mRNA_A-nodosum_M_contig865.42.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig865.42.2
Unique NamemRNA_A-nodosum_M_contig865.42.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: A0A7S2WV09_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV09_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.920e-110
Identity = 188/328 (57.32%), Postives = 247/328 (75.30%), Query Frame = 1
Query:  436 GVGARSSGFYGSEDMSALKEIFSLYDIDKKGTVAINDLEGILQKVGHSSDAVKRITAAAAATDEAGMEARISFDDFIRLLEQAGPTDPLDGPDPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELLEWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEATFRGQQQSELQALLKRINARRKEHLKQRNLDSKRLLXXXXXXXXXXXXXXXXEGIKLTEEIKK 1419
            G GA S   Y +E++ ALK IF+LYD DK G++  ++LE +L+K+G++ D+ + I AA+           ++F++F++L+E+  P  P +GPDPKV+EFLRILEEYRLKCE+ GDYLEAGRA  QL+ LRRQE +RQQ+AVRARQ+ ER DVQ+AH MQY+DFN AW +YLEEYD+MAQ+Y QQMTERH  +L+++Q+ LQ ++ +KPPKWS+ELLEWRRRQH+LARQKNYAEAQ++KK AD+LE+ ER    ++  I  ARKEA FR QQQ+ELQALLKRI+ARRKEH+KQRNLDSKRL+                E  ++  EI+K
Sbjct:   12 GAGADS---YTAEEIHALKGIFALYDPDKTGSIPASELESLLEKIGYTGDSKQDILAASKELSN------VTFEEFLQLIEKGQPQQPGEGPDPKVMEFLRILEEYRLKCEDEGDYLEAGRAQEQLETLRRQEEKRQQKAVRARQIAERSDVQIAHNMQYQDFNKAWDRYLEEYDKMAQMYIQQMTERHAVNLLDFQRNLQSQMAEKPPKWSRELLEWRRRQHMLARQKNYAEAQRIKKIADKLEDKERKGVEQDTAIIFARKEAQFRQQQQAELQALLKRIDARRKEHIKQRNLDSKRLMQRNRNVQAVLESKQAVESNRIFSEIRK 330          
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: A0A7S2GCP4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCP4_9STRA)

HSP 1 Score: 337 bits (864), Expect = 3.030e-106
Identity = 180/292 (61.64%), Postives = 234/292 (80.14%), Query Frame = 1
Query:  463 YGSEDMSALKEIFSLYDIDKKGTVAINDLEGILQKVGHSSDAVKRITAAAAATDEAGMEARISFDDFIRLLEQAGPTDPLDGPDPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELLEWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEATFRGQQQSELQALLKRINARRKEHLKQRNLDSKRLL 1338
            Y +++++AL+ IF+LYD +K G+++  +LE +L+K+G++ D+   I  AA      GME+ +SFDDF+ LLE+  P+ P + PDPKV+EFLRILEEYR+KCEE G+YLEAGRA  QLD LR+QE +RQQ+AVRARQ+ ER DVQ+AH MQY DFN AW +YLEEYD+MAQ+Y QQMTERH  +L+++Q+ LQ E+ ++PPKWS+ELLEWRRRQH+LARQKNYAEAQK+K  AD+LE  E+    ++     ARKEA FR QQQ+ELQALLKRI+ARRKEH+KQRNLDSKRL+
Sbjct:   10 YSADEINALRGIFALYDPEKSGSISAAELESLLEKIGYTGDSKVDILDAAQ-----GMES-VSFDDFLDLLEKGQPSQPGEAPDPKVMEFLRILEEYRIKCEEEGNYLEAGRAHEQLDTLRKQEEKRQQKAVRARQISERSDVQIAHNMQYSDFNAAWDRYLEEYDKMAQMYIQQMTERHAVNLLDFQRALQTEMTERPPKWSRELLEWRRRQHMLARQKNYAEAQKIKIIADKLENKEKAALEQSTASLFARKEAQFRQQQQAELQALLKRIDARRKEHIKQRNLDSKRLM 295          
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: A0A6V1W3Y9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W3Y9_HETAK)

HSP 1 Score: 323 bits (828), Expect = 7.840e-101
Identity = 182/324 (56.17%), Postives = 229/324 (70.68%), Query Frame = 1
Query:  463 YGSEDMSALKEIFSLYDIDKKGTVAINDLEGILQKVGHSSDAVKRITAAAAATDEAGMEARISFDDFIRLL---EQAGPTDPLD--GPDPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELLEWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEATFRGQQQSELQALLKRINARRKEHLKQRNLDSKRLLXXXXXXXXXXXXXXXXEGIKLTEEIKK 1419
            +  E+++AL  IF+LYD D  G + + +LE I  K+G + D    +            + +ISFD+F+ LL   + AG  DP    GPD KV+EFLRILEEYRLKCEE GDYLEAGRA RQL +L+ QE +RQQ+ +RARQ+ ER+DVQ+AH MQY DFN AW KY+EEYD MAQ+Y QQMTERH  +L+E+Q+ LQQE+RD+PPKW +ELLEWRRRQH++ARQKNYAEAQK+KK AD++EE ER    ++     ARKEA FR QQQ+ELQALLKRI+ARRKEH+KQR +DSKRLL                E  +L  E+KK
Sbjct:   16 FSREEINALHGIFALYDADNSGYIQVEELENIFTKIGKNPDEAAALLQEVDNRAGGERDGQISFDEFVDLLALQKAAGDGDPNSDGGPDQKVLEFLRILEEYRLKCEEEGDYLEAGRANRQLGLLKAQEEKRQQKTIRARQVAERQDVQIAHNMQYNDFNAAWDKYMEEYDGMAQMYIQQMTERHAVNLLEFQQGLQQEMRDRPPKWGRELLEWRRRQHLMARQKNYAEAQKIKKIADQMEERERQAMQQSNAAVFARKEAKFRQQQQAELQALLKRIDARRKEHVKQRAVDSKRLLQRNRNVQAVLESKQNVECNRLFAEVKK 339          
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: A0A7S4EBY1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBY1_9STRA)

HSP 1 Score: 317 bits (811), Expect = 1.140e-98
Identity = 172/292 (58.90%), Postives = 221/292 (75.68%), Query Frame = 1
Query:  463 YGSEDMSALKEIFSLYDIDKKGTVAINDLEGILQKVGHSSDAVKRITAAAAATDEAGMEARISFDDFIRLLEQAGPTDPLDGPDPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELLEWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEATFRGQQQSELQALLKRINARRKEHLKQRNLDSKRLL 1338
            Y  E++SAL+ IF+LYD D  G ++  DLE +LQK+G   +A + +      T+       + F  F+ L++   P  P + PDPKV+EFLRILE+YR KCE+ G+YLEA RA +QL++LR+QE +RQQ+AVRARQ+ ER+DVQ+AH MQY DFN +W KYL EYDRMAQ+Y QQMTERH  +L+E+Q+KLQ E+ ++PPKWS+ELLEWRRRQH+LARQKNYAEAQ++KK AD+LE+ ER       G   +RK+  FR QQQ+ELQALLKRI+ARRKEHLKQR LDSKRLL
Sbjct:   38 YSKEEISALRGIFALYDPDGTGEISSADLESLLQKIGLKQEAARELIERFDVTEPT----TVDFAKFLELVKAGQPDQPGEEPDPKVLEFLRILEQYRRKCEKEGNYLEADRAHQQLEMLRKQEEKRQQKAVRARQIAERQDVQIAHNMQYTDFNASWDKYLAEYDRMAQIYIQQMTERHATNLLEFQRKLQSEMAERPPKWSRELLEWRRRQHMLARQKNYAEAQRIKKIADKLEDKERKSCENMSGGAFSRKDGQFRNQQQAELQALLKRIDARRKEHLKQRTLDSKRLL 325          
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: A0A7S2XWE0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE0_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.250e-96
Identity = 178/305 (58.36%), Postives = 222/305 (72.79%), Query Frame = 1
Query:  544 DLEGILQKVGHSSDAVKRITAAA--AATDEAGME----ARISFDDFIRLLE-----QAGPTDPLDGP--DPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELLEWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEATFRGQQQSELQALLKRINARRKEHLKQRNLDSKRLLXXXXXXXXXXXXXXXXEGIKLTEEIKK 1419
            +LE ILQK+GH  ++   +  AA    T   G +     RISF++F+ LLE     + G      G   DPKV+EFLRILEEYR+KCEE GDYLEAGRA +QL VL++QE RRQQ+AVRARQ+ ER+DVQ+AH MQY DFN AW KY+EEYD MAQ+Y QQMTERH  +L+E+Q++LQQE++++PPKWS+ELLEWRRRQH+LARQKNYAEAQKVKK AD++E+ ER    +      ARKEA FR QQQ+ELQALLKRI+ARRKEH+KQRN+DSKRLL                E  ++ ++IKK
Sbjct:    1 ELESILQKIGHDPESAASLMQAADGVVTQSRGSQQEADGRISFEEFLMLLELRDQKEGGGIGGSSGEVTDPKVMEFLRILEEYRVKCEEEGDYLEAGRANKQLQVLKKQEERRQQKAVRARQVAERQDVQIAHNMQYSDFNTAWDKYMEEYDSMAQMYIQQMTERHAVNLLEFQRRLQQEMQERPPKWSRELLEWRRRQHMLARQKNYAEAQKVKKVADQMEDRERQAMQQQNAAVFARKEAKFRAQQQAELQALLKRIDARRKEHIKQRNIDSKRLLQRNRNVQAVLESKQTVECNRVYQDIKK 305          
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: D8LIF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF8_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 1.660e-95
Identity = 158/207 (76.33%), Postives = 181/207 (87.44%), Query Frame = 1
Query:  457 GFYGSEDMSALKEIFSLYDIDKKGTVAINDLEGILQKVGHSSDAVKRITAAAAATDEAGMEARISFDDFIRLLEQAGPTDPLDGPDPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKE 1077
            G YG E++SALK IF+LYD +  GT+ + +LEGILQKVGH+ D V R+ AAAA TD AGM+ R+SFD FIRLLEQAGP  PL+GPDPKV+EFLRILEEYR+KCEEGGDYLEAGRA RQLDVLRRQETRRQQ+AVRARQL ER+DVQ+AH MQ++DFN AW+KYLEEYDRMAQ+Y QQMTERH   LME+Q+KLQQELRDKPPKWSKE
Sbjct:   55 GVYGREEVSALKGIFNLYDAENTGTIGVKELEGILQKVGHNPDDVARVMAAAANTD-AGMDGRVSFDQFIRLLEQAGPAGPLEGPDPKVMEFLRILEEYRVKCEEGGDYLEAGRAQRQLDVLRRQETRRQQKAVRARQLCERQDVQVAHNMQFQDFNAAWNKYLEEYDRMAQMYVQQMTERHAIGLMEHQRKLQQELRDKPPKWSKE 260          
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: A0A7S3HQS7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQS7_9STRA)

HSP 1 Score: 303 bits (775), Expect = 3.650e-91
Identity = 175/323 (54.18%), Postives = 224/323 (69.35%), Query Frame = 1
Query:  463 YGSEDMSALKEIFSLYDIDKKGTVAINDLEGILQKVGHSSDAVKRITAAAA--ATDEAGMEARISFDDFIRLLEQAGPTD--PLDGPDPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELLEWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEATFRGQQQSELQALLKRINARRKEHLKQRNLDSKRLLXXXXXXXXXXXXXXXXEGIKLTEEIKK 1419
            Y +E++S ++ +F   D D+ G + IN L G+L K+G   D + R+T  A+  A D  GM   + FDD + LL+    +   P +G DPKV+EFL+ILEEYR+KCEE G+YLEA RA RQL VLR+QE +RQQ+A+ ARQ+ E++DVQLAH MQ+ +FN +W KYLE+YD MAQ Y QQMTERH   L+E+QK+L+++L DKPPKWSKELL+ RR+QHI AR KNY  AQK+KK +D+ EE ER    +   +  AR+EA FR QQQ+ELQALLKRI  RRKEHLKQRNLD+KRLL                E  KL  EIKK
Sbjct:   11 YSAEEISVIRTVFDSCDGDRVGRIHINQLSGLLMKLGKDDDEIVRLTETASKVADDNQGM---LQFDDVLYLLQSVEKSYELPFEGSDPKVLEFLQILEEYRVKCEEEGNYLEAARAYRQLGVLRKQEEKRQQKAITARQISEKQDVQLAHNMQFNEFNKSWDKYLEDYDSMAQTYIQQMTERHAVVLLEFQKQLRKDLADKPPKWSKELLDQRRKQHINARNKNYTLAQKLKKQSDKTEERERRELEQAQAVIFARREAKFRMQQQTELQALLKRIECRRKEHLKQRNLDTKRLLQRNRNVQAVLESKQATECQKLFAEIKK 330          
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: A0A812YQH7_SYMMI (Aste57867_22357 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YQH7_SYMMI)

HSP 1 Score: 280 bits (716), Expect = 2.150e-86
Identity = 150/233 (64.38%), Postives = 186/233 (79.83%), Query Frame = 1
Query:  646 ISFDDFIRLLE--QAGPTDPLDGPDPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELLEWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEATFRGQQQSELQALLKRINARRKEHLKQRNLDSKRLL 1338
            +S+D F+ +++  ++      +GPDPKVVEF+RILEEYR+KCEE G+YLEAGRA +QLD+LR QE +RQQ+A++ RQ+ ER+DVQLAH MQ+ +FN AW KY+EEYD MAQ+Y QQMTERH   L+EYQK+L+ EL  KPPKWSKELLEWRRRQHILAR K Y EAQK+K+ ADR E+ E+    +   I  AR+EA +R QQQ+ELQALL RI ARRKEH+KQRNLDSKRLL
Sbjct:    2 VSYDQFLSVIKSLESNAAAVAEGPDPKVVEFMRILEEYRVKCEEEGNYLEAGRAHKQLDILRVQEEKRQQKAIKVRQITERQDVQLAHNMQFSEFNAAWDKYMEEYDNMAQVYIQQMTERHAIVLLEYQKQLRAELAGKPPKWSKELLEWRRRQHILARGKKYTEAQKLKRIADRAEQKEKEEMEQGQAINFARREAKYRQQQQAELQALLTRIEARRKEHIKQRNLDSKRLL 234          
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: A0A7S1C3U0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3U0_9STRA)

HSP 1 Score: 282 bits (722), Expect = 2.090e-85
Identity = 171/347 (49.28%), Postives = 230/347 (66.28%), Query Frame = 1
Query:  406 SETCDQAPETGVGARSSGFYGS----EDMSALKEIFSLYDIDKKGTVAINDLEGILQKVGHS-SDAVKRITAAAAATDEAGMEARISFDDFIRLLEQAGPTDPLDGPDPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELLEWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEATFRGQQQSELQALLKRINARRKEHLKQRNLDSKRLLXXXXXXXXXXXXXXXXEGIKLTEEIKKARAP 1431
            S+T +   E G   R  G  GS    E+++AL+ IF  +D D  G ++  ++E +++K+G   +DA + +       D +G    I+FD+F+ L+ QA    P +  DPKV+EFLRIL+EYRLKCE  G+YLEAGRA  QL+ LR+QE +RQ +A++ARQL ER DVQ+AH MQY +FN+AW KY+EEYDRMAQ+Y QQM+ERH   L E+Q+KL +EL  +PPK+S+ELL+WR+RQ +LA+QK YAEAQK+K+ AD +E  ER    +       ++E+ FR QQQSEL ALLKRI+ RRKEHLKQR LDSKRLL                E  +   +IK A AP
Sbjct:    2 SKTEEDFGEPGSPPRGPGGDGSAATDEELAALRSIFDQFDTDGGGAISTAEMEAVMEKLGRDPADAAELLRDVD--PDRSGT---ITFDEFVGLVNQARDAPPGEAADPKVLEFLRILDEYRLKCESEGNYLEAGRAAGQLETLRKQEEKRQHKALKARQLAERHDVQIAHNMQYAEFNEAWDKYMEEYDRMAQMYIQQMSERHAVKLREFQEKLHEELTKRPPKFSRELLDWRQRQLMLAKQKKYAEAQKIKRIADEMERRERAKLDDERLTIFQQRESKFRSQQQSELAALLKRIDGRRKEHLKQRALDSKRLLQRNRNVQAVLESKQSVEAGRKKADIKAALAP 343          
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Match: A0A6A4DEK9_9STRA (EF-hand domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A4DEK9_9STRA)

HSP 1 Score: 281 bits (720), Expect = 7.830e-85
Identity = 170/346 (49.13%), Postives = 219/346 (63.29%), Query Frame = 1
Query:  469 SEDMSALKEIFSLYDIDKKGTVAINDLEGILQKVGH--SSDAVKRITAAAAATDEAGMEARISFDDFIRLLEQ------------------AGPTDPLDGPDPKVVEFLRILEEYRLKCEEGGDYLEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDAWSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELLEWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEATFRGQQQSELQALLKRINARRKEHLKQRNLDSKRLLXXXXXXXXXXXXXXXXEGIKLTEEIKKARAPDYYSP 1446
            +E++ AL+ +F++YD D  G +    +  IL K+G   S + +  +       D AG    ISFDDF+ L++                    G      GPDPKV+EF+ ILEEYRLKCEE G+YLEA RA  QL  LRRQE +RQ ++++ARQ+ ER+DVQ+AH MQ+ DFN AW +Y+EEYDRMAQ Y +QMTE+H A L  +Q KLQQE+ ++PPK+SKEL+EWRRRQH LA+QK+YAEAQK+K+ AD +E  ER    E      ARKEA  R QQQ+EL ALLKRI+ RRKEHLKQRNLDSKRLL                E  K  ++IK +  P   +P
Sbjct:   11 AEELGALRAVFNVYDEDGSGCIPTEHIPEILDKLGRDASEELLNELD------DCAGDSGIISFDDFVSLIQNHVLRQQELEQELAGGGAGVGGDRLRPGPDPKVMEFIAILEEYRLKCEEDGNYLEAQRADSQLTALRRQEFKRQSKSLKARQIAERQDVQIAHNMQFNDFNQAWDQYMEEYDRMAQAYVKQMTEKHAADLAAFQDKLQQEILERPPKFSKELIEWRRRQHRLAQQKSYAEAQKIKQIADEVEADERAKMSEELRAVFARKEAKLRQQQQAELAALLKRIDGRRKEHLKQRNLDSKRLLQRNRNVQSVLESKQVTEATKKIQDIKMSLMPKERAP 350          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig865.42.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2WV09_9STRA1.920e-11057.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GCP4_9STRA3.030e-10661.64Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6V1W3Y9_HETAK7.840e-10156.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4EBY1_9STRA1.140e-9858.90Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2XWE0_9STRA1.250e-9658.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LIF8_ECTSI1.660e-9576.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3HQS7_9STRA3.650e-9154.18Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A812YQH7_SYMMI2.150e-8664.38Aste57867_22357 protein (Fragment) n=1 Tax=Symbiod... [more]
A0A7S1C3U0_9STRA2.090e-8549.28Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6A4DEK9_9STRA7.830e-8549.13EF-hand domain-containing protein n=11 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig865contigA-nodosum_M_contig865:264821..270844 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIF8
Model size2069
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue5.6e-99
EggNOG OGs2CNBR@1|root,2QV22@2759|Eukaryota
Cds size1410
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig865.42.2prot_A-nodosum_M_contig865.42.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig865 265154..270518 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870255.3143988-UTR-A-nodosum_M_contig865:264820..2651531680870255.3143988-UTR-A-nodosum_M_contig865:264820..265153Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig865 264821..265153 +
1680870255.4285076-UTR-A-nodosum_M_contig865:270518..2708441680870255.4285076-UTR-A-nodosum_M_contig865:270518..270844Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig865 270519..270844 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870255.3263807-CDS-A-nodosum_M_contig865:265153..2654031680870255.3263807-CDS-A-nodosum_M_contig865:265153..265403Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig865 265154..265403 +
1680870255.3370578-CDS-A-nodosum_M_contig865:265892..2660291680870255.3370578-CDS-A-nodosum_M_contig865:265892..266029Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig865 265893..266029 +
1680870255.356673-CDS-A-nodosum_M_contig865:266600..2667741680870255.356673-CDS-A-nodosum_M_contig865:266600..266774Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig865 266601..266774 +
1680870255.3688595-CDS-A-nodosum_M_contig865:267618..2677981680870255.3688595-CDS-A-nodosum_M_contig865:267618..267798Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig865 267619..267798 +
1680870255.3834631-CDS-A-nodosum_M_contig865:268337..2684061680870255.3834631-CDS-A-nodosum_M_contig865:268337..268406Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig865 268338..268406 +
1680870255.3962896-CDS-A-nodosum_M_contig865:268783..2688911680870255.3962896-CDS-A-nodosum_M_contig865:268783..268891Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig865 268784..268891 +
1680870255.4065197-CDS-A-nodosum_M_contig865:269677..2698871680870255.4065197-CDS-A-nodosum_M_contig865:269677..269887Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig865 269678..269887 +
1680870255.4167874-CDS-A-nodosum_M_contig865:270236..2705181680870255.4167874-CDS-A-nodosum_M_contig865:270236..270518Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig865 270237..270518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig865.42.2

>prot_A-nodosum_M_contig865.42.2 ID=prot_A-nodosum_M_contig865.42.2|Name=mRNA_A-nodosum_M_contig865.42.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=470bp
MEASNERRDVAGEDGDAGKGMGSSSETCDQAPETGVGARSSGFYGSEDMS
ALKEIFSLYDIDKKGTVAINDLEGILQKVGHSSDAVKRITAAAAATDEAG
MEARISFDDFIRLLEQAGPTDPLDGPDPKVVEFLRILEEYRLKCEEGGDY
LEAGRALRQLDVLRRQETRRQQRAVRARQLYERRDVQLAHYMQYKDFNDA
WSKYLEEYDRMAQLYTQQMTERHTASLMEYQKKLQQELRDKPPKWSKELL
EWRRRQHILARQKNYAEAQKVKKNADRLEESERNVKMENWGIYLARKEAT
FRGQQQSELQALLKRINARRKEHLKQRNLDSKRLLQRNRNVQNVLESKQN
VEGIKLTEEIKKARAPDYYSPHIYKRSVMSAMPGGMVSTPPDPSQKIPPE
ARGRVRRKKKISGAASSLGFSPTAASATSAEAEGMEKYLEEDSCKDQTFV
TNKGYQEEDTLSVKRQQIA*
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mRNA from alignment at A-nodosum_M_contig865:264821..270844+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig865.42.2 ID=mRNA_A-nodosum_M_contig865.42.2|Name=mRNA_A-nodosum_M_contig865.42.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6024bp|location=Sequence derived from alignment at A-nodosum_M_contig865:264821..270844+ (Ascophyllum nodosum dioecious)
CTCTACATAGAGTACACACATACAGTATCTTGTATCGTACCACTACCAAA ACTAGGGTTATTCACTTCGAAGCACATTAAAAGACACATGACTGCGCCAC GACTGGGAGCAGGCCTAATCGCAGTCCTTGACGGAGACGAGCCGTCCAAT CATGATCTTCGATACCGTTCTTACCTGACCTAGCTAGCGCAAGTTCAGCG GCGAGCTTTTATCACGGTCGACTTACCGTCGTGCGTATTATCGTTCGCGT TGAGGTAATGCAGCTGTCTGTCTTGACTCCGAATTGCTGCTAAAAGTAGG CGAGTTGCAAGTTGCCAAGCGTTACCCGCAATCATGGAGGCGTCAAATGA GCGCCGTGACGTCGCTGGGGAGGATGGAGATGCGGGAAAAGGGATGGGTA GCTCTAGTGAAACGTGTGACCAAGCTCCGGAAACTGGCGTCGGAGCTCGA AGTAGTGGTTTTTACGGGAGTGAGGATATGTCCGCCCTCAAGGAGATCTT CAGTCTCTACGACATCGACAAAAAGGGAACGGTAGCAATCAACGACCTCG AGGGGATCCTTCAGAAAGTGGGACACAGTTCTGGTAAGATTAACTTATAA TGGTAGATACTTCTTAGGCGTGTAAATGTAATCCCTGACCGCGCTTTCAA AATAAGTCGCAGAATATGTATTGAAGGATCTAGAAGTAATGTGCAACAAG AACACGATGTAGTAGACTACAATAATAGATACGAGTACAAGCACTCCATG GCTGGAAGTAAGATTTGAGCCTAGGTCGCTGCTGCTGCTGCAGTACTGGT GTGCAGTAGATTCAAGTAGTTATAGGCTAGAAGTGAGAATTAGGCCGATT TCCGATGTAGTACTCGTACAAGTAATTGTACTGGTAGTGCACCTGGTTGG TTCTCACTCAATATACGGTTAGACGAGAGGAGCTACTACTTTATATGGAG AGACGCACGACGTGACCCTTCTACTGCCTAAACCATTAGACGACAGGTCG TGTTCTTCTGACTTGATCGCTAAAAATCACACATCGCCGGGCTGATGCCT ATGTTGTGCGCGGGTACAACAGATGCTGTCAAGAGAATCACGGCCGCGGC AGCTGCTACTGACGAGGCAGGAATGGAAGCTCGGATATCTTTCGACGACT TTATTCGCCTCTTGGAGCAAGCAGGGCCCACGGACCCGTTAGACGGACCG GACCCGAAGGTGACAAGAGGAATTGCCGAAGGCAGACAACCGAGCGCTGC GAGGGCGTCTGGCCGTTTTCGTTTGGTTGGTCTAATCGAGGTTTTGGTTT ACCTACCTCTTTGTTACCTGGTACTTGGTATTCTCACCATTCTCACCAAG GCATACGAGTGTGTAAGTATTGTAAGTGTGGTAGACTGTACGGTCGAGGT TCACGCTGTAAGGTCATAAACGTCCGAGCAGAACGTGTCGACCGTTTCTC CGCGAAGATGGAGGTTGATGATGTTTCCTTCAATCTCTCCTACGGAGGGC ACGAAACTGGAGAGAAACTAACAATATACACCACAGTTTCTCTATATTAA ACACACTAGCGTTGCACAGGCCATTTTACCCAATATGCTCGTCGTGGGTG GTGGCATATAACAAAGTCCATTATTGGCTTACGACGAAGTCCATTTTATG CGGTTCGCTGGGGATAGTTTTTGTTTTGTTATAGATGTATGTACTTTTAA GTAGACATCATCGCTCCAAGCTCCACCCCCCTCCCGCTCCGGGTCTGCCT GTACGGATCAACAACCAAAACGCTCTCAAGGTAGTAGAATTCCTCCGCAT CTTGGAGGAGTACCGCTTGAAGTGCGAGGAAGGCGGGGATTATCTTGAGG CGGGTCGGGCGCTACGACAGCTGGACGTACTCCGCAGGCAGGAAACTCGG AGGCAGCAGAGGGCAGTGCGGGCAAGGCAACTTTACGAGCGAAGGGACGT TCAGGTGGGGTATGCGCAGGAGCATTATACGGCATGGCCATTTTGCGTGA TAAGGTTCTAGAGCCTATGTATGAAAACGGGTCAGCCGTTCTAGCGCTCT TAGACCCAGGGTGCTGGGAATGAGGGGTCACCATACGATAGGCGCTACCT TGACTAAATCAGGGGAAGGTGTTGGATCTCGGGACTGGGTCATCTGATGA GCACATTTTGTGTGTTGCTGTACTTCTAGCAGCTAGAAGAGAAATCCGAA ACCATGCGGTGTCCGATGCCCGGACGTCAAGATCTGTCAACAAGATCGTG ATTGATGGGGGTATTTTCCCGCTGCTTTTCGGCACGAAAGGGGACGATAC ACCGCTACAAACGAGCTCCTGTAAAGTTACAAGCTCACGCGGTTGGCTGG CAACGTCAGCAGTTGGGGATGCGGGTTATCGTGCTTTACAACCGAAATAA AGCATAAATGCGGAATCTAACCGGATCGTCGGGGTTATTGTCTAAAAGTC CTCTGGTTTCACGAACCTCCAAAAAGATAAACCAGCTTTCTCCTCTCCAA TATCGTACGTACGCGATGGACATCTATGTGTTTCACCATAATGAACAATG TTCCGTCATCTGCTGGGACGAGAAACCCTCTCGTTGTTGGAAGCGGTATG AGCACGAGCATGGAGCCCCTTCCCCGATCTGAGACGCTGGTACAAGATGG CCGCGAATAGCAACGAGGGGAAACAATAGGACCTGCGTAGACGTCTTTCA GTTCCACCCTCTCCCAAGCAGTGTCTAACGGTAAACGATCTCCTACACGC ATTTGCTGTCTCCTCCTCCGTTCCACCCGCTCGGTGTCTTGCCCGCAGCT CGCCCACTACATGCAGTATAAAGACTTCAACGATGCCTGGAGCAAGTACC TCGAGGAGTACGACCGCATGGCGCAGCTGTACACGCAGCAGATGACAGAG AGGCACACCGCCAGTCTCATGGAGTACCAGAAGAAGCTGCAGCAAGAGCT CAGGGATAAACCGCCCAAATGGTCCAAGGCGAGTAGTAAGTAGTGGTGTG CAACATTTAAGGAGATTGAGATTGCATGGTGTCATACGCAGAGAGGTCTG GCGTGCCCAGCAGACTCCCTCCCCGCTTCGGAGATAAATGACTACTGTAC TGTACTGTACTGTACTGTACTGTACTTCGCATACATTTCTTGGCGGCGTG GTGTGCACTTTGGTTTCCCTTTCGACGCTCTGCTCAATAGTGTGGGTCAA GGATTAGGGTTGACATCTTCGCTGCTGTGCTGGTTCAAGGGGAGTCTCTT TTACATATTGCAAATTTTCTTACGTTTTCGATATAAAAAAATGGGCTAAT CCGCCTCGTCCGTTCTGATAGATTGAGCGGCACGTTTAGTCTTTGGTTTT AAACCCATAACGGTGCTTTCGTCTTTTTTCGGTCTACTAACGTATATAGT TTGCCTATTATACTACTTACTGATTACTATACTTCCCACTTCCACGAAGG CACACCTGGCCCTGCATATTACTTTTACATGAAGACTTTTTACGCACTTT AAATCCCTTTACTTTAGGAATTGCTGGAGTGGAGACGGCGACAGCACATA TTGGCACGGCAGAAGAACTACGCCGAAGCACAGAAGGTGGGACAAGAAAA GCGTATTAGAAACCTGCACCTTGCCGATGGGGGGGGGGGGGAGGGGTGGA TGATGGTGGGGGGGGGGAGGGGGGGATGATGGTGGGGGGGGGGGACAGGT TACCGTCGCTGCGTCGTACTCGGTGCCGTTAAGCGAAAACGTCGGATTTC GTTTCGTGCACACCTTGAGGTATACTGGACTGTGGCCAGGAATGTTTGGC CGTAACCTATTTCGGTTGGGACGCATGGTGAGTGAATGCATAGTTTCTCT CCGACCGTTGAAGATCCAACAAGATACCAGCGCCTGACCCAACCAACGCG TAGTAGTACCCACTCTTCGTTGGTTGATCCCCTCGACTATAATATCAATA ATACGCCACAAAGGTAAAAAAAAACGCGGACAGGCTTGAGGAGTCGGAGC GAAACGTCAAAATGGAGAACTGGGGAATATACCTTGCCAGAAAAGAGGCC ACTTTTCGCGGGCAGCAACAGGTGCTCTCCTTCAGCCGGTCTCAACTCAT ATGGACGTGCGCAGCAGCTCTTGTTCAGAAACCCGAGCTTTACCTTGGCG GCGAGTAGCCGAGCACGAGTGCGTCTCAGAAACAACACCGTGAATCGAAG ACGAAATCCTGATTGATGCTTGTTAGAACATGGTGTGCTTCAGCATTCCG AGAGGAAAGAGTGTCGCGTCGTTGGAAGAGACACACGCGTGGGTAAGGCT GCCAGGGGTTTTTGGCCCACGTGGCATGAAACGGTCCATGAATTTTACCC TTTACCTGACTGAGCGTTGAGGGTACTTTAGCGTCGAGGACACTGGAAGT TCCACACTCTCACAAACAAACAAAATATTATGATAGCTCGAGTACTTCAA TCAAAGGCTCCCCCGGTACGTCATGCATTATTGTCAGGAGCTGGACATGA AATATAGTTTTTGGAAGCTGCAAGTATCGACTTTGGTTCAAGACTTTTCG GCTCCTCGTACGATTTCTTTAGACCTGAAGGAGACTCGATCGTTCCCTTC GAGCAGTACACTAATTCATAATTTACTTGCTTATATCCAACGTGCTTGCG TATCACCCACTACGCCACTCCTGTTTACGACCAACACTGCATTTCCCCCG GTATTCTTTCATGAACTGGTGCATAAAAGCCTGTTTGGGTGCGTCAAAGC CTGAACTTCATAAAGTCATAATTATATTAATATATGCCCGCGCTATCAAC CGGCAAACACACACACACACAAAACTACCGTCGGTCGAATAACTTCGTTG ACGCCAGTCGGAGCTACAAGCGCTGCTAAAGCGTATCAACGCACGGCGAA AGGAGCATCTCAAACAGCGCAACCTCGACAGCAAGCGACTGCTGCAGCGT AATCGAAACGTCCAGAACGTGCTCGAGTCTAAGCAGAACGTGGAGGGAAT CAAGCTCACAGAAGAAATAAAAAAGGCGAGAGCCCCCGATTATTATTCGC CACATATTTACAAACGAGTTTGCACTACGTGCTTGTACCTATCATGTATA TGTAGACAAAATGTATCTCGCGAGGCTGAAGAAATTGGCAACTGACATTT TTGAGCATCACTCGATCGTCTGGCACAGTATTCTTAGAAACAGGGCTTCT GAAAACACCTTTACTTTTTGGTCTTGAATCCCTCAGGCAATTGAATAGTT CGCGAATGATCCTTTCACGCTCTAGAAATAACGGTGTGGTGGAAGTTTCC ACAAGACCATACGACGCAGTCCCAATAAACGAAAAAAGTCTCCGGACTAA GCGCACGGGCATCTAATGAATAACCCGCACCTCACGTCCGAAATGCGCTT TTTGCTGCTCCCCCAGAGCGTCATGAGCGCGATGCCGGGCGGGATGGTGT CCACACCCCCGGATCCTTCCCAAAAAATACCGCCGGAAGCGAGGGGGCGG GTGCGACGGAAGAAGAAGATTTCGGGGGCGGCATCGTCTTTAGGGTTTTC CCCGACGGCGGCGTCGGCGACCTCAGCCGAGGCGGAGGGCATGGAAAAAT ATCTAGAAGAAGATAGTTGCAAAGATCAAACTTTCGTGACGAACAAGGGA TACCAAGAGGAGGACACTCTGAGCGTAAAGCGTCAACAGATTGCATGAGG CGAACAAACATGTGGAGAAGATCTCGAGCATCACAGCCGTCGCCGTTGAT GAGACAGAGGATAGGGTCCGCGTTTAAAACAGCGACGCAGGAGGGGTGCT CTGAGGTAGTCCGTACACCGCTGCGCTTCTGTTTTCTTTTTGCGTGTGTG TAGTCCTCGCTAATTTTATTTAGGTTTTATTCCCTGACGGGGTTGTATAA CGGCTAGCACCGCTCTATCCTTCGAATTCGGGACACAATAAAACATACAC ACCAGTAACTAACTTGAAAACAGTACGGGCAACAAAAATAAAATAGTATA CATGAGAACGAGAGGAAACCCAAC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig865:264821..270844+

>mRNA_A-nodosum_M_contig865.42.2 ID=mRNA_A-nodosum_M_contig865.42.2|Name=mRNA_A-nodosum_M_contig865.42.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1410bp|location=Sequence derived from alignment at A-nodosum_M_contig865:264821..270844+ (Ascophyllum nodosum dioecious)
ATGGAGGCGTCAAATGAGCGCCGTGACGTCGCTGGGGAGGATGGAGATGC
GGGAAAAGGGATGGGTAGCTCTAGTGAAACGTGTGACCAAGCTCCGGAAA
CTGGCGTCGGAGCTCGAAGTAGTGGTTTTTACGGGAGTGAGGATATGTCC
GCCCTCAAGGAGATCTTCAGTCTCTACGACATCGACAAAAAGGGAACGGT
AGCAATCAACGACCTCGAGGGGATCCTTCAGAAAGTGGGACACAGTTCTG
ATGCTGTCAAGAGAATCACGGCCGCGGCAGCTGCTACTGACGAGGCAGGA
ATGGAAGCTCGGATATCTTTCGACGACTTTATTCGCCTCTTGGAGCAAGC
AGGGCCCACGGACCCGTTAGACGGACCGGACCCGAAGGTAGTAGAATTCC
TCCGCATCTTGGAGGAGTACCGCTTGAAGTGCGAGGAAGGCGGGGATTAT
CTTGAGGCGGGTCGGGCGCTACGACAGCTGGACGTACTCCGCAGGCAGGA
AACTCGGAGGCAGCAGAGGGCAGTGCGGGCAAGGCAACTTTACGAGCGAA
GGGACGTTCAGCTCGCCCACTACATGCAGTATAAAGACTTCAACGATGCC
TGGAGCAAGTACCTCGAGGAGTACGACCGCATGGCGCAGCTGTACACGCA
GCAGATGACAGAGAGGCACACCGCCAGTCTCATGGAGTACCAGAAGAAGC
TGCAGCAAGAGCTCAGGGATAAACCGCCCAAATGGTCCAAGGAATTGCTG
GAGTGGAGACGGCGACAGCACATATTGGCACGGCAGAAGAACTACGCCGA
AGCACAGAAGGTAAAAAAAAACGCGGACAGGCTTGAGGAGTCGGAGCGAA
ACGTCAAAATGGAGAACTGGGGAATATACCTTGCCAGAAAAGAGGCCACT
TTTCGCGGGCAGCAACAGTCGGAGCTACAAGCGCTGCTAAAGCGTATCAA
CGCACGGCGAAAGGAGCATCTCAAACAGCGCAACCTCGACAGCAAGCGAC
TGCTGCAGCGTAATCGAAACGTCCAGAACGTGCTCGAGTCTAAGCAGAAC
GTGGAGGGAATCAAGCTCACAGAAGAAATAAAAAAGGCGAGAGCCCCCGA
TTATTATTCGCCACATATTTACAAACGAAGCGTCATGAGCGCGATGCCGG
GCGGGATGGTGTCCACACCCCCGGATCCTTCCCAAAAAATACCGCCGGAA
GCGAGGGGGCGGGTGCGACGGAAGAAGAAGATTTCGGGGGCGGCATCGTC
TTTAGGGTTTTCCCCGACGGCGGCGTCGGCGACCTCAGCCGAGGCGGAGG
GCATGGAAAAATATCTAGAAGAAGATAGTTGCAAAGATCAAACTTTCGTG
ACGAACAAGGGATACCAAGAGGAGGACACTCTGAGCGTAAAGCGTCAACA
GATTGCATGA
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