mRNA_A-nodosum_M_contig847.27.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI) HSP 1 Score: 381 bits (978), Expect = 4.410e-133 Identity = 177/210 (84.29%), Postives = 198/210 (94.29%), Query Frame = 1
Query: 1 MVALGPTIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKKP 627
MV +GP +M+ + PIDSYPVRFVYN+VQ++LCSYM +EAFMIAYRN YP+L CAPFDA+NPPA NLLWLFY+SK+LDFMDT+FI+LKKSWRQLSFLHVYHHCTIF FYWLNVNAGYDGDVYLTI+LNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMT+QA++LL TGCT+YPPRIV VYAGYILSLL LFA+FYV+SYTKKP
Sbjct: 1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKP 210
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA) HSP 1 Score: 300 bits (767), Expect = 4.260e-100 Identity = 139/210 (66.19%), Postives = 169/210 (80.48%), Query Frame = 1
Query: 4 VALGPTIMSKLQPIDS--YPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKK 624
+ +G +M +QP+D+ YP RF+YN+VQ+MLCSYM +EA +IA+RN Y +L C PF+ +NPP GN+LWLFYISKILDF DT+FI+L+K W+QLSFLHVYHH TIF FYWLN+N GYDGD+YLTI+LNGFIHTVMYTYYFVSMHT IWWK LT MQM+QFV M SQA++LL TGCT YPPR+ Y YI SLL+LF F++ SY K
Sbjct: 52 IFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSYMPK 261
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA) HSP 1 Score: 290 bits (741), Expect = 5.490e-96 Identity = 139/195 (71.28%), Postives = 162/195 (83.08%), Query Frame = 1
Query: 43 IDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKK 624
I YPV+F+YN+VQVMLCSYM+IEA M+A+R Y L C PF+AKNPP +L++FY+SKILDFMDT FII+ K W+QLSFLHVYHH +IF FYWLN+N GYDGDVYLTI+LNGFIHTVMYTYYFVS+HTKDIWWK LT+ QMIQFV M +QA +LL TGC +YPPRIV Y YILSLL+LFA F+V SY KK
Sbjct: 76 IKLYPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLKK 270
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A0G4I034_9ALVE (Elongation of fatty acids protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I034_9ALVE) HSP 1 Score: 282 bits (721), Expect = 9.470e-93 Identity = 130/193 (67.36%), Postives = 157/193 (81.35%), Query Frame = 1
Query: 49 SYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKK 624
+YP RFVYN+ QVMLCSYM+IEA ++AYRN+Y L+ C F+ +NPP NLLW+FYISKI DF DT+FIIL K W+QLSFLHVYHH TIF YW+N+ GYDGDVYLTI+LNGFIH VMYTYYF+SMHTKDIWWK LT MQM+QF+CM QA ++L GC YPPR+ +Y YI+SL LLFA+F+V +Y+KK
Sbjct: 92 TYPFRFVYNVAQVMLCSYMTIEAVLLAYRNDYGLVPCVKFNPQNPPVANLLWMFYISKIFDFADTIFIILGKKWQQLSFLHVYHHATIFSIYWVNLRLGYDGDVYLTIVLNGFIHAVMYTYYFLSMHTKDIWWKSKLTSMQMLQFICMNVQASWMLLNGCQQYPPRLTAIYLVYIMSLFLLFAQFFVRTYSKK 284
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC) HSP 1 Score: 280 bits (717), Expect = 1.920e-92 Identity = 130/208 (62.50%), Postives = 164/208 (78.85%), Query Frame = 1
Query: 1 MVALGPTIMSKLQPID--SYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSY 615
+V +G +M + +D +YP+RFVYN++QVMLCSYM++EA ++AYR+ Y L+ C PF +NPP +LWLFYISK+LDFMDT FI+L K W QLSFLHVYHH TIF YW+NVN GYDGD+YLTI+LNGFIHTVMYTYYFVSMHTKDIWWKKYLT+MQMIQF+ M QA++LL + C +P ++ +Y YI+SL LF F++ SY
Sbjct: 58 LVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSY 265
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A6T8G4U0_HEMAN (Elongation of fatty acids protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8G4U0_HEMAN) HSP 1 Score: 280 bits (716), Expect = 2.240e-92 Identity = 131/208 (62.98%), Postives = 160/208 (76.92%), Query Frame = 1
Query: 4 VALGPTIMSKLQPID--SYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYT 618
V G +M+ P+D +YP+RF YN+VQ+MLCSYM+IEA +AYRN Y + C PFD K+PP G LLWLFY+SKILDF+DT IIL K W QLSFLHVYHH TIF YW+NVN GYDGD+YLTI+LNG IHT+MYTYYFVSMH++DIWWKKYLT+ QMIQF+CM SQA+ L+ C +P R+ Y YI++L LF KF++ SYT
Sbjct: 53 VLAGRIVMTVFHPMDRLTYPIRFCYNIVQMMLCSYMTIEAAALAYRNGYNMYPCNPFDTKSPPLGPLLWLFYVSKILDFVDTAVIILGKKWGQLSFLHVYHHATIFIMYWVNVNVGYDGDIYLTIVLNGVIHTIMYTYYFVSMHSRDIWWKKYLTMCQMIQFICMNSQAILLIKDHCKTFPARVTMTYLFYIITLFFLFLKFFITSYT 260
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A7S4JGP6_9STRA (Elongation of fatty acids protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JGP6_9STRA) HSP 1 Score: 279 bits (714), Expect = 4.970e-92 Identity = 136/218 (62.39%), Postives = 163/218 (74.77%), Query Frame = 1
Query: 4 VALGPTIM-SKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTKKP 627
V +G +M S + +D YP++F YN+ Q+MLC+YM+IE F++AYRN Y L C D KNPP NLLWLFY+SK+ DF DT+FI+L K WRQLSFLHVYHH TIF FYWLN + +DGD+YLTI+LNGFIHTVMYTYYF+ MHTKD IWWK LTLMQ+IQF+ M SQA +LL TGC R+V+VY YILSL LFA+FYV SYTKKP
Sbjct: 51 VVIGSAVMKSGVAAMDPYPIKFFYNVSQIMLCAYMTIEGFLLAYRNGYTCLPCIDIDTKNPPLANLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNAHVNFDGDIYLTIVLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSSLTLMQLIQFITMMSQATYLLVTGCQKTGLRVVSVYFVYILSLFFLFAQFYVASYTKKP 268
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A1S7C7Q3_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q3_9STRA) HSP 1 Score: 278 bits (712), Expect = 1.100e-91 Identity = 134/216 (62.04%), Postives = 162/216 (75.00%), Query Frame = 1
Query: 1 MVALGPTIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYT------KKP 627
+V +G +M QP+ Y ++F YN+ QV LCSYM IEA + AYRN Y L C PF+A NPP LLWLFY+SK+ DF DT+FIIL K W QLSFLHVYHH TIF YWLN+NAGYDGD++LT++LNG IHTVMYTYYF+SMHTKDIWWKKYLTL Q+IQF+ M +QA++LL GC + P+I +Y GYILSLL+LF FY SY+ KKP
Sbjct: 56 IVFVGSAMMKNAQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKP 271
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA) HSP 1 Score: 278 bits (711), Expect = 1.370e-91 Identity = 138/216 (63.89%), Postives = 162/216 (75.00%), Query Frame = 1
Query: 4 VALGPTIM-SKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTK 621
V +G +M S + +D YP++F+YN+ Q+MLC+YM+IEAF++AYRN Y L C D +NPP NLLWLFYISK+ DF DT+FI++ K WRQLSFLHVYHH TIF FYWLN + YDGD+YLTILLNGFIHTVMYTYYF+ MHTKD IWWK YLTLMQMIQFV M SQA +LL T C R+V VY YILSL LFA+FYV SYTK
Sbjct: 51 VVIGSAVMKSGVAAMDPYPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTK 266
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Match: W7TSM8_9STRA (Elongation of fatty acids protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM8_9STRA) HSP 1 Score: 278 bits (710), Expect = 7.910e-91 Identity = 133/210 (63.33%), Postives = 161/210 (76.67%), Query Frame = 1
Query: 4 VALGPTIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLL-CAPFDAKNPPAGNLLWLFYISKILDFMDTLFIILKKSWRQLSFLHVYHHCTIFFFYWLNVNAGYDGDVYLTILLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTSQAVFLLATGCTNYPPRIVTVYAGYILSLLLLFAKFYVDSYTK-KP 627
V +G +M QP+ Y ++F YN+ QV LCSYM IEA + AYRN Y LL C PF+ NPP G LLWLFYISKI DF DT+FIIL K W QLSFLHVYHH TIF YWLN+NAGYDGD++LT++LNG IHTVMY YYF+SMHTKDIWWKKYLTL Q+IQF+ M +QA+++L GC ++P +I +Y GYILSLL+LF FY +Y+ KP
Sbjct: 69 VFVGSIVMKDAQPVKLYGLQFFYNISQVALCSYMCIEAVIQAYRNNYTLLPCEPFNTTNPPLGPLLWLFYISKIFDFADTVFIILGKKWSQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYAYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYILGVGCKSFPTQITKLYLGYILSLLVLFLNFYFKTYSSPKP 278 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig847.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig847.27.1 >prot_A-nodosum_M_contig847.27.1 ID=prot_A-nodosum_M_contig847.27.1|Name=mRNA_A-nodosum_M_contig847.27.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=209bp MVALGPTIMSKLQPIDSYPVRFVYNMVQVMLCSYMSIEAFMIAYRNEYPLback to top mRNA from alignment at A-nodosum_M_contig847:293692..296509+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig847.27.1 ID=mRNA_A-nodosum_M_contig847.27.1|Name=mRNA_A-nodosum_M_contig847.27.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2818bp|location=Sequence derived from alignment at A-nodosum_M_contig847:293692..296509+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig847:293692..296509+ >mRNA_A-nodosum_M_contig847.27.1 ID=mRNA_A-nodosum_M_contig847.27.1|Name=mRNA_A-nodosum_M_contig847.27.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=627bp|location=Sequence derived from alignment at A-nodosum_M_contig847:293692..296509+ (Ascophyllum nodosum dioecious)back to top |