mRNA_A-nodosum_M_contig854.17.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: D7FPJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ1_ECTSI) HSP 1 Score: 416 bits (1068), Expect = 8.320e-145 Identity = 202/250 (80.80%), Postives = 226/250 (90.40%), Query Frame = 1
Query: 1 ANRGIGLEVTRQLLERTKGNVVAACRDPSSAEHLHELKATADFEGRLDIVRMDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 750
ANRGIGLEVTRQLLER KG VVAACRDPSSA L L A E RLD+V+MDI+DQ S+E AA+H+++T+GRVDLLFNVAGVLGDGKNTPGPERS+RAMDRDWLRHT+EVN IGP+MLV+AL PLLESPAKKG+ GA+PPSVVVNFSARVGSIGDN LGGWHSYRMSKSALNMATKGIS+EL+RRRVW FSYHPGTTDTGLS+PFQANVKPEKLFT +TV +VL IVDSM+++LSGGFYAFDGS+I W
Sbjct: 46 ANRGIGLEVTRQLLERAKGTVVAACRDPSSAADLRALGRIAGNEKRLDMVKMDIEDQTSLETAAEHVRSTYGRVDLLFNVAGVLGDGKNTPGPERSVRAMDRDWLRHTLEVNTIGPMMLVAALTPLLESPAKKGDDGAKPPSVVVNFSARVGSIGDNGLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTDTGLSEPFQANVKPEKLFTPDYTVSQVLGIVDSMTEDLSGGFYAFDGSRIVW 295
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: A0A836C8A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A3_9STRA) HSP 1 Score: 306 bits (783), Expect = 1.520e-101 Identity = 152/251 (60.56%), Postives = 193/251 (76.89%), Query Frame = 1
Query: 1 ANRGIGLEVTRQLLERTKGNVVAACRDPSSAEHLHELKATADFEGRLDIVRMDIKDQASVEAAADHMKNTF-GRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 750
A+RG+GLE+ +QL RT+G+V+A+CR PS A L L + GR+ ++ +D+ DQASV+AAA H+ GR+D LFNVAG+LGDG+ TPGPERSL A+ RDWLRH+MEVN IGP+ML A+AP L + G+ A+ PSVVVNFSARVGSI DN LGGWHSYRMSKSALN ATK +++ELKR+ W F+YHPGTTDT LS+PFQANVKPEKLFT +FTV R+LD+ D+M + +GGFY + G+ + W
Sbjct: 45 ASRGLGLELAKQLASRTQGHVIASCRQPSKALELQALAQS--HPGRMTVLELDVTDQASVDAAAAHVAALHNGRLDALFNVAGLLGDGRATPGPERSLGAIQRDWLRHSMEVNVIGPVMLAQAMAPHLRT---TGQGRAKTPSVVVNFSARVGSISDNRLGGWHSYRMSKSALNQATKCMALELKRQGTWAFAYHPGTTDTDLSRPFQANVKPEKLFTPAFTVGRMLDLCDNMDQQHTGGFYDYSGTFLLW 290
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: A0A7S2UED2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UED2_9STRA) HSP 1 Score: 278 bits (710), Expect = 6.790e-90 Identity = 130/255 (50.98%), Postives = 186/255 (72.94%), Query Frame = 1
Query: 1 ANRGIGLEVTRQLLERTKGNVVAACRDPSSAEHLHELKATADF-----EGRLDIVRMDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 750
A+RGIGL+ + L++RT+G +VA CR P +A LH T R++++++DI+DQ S++ ++ ++N++ RVD+L NVAG+LGDG +TPGPERSL +DRDW+ +M VN IGP+ML AL+PL+ SP ++G++ R +++ N SARVGSI DN LGGW+SYR SK+ALN AT+ +S ELKR+ WT + HPGTTDT LSKPFQ NV+ E+LF FTV+++LD++DSM ++ SGG Y + G IP+
Sbjct: 78 ASRGIGLQFVKSLIDRTEGKIVACCRSPENAHGLHTFLETMSLTDSLDRDRIEVLKLDIEDQTSIDELSNSIRNSYNRVDVLLNVAGLLGDGTSTPGPERSLAKLDRDWIEKSMAVNVIGPVMLSQALSPLMASP-QRGKEDKRATTLIANLSARVGSISDNGLGGWYSYRFSKAALNQATRTMSHELKRKGTWTIALHPGTTDTDLSKPFQRNVQAERLFPVEFTVEKLLDVMDSMEEQNSGGLYDWAGKAIPF 331
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: A0A7S2HD28_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD28_9STRA) HSP 1 Score: 270 bits (690), Expect = 2.140e-86 Identity = 133/259 (51.35%), Postives = 182/259 (70.27%), Query Frame = 1
Query: 1 ANRGIGLEVTRQLLERTKGNVVAACRDPSSAEHLHE-LKATADFEGRLDIVRMDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGA--------RPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 750
++RGIGL+ + L++R++G ++A CR P SA+ L+E L ++ R+ +++D++DQAS++AAA+ +K ++ RVD LFNVAG+LGDGK+ PGPERSL +DRDW+ TM VN IGP+ML ALAP++ S R SV+VN SARVGSI DN LGGW+SYR SKSALN AT+ ++ ELKR+ WT + HPGTT+T LSKPFQ NV+ +LF FTV R+LD+VD M D SGG Y + G+ +P+
Sbjct: 108 SSRGIGLQFVKSLVDRSQGTILACCRSPDSADKLNEFLSSSPQASQRVKTIQLDVEDQASIDAAAEEIKTSYNRVDCLFNVAGILGDGKSDPGPERSLSKLDRDWVEKTMAVNVIGPVMLSQALAPMMISKXXXXXXXXXXXXXXXXRAQSVIVNLSARVGSISDNELGGWYSYRFSKSALNQATRTMAHELKRQGTWTVALHPGTTNTDLSKPFQRNVQEGRLFPVEFTVGRLLDVVDGMEDRHSGGLYDWSGTALPF 366
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: A0A448YYN6_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYN6_9STRA) HSP 1 Score: 269 bits (687), Expect = 6.850e-86 Identity = 132/263 (50.19%), Postives = 180/263 (68.44%), Query Frame = 1
Query: 1 ANRGIGLEVTRQLLERTKGNVVAACRDPSSAEHLHELKATADFEGR--LDIVRMDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGA-----------RPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 750
A+RGIGL+ +LL TKG V+A CR P A L +L +T D + R ++++++D+++Q S+E +A +K +GRVDLL NVAG+LGDGKNTPGPERS+ ++R+W+ T +VN IGP+ML LAPL+ + G + A R VV N SARVGSI DN LGGW+SYRMSKSALN AT+ ++ ELKR+ VW + HPGTTDT LSKPFQ NV+ ++LF FTV +++++DSM + SGG Y + G IP+
Sbjct: 108 ASRGIGLQFVSKLLSDTKGRVIAGCRSPDDAPKLQDLLSTLDKKSRNRVEVIKLDVENQDSIELSAAEIKVQYGRVDLLLNVAGILGDGKNTPGPERSVAKIEREWMEKTFQVNVIGPVMLAKELAPLMTQARRTGRRKADSSDETLSEKQRAVGVVANLSARVGSISDNGLGGWYSYRMSKSALNQATRTLANELKRKSVWCIALHPGTTDTDLSKPFQKNVQKDRLFPVEFTVDSLMNVIDSMEEHNSGGLYDWAGKAIPF 370
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: A0A7S2YRX8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX8_9STRA) HSP 1 Score: 268 bits (684), Expect = 2.970e-85 Identity = 136/256 (53.12%), Postives = 181/256 (70.70%), Query Frame = 1
Query: 1 ANRGIGLEVTRQLLERTKGNVVAACRDPSSAEHLHELKATADFEGRLDIVRMDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDG-KNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKK--GEKG-----ARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKI 744
A+RGIGL+ + LLERTKG +VA CR PS+A L EL+ + R+DIV +D+++Q+++E A ++ + RVD LFNVAG+LGDG K TPGPERS+ MDR WL TM VN IGP+ML L+ ++ + K+ ++G RP +VVVN SARVGSI DN LGGW+SYRMSKSALN AT+ +++ELKR+ W + HPGTT+T LS+PFQANVK LF FTV ++LD+VD + D+ SGGFY + G +
Sbjct: 127 ASRGIGLQFVKSLLERTKGTIVACCRSPSAATELIELRESMSSSKRIDIVALDLEEQSTIEKAGSFLREKYDRVDGLFNVAGLLGDGGKTTPGPERSISKMDRGWLEKTMAVNVIGPVMLTKELSSMIMTRRKRQRSKEGDIADTERPIAVVVNLSARVGSIADNGLGGWYSYRMSKSALNQATRTMALELKRQSAWAVALHPGTTNTDLSRPFQANVKEGSLFPVEFTVGQLLDLVDRLEDKHSGGFYDWAGQSL 382
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: A0A7S2F9C9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9C9_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.670e-84 Identity = 130/232 (56.03%), Postives = 166/232 (71.55%), Query Frame = 1
Query: 67 AACRDPSSAEHLHELKATADFEGRLDIVRMDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGA----RPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 750
A CR P++A LH L T+ GRL++ ++D+ DQASVEA A + R D+L NVAG+L D + PER+L+++DR+W T+EVN +GP+ML AL PLL S + K A RPPSVV N SARVGSIGDN +GGW+SYR+SK+ALNMATK +S+ELKR VW + HPGTTDTGLSKPFQ NVKPEKLFTT FTV ++L +V+SM +G F+A+DG +I W
Sbjct: 1 AGCRSPAAATDLHALAETSS--GRLEVAQLDVGDQASVEAFAASVAEKHQRCDMLLNVAGILHDEAHPAAPERALKSVDREWFSKTLEVNTVGPLMLAQALEPLLRSTGRGAAKTASGETRPPSVVANLSARVGSIGDNGMGGWYSYRISKAALNMATKNMSLELKRSGVWCVTLHPGTTDTGLSKPFQKNVKPEKLFTTKFTVSQLLGVVESMDVSHTGSFFAWDGQEIEW 230
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: B7FYH7_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYH7_PHATC) HSP 1 Score: 259 bits (663), Expect = 9.070e-84 Identity = 126/252 (50.00%), Postives = 172/252 (68.25%), Query Frame = 1
Query: 1 ANRGIGLEVTRQLLERTKGNVVAACRDPSSAEHLHELKATADFEGRLDIVRMDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKK----GEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKI 744
A+RGIGL+ + L+ R +G++VA CR P AE L E AT + R+ IV +D++DQ S+E A +K FGRVD+L NVAG+LGD K TPGPERSL ++RDW T+ +N IGP+ML L+PL+ K+ + R +V+ + SARVGSI DN LGGW+SYRMSKSALN AT+ +++E+KR W + HPGTTDT LSKPFQ+NVK LF FT +++++++DSM++ SGG Y + G I
Sbjct: 7 ASRGIGLQFVKTLILRARGSIVACCRSPEKAELLQEFIATLEDPRRIRIVSLDLEDQTSIERAGAEIKEMFGRVDMLLNVAGLLGDAKTTPGPERSLAKVERDWFEKTLAINTIGPVMLSKELSPLMMQRRKRKSSDNDTETRAVAVIASLSARVGSISDNGLGGWYSYRMSKSALNQATRTMALEMKRCSTWCIALHPGTTDTDLSKPFQSNVKDGSLFPVDFTTEKLMNVIDSMTENNSGGLYDWAGQAI 258
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: A0A7S3PXF5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXF5_9STRA) HSP 1 Score: 259 bits (662), Expect = 2.160e-82 Identity = 128/252 (50.79%), Postives = 176/252 (69.84%), Query Frame = 1
Query: 1 ANRGIGLEVTRQLLERTKGNVVAACRDPSSAEHLHE-LKATADFEGRLDIVR-MDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGARPPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 750
A+RGIGL++ + L RTKG +VA CR P A+HLH +K+ E R +++ +D+++Q ++E ++++ RVD+L+NVAG+LGDGKNTPGPERSLR++DR+W +M VN IGP+ L LAP++ S KK ++G SV+VN SARVGSI DN LGGW SYR SK+ALN A + ++ ELKR+ HPGTTDTGLSKPFQ NVK E+LF FT R++D VD M + +GG Y + G+ +P+
Sbjct: 101 ASRGIGLQILKDLATRTKGTIVACCRAPKEADHLHSFIKSLPTNESRRILLKSLDLEEQETIETLGKEIEDSHKRVDVLYNVAGILGDGKNTPGPERSLRSLDRNWAMKSMNVNYIGPVSLSQVLAPMMRSTLKKDDRGK---SVIVNLSARVGSISDNGLGGWISYRSSKAALNQANRTMAHELKRQGTLCICLHPGTTDTGLSKPFQGNVKKERLFPVEFTASRMIDAVDCMDELNTGGLYDWSGTALPF 349
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Match: A0A7S4MLR2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MLR2_9STRA) HSP 1 Score: 259 bits (662), Expect = 4.590e-82 Identity = 130/267 (48.69%), Postives = 181/267 (67.79%), Query Frame = 1
Query: 1 ANRGIGLEVTRQLLERTKGNVVAACRDPSSAEHLHELKAT--ADFEGRLDIVRMDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDG-KNTPGPERSLRAMDRDWLRHTMEVNCIGPIMLVSALAPLLESPAKKGEKGAR--------------PPSVVVNFSARVGSIGDNSLGGWHSYRMSKSALNMATKGISVELKRRRVWTFSYHPGTTDTGLSKPFQANVKPEKLFTTSFTVQRVLDIVDSMSDELSGGFYAFDGSKIPW 750
ANRGIGL+ + +L+R++G + A CR P AE L +KA+ A+ R+ +VR+D++DQ S+E AAD ++ +GRVD L NVAG+LGDG ++TPGPERSL +DR+W ++ VN IGP+ML ALAPL+ + +G++ R PS+V N SARVGSI DN LGGW+SYR+SK+ALN AT+ ++ ELKR+ + HPGTTDT LS PFQ NV +LF FTV+++LD +D++ DE SGG Y + G +P+
Sbjct: 108 ANRGIGLQFVKAVLDRSRGRIAACCRSPRDAEALEAVKASLPAEERERIRLVRLDVEDQMSIEGAADEIRTEYGRVDALLNVAGILGDGGESTPGPERSLGKIDREWTAKSLAVNVIGPVMLAQALAPLMRTKGGRGQRRTRRKTSDEGEEKEEQRAPSIVANLSARVGSISDNELGGWYSYRLSKAALNQATRTMAHELKRQGTRAVALHPGTTDTDLSAPFQRNVAEGRLFPVEFTVRQLLDCIDNLDDEHSGGLYDWSGRALPF 374 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig854.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig854.17.1 >prot_A-nodosum_M_contig854.17.1 ID=prot_A-nodosum_M_contig854.17.1|Name=mRNA_A-nodosum_M_contig854.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=200bp MDIKDQASVEAAADHMKNTFGRVDLLFNVAGVLGDGKNTPGPERSLRAMDback to top mRNA from alignment at A-nodosum_M_contig854:169759..171298+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig854.17.1 ID=mRNA_A-nodosum_M_contig854.17.1|Name=mRNA_A-nodosum_M_contig854.17.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1540bp|location=Sequence derived from alignment at A-nodosum_M_contig854:169759..171298+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig854:169759..171298+ >mRNA_A-nodosum_M_contig854.17.1 ID=mRNA_A-nodosum_M_contig854.17.1|Name=mRNA_A-nodosum_M_contig854.17.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=600bp|location=Sequence derived from alignment at A-nodosum_M_contig854:169759..171298+ (Ascophyllum nodosum dioecious)back to top |