACCCTG
TTGTCCAAGAGTTGAATCTGCTATACCAGGTATAGTACAGTATATTCTGT
AACGGTCGCGCTCGAGTGAGGGGTAACCGCCAAGCGAAAGCCGAGGGCCT
GAGGCAGGAATTGAGGAAATCTCGAATCCCTGCAAACACAAGCATTCCGT
GGCGTGTCATGCGGTCACGGCAATTGGGCGATGGAACCATTATGCTTTGG
CAGCAATGACCGGTATTACCATCTCCGTCGTTTTATCAACCGACGTACAA
CGACCTAAGAGCGGCAACGCGGGGAGAATGTCGACGACGTTGGCAGCGCG
CAAAACTATTCTGGGAGGATCTTCTGCGAGAGAACACCAGACGCTCGGTG
GGAACCACAGATGACGCGATGTTCTATCGATGGAAAATCATCGTCGCAGC
TGCCTCCGCCACCGTCACGGGTCGCTATGATCGCGTATCCAGTCATATCA
TAAACAACATCATGTAGTTTTATGCCCCCCCTCCCCCCCCCCCCCAAAGC
TTCATCCGAGTCTCACATTTTGGAGACCGCAGGATCGATCTCGCTATCGA
TAGGGCGCTCCTTCGGTAGGACCTGGGATCGAAGCGTCTTCCTCCCTTGT
CTAGGGTGGTGAAATGTTACCTAATATTTTCCATTTATCTCCTCTCTTAC
GTCCTTTCCTTTTCAGGCAGGCCATGATCGGCAAGAAGAACTACGGCATG
AAGCATCTCCTGGGCGCCCCTTATGGCGCCGTGTTCGAGCTCGACGGCAC
CGACCTGGTCCGCGTCGACGGGGAACTTGTCGAGGCCGAGGAGGAACCAC
CTGGTGAGATTAAGCGAGGTATATGCTCTGTCTACAATAGAGAGGGACAA
TCGAGGAGGGAAACTGACTGAACATAGTGTTTAGCAGCCATTTCGCGGCA
AGGAGCAGAGAACACCAGAGCCGCTTAGCACTTTGTGGCGTACGGAAGGC
GCGTGTCACTCCACCTTTGGCAGAGAAACACTAGTTATCGTACTCTGTCG
CCGTATTCGTTTGCCTGTGTGTATGTATGTGTGTTTGTGTTAGTGGTGGT
AGGGGAGGGTGAGGAGTAGCTTACGGGCGGGAGAGCGACGGCGACGGCAA
CGAGATGCCCGTCACTGGTTAGACGAAGATATAGGCCCCTTGCCCCCGAG
AAAGAAAGACCTCCAACATTTTAATCCACGGCGGTGATCCACCTTGTTCG
CACCAACGACATTTCCGGAACCTGTTTTCCGAGCCCGTCGTACCTTCGTT
CTGCGGAGCGTGCTGCGATATTGATGACGCAGGCTGAGGCCCATGGTTAC
ATCACTCTCGTCCGGTTGTCCGGTGCGTTCCCAAAAATAAAAAGGGGCGG
TGGAGGAAGTAACCGCGGCGACCCTCGCTGCCGGCACGCGCCCTCAAGAC
AACCGTGGCTTCACGGACACCAACACGGCCCAGAAGATGACGGAGGGAGA
CATCTTGAAGATGAAGAACGACGGGAAGGGTGGCCGAGCGATCATACAGG
TCGGTCGTTCGGTCGTTCGGTCAATCGGTCGGTCAATCGGTCGGTCAATC
GGTCGGTGTATTCTTCTTTGTAGCGTGCAAGTTTTAAGTTTGTTAACAAG
TTGCACATGCATGTATGTATGATCATCACATATAGCAGAGTGTGGATCAA
CCGGGTAAGGTTGCCAATCCGGCTTGTGCTCAGCTAAACAGGAAAAATGT
TTTTTTCCCCCTGTCCCCGTTCGCGCCTTAAAATTTGGCCTCGCGAGAGG
GGTTCGGCCGTCCCGTCCCGCGTCAGCCTGCTTATTCTCCACACTCAGGC
TGAATCTGGTGCTTACTCGCGGGATTCCTAGTCCTCGTTCGTAGGTTTTT
GGATAGGTTTTCGCTTGCTCTATTTTGTGGGTAAGAGTTGAAAAACAAGC
GTGTTTTCTGCTCTACTTGCAAGCGTTTCGACGCATAGTTACGTTCAGTA
GTCGTACGGTGTACGATGAGGCGTTCCGTTTTTTTTTGTTTTTTCGCCTA
CGGGAGAGAAAGGAGCGTGTGAACAAAATTCTCGAGTCCGACTTGGACGC
TCGCTGTTGCGTTGCCTCGGGGGTCTCTATCTCGAAAAAGACAGGCGTTG
ATGGACAACAGCGATACGTGGGGCGTCAAGAACCAGTACAGCCAGGCGAA
ATGGCTCAAGCGAAAGCAGCAGAAGTGAGAAAGAAGCGTGCCGCCTTCCA
GTCCTCTCTTTCCCAAGCTAGAGAAGAGCAACACGTGTTGTGAAGCGTAT
GGAAGGGTTGCTGAATTGGCGCCTGAACCGTTTGACCTTACGGTTTGTGT
ACGCATGTTTCCGGTGTTAGCAATCAGTCGGCAGCTACCGGGCGGTCGAT
GCTTTCCGTTTCACGCTCTCACGACGCTTTCTCCCCCTCTGTTGTATCTT
GCCCGCCTGCCTGCCCCCCTCCCCCTGGCCTTTGTCCGAACACAACGGTG
CAACACGATGTTACCTTGTCGAATGTCCCTACTTTTGCGCAAGGTACCGA
CCGCGCGTTCGCTTGGTTCGAGTCACCGGCCGCTCCATGTGCGACGCGTA
CTTCCTTAAGAACAGAGAAAAAGTCAGGTACGAGTAGAGTAACGCAAACC
GTACGATACCCTAGAGACAGTGGTCGTTAGTCCGGTCCAATCAATACCAG
TGAACATATCTGTATGAAATAAGGGACTTGACTTGTTGGCGTCTTTGATT
GGTGTAAATATAAGGGAGATATGGTGTTATAGTCGTAGGTATAGAAGAGG
AGGCTGCCGGAAGGAACTACGAGCGTTAGCTGAATAGCAACAGCAGCTAC
AACAGCTGTTCTATACAAGTACTGTAGCAATTTGAACGTGTGCGCTAGAG
GTGTAGGCAGGGCGTCCGCTGAGAGGTAGAAGTTACACATACTGTAATAC
GTTGTACAGGCTACGATTCGATTATCTCGTGCGATACCTACAGACAGAGA
TTAATTTAGGTGTTAGTAGACAGGATTGAGAAGGTACTTCCTTTCTTTTC
CCCAAAAGGCCGCGTGGAGAACCTTGAGAAGTGACCGCTGTCCTTCGACA
CACATATAGTAAGAGTATGGATCAACCGGGTAAGGTTACCAATCCTGCTC
GTGGTCAGCTGAGCAGGGAAAATCAATATTTCCCTGTCCTCGGTCGCGCC
TGAGAATTTAATCTCGCGAGACGGGTTCGGCAGTCCCGTCCCGCGTCAGC
CTGCTCATCTCCATACTCAAGCTGAATCTGGTGCTTACTTACGGGATTCC
TCCCGAGTTCCGCGGCGGCATCCATTTATTTTTTTAAACCGCCATACGCC
ATCGGGCCAGTCCCTAGTTTATCGGGTCACGCAATTGCGTACCGATGGCG
TTCACTGCCGAGAGTCCACCGGCACAGGGTCAGTAAACTTCAAGGTAGTT
CCGAGCGAGTGCTGCCTTGGCAGGTCACCATGGACCAATTAGTACGCGCC
TCCCTTTCCCACACCCACTATTGGTATGAAGTGGGCATGTTGAAAGTACC
TATTTACCGTTGTCGCCCGTTTACCTCAGAGGCCCCTGGAGCTAGGGCTG
TAGCCCCGCATTCAACACAGCTCAGCCCCAGTACATAACTAGCACGCAAT
CCGTGGTCGTGGCCGCGTTCGGGTTTCCACCTTTCTTCGGTTTGGTCCTA
GCGCCTAAGCTGTCACTGCTGCACCTCTTCACTGCTGCACCTCTCCAAAC
TCTTTCGGATGCCGGTAGCAACCTCCGGAGCGACTCGCTCGCCCTCTTGC
TCTCCCATGCCAACGTCTTCTCCGGCTGTCAGGTGGGGGTAAAGGGGTAG
CTTGGATCTTCCCGACACGTAGCCACAAAGCGTCTACTAGTGTACTTCTT
TTTGTTTTAGGCCCACAACGGTGTGCTAGTTCATTTCCCCTAAAATCGTT
TCCCCAGGTAGACGCCTCGAGGCCGAGTTTCCGTAATGCGCGCATTGTGT
GTGGTGCCGTGGGGATGTCCGCCTGCCCCTTCCCCTTCCCACGTGTACTT
TCGGATGTGTCATGTTACCTTCGACGCGAATCTCAGGCGTTTTCCTGGAA
AAAAGGGGAGATCAATACCCCCCCCCCTCCCCCCCTCTCCTCTAGCGATA
GCTACACTACTACACTACTACATTTCTAATCTGAATTGCTTTCATTTTAC
ATTGGATGATCATATTGCATTTTGATAGGCGCTGGTGCTGGACACCTGCA
TGGGCGTGGTGACGGCGGCGATGCTTGAGCGCATGGGGTGCAAGGGAAGA
ATAATTTCTCTGTACGCGCAGAGCCAGCCCAGCGTGGATGCTGTGAGTCG
CCCGTCGAGCAGCAGTTGCAGGAAATATAGCCCCGACGAAAGAAATGACG
TCATCATCGAACCCCCAACCGGAAGGGAAAAAAAGACAGAAACGTACGGA
TTCATTTGTGGCTGTGTCATTGGTTCGCCAGTGAAACAAATCGAGGCGAT
GCGCGTATCGAGAGAGCATGTGAAAAATTCCACTTGCACCCCTCTGCTGG
CGATAGTCTTACCATGCATTTTTTTATCACAAATCGTGGGGTCCGTGCGA
GAGGTCGTGCTTTCCGAACGCCGATTCCTCGTGGCATCGAGCCTCCGCCG
TGCCGAGGAAAATTCGCAGAACAGAGTATGAATAAACTTACTACTAATTG
ACACACATACACTTCGCACCCCAGGAGCCGCTGAAGTGGTGAGTGCCCCG
TCCCCTCGGCTTTCGCCCTGCCGCGGACAGGTTCGGAAGTTCGACCACCC
GGAGACCGATCTGGTCCGCTGCCTTCTACCGCTGCACACGAGCGAGCTCG
GGAAGCTATCCGTTCCGGAGGAAGAGCGCGAACCCGACCCGCTCGAGGAC
GGGGGAGTGGGGGACAATCGGACGGAGGAGGAAGCACTGGAAGAGTACGG
GACGTTCATGGACGAGCACGGCGTGCCCGAGAAGGTGAGGCGCTGAGCTG
CGCTACGACGCGCGCCGCTTCTCGGGACCCGTGCGCAACCAGAGCTTTTG
TCGCACTGGTGTGGGAAACAAAGATTGCTAGGTCTGCATTGGCAAGTGGG
TAATGTCGGTGGAGGACCGACGCGAGCAAGAGCATTGCCGCCGCTTGTAT
GGTGATGAAACGGTGCCCGCGCGTGCGCCTAAGTACGGTGCGCAGGGCGA
TTGTGCCGATGCGATGGGAGATAGTGCTTCGGTTGAAAGGACAAGATATT
ATACTTGTAGATTGGCACGGGAGCACGGTGGAGGGACGAAAGGCAGAAGC
GTGTAAGTATATGAAATTACAGTAACAGCAGTCGTTGCTAAGGTGGCACA
TCTGGTATCTAGCCCTGGTGGCTAAGCTGACATCCCCTGGTGCAGAATGC
CTTTCTTTTGGTGCGAGCTTTGTAGCGGTGTCGTATCTTTATTGTTGCCG
TCATCGTCGTCGGTAACGTGACAACGCACGACCAGGACCGGCGTGTGAAG
ATTCAAAAGAAGCTGGCCAGGATGCGACGGAATAGGATTAAGCCCCCCCC
TCGGCAGGTGCGCGTCGCTCGCGCGCTTCCAGGGGACGTTCTGCTTCGCT
CGTTCGCGTTCGGTAAAACCTCCGGAGCGTTCTCGCGTTTTTCGCCACGA
GGGTGCAATCGAGGGAGGAATTCGGCGTCTGAAATATTGTCGGTGTGTTT
TTTCTTCCAGTTCCCGGCAAGTAAGGGTTCCTCTACGAACACTGCGGGCC
GTATTTCCCAGTCAAGCAATCACGCAGGTTGGGTCTGTTGGCCTGCTTGC
TCTCAACGTTTGTCCTGCGCGCCGTGCCTCGATTCTGCCGCGATGGATGG
CTACGCTCTCCTCCCGCTCTCCCCACCCTTGGCGTTCCCTGTGGTTTTCG
GCGTGTTTCAGGTTCGGGACTGGCTGCGGCAGGGGTGCGACTGCGTTGTC
ATCGCCGGCAAGTACGACCCTCTCACGGCCGTTGAGGCCATGCTGCCGCA
TCTCACCCCTTCCAGGCCTTTCGCAGTGTACTCGGAGTTCGTAGAGGTAC
GAGGGCGTGACCACCAACCCCGGGCGACTGAAAGTTGAGGGAGACGAGAG
AGGTCTCTTAGGGTACTGTCCACTGTACCATCTTGATCGTTGCCCGCTGT
AGCTTTCTCGATCTCTGCTTGTGGACCATTGGGAGCAATGTGCACCGTGC
GACGCGAATCACCCCGGTGTGCAGTGTACGGTGTAGGCGGGATGGTCTCA
GTGTCGGTGGCGCTGAGATGGGGAAGGCCATCGAGCCTTCCATCCGCTGA
CCTTCTCAAAAAAAAAATGAGGAAGCTTGTACCGTAAAGAGGGCAGAAAC
AAACCAATTTAAGAGGCGATACTGCTTGGGCCGCATAGGATAGAAGGGTT
CGCCCCGGGAGTTTTATGTCATCTGCGTCGTCGAGTAGTCACCACTTGCC
CCCCCTGCCCTTTCTTCCCACTCCGCCGTTTCCCCCGTCATTTTGGTGTG
GATTTTGGGCACATGCATCCTCGGCGCAGCCCTTGGTTTCGTGCCTTCGG
CATTTGCAGAAGACGGGGAGGGCCGTCAAGCTACAGCTCTGCGATACCTG
GTTGAGGGAGTTCCAGGTTCGACCTTGCTGCCATGAAGAGGGATTTGTAA
CTTTAGTACTGTATACAATATGGTACAGGTGGTGGTTCTATGGTTGCCAG
AGTATACCTACCTTATCTTCCCCCCTGGACTCACAATGCGTTAAATTTCG
TCGAATTCTATGTTGTTGCTTGGCCATATATTGCGTTTAACTTCGTTGAA
TTTTGCTTGTTGTAGATAAACATGCGGGGTCGCCGTCGTCTGTAGCCTGT
ATACGTAGCATTATCGGGTTCGAGCTCTTCTGAGAAGGCTTCGTGAAAAC
CGATTAGAAAAGAACGTAATATGCTGCGTGTTAGGTGTTGGTTATATCCC
TTGACGAAACCCTCAAATGGATGGGACGATAACGATTACCCCGCAGGTGT
TGCCCGGGCGAACGCATCCTCTGAACAACATGTCCAGCTGCGGGGGTTAC
GTCCTGACGGGCATCAAGGTCACCAACAATCCGGACCCGCGGGGCGCCAT
CCCGCTAGCGCGTGTTCCCGATCGCGCCAAGTCGCGGAAAAAGAAAAGAT
ACTGGAAGTGATCCCCCGTTGTTGACCGCCTTGTATTTTTTCCTGGTGCG
CTTCCACCCGTGCTTTTGCTTGCTAACGGCACATGTACGGTATCTCCGAC
GTGTTCCAAACGATGGTGTCCAGATCTTTCTCAGCCGATAGGATTGTTGT
AGGTGGCTGCGCGTTGTTACGGCCCTCTTAAGATTTAAAAAGGCTTCAAG
AAGCCTCCCCCCCTCCCGTCCTCGCCGCTAAGAGCGAGTGAACGAGTCTT
GAAGGATCCCATTGGTCGCTGTGTACCTACTGAAACTACTGCATACAGCA
GGGTAAGGTGTTCGCTTCGCTCAACACGTACTACGTGGTGTATATAAGAC
TCGTGCGCTATTTGATAGACACCTGACCTCCACCGGCACGGGCGGCGCAA
GTGGTTGTTCGTCAAGCGAGCGGACTTGCTCAGTCCTTGCGCCCACGGCT
GTGAGCTGCCTTCGATGTGCGGTAGCGATTGGTAATGACAATAAATTAAC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig883:98370..107219-

>mRNA_A-nodosum_M_contig883.18.1 ID=mRNA_A-nodosum_M_contig883.18.1|Name=mRNA_A-nodosum_M_contig883.18.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1407bp|location=Sequence derived from alignment at A-nodosum_M_contig883:98370..107219- (Ascophyllum nodosum dioecious)
ATGCTCGGGGCTTCAATGGATGGATCAAGGGACCTCGTCAATGACGGAGA
TACTATCCTTGTCGACCACAGCGATGGACGATCGTTTTTCATGAAAGTCG
AGTCGGGCAAGCAGGCCATGATCGGCAAGAAGAACTACGGCATGAAGCAT
CTCCTGGGCGCCCCTTATGGCGCCGTGTTCGAGCTCGACGGCACCGACCT
GGTCCGCGTCGACGGGGAACTTGTCGAGGCCGAGGAGGAACCACCTGGGG
CGGTGGAGGAAGTAACCGCGGCGACCCTCGCTGCCGGCACGCGCCCTCAA
GACAACCGTGGCTTCACGGACACCAACACGGCCCAGAAGATGACGGAGGG
AGACATCTTGAAGATGAAGAACGACGGGAAGGGTGGCCGAGCGATCATAC
AGGCGTTGATGGACAACAGCGATACGTGGGGCGTCAAGAACCAGTACAGC
CAGGCGAAATGGCTCAAGCGAAAGCAGCAGAAGTACCGACCGCGCGTTCG
CTTGGTTCGAGTCACCGGCCGCTCCATGTGCGACGCGTACTTCCTTAAGA
ACAGAGAAAAAGTCAGCAACCTCCGGAGCGACTCGCTCGCCCTCTTGCTC
TCCCATGCCAACGTCTTCTCCGGCTGTCAGGCGCTGGTGCTGGACACCTG
CATGGGCGTGGTGACGGCGGCGATGCTTGAGCGCATGGGGTGCAAGGGAA
GAATAATTTCTCTGTACGCGCAGAGCCAGCCCAGCGTGGATGCTGTTCGG
AAGTTCGACCACCCGGAGACCGATCTGGTCCGCTGCCTTCTACCGCTGCA
CACGAGCGAGCTCGGGAAGCTATCCGTTCCGGAGGAAGAGCGCGAACCCG
ACCCGCTCGAGGACGGGGGAGTGGGGGACAATCGGACGGAGGAGGAAGCA
CTGGAAGAGTACGGGACGTTCATGGACGAGCACGGCGTGCCCGAGAAGGA
CCGGCGTGTGAAGATTCAAAAGAAGCTGGCCAGGATGCGACGGAATAGGA
TTAAGCCCCCCCCTCGGCAGGTTCGGGACTGGCTGCGGCAGGGGTGCGAC
TGCGTTGTCATCGCCGGCAAGTACGACCCTCTCACGGCCGTTGAGGCCAT
GCTGCCGCATCTCACCCCTTCCAGGCCTTTCGCAGTGTACTCGGAGTTCG
TAGAGCCCTTGGTTTCGTGCCTTCGGCATTTGCAGAAGACGGGGAGGGCC
GTCAAGCTACAGCTCTGCGATACCTGGTTGAGGGAGTTCCAGGTGTTGCC
CGGGCGAACGCATCCTCTGAACAACATGTCCAGCTGCGGGGGTTACGTCC
TGACGGGCATCAAGGTCACCAACAATCCGGACCCGCGGGGCGCCATCCCG
CTAGCGCGTGTTCCCGATCGCGCCAAGTCGCGGAAAAAGAAAAGATACTG
GAAGTGA
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