mRNA_A-nodosum_M_contig870.2.5 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig870.2.5
Unique NamemRNA_A-nodosum_M_contig870.2.5
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: A0A6H5K794_9PHAE (Glyco_trans_2-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K794_9PHAE)

HSP 1 Score: 727 bits (1876), Expect = 2.660e-235
Identity = 555/1346 (41.23%), Postives = 673/1346 (50.00%), Query Frame = 3
Query:  336 SILDMIAGFMPSG---PPEAPAT----------------AEGSGLSLSTPARTPAVGRTHDEMRRRDVHMICFSKDRAFQLDQLLESSSRHLLLADEDQSSG----------IRVTLHTSVLFIVSPPSAAAXXXXXXXXXXXXXTRATPVKPKVISSQVVNIGGKNSARLCGSVGSNTAGRSGALGEGNVSVSPVGGPVRSMEDSYDMVRRRHPSVTFIREEPGRFCDQLLELV-ESSKDRKQGGEA-------EAFVLFAVDDMFFYRDFGLPGALRLLSSDPSVFCAHLRLHPGITWSHTAGSPCDVPPLS----HIGRKVSSLGRNSDQLRAPASYTRTATK---------------------DPPKT----DSDQGRVMDHGRPMVAADFSLLTFARNEVTGEWNYPWDLTGGLYRREDAMVVLHGVVGAYGKKAAANPNLLEYHGHRLL--------SKIRCQQQSRHSSVHPGSSRSRPPVSGGSATPAVIEAVTNERSCHAAGRESRVQSPMPPAEGK----GAPAATAXXXXAVKVA---------------------SAAPRCACSGRAVVSSLAVNRVQSTYSTPIYNSHGGGVLDLDRRLWSLV-------GATSRC----VDGEHERDES------------GHRQDTTRG---------------TLNERGAMTGRGGFNARAYRRRSFASVHVGQLFFQDNTGEAHADVTQRFETKEARARQRGNRAGVAVESSSIAFARHDCVSSKNARGGGDPRRIDVRPGSTGSQPQPSGYIGSASRPGEINTICSEVLSQPKPSVTVLLPVKNGGARLVDAVQSVLTCAQRTPTNWKIELLIIDDGSEDGAVEEALATVGLNV-PSGEAVGTERGENEEKEHGSKGTV-----------GSGKKFGESATADVPTARQSSFDTVTTAGAATATATVSDKIGASNADGTGACLDSVRLP--------LVVRVIRHVRSLGVAMSLNEGLREARSELVARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQTNIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGCCIAHPSVILRRDRVIAAGGYDPEAEPAEDYDLWLRMDGSAPGCLANAGEVLLGLRKHGQNVSRVRQEEQRKVAHAAAVRAMSRLL------------DRDVKATQATAVRTPELAVSVEDLVEGSRLLCDL--EAIVIDQYLGGAEN------PQKRQEVATTEDNSASVE---NDGDG-----QRRWSRE----LISRDVEARLGALAVHAMKSFGGGAAPVLDIWRGRYPDRALLRVLGG 3806
            SIL MIAGF+P     PP AP++                A  SG S  TPA   A         RR VHMICFSKDRAFQLDQLL S+SRHL LA E    G            V L  SVL++ +   AA              +RAT                  S  + G             G    S SP     ++ME+SYD+VRRRHP+V F+RE PG FC QL  LV E  ++R + GE        EAFVLFAVDDMFFYRDF LP A+RLL++DPS+FC HLRLHPGITWSHTAGSPC VPPLS    H+ +    +   S              +                     DP  T    D+   R   H   + AA+F LL+F R + TGEW+YPWDLTGGLYRR DA+ VL G+V AYG  AAANPNLLE+HGH LL         +    + +  S +    S +   V   +ATP+         +C     +S   +  PP+ G       P ATA     +  A                     SAAPRC CSGRAVVSSLAVNRVQSTYSTP+Y S  GGVLDL+RRLWS V          +RC    VD E  ++              G RQ+   G                  ERG+  G GGF+ RAYRRR F SVHVG+L+F+                                                   GGGD                                           +VTVLLPVKNGG RL++AV+SV  C++R P  W  ELLI+DDGS DGAV+ A+  V      + +  G  R E +      +G             G G   GE     VP+  ++    V    + T+   V D  G+S + G+G   D+  +           V+V+RH R+LG+A SLNEGLREA S LVARMDADDVCMP RL++Q  FM  NP VSVLGS+VATF+GD +R G        G  KRQ Q D    +T  +LPA GVQRI R+PTDRAFL+WSLLFGCC+AHPSV+LRRDRVI AGGYDP  EPAEDYDLWLRM+  APGC+AN GEVLLGLRKH  NVSR R++EQ + A AAA RAM+RLL            DRDV+  QA A+R PE A S  DL   ++LL DL   A       GGA        P + ++    ED S +     +DGD      +R W +     +I+RDVEARLGA+AVHAM  FG GAAPVLD W+ R+PDR LL VL G
Sbjct:    5 SILSMIAGFIPPSSDPPPNAPSSPPRRPSPTMSGRSSTAAVDSGSSCQTPAD--AAASRSAVPGRRLVHMICFSKDRAFQLDQLLASASRHLCLAQEGGRQGGGEAGDDLVVTPVRLRASVLYLATAGVAAGPAAAVTVAPV---SRATXXXXXXXXXXXXXXXXXESLEVGG-------------GRTRCSYSPQ----KTMEESYDLVRRRHPNVRFLRERPGEFCTQLRSLVGEEWEERAKKGEGGHDEEGGEAFVLFAVDDMFFYRDFMLPDAVRLLATDPSMFCVHLRLHPGITWSHTAGSPCSVPPLSPTVGHVVQSQQGVDHGSGGAEGSXXXXXXXXQRGKGGFDVCCLGGREEDHPAGDPIGTSGGSDAWSRRQRRHPPVVAAAEFGLLSFTRAQGTGEWDYPWDLTGGLYRRADAVAVLDGIVSAYGAGAAANPNLLEHHGHTLLLQQQRGLPQRSEATEVATASDISTSKSDTNNAVRDPTATPSSSRPFLAPLACD----KSEAVAGTPPSHGDPKTASPPPATAESGSRLAAAXXXXXXXXXXXXXXXXXPSTVSAAPRCGCSGRAVVSSLAVNRVQSTYSTPVYASREGGVLDLNRRLWSDVQRPLPSSSTITRCDAADVDAEAGQNTGPGAELGEVEPARGERQELENGGGKARDAASEAGGRCEKGERGSGRG-GGFDGRAYRRRVFNSVHVGELWFE---------------------------------------------------GGGDXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXNTVTVLLPVKNGGDRLLEAVESVAACSRRMPRGWCSELLIVDDGSGDGAVDRAVTAVTAGAGAAADFAGCGRRELDGSRQHPEGARRRACDKERVMDGCGGGEGEK----VPS--EADEGGVGHPESGTSDCCV-DCDGSSGSGGSGVTDDARAVVRGEGGTPGFTVKVLRHDRTLGLAESLNEGLREATSNLVARMDADDVCMPGRLEQQVAFMLENPHVSVLGSSVATFSGDSIRVG--------GERKRQQQPDTDDASTRRHLPAAGVQRIARHPTDRAFLAWSLLFGCCVAHPSVMLRRDRVIEAGGYDPATEPAEDYDLWLRMEALAPGCVANLGEVLLGLRKHEANVSRERRQEQGEAADAAAARAMTRLLNSGWHRRRGVAPDRDVRTAQAAAIRRPECAASPGDLAGAAQLLGDLGEAATAAVTGAGGAAGTDGVVVPSQVRDRGPDEDGSHNGRGRGHDGDDGADGDERPWQQREEALMIARDVEARLGAMAVHAMSRFGEGAAPVLDEWKRRFPDRPLLFVLRG 1250          
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: D7FI43_ECTSI (Bifunctional glycosyltransferase, family GT74 / family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI43_ECTSI)

HSP 1 Score: 558 bits (1437), Expect = 2.030e-175
Identity = 422/1078 (39.15%), Postives = 512/1078 (47.50%), Query Frame = 3
Query:  855 MEDSYDMVRRRHPSVTFIREEPGRFCDQLLELV-ESSKDRKQGGEA-------EAFVLFAVDDMFFYRDFGLPGALRLLSSDPSVFCAHLRLHPGITWSHTAGSPCDVPPLSHIGRKVSSLGRNSDQLRAPASYTRTATKDPPKTDSDQGRVMDHGRPMVAADFSLLTFARNEVTGEWNYPWDLTGGLYRREDAMVVLHGVVGAYGKKAAANPNLLEYHGHRLLSKIRCQQQSRHSSVHPGSSRSRPPVSGGSATPAVIEAVTNERSCHAAGRESRVQSPMPPAEGKGAPAATAXXXXAVKVASAAPRCACSGRAVVSSLAVNRVQSTYSTPIYNSHGGGVLDLDRRLWSLV--------GATSRC--VDGEHERDES--------------GHRQDTTRGT-------------LNERGAMTGRG-GFNARAYRRRSFASVHVGQLFFQDNTGEAHADVTQRFETKEARARQRGNRAGVAVESSSIAFARHDCVSSKNARGGGDPRRIDVRPGSTGSQPQPSGYIGSASRPGEINTICSEVLSQPKPSVTVLLPVKNGGARLVDAVQSVLTCAQRTPTNWKIELLIIDDGSEDGAVEEALA--TVGLNVPSGEAVGTERGENE--------------EKEHGSKGTVGSGKKFGESATAD---VPTARQSSFDTVTTAGAATATATVSDKIGASNADGTGACLDSVRLP--------LVVRVIRHVRSLGVAMSLNEGLREARSELVARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQTNIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGCCIAHPSVILRRDRVIAAGGYDPEAEPAEDYDLWLRMDGSAPGCLANAGEVLLGLRKHGQNVSRVRQEEQRKVAHAAAVRAMSRLLDRDVKATQATAVRTPELAVSVEDLVEGSRLLCDL--EAIVIDQYLGGAEN------PQKRQEVATTEDNSASVEN---------DGDGQRRWSRE----LISRDVEARLGALAVHAMKSFGGGAAPVLDIWRGRYPDRALLRVLGG 3806
            ME+SYD+VRRRHP+V F+RE PG FC QL  LV E  ++R + GE        EAFVLFAVDDMFFYRDF LP A+RLL++D  V                        P+   G   +   R      AP                           + AA+F LLTF R + TGEW+YPWDLTGGLYRR+DA+ VL G+V AYG  AAANPNLLE+HGH LL + +     R +      SR  P                                                        SAAPRC CSGRAVVSSLAVNRVQSTYSTP+Y S  GGVLDL+RRLWS             +RC   D E E  +S              G RQD   G                +R   +GRG GF+ RAYRRR F SVHVG+L+F+                                                   GGGD   ++   G                              +   +VTVLLPVKNGG RL++AV+SV  CA+R P  W  ELLI+DDGSEDGAV+  +   T G   P+ +  G  R E +              +KE G     G G+   ES+ AD   V      S D               D+ G+S   G+G   D+  +         + V+V+RH R++G+A SLNEGLREA S+LVARMDADDVCMP RL++Q  FM  NP VSVLGS+V+ F+GD VR G        G  KRQ Q      +   +LPA GVQRI R+PTDRA L+WSLLFGCC+AHPSV+LRRDRVI AGGYDP  EPAEDYDLWLRM+  APGC+AN GE                                            A A+R PE A S  DL   +RLL DL   A       GGA        P + +++   ED S +            DGD +RRW +     +I+RDVEARLGA+AV+AM  FG GAAPVLD W+ R+PDR LL VLGG
Sbjct:    1 MEESYDLVRRRHPNVRFLRERPGEFCTQLRSLVGEKWEERAKEGEGGHDEEGGEAFVLFAVDDMFFYRDFRLPDAVRLLATDRPV----------------------GEPIGKAGGSEAWSRRXXXXXHAPV--------------------------VAAAEFGLLTFTRAQGTGEWDYPWDLTGGLYRRDDAVAVLDGIVSAYGAGAAANPNLLEHHGHTLLLQQQRGLPQRKAVAGAPPSRGDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------STVSAAPRCGCSGRAVVSSLAVNRVQSTYSTPVYASREGGVLDLNRRLWSSSVRRPLPSSSRITRCDAADVEAEDGQSTGPGAEMAEVEPARGERQDLENGDGKAGDAAAEAGGRCEKRERRSGRGAGFDGRAYRRRVFNSVHVGELWFE---------------------------------------------------GGGDSEEVEANCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREN-TVTVLLPVKNGGGRLLEAVESVAACARRMPRGWCSELLIVDDGSEDGAVDRVVTAVTAGAGAPA-DVAGCGRRELDGSRQHPEGARRRACDKERGVIDGCGGGEGEKESSEADEGGVGHPESGSNDCCV------------DRDGSSGGGGSGVSNDARAVVPGEGGTPGVTVKVLRHDRTVGLAESLNEGLREATSDLVARMDADDVCMPGRLEQQVAFMVENPHVSVLGSSVSIFSGDSVRVG--------GEHKRQQQPGTDAASVRRHLPAAGVQRIARHPTDRALLAWSLLFGCCVAHPSVMLRRDRVIEAGGYDPATEPAEDYDLWLRMEALAPGCVANLGE--------------------------------------------AAAIRRPECAASPGDLAAAARLLGDLGEAATAAVTGAGGAAGTDGVVVPSQVRDLGPDEDGSHNGRGRGHDRDYGPDGD-ERRWQQREEELMIARDVEARLGAMAVYAMNRFGEGAAPVLDEWKRRFPDRPLLFVLGG 893          
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: A0A836CDB2_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB2_9STRA)

HSP 1 Score: 126 bits (316), Expect = 7.450e-26
Identity = 112/365 (30.68%), Postives = 146/365 (40.00%), Query Frame = 3
Query:  864 SYDMVRRRHPSVTFIREEPGRFC--DQLLELVESSKDRKQGGE----AEAFVLFAVDDMFFYRD--FGLPGALRLLSSDPSVFCAHLRLHPGITWSHTAGSPCDVPPLSHIGRKVSSLGRNSDQLRAPASYTRTATKDPPKTDSDQGRVMDHGRPMVAADFSLLTFARNEVTG----EWNYPWDLTGGLYRREDAMVVLHGVVGAYGKKAAA-----NPNLLEYHGHRLLSKIRCQQQSRHSSVHPGSSRSRPPVSGGSATPAVIEAVTNERSCHAAGRESRVQSPMPPAEGKGAPAATAXXXXAVKVASAAPRCACSGRAVVSSLAVNRVQSTYSTPIYNSHGGGVLDLDRRLWSLVGATSRCV 1907
            SY  V++ HP+V F+ E PG  C  D L  LV SS+ R    +    A +FV FAVDDM F+    F L     LL  DP VF AHL+L P IT+SH A +PC VP L               QL    S+T           S  G  +D           + T+ R  V G    +W+YPWDLTGGLYR  D + VL G+   +     A     NPNLLE++G +LL                                           C  A                               A+A    AC  R ++S++ VNRVQ+T+ TP+Y + G  V  L+  LWS       C+
Sbjct:  105 SYQHVKQLHPAVRFVEESPGTTCFMDLLAALV-SSQGRPDSADDPSQAASFVWFAVDDMVFHAHTPFPLAAVTTLLHHDPRVFGAHLKLSPCITFSHAANAPCRVPQL---------------QL----SFT----------GSGGGASVD-----------MFTYDRRSVAGAGPNDWDYPWDLTGGLYRELDVLAVLDGIRNLWQSATDAPPRPMNPNLLEFYGDKLL-------------------------------------------CSGA-----------------------------FTAAATHTMACVARQLLSAVTVNRVQTTFGTPVYAAGGCDVRALEALLWSAATVDVSCI 356          
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: A0A2D4BMR9_PYTIN (Glycosyll transferase family 2 putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMR9_PYTIN)

HSP 1 Score: 122 bits (306), Expect = 2.110e-24
Identity = 73/201 (36.32%), Postives = 102/201 (50.75%), Query Frame = 3
Query: 2796 VRVIRHVRSLGVAMSLNEGLREARSELVARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQTNIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGCCIAHPSVILRR---DRVIAAGG--YDPEAEPAEDYDLWLRMDGSAPGCLANAGEVLLGLRKHGQNVSRVRQEEQ 3383
            ++++ +  +LGVA SLN+G   A+   VARMD DDV  PER++ Q +FM  +P V +LG+++   N D             G    +  + E    T            V YPT      W LLFGC +AHP+V++ R   + ++A+ G  Y   A   EDYDLWLR        + N G+VLL  RKH    S VR+EEQ
Sbjct:  442 IKLVHNETNLGVAASLNKGFSLAQGTFVARMDGDDVAFPERIQRQLQFMLEHPHVDILGTSIVVGNSD------------DGCSAGKDPKTESKTKTKTTRDVWPAFETVVYPTSPLATKWQLLFGCFVAHPTVMMHRRVLNTIVASNGALYSTSAPACEDYDLWLRCAYQHNLTVMNMGDVLLFHRKHALRTSTVRREEQ 630          
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: A0A024TM25_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TM25_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.390e-24
Identity = 86/252 (34.13%), Postives = 130/252 (51.59%), Query Frame = 3
Query: 2751 DGTGACLDS-VRLPLVVRVIRHVRSLGVAMSLNEGLREARSELVARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQTNIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGCCIAHPSVILRRDRVIAAGGYDPEAEPAEDYDLWLRMDGSAPGCLANA-------GEVLLGLRKHGQNVSRVRQEEQRKVAHAAAVRAMSRLLDRDVKATQATAVRTPEL 3482
            D T A +++ V+L    R++++  ++GVA +LN G+  A  + +ARMD DD+ +P+RL  Q  F+  +P V ++GSA+A    D   +       + G+             T    P+D + ++V YPT  A   WSL  GC +AHP+V  RR  V+    Y       EDYDLWLR+        AN        G  LL  RKHG+N S  ++++QR+ AH AA  A+ RLL R +++     VR+  L
Sbjct:  344 DSTVAIVEAFVKLDRRFRLVKNPMNMGVAKTLNRGIELATGDFIARMDGDDIALPDRLNMQLAFLQTHPDVDIVGSAIALIGPDYTLA------YENGS-------------TADASPSDPL-KVVVYPTTVARTRWSLFMGCMLAHPTVFFRRC-VVDRFRYAESLGSGEDYDLWLRLAVPPSDPPANPVVKMMSLGTPLLLHRKHGRNASTRKRDQQRQEAHDAAHAAIERLLQRPIESNVVKLVRSHAL 574          
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: A0A5D6Y640_9STRA (PDEase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y640_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.650e-24
Identity = 98/344 (28.49%), Postives = 150/344 (43.60%), Query Frame = 3
Query: 2796 VRVIRHVRSLGVAMSLNEGLREARSELVARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQTNIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGCCIAHPSVILRRDRVIAAGGYDPEA------EPAEDYDLWLRMDGSAPGCLANAGEVLLGLRKHGQNVSRVRQEEQRKVAHAAAVRAMSRLLDR----------DVKATQATAVRTPELAVSVEDLVEGSRLLCDLEAIVIDQYLGGAENPQKRQEVATTEDNSASVENDGDGQRRWSRELISRDVEARLGALAVHAMKSFGGGAAPVLDIWRGRYPD 3779
            VR++R+  +LGVA SLN+G   A  ELVARMD DDV  P R++ Q +++  NP V ++G++V         + ++                  L  T V            YPT      W +LFGC IAHP+V++RR  +    G +P          +EDY+LWLR   +    + + G+VL+  RKHG NVS+VR+E Q     A A + +  +             D+   +   +    L+ SV+DL   + LL  L+A +        E P      A  E     +              I +DV +R G LA+ AM       + +   +  R+P+
Sbjct:  433 VRLVRNAANLGVAASLNKGFAAATGELVARMDGDDVSFPSRIERQVDYLLENPHVGIVGASVLVLRDSAEPASRVHPEFA-------------LYETAV------------YPTSPLVTKWRMLFGCFIAHPTVMMRRTVLATLAGTEPREYYSTAQSSSEDYELWLRCLYAHNLTVQSMGDVLVVHRKHGSNVSKVRRERQVAETQAIATKYILSVAAGSGGGGDDGGVDISRIRVRLLFDVNLSDSVDDLKGATELLHKLQAAI-------CERPTSSSRAAQDEHACEQL-------------YILQDVASREGELALQAMTLDSIAGSQMWSSFASRHPE 731          
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: A0A6A0I4Z7_9BACT (Glycosyltransferase n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A6A0I4Z7_9BACT)

HSP 1 Score: 115 bits (289), Expect = 4.330e-24
Identity = 74/195 (37.95%), Postives = 101/195 (51.79%), Query Frame = 3
Query: 2796 VRVIRHVRSLGVAMSLNEGLREARSELVARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQTNIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGCCIAHPSVILRRDRVIAAGGYDPEAEPAEDYDLWLRMDGSAPGCLANAGEVLLGLRKHGQNVSRVRQEE 3380
            +R+I +  +L +  +LN+G+  AR E +ARMDADD+ +P+RL +Q +F+ AN  V VLG AV   +     SG                                  +I+R+P+   FL WSL F C IAHPSV++RR  V  AGGY       EDYDLW R+  S    L+N  EVLL LRKH  N ++   +E
Sbjct:   61 IRLIHNETNLKLIATLNKGIEVARGEYIARMDADDISLPDRLAKQFDFLNANSKVGVLGCAVKLID----HSGSQ-------------------------------DQIMRFPSAHGFLRWSLFFYCPIAHPSVMMRRVLVSDAGGYRSTMLHVEDYDLWWRL--SQKTRLSNLQEVLLLLRKHEYNTTKTHFDE 218          
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: A0A6G0XQL4_9STRA (Glyco_trans_2-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQL4_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.150e-23
Identity = 102/344 (29.65%), Postives = 159/344 (46.22%), Query Frame = 3
Query: 2751 DGTGACLDSVRLPLVVRVIRHVRSLGVAMSLNEGLREARSELVARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQTNIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGCCIAHPSVILRRDRVIAAGGYDPEAEPAEDYDLWLRMDGSAPGCLANAGEVLLGLRKHGQNVSRVRQEEQRKVAHAAAVRAMSRLLDRDVKATQATAVRTPELAVSVEDLVEGSRLLCDL--EAIVIDQYLGGAENPQKRQEVATTEDNSASVENDGDGQRRWSRELISRDVEARLGALAVHAMKSFGGGAAPVLDIWRGRYP 3776
            D T A + +   P + R+I++  + GVA +LN GL  AR + +ARMDADDV +P RL+ Q  ++ A+P V ++GSA+          G+ +++                       P     +++ YPT      W++  GC +AHP+V+ RR+  IA   Y  +    EDYD+WLR+   A   + + G  LL  RKHG N S +++++QR+ A+ AA +A+   L   VK      +R   L    +DL E + LL     EAI I + L       KR+ + T++D                R  I  +  +R G +A  AM         +   W   YP
Sbjct:  305 DDTAALVQNYPDPRI-RLIQNETNSGVAKTLNHGLALARGDFIARMDADDVALPNRLEMQVAYLLAHPDVDLIGSAIGVI-------GESESSY----------------------PC----KVIVYPTSLHRTHWAMFMGCMLAHPTVLFRRNHTIATFRYAEDYGSGEDYDMWLRLL-QAGVKMRSLGTPLLLHRKHGSNASTLKRDQQRQEANTAAHKAIMAFLGHPVKLEAVLLLRAHTLH---QDLGEATSLLDSHAEEAIQIVEDL-------KRRCLETSDDQE--------------RAAIESEAMSRHGEIAFRAMIHDPTKGVMLWQKWVQAYP 589          
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: A0A842ZU15_9ARCH (Glycosyltransferase n=1 Tax=Thermoplasmata archaeon TaxID=1906666 RepID=A0A842ZU15_9ARCH)

HSP 1 Score: 114 bits (286), Expect = 1.470e-23
Identity = 76/215 (35.35%), Postives = 108/215 (50.23%), Query Frame = 3
Query: 2805 IRHVRSLGVAMSLNEGLREARSELVARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQTNIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGCCIAHPSVILRRDRVIAAGGYDPEAEPAEDYDLWLRMDGSAPGCLANAGEVLLGLRKHGQNVSRVRQEEQRKVAHAAAVRAMSRLLDRDVKA 3449
            I++ + LG+A SLN+G+  AR E +ARMDADDV +PERL  Q +F+  +P + VLG+                 +I  G G                         V++PT    L W L F   I HPSV++RR  V  AGGY  +   AEDYDLW R+  S    L+N  +VLL LRKH  N S +   E+++ +   +   +S +L+ +V A
Sbjct:   73 IQNEKRLGLANSLNKGIELARGEYIARMDADDVSLPERLARQVDFLETHPEIGVLGTGF---------------HIMDGYG--------------------NTSHAVQFPTQDGVLRWCLCFYNPIVHPSVMMRRKIVEQAGGYSSDMTHAEDYDLWRRL--SCVTSLSNLQDVLLHLRKHDANGSILNPPEEQRFSAQISSLMISHILNEEVSA 250          
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Match: A0A1F4EX16_9PROT (Glyco_trans_2-like domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EX16_9PROT)

HSP 1 Score: 113 bits (283), Expect = 3.950e-23
Identity = 71/189 (37.57%), Postives = 97/189 (51.32%), Query Frame = 3
Query: 2796 VRVIRHVRSLGVAMSLNEGLREARSELVARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQTNIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGCCIAHPSVILRRDRVIAAGGYDPEAEPAEDYDLWLRMDGSAPGCLANAGEVLLGLRKHGQNVS 3362
            +R++R+  + GV  +LN GL EA  E +ARMDADD+ +P+RL +Q  F+ A+P V VLGSA+   +              QGA                     G+  +VR+P     + W+L F   IAHPS ++R +   + GGY  EA   EDYDLW R   +    LAN   VLL LRKH  NV+
Sbjct:   54 IRLLRNSSNRGVIATLNRGLEEAHGEYLARMDADDISLPDRLAQQVAFLDAHPEVGVLGSAIELMDA-------------QGA--------------------PGI--LVRFPASHNLIRWALAFYSPIAHPSAMMRTEIAASLGGYRSEARHCEDYDLWWRA--TRVTALANLETVLLRLRKHDVNVT 205          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig870.2.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K794_9PHAE2.660e-23541.23Glyco_trans_2-like domain-containing protein n=1 T... [more]
D7FI43_ECTSI2.030e-17539.15Bifunctional glycosyltransferase, family GT74 / fa... [more]
A0A836CDB2_9STRA7.450e-2630.68Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A2D4BMR9_PYTIN2.110e-2436.32Glycosyll transferase family 2 putative n=1 Tax=Py... [more]
A0A024TM25_9STRA2.390e-2434.13Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A5D6Y640_9STRA3.650e-2428.49PDEase domain-containing protein n=1 Tax=Pythium b... [more]
A0A6A0I4Z7_9BACT4.330e-2437.95Glycosyltransferase n=1 Tax=candidate division KSB... [more]
A0A6G0XQL4_9STRA1.150e-2329.65Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A842ZU15_9ARCH1.470e-2335.35Glycosyltransferase n=1 Tax=Thermoplasmata archaeo... [more]
A0A1F4EX16_9PROT3.950e-2337.57Glyco_trans_2-like domain-containing protein n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig870contigA-nodosum_M_contig870:37220..43970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FI43
PFAMsGlycos_transf_2
Model size4545
Max annot lvl2759|Eukaryota
KEGG koko:K12245
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006486,GO:0006807,GO:0008150,GO:0008152,GO:0008378,GO:0008417,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016263,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0031127,GO:0034645,GO:0036065,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048531,GO:0070085,GO:0071704,GO:0140096,GO:0140103,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons6
Evalue6.55e-180
EggNOG OGs2E273@1|root,2S9FF@2759|Eukaryota
Ec32 ortholog descriptionBifunctional glycosyltransferase, family GT74 / family GT2
Ec32 orthologEc-10_003470.1
EC2.4.1.69
DescriptionGlycosyl transferase family 2
Cds size3489
COG categoryS
BRITEko00000,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig870.2.5prot_A-nodosum_M_contig870.2.5Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig870 37546..43240 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870266.5815785-UTR-A-nodosum_M_contig870:37219..375451680870266.5815785-UTR-A-nodosum_M_contig870:37219..37545Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig870 37220..37545 +
1680870266.813418-UTR-A-nodosum_M_contig870:43240..439701680870266.813418-UTR-A-nodosum_M_contig870:43240..43970Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig870 43241..43970 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870266.5965846-CDS-A-nodosum_M_contig870:37545..382931680870266.5965846-CDS-A-nodosum_M_contig870:37545..38293Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig870 37546..38293 +
1680870266.6092606-CDS-A-nodosum_M_contig870:39051..393761680870266.6092606-CDS-A-nodosum_M_contig870:39051..39376Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig870 39052..39376 +
1680870266.619978-CDS-A-nodosum_M_contig870:39618..411491680870266.619978-CDS-A-nodosum_M_contig870:39618..41149Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig870 39619..41149 +
1680870266.6324513-CDS-A-nodosum_M_contig870:41768..421611680870266.6324513-CDS-A-nodosum_M_contig870:41768..42161Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig870 41769..42161 +
1680870266.7171655-CDS-A-nodosum_M_contig870:42440..427071680870266.7171655-CDS-A-nodosum_M_contig870:42440..42707Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig870 42441..42707 +
1680870266.7996376-CDS-A-nodosum_M_contig870:43015..432401680870266.7996376-CDS-A-nodosum_M_contig870:43015..43240Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig870 43016..43240 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig870.2.5

>prot_A-nodosum_M_contig870.2.5 ID=prot_A-nodosum_M_contig870.2.5|Name=mRNA_A-nodosum_M_contig870.2.5|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1163bp
MESSILDMIAGFMPSGPPEAPATAEGSGLSLSTPARTPAVGRTHDEMRRR
DVHMICFSKDRAFQLDQLLESSSRHLLLADEDQSSGIRVTLHTSVLFIVS
PPSAAAAAAAATSTTSTASTRATPVKPKVISSQVVNIGGKNSARLCGSVG
SNTAGRSGALGEGNVSVSPVGGPVRSMEDSYDMVRRRHPSVTFIREEPGR
FCDQLLELVESSKDRKQGGEAEAFVLFAVDDMFFYRDFGLPGALRLLSSD
PSVFCAHLRLHPGITWSHTAGSPCDVPPLSHIGRKVSSLGRNSDQLRAPA
SYTRTATKDPPKTDSDQGRVMDHGRPMVAADFSLLTFARNEVTGEWNYPW
DLTGGLYRREDAMVVLHGVVGAYGKKAAANPNLLEYHGHRLLSKIRCQQQ
SRHSSVHPGSSRSRPPVSGGSATPAVIEAVTNERSCHAAGRESRVQSPMP
PAEGKGAPAATAAAATAVKVASAAPRCACSGRAVVSSLAVNRVQSTYSTP
IYNSHGGGVLDLDRRLWSLVGATSRCVDGEHERDESGHRQDTTRGTLNER
GAMTGRGGFNARAYRRRSFASVHVGQLFFQDNTGEAHADVTQRFETKEAR
ARQRGNRAGVAVESSSIAFARHDCVSSKNARGGGDPRRIDVRPGSTGSQP
QPSGYIGSASRPGEINTICSEVLSQPKPSVTVLLPVKNGGARLVDAVQSV
LTCAQRTPTNWKIELLIIDDGSEDGAVEEALATVGLNVPSGEAVGTERGE
NEEKEHGSKGTVGSGKKFGESATADVPTARQSSFDTVTTAGAATATATVS
DKIGASNADGTGACLDSVRLPLVVRVIRHVRSLGVAMSLNEGLREARSEL
VARMDADDVCMPERLKEQTEFMYANPGVSVLGSAVATFNGDCVRSGQMQT
NIKQGAGKRQPQRDEQLLNTIVNLPADGVQRIVRYPTDRAFLSWSLLFGC
CIAHPSVILRRDRVIAAGGYDPEAEPAEDYDLWLRMDGSAPGCLANAGEV
LLGLRKHGQNVSRVRQEEQRKVAHAAAVRAMSRLLDRDVKATQATAVRTP
ELAVSVEDLVEGSRLLCDLEAIVIDQYLGGAENPQKRQEVATTEDNSASV
ENDGDGQRRWSRELISRDVEARLGALAVHAMKSFGGGAAPVLDIWRGRYP
DRALLRVLGGKA*
back to top

mRNA from alignment at A-nodosum_M_contig870:37220..43970+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig870.2.5 ID=mRNA_A-nodosum_M_contig870.2.5|Name=mRNA_A-nodosum_M_contig870.2.5|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6751bp|location=Sequence derived from alignment at A-nodosum_M_contig870:37220..43970+ (Ascophyllum nodosum dioecious)
CAGCGGCAATCTGGAGTCAGCGGCAAACCAGCCCAATAGCGCAATGACAC ACTTTTGAAGAGGGTTGGCGACGTTGAAAAATACTTCCAGTCGGTTTTTC TGCCCCAGGTGACTCGCAACGGATGAGTTGCTGACTCGAGAGAGGCATCA TCCGCACCACACGTTCTCGGGACTACAGTAGTACTGTACCTAAACTGTAC TACATTATACTGTCATCAGAACTTTACAGCCGAAACACAAGAGGGAACCT CCTCGTCACAGGAGGGCAGCGATCACCTGACCCACACTAGCGACAGAGAA CCATCCCAGATCGGCTTCAATCCACCATGGAGAGCTCAATTCTGGATATG ATTGCTGGCTTCATGCCCTCCGGTCCTCCAGAGGCTCCCGCAACCGCGGA GGGTTCGGGTTTATCACTCTCTACTCCCGCCAGGACTCCGGCTGTTGGAC GCACGCACGACGAAATGAGGCGGCGAGACGTACATATGATATGTTTCTCG AAGGATCGCGCATTCCAGCTGGATCAGTTGCTGGAATCCTCGAGCCGCCA CCTACTACTGGCAGATGAGGACCAGAGCTCTGGGATTAGGGTTACGTTGC ACACGTCTGTGCTGTTCATTGTTAGTCCACCGTCAGCAGCAGCGGCAGCA GCAGCAGCAACATCAACAACATCAACGGCGTCAACAAGAGCAACACCCGT CAAACCAAAGGTAATATCATCACAGGTGGTAAACATCGGCGGTAAAAACA GTGCCCGACTCTGCGGAAGCGTAGGCAGCAATACTGCCGGCAGGAGTGGT GCCCTTGGCGAGGGGAATGTGTCGGTCTCCCCGGTCGGCGGCCCAGTCCG GTCGATGGAGGACTCTTACGACATGGTGCGGCGACGACATCCCTCCGTGA CTTTTATTCGCGAGGAGCCCGGCAGGTTTTGTGACCAGTTGCTCGAGCTC GTAGAGAGTAGCAAGGACAGGAAACAAGGGGGAGAGGCGGAGGCGTTTGT GCTCTTTGCTGTGGATGACATGTTCTTCTACAGAGATTTTGGTCTGCCAG GCGCTCTTCGGCTACTGTCAAGCGGTGAGGCAAAGAACCGTTTTACTCCC TTTAAAATTATAAGTTTTGCACCCGGGAATGTGATTGCTGCGGGGTTGAC ACTGTTCTATAACAGTAGTGTGAGCCTCGTGCAAAATTACGTGCGGATTT AGAGATTGTGCCTCTCCCTTAGAAGACTTATGTCAATCAGGAAGAACGAT CTGCGCAGCGAATAGCTGGATATCTCACATCGTTTCTCCGATAATATAAA AACACGTGCGACTTCCCCCCCCCACTCTTTGGACGTCCTGCAACCAACGA ACTTCAAGCCAAAGTCGCTTGTACTTGGCGAGTAAATGGACGAGACTATG ATGCACCCAAAACCGCTTGAATTGTTTTTAGATCAGCACGGCTGCGTTTT CGGGGGCGTGAAACGTATTTTTCCAGTAGTAGGAAGAGTAGGCTGTGTTA CCATGTGGCTGCATGACGATTCTACCTGGGTCGCACGTGAATTGCCGTCA GTAGTTTGCCATGGTATTTAATGCATGACCCTCCCGAAGGGCTTCGCGCA CATGCCATGCAGCGAGCTGTGTTAAACAACGCTCATTGGCTGGCCTGCGG GCAAGCACGCAAGCGCGCATGTGAAGGAACGTTGAGATCTAGAAAATGTT GTTTTGGAAATCGTTATTGCGCTATGATTTTGGGAGCGAATCAATCGTAC CGAAGCACTTCGCCTCGGGAGCCTCTTGAATGCGATGTCGACACCTCCTC CGCTTCTAATCTGCCGTGGTTACGTTGTACAGACCCGTCGGTGTTCTGCG CCCATCTTAGGCTCCACCCGGGGATTACGTGGTCCCACACGGCAGGATCG CCGTGCGACGTGCCTCCCCTGTCGCACATTGGGCGCAAAGTATCGAGCTT GGGCAGAAATTCCGACCAGCTTCGGGCACCTGCATCATACACGCGCACGG CGACTAAGGATCCTCCAAAAACAGATTCAGACCAAGGTCGAGTCATGGAT CACGGGCGTCCGATGGTTGCGGCAGATTTTAGCCTTCTGACGTTTGCTCG AAATGAAGTAACGGGTGAATGGAATTACCCGTGGGATCTAACCGGAGGGC TTTATAGGTGCGTAGAACACCAACAGTTACCGTCGAGAACCAGCGATGGT GACATCGGGTTGTTATGATCATGCCTCGGGCGACACAGCCTTGGTAGCGT TACGCTACTAGCGCGTAGAATTCTACTTTTTTTTTTGTAAAGTCCCGGTG TGGGCCAGGCTAAACCTTCCGAACCTCTTTTTGGGTTAGCGTTAATCTCC CCCCCCCCTCCCCTCAATCTCTGTTCCTGTCTACGGTATAACCTGTCAGG CGTGAGGACGCGATGGTAGTCTTACATGGTGTCGTCGGCGCCTACGGCAA AAAAGCGGCCGCCAATCCCAACCTCCTAGAGTACCACGGGCATCGCTTAC TTTCGAAAATACGGTGTCAACAGCAATCGAGACACAGTAGTGTTCATCCC GGGTCTTCTCGTTCACGCCCGCCGGTTTCTGGTGGATCCGCAACTCCTGC CGTAATCGAAGCGGTTACAAACGAGAGGTCGTGTCATGCTGCAGGGAGAG AATCGCGCGTCCAATCGCCAATGCCCCCCGCGGAAGGAAAGGGCGCTCCC GCCGCCACGGCTGCCGCTGCCACCGCAGTAAAAGTCGCAAGCGCCGCCCC GCGGTGCGCCTGCTCAGGCCGCGCAGTTGTCTCTTCTCTGGCCGTTAATC GTGTCCAGTCGACCTACTCGACGCCGATCTACAATTCGCATGGGGGTGGG GTCCTCGACCTCGATCGCAGGCTTTGGTCCCTCGTGGGGGCGACGTCCCG CTGCGTCGACGGAGAGCACGAGCGTGACGAATCTGGACATCGACAAGACA CTACTAGAGGAACCTTAAACGAACGTGGTGCAATGACAGGAAGAGGAGGG TTCAACGCGAGAGCCTACCGACGGCGATCCTTTGCCTCCGTGCACGTGGG CCAGCTTTTCTTCCAGGACAATACTGGAGAGGCTCACGCCGATGTGACTC AACGGTTTGAAACCAAGGAAGCTCGTGCGCGACAGCGCGGAAATCGGGCC GGCGTCGCGGTGGAGTCATCGTCCATCGCGTTTGCGCGCCACGACTGTGT TTCGAGCAAGAACGCTCGCGGCGGAGGTGACCCTAGGCGCATAGACGTTC GCCCTGGTTCGACCGGATCGCAACCTCAACCAAGCGGCTATATAGGCAGC GCTAGCCGTCCCGGTGAAATCAACACCATTTGCAGCGAGGTCCTGTCACA GCCAAAGCCCTCCGTGACGGTCTTGCTTCCAGTGAAAAACGGCGGCGCTC GACTCGTCGATGCTGTGCAGAGCGTGCTTACCTGCGCTCAGAGAACGCCG ACAAACTGGAAGATAGAACTCCTCATCATCGATGACGGGTCGGAAGACGG CGCGGTCGAAGAGGCTTTAGCTACCGTCGGTCTCAATGTTCCCTCAGGAG AGGCCGTCGGAACGGAGCGAGGGGAAAATGAGGAAAAGGAACATGGGTCA AAGGGAACCGTAGGATCGGGGAAAAAGTTTGGCGAGAGTGCGACTGCCGA CGTCCCAACCGCTCGTCAATCTAGCTTCGATACCGTCACCACCGCCGGCG CTGCCACTGCCACTGCGACGGTCTCCGACAAAATAGGTGCCTCCAACGCG GACGGCACTGGCGCTTGCTTGGATAGCGTACGCCTACCCCTTGTTGTGCG AGTCATCCGGCACGTCCGTAGTCTGGGTGTAGCGATGAGCCTGAACGAGG GGCTGCGAGAGGCCAGGAGCGAGCTGGTGGCGAGAATGGACGCGGACGAT GTGTGCATGCCCGAGCGCCTAAAAGAGCAGGTTGGAAAAGTTCGCATTCT TTTGTAACGACTCTCCCCCCGGGTAATCCCTACAGACTTCCACCACAGGT TTGTATGAATTGGGAAAACTCCCTTCATTTTTGTCCTATCATGTGGTACA CTCAGCGTTATATTGTTTACCACAAATGAGTAGAAAAAACGTCTCAAGTG ACGCTTGTGATATCGCGAGGACACACACACACCCAACATGAACGAATTCG CGAGATGCTCTTGAAGTCCCTCGCAGATGGTCACTCTTCCCTTGCCCTGT TGTTCCAACTGGTGGCTATCTTTTGTATGGTTCCGGTTTATCGCACGGGG TGCGATCTTGTTACAGTATTCGGTCTTGTTGCTGCAGCAGCGTCTCAATT TTGGCGTGCTTGTTTCCAACCCAAACTTGCCGCTGTACGCGATGACCACT ACCACTTCTAGTCTGCCGGATAAGGGAAGAATGAAGCAAGCCCAAAAACT GTAGCAACGAATCCTGAAAGAAAGAGGGAAATAAATCGCTCTGGATGAGA ATTATGATGAATGATTGCGGGAACCGTTCTTTGGGATTCCCTGCTTTCAA CCGCCTCCCCATTTCTCCACCCCGCGTGCTCGCCTCGCCATTGCTGCAGA CAGAGTTTATGTACGCCAACCCCGGCGTGTCGGTGTTGGGGAGCGCGGTG GCGACGTTCAACGGAGATTGCGTCCGCAGCGGCCAAATGCAGACCAACAT CAAGCAGGGCGCGGGTAAGCGTCAGCCGCAACGTGACGAGCAGCTACTAA ACACGATAGTGAACCTACCGGCGGACGGAGTGCAGAGGATCGTGAGATAT CCAACCGACCGTGCCTTCCTGTCGTGGTCGCTGCTATTCGGGTGCTGTAT CGCGCACCCGTCCGTGATTCTACGCCGCGATCGAGTGATCGCTGCTGGGG GTTACGATCCGGAAGCCGAGCCGGCGGAAGACTACGACCTTTGGCTGCGA ATGGACGGGTCTGCTCCTGGTTGCTTGGCGAACGCCGGGGAGGTGAGTCC TTACTACAAGCGATCTTTGGTGTATCTCCGTTAGTTTTTACAGGAATTCT CGTTTTTCGTAACACGAAGGCCTGCTCGACTAGCCGGGCGCTCTGCTTCG TCCACCGGGCCTCATGTTTCCACGTATTAGTCCGCGTTAACAATTTATGT GCCATCTTCCTTCCTTGCAGTCTTGCAGCGCCGCTCCCTCCCTAGAAGTA TCCTCGCACTCATAAAACAAGGGCGCCCCTACTCGCAACTTTCTTTGGGT GTTTCAAATCTCCCAACCTAGGTCCTCCTCGGGCTGCGCAAGCACGGCCA AAACGTTTCCCGAGTACGGCAAGAGGAACAGCGCAAAGTGGCGCACGCAG CCGCGGTTAGGGCGATGTCTCGCCTCCTTGATCGTGACGTGAAGGCGACT CAGGCTACGGCGGTTAGGACTCCCGAGTTGGCCGTTAGCGTGGAGGATCT TGTGGAGGGCTCACGATTACTCTGCGATCTGGAGGCTATCGTGATCGACC AATATCTGGGGGGCGCGGAGAACCCGCAAAAAAGACAGGTGCGGCAGAAT TTGTTTGAGGTGAGCGAGAGGGGGGGGTGTGGTCGTTCGGGAGGCGAGAA GTTAATTGTCGCAACAATGATTTATTTGGACCCCGAAGTTTTATTTTCCT TGCTTTGTTTACACTGCGTAATCATCTATTACACTCCACTCGAATAACCC CTAAGGCCTCGCGTGCGTTCTGCACGGAGGCGACACAAGGCCAATATCAG GTGGTTGTTTTTCTCCCCACCCTCCGAGATCATCGCAGTTCCTGCTGACG ACGGTCAGATTCACACACCGAGCCCACACACCTTGCCGACCGCCAGGAAG TCGCCACCACCGAGGATAATTCCGCCTCCGTGGAGAACGACGGAGATGGC CAGCGACGGTGGTCCAGAGAGCTGATCTCGAGGGACGTAGAGGCGCGTCT CGGAGCGCTCGCGGTGCATGCGATGAAAAGCTTTGGCGGCGGGGCGGCGC CGGTGCTCGACATATGGAGGGGGCGCTATCCTGATCGCGCGTTGCTCCGT GTGCTTGGTGGTAAGGCGTGAAACCTTAGCACGCCCCCGCGCCTCACGCG TCGACCTAAAATGACCGACATATTTTACAAACCTAGAGGTTCACAGACCG ATAATTCAAAGACTTCACGCACGTGTACACGTAAGGACACTTTGGTTTCC TCTTCGAGATCTCGGTATCTACCTTTGTCCCGTCATACCACATTTTTCTC CTTTGTGGTTCCGATTATCATTTTGCGTGGGAGCTATTCGCTGTGGCTTA TAACTGCAATTAAAAGCTGTCGGTCCATCTATACACATTGCCTCCTTTAT AATTAGTCTAATAATAATGTCATACCTTCGGGGCCAAGCGCGGCAGAGAG GACAGCGCTGGAGTCTCTACCGTATGTTTATCGCAATCATTAGCTGTTCT CGTTATCATTAGCTCGGTTTGGAAGGCGCCTAACGCGTTGGACTCCGGAA AGCCACGACTTGACTGTTTCTCATTGTTTCAAAACACGGCTAACTTAGAA TCCTGTCACAACTTGTTAACCTCTTATTATTCTCGGTACGGTACGACCAA AAACGATTTCTTGCTCGAAGTAGAAAATATTGCTTCACCTGCTGGGACAT GGAAAAAATAACTTAACTTTGAGTAGAAGTTGTGTCTAAATCCGTACAGT CGAACTTCGACCATGTTTATATTCACGGTTATGCTTTTGCCAAAACAAGC AAACCTGCAATTTGGCAAAATATATGATTATAAAACTTCCTGGATTATTT T
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig870:37220..43970+

>mRNA_A-nodosum_M_contig870.2.5 ID=mRNA_A-nodosum_M_contig870.2.5|Name=mRNA_A-nodosum_M_contig870.2.5|organism=Ascophyllum nodosum dioecious|type=CDS|length=3489bp|location=Sequence derived from alignment at A-nodosum_M_contig870:37220..43970+ (Ascophyllum nodosum dioecious)
ATGGAGAGCTCAATTCTGGATATGATTGCTGGCTTCATGCCCTCCGGTCC
TCCAGAGGCTCCCGCAACCGCGGAGGGTTCGGGTTTATCACTCTCTACTC
CCGCCAGGACTCCGGCTGTTGGACGCACGCACGACGAAATGAGGCGGCGA
GACGTACATATGATATGTTTCTCGAAGGATCGCGCATTCCAGCTGGATCA
GTTGCTGGAATCCTCGAGCCGCCACCTACTACTGGCAGATGAGGACCAGA
GCTCTGGGATTAGGGTTACGTTGCACACGTCTGTGCTGTTCATTGTTAGT
CCACCGTCAGCAGCAGCGGCAGCAGCAGCAGCAACATCAACAACATCAAC
GGCGTCAACAAGAGCAACACCCGTCAAACCAAAGGTAATATCATCACAGG
TGGTAAACATCGGCGGTAAAAACAGTGCCCGACTCTGCGGAAGCGTAGGC
AGCAATACTGCCGGCAGGAGTGGTGCCCTTGGCGAGGGGAATGTGTCGGT
CTCCCCGGTCGGCGGCCCAGTCCGGTCGATGGAGGACTCTTACGACATGG
TGCGGCGACGACATCCCTCCGTGACTTTTATTCGCGAGGAGCCCGGCAGG
TTTTGTGACCAGTTGCTCGAGCTCGTAGAGAGTAGCAAGGACAGGAAACA
AGGGGGAGAGGCGGAGGCGTTTGTGCTCTTTGCTGTGGATGACATGTTCT
TCTACAGAGATTTTGGTCTGCCAGGCGCTCTTCGGCTACTGTCAAGCGAC
CCGTCGGTGTTCTGCGCCCATCTTAGGCTCCACCCGGGGATTACGTGGTC
CCACACGGCAGGATCGCCGTGCGACGTGCCTCCCCTGTCGCACATTGGGC
GCAAAGTATCGAGCTTGGGCAGAAATTCCGACCAGCTTCGGGCACCTGCA
TCATACACGCGCACGGCGACTAAGGATCCTCCAAAAACAGATTCAGACCA
AGGTCGAGTCATGGATCACGGGCGTCCGATGGTTGCGGCAGATTTTAGCC
TTCTGACGTTTGCTCGAAATGAAGTAACGGGTGAATGGAATTACCCGTGG
GATCTAACCGGAGGGCTTTATAGGCGTGAGGACGCGATGGTAGTCTTACA
TGGTGTCGTCGGCGCCTACGGCAAAAAAGCGGCCGCCAATCCCAACCTCC
TAGAGTACCACGGGCATCGCTTACTTTCGAAAATACGGTGTCAACAGCAA
TCGAGACACAGTAGTGTTCATCCCGGGTCTTCTCGTTCACGCCCGCCGGT
TTCTGGTGGATCCGCAACTCCTGCCGTAATCGAAGCGGTTACAAACGAGA
GGTCGTGTCATGCTGCAGGGAGAGAATCGCGCGTCCAATCGCCAATGCCC
CCCGCGGAAGGAAAGGGCGCTCCCGCCGCCACGGCTGCCGCTGCCACCGC
AGTAAAAGTCGCAAGCGCCGCCCCGCGGTGCGCCTGCTCAGGCCGCGCAG
TTGTCTCTTCTCTGGCCGTTAATCGTGTCCAGTCGACCTACTCGACGCCG
ATCTACAATTCGCATGGGGGTGGGGTCCTCGACCTCGATCGCAGGCTTTG
GTCCCTCGTGGGGGCGACGTCCCGCTGCGTCGACGGAGAGCACGAGCGTG
ACGAATCTGGACATCGACAAGACACTACTAGAGGAACCTTAAACGAACGT
GGTGCAATGACAGGAAGAGGAGGGTTCAACGCGAGAGCCTACCGACGGCG
ATCCTTTGCCTCCGTGCACGTGGGCCAGCTTTTCTTCCAGGACAATACTG
GAGAGGCTCACGCCGATGTGACTCAACGGTTTGAAACCAAGGAAGCTCGT
GCGCGACAGCGCGGAAATCGGGCCGGCGTCGCGGTGGAGTCATCGTCCAT
CGCGTTTGCGCGCCACGACTGTGTTTCGAGCAAGAACGCTCGCGGCGGAG
GTGACCCTAGGCGCATAGACGTTCGCCCTGGTTCGACCGGATCGCAACCT
CAACCAAGCGGCTATATAGGCAGCGCTAGCCGTCCCGGTGAAATCAACAC
CATTTGCAGCGAGGTCCTGTCACAGCCAAAGCCCTCCGTGACGGTCTTGC
TTCCAGTGAAAAACGGCGGCGCTCGACTCGTCGATGCTGTGCAGAGCGTG
CTTACCTGCGCTCAGAGAACGCCGACAAACTGGAAGATAGAACTCCTCAT
CATCGATGACGGGTCGGAAGACGGCGCGGTCGAAGAGGCTTTAGCTACCG
TCGGTCTCAATGTTCCCTCAGGAGAGGCCGTCGGAACGGAGCGAGGGGAA
AATGAGGAAAAGGAACATGGGTCAAAGGGAACCGTAGGATCGGGGAAAAA
GTTTGGCGAGAGTGCGACTGCCGACGTCCCAACCGCTCGTCAATCTAGCT
TCGATACCGTCACCACCGCCGGCGCTGCCACTGCCACTGCGACGGTCTCC
GACAAAATAGGTGCCTCCAACGCGGACGGCACTGGCGCTTGCTTGGATAG
CGTACGCCTACCCCTTGTTGTGCGAGTCATCCGGCACGTCCGTAGTCTGG
GTGTAGCGATGAGCCTGAACGAGGGGCTGCGAGAGGCCAGGAGCGAGCTG
GTGGCGAGAATGGACGCGGACGATGTGTGCATGCCCGAGCGCCTAAAAGA
GCAGACAGAGTTTATGTACGCCAACCCCGGCGTGTCGGTGTTGGGGAGCG
CGGTGGCGACGTTCAACGGAGATTGCGTCCGCAGCGGCCAAATGCAGACC
AACATCAAGCAGGGCGCGGGTAAGCGTCAGCCGCAACGTGACGAGCAGCT
ACTAAACACGATAGTGAACCTACCGGCGGACGGAGTGCAGAGGATCGTGA
GATATCCAACCGACCGTGCCTTCCTGTCGTGGTCGCTGCTATTCGGGTGC
TGTATCGCGCACCCGTCCGTGATTCTACGCCGCGATCGAGTGATCGCTGC
TGGGGGTTACGATCCGGAAGCCGAGCCGGCGGAAGACTACGACCTTTGGC
TGCGAATGGACGGGTCTGCTCCTGGTTGCTTGGCGAACGCCGGGGAGGTC
CTCCTCGGGCTGCGCAAGCACGGCCAAAACGTTTCCCGAGTACGGCAAGA
GGAACAGCGCAAAGTGGCGCACGCAGCCGCGGTTAGGGCGATGTCTCGCC
TCCTTGATCGTGACGTGAAGGCGACTCAGGCTACGGCGGTTAGGACTCCC
GAGTTGGCCGTTAGCGTGGAGGATCTTGTGGAGGGCTCACGATTACTCTG
CGATCTGGAGGCTATCGTGATCGACCAATATCTGGGGGGCGCGGAGAACC
CGCAAAAAAGACAGGAAGTCGCCACCACCGAGGATAATTCCGCCTCCGTG
GAGAACGACGGAGATGGCCAGCGACGGTGGTCCAGAGAGCTGATCTCGAG
GGACGTAGAGGCGCGTCTCGGAGCGCTCGCGGTGCATGCGATGAAAAGCT
TTGGCGGCGGGGCGGCGCCGGTGCTCGACATATGGAGGGGGCGCTATCCT
GATCGCGCGTTGCTCCGTGTGCTTGGTGGTAAGGCGTGA
back to top