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Homology
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: D7G1I4_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I4_ECTSI) HSP 1 Score: 180 bits (457), Expect = 4.240e-49 Identity = 109/200 (54.50%), Postives = 138/200 (69.00%), Query Frame = 3
Query: 243 VVKEKTK*KAEEVLILLEVQGTEALRAQKHKEGVSLVMLIEERNRAEAVRAKADAEAILAREEA-------------EAKVLEMRGDAFAHFGNAAVVQSIVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGSHLNEDVGTISSQLPVTVEGSTRVDITKRLDHDLGDGSTTSPAQTVH-DPIKI*LRGDFAAEHLLSP 800
VV+E+TK +AEE L++L+VQGTEAL QK KEGVS MLIEE+N+AEA+RAKADA+A + +KVLE+RGD+F HFGNAA+VQSIV++LPDIARE+AAP ++T KMVF++G+ GGAGS L +DVG+I +QLP TVE T VDITK LD +G G + H DP L G AA+ P
Sbjct: 267 VVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVXXXXXXXXXXXXXSKVLELRGDSFQHFGNAAIVQSIVDRLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGSILAQLPETVEALTGVDITKGLDRMVGSGGGGTGNSNGHMDPKLAALLGAAAAKQRSQP 466
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: D7G1I5_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I5_ECTSI) HSP 1 Score: 169 bits (427), Expect = 5.310e-45 Identity = 100/170 (58.82%), Postives = 120/170 (70.59%), Query Frame = 3
Query: 243 VVKEKTK*KAEEVLILLEVQGTEALRAQKHKEGVSLVMLIEERNRAEAVRAKADAEAILAREEAEAKVL-------------EMRGDAFAHFGNAAVVQSIVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGSHLNEDVGTISSQLPVTVEGSTRVDITKRLDHDLGDG 713
VV+E+TK +AEE L++L+VQGTEAL QK KEGVS MLIEE+N+AEA+RAKADA E+RGDAF HFGNAAVVQSIV+KLPDIARE+AAP ++T KMVF++G+ GGAGS L +DVG I +QLP TVE T VDITK L+ LG G
Sbjct: 245 VVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAXXXXXXXXXXXXXXXXXXXXXXXXXXXELRGDAFQHFGNAAVVQSIVDKLPDIAREIAAPLAKTDKMVFIAGEGGGAGSRLTQDVGNILAQLPETVEALTGVDITKGLERYLGGG 414
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: A0A6H5K3X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3X4_9PHAE) HSP 1 Score: 108 bits (270), Expect = 9.350e-25 Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 3
Query: 441 KVLEMRGDAFAHFGNAAVVQSIVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGSHLNEDVGTISSQLPVTVEGST 668
+VLE+RGDAF HFGNAAVVQSIV+KLPDIARE+AAP ++T KMVF++GD GGAGS L +DVG I +QLP TV+ T
Sbjct: 97 QVLELRGDAFQHFGNAAVVQSIVDKLPDIAREIAAPLAKTDKMVFIAGDGGGAGSRLTQDVGNILAQLPETVQALT 172
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: A0A835YT26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT26_9STRA) HSP 1 Score: 107 bits (268), Expect = 2.120e-22 Identity = 79/195 (40.51%), Postives = 107/195 (54.87%), Query Frame = 3
Query: 240 QVVKEKTK*KAEEVLILLEVQGTEALRAQKHKEGVSLVMLIEERNRAEAVRAKADAEAILAREEAEAKVLEM-------------RGDAFAHFGNAAVVQSIVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGSHLNEDVGTISSQLPVTVEGSTRVDITKRLDHDLGDGSTTSPAQTVHDPIKI*LRGDFAAE 785
QVVKE+ + E LLE + EALR QK EG SL L+ + N+A+ VR KA AEA R+ R DA+A FG AA+ I++KLP+IA+ +AAP ++T KM+FVS D G AGS L D+ T+ +QL V+G T VDIT+ L L G + +PA + L GD +A+
Sbjct: 232 QVVKEQAMQRVIEAKTLLEYEDNEALRLQKKAEGESLAQLMADDNKAKGVRIKAAAEADRVRDVGXXXXXXXXXXXXXXXXXXXXRADAYAAFGQAAITSQIIDKLPEIAKAIAAPLAKTDKMIFVSSD-GAAGSKLTSDITTMMAQLGPAVQGLTGVDITQGLQR-LVSGVSGAPAAAGSKGDREGLNGDVSAD 424
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: A0A7S1DX43_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DX43_HEMAN) HSP 1 Score: 94.0 bits (232), Expect = 1.810e-17 Identity = 64/148 (43.24%), Postives = 90/148 (60.81%), Query Frame = 3
Query: 276 EVLILLEVQGTEALRAQKHKEGVSLVMLIEERNRAEAVRAKADAEA----ILAREEAEAK---------VLEMRGDAFAHFGNAAVVQSIVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGSHLNEDVGTISSQLPVTVEGSTRVDI 680
E + LE+ + R +K EG SL L+ E+N+AEAVR A A+A ++ EA AK VLE + +A+ +G+AA+VQ IV+KLP++A +A P TK+MVFVS D G A S + D+ T+ SQ+P TV+G T VDI
Sbjct: 341 EAQVHLEITDRQVERTKKEAEGQSLAELLAEKNKAEAVRVNAQAQADQIRMIGEAEAAAKQAAGAAEAHVLEQKAEAWKEYGDAALVQLIVDKLPELASAMAEPLKNTKEMVFVSND-GKAASSMTGDIATMMSQVPATVKGLTGVDI 487
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: A0A7S2S6C3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C3_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 8.970e-12 Identity = 56/169 (33.14%), Postives = 86/169 (50.89%), Query Frame = 3
Query: 243 VVKEKTK*KAEEVLILLEVQGTEALRAQKHKEGVSLVMLIEERNRAEAVRAKADAEAILAREEAEAKVLEMRG-------------DAFAHFGNAAVVQSIVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGSHLNEDVGTISSQLPVTVEGSTRVDITKRLDHDLGD 710
+V+E+TK + E I LE+ R +K EG S+ L++++N A+++ A AE DA+ H+G AA+ Q +VEKLP+IA ++ P S+T+KMVF+S D G + S L D I Q+P V+ T D+TK D+ G+
Sbjct: 277 IVRERTKQEQVEQGIKLEIADQIVERTKKEMEGASMARLLQQQNEAKSITVIAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAYKHYGQAAITQMVVEKLPEIAENISKPLSKTEKMVFISND-GNSASALTRDTVNILGQMPHMVKDLTGFDMTKMADNMSGN 444
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: A0A2R5GCP0_9STRA (Flotillin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCP0_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.780e-11 Identity = 61/159 (38.36%), Postives = 81/159 (50.94%), Query Frame = 3
Query: 243 VVKEKTK*KAEEVLILLEVQGTEALRAQKHKEGVSLVMLIEERNRAEAVRAKADAEAILAREEAEAKVLEMRGD-------------AFAHFGNAAVVQSIVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGSHLNEDVGTISSQLPVTVEGSTRVDI 680
+V+E T+ E I LE+ R +K KEG SL L+EE+N A+++ A AEA R A+ FG AAVVQ IVE+LP++A ++A P S+T+KMVFVS D G A S DV + QLP V G T D+
Sbjct: 616 IVRENTRQLQVEESIKLEIADQIVERTKKEKEGESLARLLEEQNHAKSITVIAKAEADKVRXXXXXXXXXXXXXXXXXXXXXXXXXXAYKQFGEAAVVQMIVEQLPELAAKIAEPLSKTEKMVFVSSD-GNAASGFTGDVTRMIGQLPNAVHGLTGFDM 773
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: A0A7S3LS19_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LS19_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 4.060e-11 Identity = 57/159 (35.85%), Postives = 80/159 (50.31%), Query Frame = 3
Query: 243 VVKEKTK*KAEEVLILLEVQGTEALRAQKHKEGVSLVMLIEERNRAEAVRAKADAEAILAREEAEAKVLEMRGD-------------AFAHFGNAAVVQSIVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGSHLNEDVGTISSQLPVTVEGSTRVDI 680
V++EKT+ E I L++ R +K KEG++ + + ++A+AVR A AE A+ H+G AA VQ ++EKLP+IA ++A P T+KMVFVS D G AGS L D+ + QLP VEG T DI
Sbjct: 287 VIREKTRQIEAEEKIKLDIADQTIAREKKEKEGMAFADKLAQTHKADAVRILAQAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYKHYGQAATVQMVIEKLPEIAAKMADPLKNTEKMVFVSSD-GSAGSQLTGDITRMLGQLPDVVEGLTGFDI 444
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: A0A6H5JYR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR0_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 1.950e-10 Identity = 37/54 (68.52%), Postives = 46/54 (85.19%), Query Frame = 3
Query: 243 VVKEKTK*KAEEVLILLEVQGTEALRAQKHKEGVSLVMLIEERNRAEAVRAKAD 404
VV+E+TK +AEE L++L+VQGTEAL QK KEGVS MLIEE+N+AEA+RA AD
Sbjct: 95 VVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRATAD 148
BLAST of mRNA_A-nodosum_M_contig87.21.1 vs. uniprot
Match: A0A8J4SYT6_9TREM (Flotillin n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4SYT6_9TREM) HSP 1 Score: 71.2 bits (173), Expect = 5.250e-10 Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 3
Query: 309 EALRAQKHKEGVSLVMLIEERNRAEAVRAK--ADAEAILAREEAEAKVLEMRGDAFAHFGNAAVVQSIVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGS-------HLNEDVGTISSQLPVTVEGSTRVDITKRL 692
EA R Q+ EG ++ + A+ +RA+ A+A +ILA AEA+ +++R DA+ +G AA++ I++ LP +A EVAAP SRTK++V + G CG S L D T+ +P V T VD++K +
Sbjct: 293 EAYRLQQIAEGHRQQKILLAQAEADGIRARGRANAASILAIGNAEAERMKLRADAYNKYGEAAMLSLILDSLPRVAAEVAAPLSRTKEIVIMGGSCGNGSSGTVNQLTSLGRDFATMMGTVPQAVRALTDVDLSKTI 429
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7G1I4 |
| Preferred name | FLOT2 |
| PFAMs | Band_7,Flot |
| Model size | 1042 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K07192 |
| KEGG Pathway | ko04910,map04910 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0001666,GO:0001669,GO:0001765,GO:0001931,GO:0002020,GO:0002080,GO:0002252,GO:0002376,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002791,GO:0002793,GO:0003674,GO:0005102,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005886,GO:0005901,GO:0005911,GO:0005912,GO:0005913,GO:0006582,GO:0006725,GO:0006810,GO:0006897,GO:0006950,GO:0006952,GO:0006955,GO:0007155,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008544,GO:0009506,GO:0009628,GO:0009877,GO:0009888,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010324,GO:0010468,GO:0010470,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016324,GO:0016600,GO:0018958,GO:0019222,GO:0019748,GO:0019899,GO:0022407,GO:0022409,GO:0022603,GO:0022607,GO:0022610,GO:0022622,GO:0023051,GO:0023056,GO:0030027,GO:0030054,GO:0030111,GO:0030139,GO:0030141,GO:0030155,GO:0030177,GO:0030659,GO:0030667,GO:0031090,GO:0031252,GO:0031254,GO:0031410,GO:0031579,GO:0031647,GO:0031982,GO:0032501,GO:0032502,GO:0032878,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033554,GO:0034613,GO:0035006,GO:0035010,GO:0035011,GO:0035254,GO:0035255,GO:0035592,GO:0035593,GO:0036293,GO:0036294,GO:0042221,GO:0042440,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044091,GO:0044237,GO:0044291,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044853,GO:0044860,GO:0045087,GO:0045121,GO:0045177,GO:0045184,GO:0045595,GO:0045661,GO:0045785,GO:0045995,GO:0046982,GO:0046983,GO:0048364,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0050708,GO:0050714,GO:0050789,GO:0050793,GO:0050794,GO:0050821,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051246,GO:0051248,GO:0051249,GO:0051251,GO:0051641,GO:0051704,GO:0051716,GO:0055044,GO:0060255,GO:0061024,GO:0061356,GO:0061357,GO:0065007,GO:0065008,GO:0070161,GO:0070201,GO:0070482,GO:0070727,GO:0070887,GO:0071453,GO:0071456,GO:0071692,GO:0071704,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0080090,GO:0090087,GO:0097223,GO:0097708,GO:0098588,GO:0098589,GO:0098590,GO:0098657,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0099402,GO:0099503,GO:0120025,GO:1901360,GO:1901615,GO:1902991,GO:1902992,GO:1903037,GO:1903039,GO:1903044,GO:1903530,GO:1903532,GO:1903903,GO:1903905,GO:1904086,GO:1904951,GO:1905330,GO:1990778,GO:2000026,GO:2000047,GO:2000114 |
| Exons | 5 |
| Evalue | 3.82e-35 |
| EggNOG OGs | COG2268@1|root,KOG2668@2759|Eukaryota |
| Description | protein localization to membrane raft |
| Cds size | 408 |
| COG category | U |
| BRITE | ko00000,ko00001,ko03036,ko04131,ko04147 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870263.7566943-UTR-A-nodosum_M_contig87:390254..390496 | 1680870263.7566943-UTR-A-nodosum_M_contig87:390254..390496 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig87 390255..390496 + |
| 1680870263.7742088-UTR-A-nodosum_M_contig87:390697..390808 | 1680870263.7742088-UTR-A-nodosum_M_contig87:390697..390808 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig87 390698..390808 + |
| 1680870263.8419905-UTR-A-nodosum_M_contig87:397894..398175 | 1680870263.8419905-UTR-A-nodosum_M_contig87:397894..398175 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig87 397895..398175 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870263.791794-CDS-A-nodosum_M_contig87:390808..390859 | 1680870263.791794-CDS-A-nodosum_M_contig87:390808..390859 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig87 390809..390859 + |
| 1680870263.8014743-CDS-A-nodosum_M_contig87:391505..391544 | 1680870263.8014743-CDS-A-nodosum_M_contig87:391505..391544 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig87 391506..391544 + |
| 1680870263.812578-CDS-A-nodosum_M_contig87:392238..392361 | 1680870263.812578-CDS-A-nodosum_M_contig87:392238..392361 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig87 392239..392361 + |
| 1680870263.8282304-CDS-A-nodosum_M_contig87:397699..397894 | 1680870263.8282304-CDS-A-nodosum_M_contig87:397699..397894 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig87 397700..397894 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig87.21.1 >prot_A-nodosum_M_contig87.21.1 ID=prot_A-nodosum_M_contig87.21.1|Name=mRNA_A-nodosum_M_contig87.21.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=136bp
MLIEERNRAEAVRAKADAEAILAREEAEAKVLEMRGDAFAHFGNAAVVQS IVEKLPDIAREVAAPPSRTKKMVFVSGDCGGAGSHLNEDVGTISSQLPVT VEGSTRVDITKRLDHDLGDGSTTSPAQTVHDPIKI* back to topmRNA from alignment at A-nodosum_M_contig87:390255..398175+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig87.21.1 ID=mRNA_A-nodosum_M_contig87.21.1|Name=mRNA_A-nodosum_M_contig87.21.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7921bp|location=Sequence derived from alignment at A-nodosum_M_contig87:390255..398175+ (Ascophyllum nodosum dioecious) GGCTAGCGAAATCCTGGCAGTGGCAAGATACTTGGAAGCACCTTGGCTCT
GGTAAAAGGCTTCGCGCGCAGGTTACGCGTTGGTTGAAAGCGCGATAAAA
CGCGAAGCGCCTCTTTCCCCAACGGTCAAGGGAGGAAGAGATTTCGACGA
AGACAAACACTTGTTGCTGCTGTTGTTGTTGTTGTTGTTTGATAGTACGA
AGTCCAGCAGCTTTTAGACGACCTGGCACCTGACACATACAGGTACGACT
GCGGCGGTCCCCAAATGTTCTTGTGGCCCGGTCGGCTCTTAAGAGATAAA
ATGAAAAGGAAAAAGAGGAAAACATACTGTACCGTACTTCTACCAAGCAC
GAAAGCTAAAGCATACGCTCTCGATACTCCGGCGTATGGGCGAGGGGAGC
CAGCTCAAACGAGTCGAATGATATCGACGATCGGTCGGAACAGGTGGTGA
AGGAAAAGACGAAGTAGAAAGCGGAGGAGGTGTTGATCCTTCTCGAGGTG
CAGGGGACAGAGGCTCTGCGGGCCCAGAAGCACAAAGAGGGTGTCTCTCT
CGTCATGCTGATCGAGGAGCGGAACAGGGCCGAGGCTGTCCGAGCCAAGG
CAGATGTGAGTGCTGTGGACCCCTTATTTATTTTTCGTTGATGGAAGCTT
GTTGCTATCATCGACGATGCGTCCGTTGTAAGCCGTTGGGTAGCTAGAGA
AAGCAACCCGTCGCATTTTTGGTCAGTCGGAGGCGAGATTCGAAAAATTG
CTCCACCTTAAGAGGCGCGGCAAGGCCGCAGCATCTTCACGACACGCACA
GTTTGTGAGGAAAGGAAAAGTAAGAAAGCAAAACGAGACGAAACGGAACG
TATTGAATCGAAACGAAACGAAAATACGAACCGCAACGCTTAACTAATAA
AATAGATAGTCTAATCGAGACGGAGCAGACACGAAGCGTTCCTGATTTTC
CCGCTAAACTATGGACAATAAGACCATGTCAGAGCTTTACCTGGGTACTT
TTTCACTAGAAGACTCGCCCGCGGCGGCGAGACGATCAGATCACATGATG
GACGTCAACCTATCAACCTATCAACCTACATCCGTACAAAACGATCACAT
GTAAAAATCTGTAGTCCCAAGAACAGGGCGTCGGATAAGCTAGGCCAAAG
CCAAACGTCCTGCTAGAGCGCTGCCGACTTGTAACCCTGATCCTCTTTCC
CTCAACACACACGAACGTGCCCCCACGCCCCCACGTGTCGGTTTCTCGGA
GGCCGAGGCGATCTTGGCGAGGGAAGAGGCTGAAGCTAAGGTTTGACGCG
AAGGGGTTCAGGGCATCGCATCTTTTGCTATCGCCCAGACAATTAGTAGT
TGGCGTTTACCAAACAAGGATGGATGCTTCCGCTTCATACTTGCCGCGCG
GCGGAAATATTTCTAGACGGCCCCTTCCCCCTGCGGGTTTCTCCCTCATC
GGCGAGGCCATAAGAATGATTTTATCTTGGGGTGCCAACGCTGTAGAAAA
CGAACGAGGCGGTTTTTTTCTCGCCGGAGTTTATTCGATCGTGTATCTAC
AGAGCAGGTGTATTCGCACCAACAATGACGCTGACTCTTTTTTTTAGCTC
AAACCACAAAGACGGAAAGACGGGATTAAGTCGCAGGTAGTCATTAAGAT
AGTGCGACTTTCTACGAAGTACTCTCAAATGCGAAACAAATCTTACTCGC
CTCTCTTTTTTTCTTGTTGTCACGAAAAAAGTAGTAGGAGACTACTTACT
GTAAGCAACCCGCCCCCCTTCAAAAAGTGCGCCTTACATAGTCCTCCGCC
ACCCCTTTCTCTTTCCGCTCGTTCATGTGAAGTTGTGGGTTTATACTCTT
CTATCGGCGCCAGCAGCTACGGTATCTCCATCCATGTGACCATTCCATTC
CCTCGGGTGATGTTTCCTTACTCTCACTTTTTCTGTGCCTTTTCCCCCTT
ATTCGGTTTCCTTTTTTGTCGGTTCCCTTGTCAGGTTCTCGAGATGCGAG
GTGACGCGTTCGCGCACTTCGGAAACGCCGCCGTTGTGCAAAGTATCGTC
GAGAAGCTGCCAGACATCGCGCGTGAAGTCGCCGCGCCGCCCTCAAGGAC
GAAGAAGGTTCGTGGGTGCCCTTGTTTTGTTTTAAACTTACTATTATTAT
TATTTGTGTAACTATTGTTATTAGTATAATCATAATAACGTGATAATTAT
TATTATTACTACTCGTATTTTTATTATTAGTATTATTGTAGTGGTATTGT
TATTATTAGTATTATTTATTTTTGTTGTTCTTCTTCTTCTTCTTCTTTTA
TTTATTATTAATATTTTTTATTATTTTATAATAATAATAATAATAATAAT
AATAATAATAATGATGATGATGATGATGATGATGATGATGATGATGATGA
TGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATG
ATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT
GATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGA
TGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATG
ATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT
GATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGA
TGATGATGATGATGATGATGATGATGATGATGATGATGATTATTATTATT
ATTTTATCATTATTATTATTATTATTATTATTATTATTATTATTATTATT
ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT
TATTATTATTATTATTATTATTATGATTATAATAATAATAATAATAATAA
TAATAATAATAATAATAATAATAATAATTATTATTATTATTATTATTATT
ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT
TATTATTATTATTATTATTATTATTACTACTACTTCTACTACTATTCTTC
TTCTTCTTCTTCTTCTTCCTATTATCATTATTATTATTATTATTGTTATT
ATTGTTATTATTATGATGATGATGATAATTATTATTATTATTATCATTAT
CATTATTATTATTATTATTATTATAATAATAATAATAATAATAATAATAA
TAATAATAATAATAATAATAATAATAATAATAATTATAACAATAATTATT
ATTAATATTATTATTATTATTATTATTATTATTATTGTTATTATTATTAT
TATTATTATTGTTACTACTACTTCTACTACTATTCTTCTTCTTCTTCTTC
TTCCTATTATCATTATTATTATTATTATTGTTATTATTGTTATTATTATT
ATATATATATATATATATTTTTTTAATTATAAGTATTATTACTATTTTAA
TAATTATTAGTATAAGTAGTGTTAGTATTATCTTTGTCATTATTATTATT
GTTATTATGATTATTATGATAACTACTATTATTATTATTATTATTATTAT
TTTATTACTATGAGTAGTATTAGTATTATCTTTATTTTCATCATTATCAT
CATTAACAATATATTATATAGGACTTATAATACTTCGTATATATTTACTT
TTAACTTATTATCATTATTATTGTTAAAAAAATATTATACATATTAAATT
GTAACTCAGGCTGCTTTCGCGCGACAGCCGTTGCCATGGTACTGGCGTCG
TCTGCGTATGTTGTGACGTTTCATGCGTGGTGGTACGAAGTCCGTGCCGG
GGGTTTTGTTTTGTTTTCTTGTCTGAAAGAACGCGCAGCTAGCTATATTT
CGTGTGAAAGCTCGGCTACGTGCAAAAGCGACTATGTATACAGTAGCATG
TTTTCGCTTCGGGTAGACGTAGTAGAGGGCAACCACAAAGCGGTGTACGT
GTGGCGCTGTGACGATAATTCACGTGCCTTCGAGTAAACGTGGTGGCAAC
CTCCAAAATTGCGTATCTTTACGCAAGTAAGCCTGGAAACAACAAAAGGC
ATGGGAATATAGGCTGAATGGTCTTGTGAGCATGGGATGAGGAGCGCTTA
TTTTTGCAAAAGAGTGTGTGGATCGGAGCAGCCCCGCGCAACTCTGCGGG
TCCTCTCTCTTAGAGATTTTATCTAGTAGGTTTGGTTGATTGAGGTTCGC
TGCGTGCGTTTCCTTCGTCGAACGATTGAAAATACGAGCGGGATGAGAAC
CAAGGGCATATCGCTCAAATCATTTGGATCTTTTAAAAGGACAACCGATG
GTCCAACTCATCGATTCTCTCACAAAGAGACACAACAAGTAGTACAGCTC
ACCGAGGAGACTAAATATTTGACAACACACACACACGCACACACACACAG
AGCAGATGGAGCTGGGCCAGAATAACTGGCGGAAGAGCAGTGAGTGGCAA
CGAATATCACAGGGCCCACGGTGGTCCGACAGGGGATGAGGGTCGTGGGA
GTACCAGTTGGAACAGAACAGTTACCAGCGCGATTTCTTACAGGAGGCGG
TTAATGGAGAGCAAGATGAGGTCATGGGGGCGCTGGTCCCGATGAAGGAT
GCCCAAGCGAGCTTTCAGATTTTGCGTCTATCTGTCACTTCTCGCGTCTC
ACATCTGCTTCGAACAGTCCCGCCCTCCATCACATGGCAAGCTGCTGCAA
ATTACGACGCTTTGGTGGAGTGGGTGTTGGCGTCTATCATAGCTGGTGAC
GGAGCTGCCGCGGCAGGGCTACCAACGCCAGAGAAAGTAGCCCACGATCC
CACTGTGTGCCATAAAAAGGCCTACCTGGGACACGAGGCCCTACGGCAGG
CCCACCTGCTAATCCAAGAAGGCGACCTTGGGCGTACCAGCAGCAGCTCT
ATGAAAGGCGCGGCATATATAAGCTGCCACGCCCTGGCCCTGGGGCGTGT
CGTCACTGCCTCCGCCCACGGGAACCTTCCACCCCTTCTTGAACGGCTGC
CTGAGCGACCCATGACGTCAGTGCTCATTGAAGAGCTGAAGACCGTGCCC
ACCGAAGCCAAGAAAAGCCAAATAGAGGATGCAGTGGGCAGTTCGTGGGC
AGTTCTAGCGACGGAAGAGAACCCAAGGGAGAGGGATAGGAACTCTACCG
GTCGAAGCGGGAGCAGGAGGAAGGGGGGGGGGAGGTGTTGGACAGCGAGA
ACAACGGGAGGATCCGTTGGCATCCGAGTCCGATGGGGAGATTGAGCTAG
GCCAGACCAACCGAGGGGTCGGAGGAGTGTGCGTGGGAGTTGTACCTCGC
GTCCAATCAAAGCTCTCGCGCGCCCTCCACGCACACCGTGGGAAGAAGCT
CCTGCAAGATGTCCAAACCCAGGAAAGTGCGCCAATGAAAAAAGCTATGG
TAAGGTTCAGGGGAGCGCGGCAGAAGGGCGCCATGGCATTTGTGGAATGC
CTAGAGGTGTCGCAAGAAGACACAATGGAGGGCCCCCTGGGGAGGAAAAC
CTTAGGCAGGAGCCTGGGGTCGCGTGACGCGGCGTAACTCGTTGATGAGA
TGTGTCATGGCAACGGTTGCCGGCAAGAAACTCCCGCCTCCACGCCATAT
CTTGCACAAAGACGGGACAGAGCTCTCTCACCCACAATCGAGTGCTCCAC
CAGACACTGGCTCGATCCCTTCGCGAGAGTAAAGCCCAGTTTGTTGTTGA
AGATACATGGCCCTTCCGAGAGAGAGCCAGCGGACACAACGGCAGACTGA
ACCCGTTACGTATGGACATCACAACGGAGGCGAAGGCACTCTTTGGCAAC
CACCCTCGACTCAAGAATAAGGTACTTCTACTCGACATTACCATCGTCAA
CCCTTGCGCCGGCTCCAATCCGGGGAATGCAGCACGCCATTTAGGAAAAC
ACCTCGCCGGCGCAGTCGAGTGGAAGAAAAACAAATACCGGGGCTCGTTC
CCCGCTACCTACTCCCTCCTTCCTCTCGCTATGTCGACATGTGGTGAGGT
TGACTCAGACGTGCATGCCCTCATGAAGGAGCTCGCCATCAGCCGGGTAG
AGCACAGGTCGGAGACACATTTCAACGAGTCCTAACATCTGGCGGAAGGG
ACGGAAGTAGCACGTTTTCAGCGGCGATTCTCTTTTGTTTTATAGCAGGC
ACTTTCATTCCGCACGCGTCACCACCTCTGCAGACAGGGGATGACACTTG
CGAGCACCCGACAGTTCCGTTCGCAAGGACCGGAGTCTGCACAAGCTCAT
CGTACTGAGGGGGTAACCGGGTCAGGGGGACAGGAAGGAGCGAACGGGGT
CGGGGGCGGGATTCGAGTTGGGGGCGGGAACGGAGACGGTAACGGGGTCG
GGGGTGGGAACGGGGATGTGAACGGTCATGGAGACGGGGACAGAGCGGGA
GCGGGAGCGGGAACGGGGGTGGAGATGAACGAAGGAGCGCAGGATAGGAA
CGGGGACGGGAGCGGGGACGGGGCGGGGACGGGGACGGGGGTGGAGACCC
ATAGACGAACACCGGATGGGAACGGGGACGGAAGCGAAGACAGTGATAGC
GGAGATGGGAACGGGGACGAGGATAACGGGAACGAGGATAGGATCGGGGA
GGGCGGAAGAGAGGCGAAGAAGCGCAAGAAACCGCAAAATAGTTGTAGAC
GCCAAGTGGGAAACGGGGAAGACTTGAGTGGAAAGAGAAAAAAATGTAGA
AATGAAAGGGTTGGTGCAGTAGACGCTAACTCAGATAATCTAGAGAGCAA
CAAGGAAGCAGAGGGGAGAGCACAAGGTACTCTGGGCTCAAGTAAGAATT
GTACAAGGAGAGAGAGTGTGTCCCCTCTGTCGCGTCTGATCAGAGGTTTT
CGTTATAAGTATCATTGATCTCCCCTTGGGAAAATCAATGCGAGTGGCAT
TGAATGACCAGGATGGCAGGGCCAGATTGCGCGGTTATGTGGACTTTAAT
AAATACACACACACACACACACACACACACACACACACACCTCTTGTCGA
GTTTGATCGGAGGTTTTCGTAACAAGTATCATTGATTCCCCCTTGGGAGG
ATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGCG
GTTATGTGCAATTTAATAAATACACACACACACACACTATGTGCAATTTA
ATAAATACACACACACACACACACATACACTCAATGCGAGTGGCATTGAA
TGACCAGGATGACAGGGCCGGATTGCGCGGTTATGTGCACTTTAATAAAT
ACACACACATTCATGCAATATATAGCATCGGTTCGGAATGAACGAATTCA
AGCTCATAATCAAAGTACTTTCCGCTCGACTGGGAATGAGTCTTCTCGGG
CATCTCCCTCCACACGTACACCCTTTACACTCAACAAACGAAACGTCTGT
CGCCCTCCCCTCCTTCCCTCGACGACCCCGGTGGCGCGCGCACAGATGGT
GTTCGTGTCCGGAGATTGTGGGGGCGCCGGAAGCCACCTCAACGAAGACG
TTGGCACCATCTCCTCCCAGCTACCCGTGACGGTGGAGGGCTCCACGAGG
GTGGACATCACCAAACGGCTGGATCACGACCTCGGAGACGGCTCCACGAC
CTCCCCCGCCCAGACGGTCCACGACCCGATAAAGATATGATTGCGTGGCG
ACTTCGCGGCCGAGCACCTTCTCTCTCCGCGACATACATCGGGAGAGCTT
AGATATATGGGGGTAGGGTATAGTAGAGGAGTTAGGGTTGTAAACGCGGC
CGCAGCTCATGAGGTGCAGTGCAGGACTCCCGCACGCTAGCGGTCAGGAA
GAGTTAGTGCGTCCAGTTGTTACGTGTAAGGCGCCAGCGCGGCAATGGGG
ATCGCTCCAGGGTGGTGGGGTGTTACGTCGCGAAGGGAAACACGATGGGC
CTTCGTGCACTTGTTGCTTCG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig87:390255..398175+ >mRNA_A-nodosum_M_contig87.21.1 ID=mRNA_A-nodosum_M_contig87.21.1|Name=mRNA_A-nodosum_M_contig87.21.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=408bp|location=Sequence derived from alignment at A-nodosum_M_contig87:390255..398175+ (Ascophyllum nodosum dioecious) ATGCTGATCGAGGAGCGGAACAGGGCCGAGGCTGTCCGAGCCAAGGCAGA TGCCGAGGCGATCTTGGCGAGGGAAGAGGCTGAAGCTAAGGTTCTCGAGA TGCGAGGTGACGCGTTCGCGCACTTCGGAAACGCCGCCGTTGTGCAAAGT ATCGTCGAGAAGCTGCCAGACATCGCGCGTGAAGTCGCCGCGCCGCCCTC AAGGACGAAGAAGATGGTGTTCGTGTCCGGAGATTGTGGGGGCGCCGGAA GCCACCTCAACGAAGACGTTGGCACCATCTCCTCCCAGCTACCCGTGACG GTGGAGGGCTCCACGAGGGTGGACATCACCAAACGGCTGGATCACGACCT CGGAGACGGCTCCACGACCTCCCCCGCCCAGACGGTCCACGACCCGATAA AGATATGA back to top
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