mRNA_A-nodosum_M_contig88.33.2 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: A0A835YPZ9_9STRA (DMC1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ9_9STRA) HSP 1 Score: 373 bits (958), Expect = 2.270e-119 Identity = 193/329 (58.66%), Postives = 243/329 (73.86%), Query Frame = 1
Query: 52 YDDVDSFQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATVKPVGGHVLAHASTTRVHLKKGRGEERIAKLFDSPSMPEAECSFKITSGGIADTD 1038
Y+ V F +E+L I A+I KLKE +ATVG + P K L IRGFSE VAKI A KVD F++G++ R R+ VIK+ TGS +D +LGGG+ETGSITEF+GEFR+GKTQ+MHTL VT+QL SGG GRVV++DTE NFRPER+E IAERFG+D NE LENI + +HEQQ++ H + L +GPIR++IVDS+I LFR DFSGRG+L+ RQQKL +H++SL +A + N AVV++NQ M+DPGA++MFATVKPVGGHV+AHASTTRV LKKGRGEERIAK+ DSP MPEAE +F+I+ GGI D +
Sbjct: 22 YEVVVRFVEIEQLAKHAINAADIQKLKEQGIATVGMLFQCPLK---TLHDIRGFSETKVAKILETARKVDPRAGI-IFRSGIEARDERRNVIKITTGSAGLDGILGGGVETGSITEFYGEFRTGKTQMMHTLAVTAQLDIQSGGGAGRVVFIDTENNFRPERIENIAERFGIDGNEVLENIFHCQPQSHEQQMDFVHAVGPLATENGPIRLVIVDSIITLFRTDFSGRGELAERQQKLNKHMTSLKNIAREFNAAVVIINQVMADPGAISMFATVKPVGGHVVAHASTTRVMLKKGRGEERIAKICDSPLMPEAEATFRISDGGITDPE 346
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: A0A4D9CQI8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQI8_9STRA) HSP 1 Score: 370 bits (951), Expect = 2.680e-118 Identity = 193/324 (59.57%), Postives = 245/324 (75.62%), Query Frame = 1
Query: 64 DSFQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFA-TVKPVGGHVLAHASTTRVHLKKGRGEERIAKLFDSPSMPEAECSFKITSGGIAD 1032
D+ +V EL G+ A+I KL EA ++T G V P K LLAI+GFSEA V KI+++A K+ G+S F+TG + R R+R IK+ TG+K DA+LGGG+E+GSITE +GEFR+GKTQL HTL VT QL D GG +G+ +Y+DTEGNFRPER+E IA+RFGLD + TL+NIIV R + +QQ E +AAL GP R++I+DS+IALFRVD+SGRG+LS RQQKLG+HLS+L ++A D+N+AV LVNQC +DPGAM++FA VKPVGG+VLAHAS TR+HLKKGR R+AK+ DSPSMPEAE F IT GGIAD
Sbjct: 28 DTMVNVSELQKLGVNAADIAKLVEAGISTAGMVCKVPLKV---LLAIKGFSEAKVEKIRSSARKLT-GGTSHPFRTGTEVREQRKRCIKITTGAKTFDAILGGGVESGSITEAYGEFRTGKTQLSHTLAVTCQLGFDQGGGQGKCIYLDTEGNFRPERIEKIADRFGLDADATLDNIIVARAYASDQQCELLKPLAALIAEHGPFRMLIIDSIIALFRVDYSGRGELSERQQKLGQHLSALTRLAEDMNIAVFLVNQCTADPGAMSLFAPVVKPVGGNVLAHASCTRIHLKKGRENCRVAKVVDSPSMPEAEAQFAITDGGIAD 347
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: B6K203_SCHJY (RecA family ATPase Dmc1 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K203_SCHJY) HSP 1 Score: 343 bits (880), Expect = 6.200e-108 Identity = 182/324 (56.17%), Postives = 237/324 (73.15%), Query Frame = 1
Query: 67 SFQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV--KPVGGHVLAHASTTRVHLKKGRGEERIAKLFDSPSMPEAECSFKITSGGIAD 1032
SF +EELT GI M +I +LK+A + TV V S + LL I+GFSEA V K++ AA+K+ F T ++ +R+RV + TGSK DA+LGGG+++ SITE FGEFR GKTQ+ HTLCVT+QL R+ GGAEG+V ++DTEG FRP+R+ AIAERFG+D ++ +ENIIV+R +N EQQ++ +A + DG R++IVDS++ALFRVDFSGRG+LS RQQKL L+ L ++ + NVAV + NQ +DPGA MFA+ KPVGGHV+AHAS TR+ L+KGRGEER+AKL DSP MPEAECS+ ITSGGIAD
Sbjct: 18 SFSDIEELTAQGIGMTDIIRLKQAGICTVQGVQMSTKRF---LLKIKGFSEAKVDKLKEAASKL----CPANFATAMEISQSRKRVWSISTGSKAFDAMLGGGVQSMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGAEGKVAFIDTEGTFRPDRIRAIAERFGVDADQAMENIIVSRAYNSEQQMDYITKLATIFAEDGRYRLLIVDSIMALFRVDFSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQADPGAALMFASNDRKPVGGHVMAHASATRILLRKGRGEERVAKLNDSPDMPEAECSYVITSGGIAD 334
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: D7FY86_ECTSI (Meiotic recombination protein DMC1/LIM15 homolog, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY86_ECTSI) HSP 1 Score: 337 bits (863), Expect = 1.120e-106 Identity = 180/219 (82.19%), Postives = 197/219 (89.95%), Query Frame = 1
Query: 1 MAAAQASRGANEQ-----QEEVYDDVDSFQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAH 642
MA+AQASR + Q +++ DDVDSFQ VEELTNAGIKMAEINKLKEANLATVG+VLA+PTK LL IRGFS+A+VAKIQ AAAKVD SGSSG F+TGLQCR AR++VIKVHTGSKQ+DALLGGGIETGSITEFFGEFRSGKTQL HTLCVTSQLS++SGGAEGRVVYMDTEGNFRPERVEAIAERFGLDP ETLEN+IVTRVFNHEQQI+RAH
Sbjct: 1 MASAQASRRNSNQXXXXXEDQEVDDVDSFQCVEELTNAGIKMAEINKLKEANLATVGAVLATPTK---RLLTIRGFSDATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAH 216
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: A0A1J4KIK7_9EUKA (Meiotic recombination protein DMC1 like protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KIK7_9EUKA) HSP 1 Score: 336 bits (862), Expect = 2.870e-105 Identity = 175/323 (54.18%), Postives = 232/323 (71.83%), Query Frame = 1
Query: 67 SFQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATVKPVGGHVLAHASTTRVHLKKGRGEERIAKLFDSPSMPEAECSFKITSGGIADT 1035
SF S+E+L AGI A+I KLKEA + TVG+VL K N ++G S+A V KI AAA +D S S F +G +C RQRVI + TGS ++D LLGGGIE+ SITE FGEFR+GKTQL HTLCVTSQL + GG G+VVY+DTEG FRPER+ IA RFG+DPNE L+NI+ R F HEQQ++ A D R++I+DS+ ALFRVDFSGRG+L+ RQQ LG+ +S+L ++AS+ NVA+ + NQ M+ P + KP+GGH+LAHASTTR++L+KG+G ER+AK++DSPS+PEAE +++++ GI D+
Sbjct: 19 SFDSIEKLVQAGINAADIKKLKEAGICTVGAVLMETKKRLAN---VKGISDAKVDKIIAAATSLDTSFS---FMSGNECLNRRQRVIHITTGSSELDKLLGGGIESMSITEVFGEFRTGKTQLCHTLCVTSQLPINQGGGAGKVVYIDTEGTFRPERIPTIAARFGVDPNEVLDNILYARAFTHEQQMQLILQATAQMAED-QYRLMIIDSITALFRVDFSGRGELAERQQTLGQMMSALSKVASEFNVAIFITNQVMASPDSALFVQAPKPIGGHILAHASTTRLYLRKGKGAERVAKIYDSPSLPEAEATYELSDTGIIDS 334
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: DMC1_SCHPO (Meiotic recombination protein dmc1 n=3 Tax=Schizosaccharomyces TaxID=4895 RepID=DMC1_SCHPO) HSP 1 Score: 333 bits (853), Expect = 5.380e-104 Identity = 177/323 (54.80%), Postives = 234/323 (72.45%), Query Frame = 1
Query: 70 FQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV--KPVGGHVLAHASTTRVHLKKGRGEERIAKLFDSPSMPEAECSFKITSGGIAD 1032
F +E+LT GI M +I KLK+A + TV V S + LL I+GFSEA V K++ AA+K+ F T ++ R++V + TGS+ ++ +LGGGI++ SITE FGEFR GKTQ+ HTLCVT+QL RD GGAEG+V ++DTEG FRP+R++AIAERFG+D ++ +ENIIV+R +N EQQ+E + + DG R++IVDS++ALFRVD+SGRG+LS RQQKL L+ L ++ + NVAV + NQ +DPGA MFA+ KPVGGHV+AHAS TR+ L+KGRGEER+AKL DSP MPEAECS+ IT GGIAD
Sbjct: 15 FSDIEDLTAHGIGMTDIIKLKQAGVCTVQGVHMSTKRF---LLKIKGFSEAKVDKLKEAASKM----CPANFSTAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYITKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQADPGAAMMFASNDRKPVGGHVMAHASATRLLLRKGRGEERVAKLNDSPDMPEAECSYVITPGGIAD 330
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: M3JBG1_CANMX (Meiotic recombination protein DLH1 n=1 Tax=Candida maltosa (strain Xu316) TaxID=1245528 RepID=M3JBG1_CANMX) HSP 1 Score: 332 bits (852), Expect = 5.980e-104 Identity = 180/327 (55.05%), Postives = 228/327 (69.72%), Query Frame = 1
Query: 64 DSFQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERIAKLFDSPSMPEAECSFKITSGGIADT 1035
+S QSV+ L GI +INKLK A + ++ +VL++ + NL I+G SE V KI+ AA K+ G F + R V + TGSKQ D +LGGGI++ SITE FGEFR GKTQL HTLCVT+QL +D GG EGRV ++DTEG FRPER+ +IAERFG+DP+ LENI R N E QIE + + L++G R++IVDS++A FRVDFSGRG+L+ RQQKL +HLS+L ++A D NVAV L NQ SDPGA A+FA KPVGGHVLAHAS TR+ L+KGRGEER+AKL DSP+MPE EC + I+ GGI D+
Sbjct: 5 ESIQSVDLLQELGINAGDINKLKSAGIYSISTVLSTTRR---NLTKIKGLSEIKVEKIKEAAGKLKSVG----FISATSVAELRNNVFNITTGSKQFDEVLGGGIQSMSITEVFGEFRCGKTQLCHTLCVTAQLPKDMGGGEGRVAFIDTEGTFRPERIRSIAERFGVDPDTCLENISYARALNSEHQIELVEQLGSE-LSEGTFRLLIVDSIMACFRVDFSGRGELNERQQKLNQHLSNLTRVAEDYNVAVFLTNQVQSDPGASALFAGADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPERECVYVISDGGIKDS 323
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: DLH1_CANAX (Meiotic recombination protein DLH1 n=7 Tax=Candida TaxID=1535326 RepID=DLH1_CANAX) HSP 1 Score: 328 bits (841), Expect = 2.450e-102 Identity = 178/328 (54.27%), Postives = 225/328 (68.60%), Query Frame = 1
Query: 64 DSFQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERIAKLFDSPSMPEAECSFKITSGGIADTD 1038
DS S++ L + GI +INKLK A + ++ SVL++ + NL I+G SE V KI+ AA K+ K G F +R +V + TGSKQ D +LGGGI++ SITE FGEFR GKTQL HTLCV +QL D GG EGRV Y+DTEG FRP+R+ +IAER+G+D + LENI R N E QIE + L +G R++IVDS++A FRVD+SGRG+L+ RQQKL +HLS+L ++A D N+AV L NQ SDPGA A+FA KPVGGHVLAHAS TR+ L+KGRGEER+AKL DSP+MPE EC + I GGI DTD
Sbjct: 5 DSIISIDSLQDQGINAGDINKLKSAGICSITSVLSTTRR---NLTKIKGLSEIKVEKIKEAAGKIKKYG----FLPATIVAESRTKVFHITTGSKQFDEILGGGIQSMSITEVFGEFRCGKTQLCHTLCVAAQLPTDMGGGEGRVAYIDTEGTFRPDRIRSIAERYGVDADICLENISYARALNSEHQIELVEQLGNE-LAEGTFRLLIVDSIMACFRVDYSGRGELNERQQKLNQHLSNLTRVAEDYNIAVFLTNQVQSDPGASALFAAADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPEKECVYVIGEGGIKDTD 324
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: A0A1U7LN42_NEOID (Meiotic recombination protein dmc1 n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LN42_NEOID) HSP 1 Score: 328 bits (841), Expect = 3.530e-102 Identity = 180/329 (54.71%), Postives = 232/329 (70.52%), Query Frame = 1
Query: 55 DDVDSFQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAHGIAALCLTD-GPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFAT--VKPVGGHVLAHASTTRVHLKKGRGEERIAKLFDSPSMPEAECSFKITSGGIAD 1032
DD F +EEL N GI ++I+KL+ A + TV +V + NL I+G SEA V K++ AA+K+ +G F T AR+RVI + TGSKQ DA+LGGGI + SI+E +GEFR GKTQL HTLCVTSQL ++ GG EG+V Y+DTEG FRP+R+ AIAERFG+D + LENI+V R +N E Q++ + ++ + G ++IIVDS++ALFRVD+SGRG+LS RQQKL LS L +M+ + NVAV L NQ SDPGA MFA+ KPVGGHVLAHAS TR+ L+KGRGEER+AKL DSP M E ECS+ I +GGI+D
Sbjct: 12 DDDQLFYEIEELQNQGINASDISKLRAAGICTVTAVQMVTRR---NLGKIKGLSEAKVEKLKEAASKLCPAG----FSTASTISHARRRVISISTGSKQFDAILGGGIMSMSISEVYGEFRCGKTQLCHTLCVTSQLPKEMGGGEGKVAYIDTEGTFRPDRIRAIAERFGVDAEQALENIVVGRAWNSEHQLDLINRLSTTFTEEKGVYKLIIVDSIMALFRVDYSGRGELSERQQKLNVMLSRLSRMSEEFNVAVFLTNQVQSDPGASLMFASNDKKPVGGHVLAHASATRIMLRKGRGEERVAKLLDSPDMAEKECSYCILAGGISD 333
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Match: A0A8J5USH7_9ASCO (AAA domain-containing protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5USH7_9ASCO) HSP 1 Score: 325 bits (833), Expect = 3.590e-101 Identity = 173/328 (52.74%), Postives = 228/328 (69.51%), Query Frame = 1
Query: 64 DSFQSVEELTNAGIKMAEINKLKEANLATVGSVLASPTKAPQNLLAIRGFSEASVAKIQAAAAKVDKSGSSGRFQTGLQCRIARQRVIKVHTGSKQVDALLGGGIETGSITEFFGEFRSGKTQLMHTLCVTSQLSRDSGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPNETLENIIVTRVFNHEQQIERAHGIAALCLTDGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERIAKLFDSPSMPEAECSFKITSGGIADTD 1038
+ QS++ L + GI +INKLK A + ++ SVL++ + N++ I+G SE V KI+ +A+K+ G F + R + + TGSKQ D +LGGGI++ S+TE FGEFR GKTQL HTLCVT+QL R+ GG EGRV Y+DTEG FRPER+++IAERFG+DP L+NI R N E QIE + L+DG R++IVDS++A FRVD+SGRG+L+ RQQKL +HLS L ++A D N+AV L NQ SDPGA ++FA KPVGGHVLAHAS TR+ L+KGRGEER+AKL DSP+MPE EC + I GGI D++
Sbjct: 4 EEVQSIDLLQDFGINAGDINKLKSAGIFSIASVLSTTRR---NMIKIKGLSEVKVDKIKESASKLKTVG----FVSATIVAELRTKTFNLSTGSKQFDEILGGGIQSMSLTEVFGEFRCGKTQLCHTLCVTAQLPREMGGGEGRVAYIDTEGTFRPERIKSIAERFGVDPEACLDNISYARALNSEHQIELVEQLGNQ-LSDGCFRLLIVDSIMACFRVDYSGRGELNERQQKLNQHLSGLTRIAEDYNIAVFLTNQVQSDPGASSLFAAADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPERECVYVIGEGGIKDSE 323 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig88.33.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig88.33.2 >prot_A-nodosum_M_contig88.33.2 ID=prot_A-nodosum_M_contig88.33.2|Name=mRNA_A-nodosum_M_contig88.33.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=347bp MAAAQASRGANEQQEEVYDDVDSFQSVEELTNAGIKMAEINKLKEANLATback to top mRNA from alignment at A-nodosum_M_contig88:281411..286656- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig88.33.2 ID=mRNA_A-nodosum_M_contig88.33.2|Name=mRNA_A-nodosum_M_contig88.33.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5246bp|location=Sequence derived from alignment at A-nodosum_M_contig88:281411..286656- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig88:281411..286656- >mRNA_A-nodosum_M_contig88.33.2 ID=mRNA_A-nodosum_M_contig88.33.2|Name=mRNA_A-nodosum_M_contig88.33.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1041bp|location=Sequence derived from alignment at A-nodosum_M_contig88:281411..286656- (Ascophyllum nodosum dioecious)back to top |