mRNA_A-nodosum_M_contig847.27.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig847.27.1
Unique NamemRNA_A-nodosum_M_contig847.27.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 4.410e-133
Identity = 177/210 (84.29%), Postives = 198/210 (94.29%), Query Frame = 1
Query:    1 MVALGPTIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKKP 627
            MV +GP +M+ + PIDSYPVRFVYN+VQ++LCSYM +EAFMIAYRN YP+L CAPFDA+NPPA NLLWLFY+SK+LDFMDT+FI+LKKSWRQLSFLHVYHHCTIF FYWLNVNAGYDGDVYLTI+LNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMT+QA++LL TGCT+YPPRIV VYAGYILSLL LFA+FYV+SYTKKP
Sbjct:    1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKP 210          
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA)

HSP 1 Score: 300 bits (767), Expect = 4.260e-100
Identity = 139/210 (66.19%), Postives = 169/210 (80.48%), Query Frame = 1
Query:    4 VALGPTIMSKLQPIDS--YPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKK 624
            + +G  +M  +QP+D+  YP RF+YN+VQ+MLCSYM +EA +IA+RN Y +L C PF+ +NPP GN+LWLFYISKILDF DT+FI+L+K W+QLSFLHVYHH TIF FYWLN+N GYDGD+YLTI+LNGFIHTVMYTYYFVSMHT  IWWK  LT MQM+QFV M SQA++LL TGCT YPPR+   Y  YI SLL+LF  F++ SY  K
Sbjct:   52 IFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSYMPK 261          
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA)

HSP 1 Score: 290 bits (741), Expect = 5.490e-96
Identity = 139/195 (71.28%), Postives = 162/195 (83.08%), Query Frame = 1
Query:   43 IDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKK 624
            I  YPV+F+YN+VQVMLCSYM+IEA M+A+R  Y  L C PF+AKNPP   +L++FY+SKILDFMDT FII+ K W+QLSFLHVYHH +IF FYWLN+N GYDGDVYLTI+LNGFIHTVMYTYYFVS+HTKDIWWK  LT+ QMIQFV M +QA +LL TGC +YPPRIV  Y  YILSLL+LFA F+V SY KK
Sbjct:   76 IKLYPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLKK 270          
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A0G4I034_9ALVE (Elongation of fatty acids protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I034_9ALVE)

HSP 1 Score: 282 bits (721), Expect = 9.470e-93
Identity = 130/193 (67.36%), Postives = 157/193 (81.35%), Query Frame = 1
Query:   49 SYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKK 624
            +YP RFVYN+ QVMLCSYM+IEA ++AYRN+Y L+ C  F+ +NPP  NLLW+FYISKI DF DT+FIIL K W+QLSFLHVYHH TIF  YW+N+  GYDGDVYLTI+LNGFIH VMYTYYF+SMHTKDIWWK  LT MQM+QF+CM  QA ++L  GC  YPPR+  +Y  YI+SL LLFA+F+V +Y+KK
Sbjct:   92 TYPFRFVYNVAQVMLCSYMTIEAVLLAYRNDYGLVPCVKFNPQNPPVANLLWMFYISKIFDFADTIFIILGKKWQQLSFLHVYHHATIFSIYWVNLRLGYDGDVYLTIVLNGFIHAVMYTYYFLSMHTKDIWWKSKLTSMQMLQFICMNVQASWMLLNGCQQYPPRLTAIYLVYIMSLFLLFAQFFVRTYSKK 284          
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC)

HSP 1 Score: 280 bits (717), Expect = 1.920e-92
Identity = 130/208 (62.50%), Postives = 164/208 (78.85%), Query Frame = 1
Query:    1 MVALGPTIMSKLQPID--SYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSY 615
            +V +G  +M   + +D  +YP+RFVYN++QVMLCSYM++EA ++AYR+ Y L+ C PF  +NPP   +LWLFYISK+LDFMDT FI+L K W QLSFLHVYHH TIF  YW+NVN GYDGD+YLTI+LNGFIHTVMYTYYFVSMHTKDIWWKKYLT+MQMIQF+ M  QA++LL + C  +P ++  +Y  YI+SL  LF  F++ SY
Sbjct:   58 LVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSY 265          
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A6T8G4U0_HEMAN (Elongation of fatty acids protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8G4U0_HEMAN)

HSP 1 Score: 280 bits (716), Expect = 2.240e-92
Identity = 131/208 (62.98%), Postives = 160/208 (76.92%), Query Frame = 1
Query:    4 VALGPTIMSKLQPID--SYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYT 618
            V  G  +M+   P+D  +YP+RF YN+VQ+MLCSYM+IEA  +AYRN Y +  C PFD K+PP G LLWLFY+SKILDF+DT  IIL K W QLSFLHVYHH TIF  YW+NVN GYDGD+YLTI+LNG IHT+MYTYYFVSMH++DIWWKKYLT+ QMIQF+CM SQA+ L+   C  +P R+   Y  YI++L  LF KF++ SYT
Sbjct:   53 VLAGRIVMTVFHPMDRLTYPIRFCYNIVQMMLCSYMTIEAAALAYRNGYNMYPCNPFDTKSPPLGPLLWLFYVSKILDFVDTAVIILGKKWGQLSFLHVYHHATIFIMYWVNVNVGYDGDIYLTIVLNGVIHTIMYTYYFVSMHSRDIWWKKYLTMCQMIQFICMNSQAILLIKDHCKTFPARVTMTYLFYIITLFFLFLKFFITSYT 260          
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A7S4JGP6_9STRA (Elongation of fatty acids protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JGP6_9STRA)

HSP 1 Score: 279 bits (714), Expect = 4.970e-92
Identity = 136/218 (62.39%), Postives = 163/218 (74.77%), Query Frame = 1
Query:    4 VALGPTIM-SKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKKP 627
            V +G  +M S +  +D YP++F YN+ Q+MLC+YM+IE F++AYRN Y  L C   D KNPP  NLLWLFY+SK+ DF DT+FI+L K WRQLSFLHVYHH TIF FYWLN +  +DGD+YLTI+LNGFIHTVMYTYYF+ MHTKD        IWWK  LTLMQ+IQF+ M SQA +LL TGC     R+V+VY  YILSL  LFA+FYV SYTKKP
Sbjct:   51 VVIGSAVMKSGVAAMDPYPIKFFYNVSQIMLCAYMTIEGFLLAYRNGYTCLPCIDIDTKNPPLANLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNAHVNFDGDIYLTIVLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSSLTLMQLIQFITMMSQATYLLVTGCQKTGLRVVSVYFVYILSLFFLFAQFYVASYTKKP 268          
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A1S7C7Q3_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q3_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.100e-91
Identity = 134/216 (62.04%), Postives = 162/216 (75.00%), Query Frame = 1
Query:    1 MVALGPTIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYT------KKP 627
            +V +G  +M   QP+  Y ++F YN+ QV LCSYM IEA + AYRN Y  L C PF+A NPP   LLWLFY+SK+ DF DT+FIIL K W QLSFLHVYHH TIF  YWLN+NAGYDGD++LT++LNG IHTVMYTYYF+SMHTKDIWWKKYLTL Q+IQF+ M +QA++LL  GC  + P+I  +Y GYILSLL+LF  FY  SY+      KKP
Sbjct:   56 IVFVGSAMMKNAQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKP 271          
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.370e-91
Identity = 138/216 (63.89%), Postives = 162/216 (75.00%), Query Frame = 1
Query:    4 VALGPTIM-SKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTK 621
            V +G  +M S +  +D YP++F+YN+ Q+MLC+YM+IEAF++AYRN Y  L C   D +NPP  NLLWLFYISK+ DF DT+FI++ K WRQLSFLHVYHH TIF FYWLN +  YDGD+YLTILLNGFIHTVMYTYYF+ MHTKD        IWWK YLTLMQMIQFV M SQA +LL T C     R+V VY  YILSL  LFA+FYV SYTK
Sbjct:   51 VVIGSAVMKSGVAAMDPYPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTK 266          
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: W7TSM8_9STRA (Elongation of fatty acids protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM8_9STRA)

HSP 1 Score: 278 bits (710), Expect = 7.910e-91
Identity = 133/210 (63.33%), Postives = 161/210 (76.67%), Query Frame = 1
Query:    4 VALGPTIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTK-KP 627
            V +G  +M   QP+  Y ++F YN+ QV LCSYM IEA + AYRN Y LL C PF+  NPP G LLWLFYISKI DF DT+FIIL K W QLSFLHVYHH TIF  YWLN+NAGYDGD++LT++LNG IHTVMY YYF+SMHTKDIWWKKYLTL Q+IQF+ M +QA+++L  GC ++P +I  +Y GYILSLL+LF  FY  +Y+  KP
Sbjct:   69 VFVGSIVMKDAQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKP 278          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS6_ECTSI4.410e-13384.29Elongation of fatty acids protein n=2 Tax=Ectocarp... [more]
A0A835Z8H5_9STRA4.260e-10066.19Elongation of fatty acids protein n=1 Tax=Tribonem... [more]
A0A6U1Q8V8_9STRA5.490e-9671.28Elongation of fatty acids protein n=1 Tax=Fibrocap... [more]
A0A0G4I034_9ALVE9.470e-9367.36Elongation of fatty acids protein n=1 Tax=Chromera... [more]
L1IAX0_GUITC1.920e-9262.50Elongation of fatty acids protein n=2 Tax=Guillard... [more]
A0A6T8G4U0_HEMAN2.240e-9262.98Elongation of fatty acids protein n=1 Tax=Hemiselm... [more]
A0A7S4JGP6_9STRA4.970e-9262.39Elongation of fatty acids protein n=2 Tax=Odontell... [more]
A0A1S7C7Q3_9STRA1.100e-9162.04Elongation of fatty acids protein n=1 Tax=Nannochl... [more]
A0A7R9WGN6_9STRA1.370e-9163.89Elongation of fatty acids protein n=1 Tax=Pseudict... [more]
W7TSM8_9STRA7.910e-9163.33Elongation of fatty acids protein n=2 Tax=Monodops... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig847contigA-nodosum_M_contig847:293692..296509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog55529.EKX33396
PFAMsELO
Model size627
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC02888,RC02997
KEGG koko:K10249
KEGG ReactionR09419,R10825
KEGG Pathwayko00062,ko01110,map00062,map01110
KEGG ModuleM00415
Hectar predicted targeting categoryother localisation
Exons6
Evalue3.15e-93
EggNOG OGsKOG3071@1|root,KOG3071@2759|Eukaryota
Ec32 ortholog descriptionFatty acid elongase
Ec32 orthologEc-19_002350.1
EC2.3.1.199
Descriptionfatty acid elongation, saturated fatty acid
Cds size627
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig847.27.1prot_A-nodosum_M_contig847.27.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig847 293692..296509 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870220.74992-CDS-A-nodosum_M_contig847:293691..2937751680870220.74992-CDS-A-nodosum_M_contig847:293691..293775Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig847 293692..293775 +
1680870220.762736-CDS-A-nodosum_M_contig847:294748..2948831680870220.762736-CDS-A-nodosum_M_contig847:294748..294883Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig847 294749..294883 +
1680870220.9346788-CDS-A-nodosum_M_contig847:295202..2952981680870220.9346788-CDS-A-nodosum_M_contig847:295202..295298Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig847 295203..295298 +
1680870221.0819657-CDS-A-nodosum_M_contig847:295740..2958931680870221.0819657-CDS-A-nodosum_M_contig847:295740..295893Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig847 295741..295893 +
1680870221.0942957-CDS-A-nodosum_M_contig847:296080..2961331680870221.0942957-CDS-A-nodosum_M_contig847:296080..296133Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig847 296081..296133 +
1680870221.1065364-CDS-A-nodosum_M_contig847:296403..2965091680870221.1065364-CDS-A-nodosum_M_contig847:296403..296509Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig847 296404..296509 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig847.27.1

>prot_A-nodosum_M_contig847.27.1 ID=prot_A-nodosum_M_contig847.27.1|Name=mRNA_A-nodosum_M_contig847.27.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=209bp
MVALGPTIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPL
LCAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHH
CTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKK
YLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKF
YVDSYTKKP
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mRNA from alignment at A-nodosum_M_contig847:293692..296509+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig847.27.1 ID=mRNA_A-nodosum_M_contig847.27.1|Name=mRNA_A-nodosum_M_contig847.27.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2818bp|location=Sequence derived from alignment at A-nodosum_M_contig847:293692..296509+ (Ascophyllum nodosum dioecious)
ATGGTGGCCCTTGGGCCGACGATCATGTCCAAGCTCCAACCGATCGACAG CTACCCCGTGCGGTTCGTCTACAACATGGTTCAGGTAACGTCCAAAGGCA AAGCTTCGGGCGTGTGTAGCGTTGATCACGTTGGGTTGGATTTATTCCGT GTTGACTATTTAATACAAATCTGCGACGTATAGTACAAGCCCCTGCACTT CCAAGTGTCCATACGATGGTTGCACACAGGCAGTTGAGACACCGTGGATG AGCTCGAGCGTAAAATGTGCTCCCCAATCACCACGACGATATGTTGCCCC ATCTGGAGTTGTTATCAACAGTCTCATTGCTCAAATGCTTTGGTATGCTG TACGAGGGACGCCAAGTTGGCAGTTTAGGTGTATACCGTGTATGTAGCGT TAAGTTGGCAATTCAAGTGTATACCGTATATGTAGTGTAGGTGTATACCG CACGTGTAGTGTAAGTGTATATACTTATACGTAGAGAAGGTGTATACCGT GTATGTAGCGTAGGTGTATATACCGTATAGCTTATAATTGTATGTATGGT CAAACATATAGCAAGAGTATGGATCAACCGGGTAAGGTTGCCAATCCTGC TCGTGGTCAGCTGAACAGGGAAAATGAATATTTCCCTGTCCCAGCCCTGC TAATCTCCATACTCAGGCTGAATCTGGTGCTTCAATACGGGATTCTTCCC GAGTTCCGCGGCGGCGTCAGTGTCCCCTCACGATTACGGGCCTGAAAGGA TGTCGGCAATTATTTTTCGACAAATGCGCCATAGCTCTCCTTAATTTGTT ATTGTCTGCTCTTTTGGAAAAATAGTTGAAGGTTGATAGGCAGGAGGTGG TATCATGATCCCCGTTGTGTGTGATATATCTGTCCCCTATACTTGGAGAA CGGCATTTGTCTCTGACGTGACCTTACTTTACCTCACCTTCGCGTGTGAC ATCCAAATACATTAAATATATTGACCCAGATTTTTTTTTCCCGTTCTGAC TTGTACTCCACTGCCGCGTGGGTATGTTTTTTGTTGTTGTCTGGTGTCGC GTCGCAGGTCATGCTCTGCTCGTACATGAGCATTGAGGCCTTTATGATCG CTTACCGCAACGAGTACCCCTTGCTCTGCGCTCCCTTCGACGCCAAGAAC CCGCCCGCCGGCAACCTGTTATGGCTGTTTTACATCTCGAAGGTGGATGC AAAATCGACGCCGCTGTGGGCGACGGTAGCACCCATCATGTAAATTTATG ACGCCGGCTGGCACAGACGATGGCAGCAAGATCTCAACAGGCCGCTCGCT GTCTGCCGCGGTTCGTTCAGAATGTCGCACACGGGATTTTCAACGGAGCG CGTTGTCATGAAAGTCACTTGACGCCCTGATTTAGACATGCTGTTTACAT TTGTCCACTGTTGTCCTCTGTGCTTGATGGTGGGTGGCCTTTTGCCACGC CCTCACCCGTTCCTTGGTGGGGGTTGCTCTCTTCTGTGTTCGTCCTCTTC CGCGCGATCAGATCCTGGACTTCATGGACACGTTGTTTATCATCCTCAAG AAGTCCTGGAGGCAGCTCTCCTTCCTCCACGTCTACCACCACTGCACCAT ATTCTTTGTGAGATCAAAATGCATGCTCATGCTCGCACAGTGTACCAGAT ACAGCTCTCATTAACAGAAGATCATGCCTTCGATACATTAGACCAAAACG TTCTTAAGGTTTCCTGCACACACTGTTGTAGCAGCAGCTATCGTCAACTA TCGTGGCTGGTGCACCCAGAGAAGACTCGGGGAACAAGCGGTTCCACCTT CTGCCGCCCGGTCGTAAGCCCTAATGTATTGCAATTAAATTCCGCTCTTG CTTTGAATCCAGGATCTCATCGCGATGGCTCACGAACATGGGCTTGCTTG CAGCACTACTAGCCTAATGAGATTACTACAGTTTGGTCGCATGCAGATAA TAATAATAATAAGGTTGCCGAAGAGAGGTGGAACTCTCGGCGTGTCATCC CTGGGCTCTAACTGCTCTAACCTCGCCCCGCCGCCATGTCCGCGAGCAGT TCTACTGGTTGAACGTGAACGCGGGATACGACGGCGACGTCTACCTGACC ATCTTGCTCAACGGTTTCATCCACACGGTCATGTACACGTACTACTTCGT CAGCATGCACACCAAGGACATCTGGTGGAAGAAGTACCTCACGCTCATGC AGGTCTGGCTTGGGCGACACCCTGCGAGGCGTTTTTCACCCTGGGACAAA CTTGTCGATAACCACGGGGTTGATTGATATTCGTGCTGTTGTGAATGTCC CAGCATTCCTGGAGTTGTCAAACGATCGTTTTCCTCTTGACGGTGGCGCC TCCAACCCCCGAAATTGTCGTGCTCCCGCCGCCACACAGATGATCCAGTT CGTGTGCATGACTTCCCAGGCAGTGTTCCTGTTGGCAACCGGGTGAGTCC CACACAGTGCTAGTGCGGTTTGTCGCCTGATGTGCCAAGGAAAGCTGCTC CGCGCCTGGTAGCAGTTCCACTCAAGGGCGTGTGACTTACAGAGTCGACC GTTGCTTGCTTGTCTCTCGGCATCCCTCCGCGCGATCTCTAGGATCCGTT TACATAGTCGCGAACCGCTGTACCGGCGGCACATGCTCTAACTCATAAAA GCCTCATTATCTTACATGGAAACCCAACCTCTTCCTACCCTCGACCGGGC GTCGTACCACAGGTGCACCAACTATCCGCCGCGTATCGTTACGGTATATG CCGGCTACATCCTCTCGCTCTTGCTTCTTTTTGCCAAGTTCTACGTGGAC AGCTACACTAAGAAGCCC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig847:293692..296509+

>mRNA_A-nodosum_M_contig847.27.1 ID=mRNA_A-nodosum_M_contig847.27.1|Name=mRNA_A-nodosum_M_contig847.27.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=627bp|location=Sequence derived from alignment at A-nodosum_M_contig847:293692..296509+ (Ascophyllum nodosum dioecious)
ATGGTGGCCCTTGGGCCGACGATCATGTCCAAGCTCCAACCGATCGACAG
CTACCCCGTGCGGTTCGTCTACAACATGGTTCAGGTCATGCTCTGCTCGT
ACATGAGCATTGAGGCCTTTATGATCGCTTACCGCAACGAGTACCCCTTG
CTCTGCGCTCCCTTCGACGCCAAGAACCCGCCCGCCGGCAACCTGTTATG
GCTGTTTTACATCTCGAAGATCCTGGACTTCATGGACACGTTGTTTATCA
TCCTCAAGAAGTCCTGGAGGCAGCTCTCCTTCCTCCACGTCTACCACCAC
TGCACCATATTCTTTTTCTACTGGTTGAACGTGAACGCGGGATACGACGG
CGACGTCTACCTGACCATCTTGCTCAACGGTTTCATCCACACGGTCATGT
ACACGTACTACTTCGTCAGCATGCACACCAAGGACATCTGGTGGAAGAAG
TACCTCACGCTCATGCAGATGATCCAGTTCGTGTGCATGACTTCCCAGGC
AGTGTTCCTGTTGGCAACCGGGTGCACCAACTATCCGCCGCGTATCGTTA
CGGTATATGCCGGCTACATCCTCTCGCTCTTGCTTCTTTTTGCCAAGTTC
TACGTGGACAGCTACACTAAGAAGCCC
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