mRNA_A-nodosum_M_contig861.41.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5KLE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE4_9PHAE) HSP 1 Score: 105 bits (261), Expect = 8.270e-25 Identity = 49/69 (71.01%), Postives = 59/69 (85.51%), Query Frame = 2
Query: 14 VSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVAPV 220
VSG E V RKVKRTYR+RTR+ASCFCSACQR YE C+V++ YP +VPAL+ G+V+ET+IMDTGVAPV
Sbjct: 134 VSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQKGEVKETVIMDTGVAPV 202
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5JDR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR7_9PHAE) HSP 1 Score: 103 bits (258), Expect = 1.420e-24 Identity = 48/71 (67.61%), Postives = 60/71 (84.51%), Query Frame = 2
Query: 8 ESVSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVAPV 220
+ VSG E V RKVKRTYR+R+R+ASCFCSACQR YE C V++ YP +VPAL++G+V+ET+IMDTGVAPV
Sbjct: 109 DPVSGEEDVTCRKVKRTYRLRSRLASCFCSACQRCEYEQCDVSKTYPRLVPALQEGEVKETVIMDTGVAPV 179
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5JLE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE6_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.000e-24 Identity = 50/69 (72.46%), Postives = 60/69 (86.96%), Query Frame = 2
Query: 14 VSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVAPV 220
VSG E V RKVKRTYR+RTR+ASCFCSACQR YE C+VN+ YP +VPAL++G+V+ET+IMDTGVAPV
Sbjct: 354 VSGEEGVTCRKVKRTYRLRTRLASCFCSACQRFEYEQCYVNKKYPRLVPALQEGEVKETVIMDTGVAPV 422
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5L2L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L6_9PHAE) HSP 1 Score: 105 bits (261), Expect = 2.240e-23 Identity = 48/71 (67.61%), Postives = 61/71 (85.92%), Query Frame = 2
Query: 8 ESVSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVAPV 220
+ VSG E V RKVKRTYR+RTR+ASCFCSACQR +E C+V++ YP ++PALR+G+V+ET+IMDTGVAPV
Sbjct: 613 DPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEHEQCYVSKTYPRLLPALREGEVKETVIMDTGVAPV 683
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5JBS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS1_9PHAE) HSP 1 Score: 103 bits (256), Expect = 3.420e-23 Identity = 48/71 (67.61%), Postives = 59/71 (83.10%), Query Frame = 2
Query: 8 ESVSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVAPV 220
+ VSG E V RKVKRTYR+RTR+ASCFCSACQR YE C+V++ YP +VPAL+ G+V+ET+IMDTG APV
Sbjct: 289 DPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQQGEVKETVIMDTGGAPV 359
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5JA27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA27_9PHAE) HSP 1 Score: 101 bits (251), Expect = 8.880e-23 Identity = 46/71 (64.79%), Postives = 59/71 (83.10%), Query Frame = 2
Query: 8 ESVSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVAPV 220
+ V G E V RKVKRTYR+RTR+ASCFCSACQR YE C+V++ YP +VPAL++G+V+ET+I DTGVAP+
Sbjct: 208 DPVPGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVITDTGVAPL 278
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5KGU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU5_9PHAE) HSP 1 Score: 101 bits (252), Expect = 3.790e-22 Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 2
Query: 8 ESVSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVA 214
E +SG EVV VRK R + +RTR+ASCFCSACQR +YEDC+VNRAYP +VP +R+G+V+ET+IMDTGVA
Sbjct: 619 EPMSGEEVVVVRKETRVHMLRTRLASCFCSACQRFQYEDCYVNRAYPDLVPPMREGKVKETVIMDTGVA 687
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 100 bits (250), Expect = 7.000e-22 Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 2
Query: 8 ESVSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVAPV 220
+ VSG E V RKVKRTY +RTR+ASCFCSACQRS YE C+V++ YP +VPA++ G V+ET+ MDTGVAPV
Sbjct: 819 DPVSGEEDVTCRKVKRTYSLRTRLASCFCSACQRSEYEQCYVSKTYPRLVPAMQKGVVKETVTMDTGVAPV 889
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5KTJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ4_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.170e-21 Identity = 60/134 (44.78%), Postives = 80/134 (59.70%), Query Frame = 2
Query: 8 ESVSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVAPVGYHL*VWTENMSDGDG---YWDSVARERLGGGFQVVGGA------WK--GGRTHSYYCPFRIV 376
+ +S E V RKVKRTY +RTR+ASCFCSAC RS YE C+V++ YP +VPA++D V+E +IMDTGVAPV EN S+G Y ++R+ G G + W+ G + Y+CPFR V
Sbjct: 421 DPISREEDVTCRKVKRTYSLRTRLASCFCSACLRSEYEQCYVSKTYPRLVPAMKDDVVKEPVIMDTGVAPVD-------ENASEGINFPRYKKECKKKRITGTQWQEGDSATASKIWEELGRKKAQYFCPFRKV 547
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Match: A0A6H5JQK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQK2_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 4.370e-21 Identity = 49/85 (57.65%), Postives = 63/85 (74.12%), Query Frame = 2
Query: 8 ESVSG*EVVGVRKVKRTYRIRTRVASCFCSACQRSRYEDCHVNRAYPSIVPALRDGQVRETIIMDTGVAPVGYHL*VWTENMSDG 262
+ +SG E V +KVKRTY +RTR+ASCFCSAC+RS YE +V++ YP +VPA+ DG V+ET+IMDTGVAPV EN S+G
Sbjct: 590 DPISGEEDVTCKKVKRTYSLRTRLASCFCSACRRSEYEQYYVSKTYPRLVPAMEDGVVKETVIMDTGVAPVD-------ENSSEG 667 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig861.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig861.41.1 >prot_A-nodosum_M_contig861.41.1 ID=prot_A-nodosum_M_contig861.41.1|Name=mRNA_A-nodosum_M_contig861.41.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=152bp SRRVGIGLGGGWCEEGETDVQDQNPCGVVFLLGVPEVSIRGLPRQQSVPEback to top mRNA from alignment at A-nodosum_M_contig861:245643..246098+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig861.41.1 ID=mRNA_A-nodosum_M_contig861.41.1|Name=mRNA_A-nodosum_M_contig861.41.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=456bp|location=Sequence derived from alignment at A-nodosum_M_contig861:245643..246098+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig861:245643..246098+ >mRNA_A-nodosum_M_contig861.41.1 ID=mRNA_A-nodosum_M_contig861.41.1|Name=mRNA_A-nodosum_M_contig861.41.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=456bp|location=Sequence derived from alignment at A-nodosum_M_contig861:245643..246098+ (Ascophyllum nodosum dioecious)back to top |