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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 1176 |
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Cds size | 1011 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870271.2026467-UTR-A-nodosum_M_contig874:37799..37963 | 1680870271.2026467-UTR-A-nodosum_M_contig874:37799..37963 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig874 37800..37963 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870271.2157218-CDS-A-nodosum_M_contig874:37963..38775 | 1680870271.2157218-CDS-A-nodosum_M_contig874:37963..38775 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig874 37964..38775 + |
| 1680870271.2270336-CDS-A-nodosum_M_contig874:42193..42392 | 1680870271.2270336-CDS-A-nodosum_M_contig874:42193..42392 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig874 42194..42392 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig874.8.1 >prot_A-nodosum_M_contig874.8.1 ID=prot_A-nodosum_M_contig874.8.1|Name=mRNA_A-nodosum_M_contig874.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=337bp
MRSLHNIAVAVGTLALRHGTLSVGLETGVILEQRSRVFRQLDSHQRPRGV
SGWLAGIDKPALSLVTCGLRSGYRRDPVPDCAAAHESSGGDSPQSSMPKR
TCKTIPAKFSCAPHVTRRSPPSRVCGSQCRGRLPTAHIDTATSTVINIFG
RAGSSDLRSALLFTRGGGGGVSGWFGSDTYDEFPEDFDYDDSEDYDGSSA
GDVDVYWPEMGDELDTNGGEAVPEKGHSRAAASGTAATGSAKELDGARSA
RARWSPTGFSLWGGSRKSRGSSAPALSVSPAAPGLPSSPDSLALRNAPKL
VLDTDFPTEKPGILLGFIALGGALVGLLGVKIREALA back to topmRNA from alignment at A-nodosum_M_contig874:37800..42392+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig874.8.1 ID=mRNA_A-nodosum_M_contig874.8.1|Name=mRNA_A-nodosum_M_contig874.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4593bp|location=Sequence derived from alignment at A-nodosum_M_contig874:37800..42392+ (Ascophyllum nodosum dioecious)
GCCAGAGAAATCACGGGTCATGGAGAAGGAGGGAGTTCGAACCGCATTTG
GGGGATATGGTGGCGGGGTCTCAGGATTCTTCAGTTTGCTCCATTCGGGC
ACAAACTGGAACACTTCTGTACCTCAGCAACCCAGGCTAGTGCGCAGGGC
AAAGTGAAGAAAGTATGCGTAGTCTGCACAATATCGCCGTTGCAGTCGGG
ACGCTTGCCTTAAGACATGGTACACTTTCGGTAGGATTAGAGACAGGTGT
TATCTTGGAGCAGCGGTCGCGTGTGTTTCGCCAGCTCGATTCTCACCAGA
GACCACGAGGCGTCTCGGGATGGTTGGCAGGAATAGATAAACCAGCGCTT
TCTTTGGTGACATGTGGACTAAGGAGTGGATACCGGAGAGATCCAGTGCC
CGACTGCGCAGCAGCGCATGAAAGTAGTGGCGGCGATTCGCCGCAGTCGT
CGATGCCCAAAAGAACATGCAAGACGATACCTGCCAAATTCTCTTGTGCT
CCGCATGTTACCAGAAGATCACCCCCTTCACGAGTCTGTGGAAGCCAGTG
CAGAGGCAGGTTACCCACCGCTCATATTGACACCGCCACCTCCACCGTCA
TTAACATCTTTGGGCGGGCTGGTTCGTCTGATCTCCGGTCGGCGCTGCTG
TTTACCAGAGGCGGAGGCGGTGGAGTATCGGGTTGGTTTGGGTCGGATAC
CTACGACGAGTTCCCGGAAGACTTCGACTACGACGATTCAGAAGATTATG
ATGGCTCGTCCGCGGGCGATGTTGATGTCTACTGGCCGGAGATGGGGGAC
GAGCTGGATACTAATGGCGGTGAAGCGGTCCCAGAGAAAGGCCACTCAAG
GGCAGCGGCTAGTGGGACAGCAGCGACTGGGTCGGCGAAGGAACTAGACG
GCGCACGATCAGCTCGAGCACGCTGGTCACCGACCGGCTTCAGCCTTTGG
GGGGGGTCACGAAAGTCACGCGGCAGGTGAGTACGGCGCGTATCGGTGCT
GCGCGCCAGGTATGGAGAGAAGAAGGAGGTAGAAACGCCCTCATGTTGTT
GACATGCAGATATGGTACACCTTTAGCTCTACGTTGGGTTTTATCGTCAG
TTCAAACGAGTAGGTACGAACTACTGTAGAAAGATTAAGGTGCAAACAAC
AAGTCACTGCTGTCTCAAGTAGACAGAGGTTAGTTAGTTGCTGCTGTATC
CTTGACGATCTATCTGCAACCGAACATGGTTGAATGGGAACATGAAACTC
GCAAGAGATACTTTGACTGTTGACTGTATTGTAGCTGCACTAAAGTGTGG
GCAAGGAAGTTTGTCTTGCGGTGCCCACGACACGTGGCACGTCAACGTCA
ATTTTGCCCTAAAACCAAAAAGAAGTTACCTATTTTTGTGAGGAAAAGCC
CAACAGATTGAACACGGCGATCCTAACGATACCCCACCCGACACCCCCCC
ATGAAATTATAAGCGGCATGGGGCAATCAATCCCTTGACCCAACAAATGG
AAGCTCAAGGAAATCGGAATAGACGGTAGGCAACGACTGGTAAACCAACT
TGGACGAGTCTACATCGGCAGTAGTACCTACCAGTATGTATTTGATGTAG
TATATCTCAAAAATTTTAAAGATGGCGATTAATGTTAAGTGTACAGTATA
ATGTTACTATAATAATACTATCGGGGAACTCGTTTAAATGCCATGAAGAT
GTTTTGTCATTTGCAGCATATGATCCCACCTAGGTATGCGTTTTGACATG
TTCCCCCCTGTGTGGAATGCTATTAACAGAAGGTCTACTTGTAGATGCGT
TCAGATTCTTCTTAAAAAACATTCATATTAATAGTTGAAAATTTCCGATA
GGCGGATCACAGTATCATACCCTTGAACAGGAACTTGTAGGTTATGAGGT
CGGGTAGAACACTATTTGTTGTAATATTAGTAGGCGAGAACAAGGACGAG
TATCGAGGAACAAACAAACTGCGCCTGGTATCAAGGGACAAGAGTTGTTC
TATGATAGAGTAGTATGGATATATTTATGGTCTTACATGTAGCAAGAGTA
TGGATCAACCGGGCAAGGTTGCCAATATTGCTCGTGGTCAGCTGAACAGG
GGAAAATTAATTTTTCCCTGTCCGCGTTCGTGCCTGAGAATTTGGTCTCG
CGAGACGGGTTCGGCCGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATGT
CTGCTGAACGTGATGATCATACACCATAATACATACAGTACATACATACA
TATAGTACGTACATACATACATATATACCCAGGATCAATGCGAGTGGCAT
AGAATGACTAGGATGACAGGGCCGGATTGCGCGGTTATGTGCAATTTAAT
AAATATACATACATACATACATACTAAGTACATGTATACTGTATCACATG
GTGCTTTAGAAACGACGGGGGTAGGCGCCGCAGCCCCAACAAAAACGCTC
CCCTGGTGCAAAATGTATCCTACGTACAATACTTGCAGCCCGTTACATTC
TTATTGTAGAACGGCAGCAGCAACATGGTGCAAAAAATCGGGCAAACCAT
TCGAGCGGACAGATCGCACCGCCCCTCTTCTCCCTACGGATAACGTATCA
CTTGAAATTGGACTCAGAGGCTGTCGTTAAGACGCAGAGCGAGCGATTGC
GTCGAAATCGAATCATCCCACCGAAATTCGTTTTGTTTTTCATGTCTCGA
TTCCCCTCGCGTTTCCAAAACAATGAACTCCTTGCTGTCCGACGTCGTCT
TGCCACACAAAATATAGATAAAAAGCGGGGGGGGGGCGCTTCCGGCAGTA
GTAGTAGTAGTAATAGTACTGATTGTATGTGTACATTTATTATTGTATTG
TACATACCGCGCAATCTAGCCCTACCATGCCAGTTATTCTGTTACTTCCA
TTGGTCCTCCCGATGTATGTATTTAAGTGTGTGCGTGTATTTGTTAAATT
GCACATATCTGCGCAATCTGGCCCTGTCATCAAAGTCATGCTATGCCACT
CGCATTGATCCTCCCAAGGGGGATCAATGTTATTACGAAAACCTCTGATC
AGACGAGACAAAGGGGACACACTCTCTCTACGTGTACAAATCTTACTTAA
GCCCTGAGTACCTTGTGCTCCCCCTGCTTCCTTGTTACTCTCTAGATTAT
CTGGGTTGGCAGCTACTGAACCAACCCTTTATTTGTTACGTTTTTTCCTC
TTCCACTCAAGTCTCCCCCGTTTCCCACATGGCGTTTACAACTATTTTGC
GGTTTCTTGCGCTTCTTCGCCTCTCTTCCGCCCTCCCCGATCCTATCCTC
GTTCCCGTTCCCGTTATTCTCGTCCCCGTTCCCATCTCCGCTACTGTCCT
CGCTTCCGTTCCCGTTCCCGCTCCCGCTCCCGCTCCGTCCCCATGACCGT
TCACGTCCCCGTTCCCACCTTCGAGTCTCCTTTCCCACCCCCGACTCCAA
TCCCGCCCCCGACCCCGTTCGCTCCTTCCTGTCCCTCGGACCCCGTTACG
CCCTCGGTACGATGCGCTTGTACAGATACCGAGCCTTGCACATACACACA
CACACACAGGATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCC
GGATTGCGCGGTTATGTGCAATTTAATAAATCCACACACACACACACACA
CACACACACAGTGAGGTTGGCTCAGACGTGCCTGCCCTCATCAAGGAGCT
CGCCATCAGACGGGTAGAGCACAGGTCGGAGACACACACCAACGAGTCCC
AACATCTGGCGGAAGGGACGGTTGTAGCACGTCTTCGGCGACGATTCTCT
TTTGTTTTACAGCAGGCACTTTCATTGCGCAAGCGCCACCATCTGGACAG
GGGGGGGTGGCGCTTGCGTTGCGCAATGAATGTTCCTTCTGTAAAACAAA
AGAGAATCGCCGCCGAAGACGTGCTACTTCCGTCCTTTCCGCCAGATGTT
GGGACTCATTGGTGTGTGTCTCCGACCTGTGCTCTATCCGTCTGATGGCG
AGCTCCTTGATGAGGGCATGCACGTCTGAGCCAACCTCACTGTGTGTGTG
TGTGCGTTTCGTTGGCTGAACGCCGGTCGCGTCGAGTCGACTACTCAAGC
GCAGTCCACTAAAAATGTCACGCTGCTGTGCGCTGTGTGCCCGGCCTAAC
CCCAAAAGCACACGCACCCTCCCCCCACCCGCCTTATGGAACAACGCCTC
TATTATAGTGGACTATTATTAATGGACTGTTATAGTGGCACAATCCACAC
ATCCCCCGCCCCTCGCACCCACACAGATGCCGGGCGCGCATGCATTCCCA
AGAGCAAGTACCTCCACCCCTTTGACACCTCCTATTAATAGTCATTGTTT
GCTTGCTACTTTTACCGCCCCGCCGTGCGCCTTTGTGTTGGCAGTTCCGC
GCCGGCGTTGAGTGTGAGCCCCGCGGCGCCCGGGCTGCCGTCGTCACCCG
ACTCCTTGGCGCTGAGGAACGCGCCCAAGCTGGTGCTTGATACTGACTTT
CCAACGGAGAAGCCGGGAATACTTTTGGGATTTATTGCCCTCGGCGGCGC
CTTGGTGGGACTTTTGGGGGTCAAGATTAGGGAAGCACTCGCG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig874:37800..42392+ >mRNA_A-nodosum_M_contig874.8.1 ID=mRNA_A-nodosum_M_contig874.8.1|Name=mRNA_A-nodosum_M_contig874.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1011bp|location=Sequence derived from alignment at A-nodosum_M_contig874:37800..42392+ (Ascophyllum nodosum dioecious)
ATGCGTAGTCTGCACAATATCGCCGTTGCAGTCGGGACGCTTGCCTTAAG
ACATGGTACACTTTCGGTAGGATTAGAGACAGGTGTTATCTTGGAGCAGC
GGTCGCGTGTGTTTCGCCAGCTCGATTCTCACCAGAGACCACGAGGCGTC
TCGGGATGGTTGGCAGGAATAGATAAACCAGCGCTTTCTTTGGTGACATG
TGGACTAAGGAGTGGATACCGGAGAGATCCAGTGCCCGACTGCGCAGCAG
CGCATGAAAGTAGTGGCGGCGATTCGCCGCAGTCGTCGATGCCCAAAAGA
ACATGCAAGACGATACCTGCCAAATTCTCTTGTGCTCCGCATGTTACCAG
AAGATCACCCCCTTCACGAGTCTGTGGAAGCCAGTGCAGAGGCAGGTTAC
CCACCGCTCATATTGACACCGCCACCTCCACCGTCATTAACATCTTTGGG
CGGGCTGGTTCGTCTGATCTCCGGTCGGCGCTGCTGTTTACCAGAGGCGG
AGGCGGTGGAGTATCGGGTTGGTTTGGGTCGGATACCTACGACGAGTTCC
CGGAAGACTTCGACTACGACGATTCAGAAGATTATGATGGCTCGTCCGCG
GGCGATGTTGATGTCTACTGGCCGGAGATGGGGGACGAGCTGGATACTAA
TGGCGGTGAAGCGGTCCCAGAGAAAGGCCACTCAAGGGCAGCGGCTAGTG
GGACAGCAGCGACTGGGTCGGCGAAGGAACTAGACGGCGCACGATCAGCT
CGAGCACGCTGGTCACCGACCGGCTTCAGCCTTTGGGGGGGGTCACGAAA
GTCACGCGGCAGTTCCGCGCCGGCGTTGAGTGTGAGCCCCGCGGCGCCCG
GGCTGCCGTCGTCACCCGACTCCTTGGCGCTGAGGAACGCGCCCAAGCTG
GTGCTTGATACTGACTTTCCAACGGAGAAGCCGGGAATACTTTTGGGATT
TATTGCCCTCGGCGGCGCCTTGGTGGGACTTTTGGGGGTCAAGATTAGGG
AAGCACTCGCG back to top
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