mRNA_A-nodosum_M_contig846.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 631 bits (1628), Expect = 1.800e-201 Identity = 423/1049 (40.32%), Postives = 574/1049 (54.72%), Query Frame = 2
Query: 170 CCRCTCSNETFVCGTDGFFCVDPDVLNDELTNFTETMPSL-CSGGIQTDWVVETTADVQALAEAVNCSGGNFTVEWKGTIIVDTEIVIEDGTSLKIVGAG-SGAVIDGGGITRPFRVVNASLQLNNLEARNGRATFGGAIVAMASTLIIGGTDFTGNTANEKNGGAVFVYGGSKVSFSGETIFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIXXXXXXXXXXXXXXXXXXXXXXXXTVRFGGGGAMFIEYSSNVALNGVTAFQSNSCGAEGGAVSSRALESSTSINSGNQKSSLXXXXXXXXXXXXXXXXXXGLAVLGGLSVIIMKEGNITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGTSLD-PNDGEISATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGASSVKGCTFEDNISDLGGGQAISWIGYNLDIENCSFRDNAYNCDPGTFYNESGFGERYDAVCSGCDE-CEDCFVEREGRESTCSAVLEHSTSPGGSNLTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKCSKNVWGISAAMMCSVVAVVVTFLVIKYVMSAEMGARGGILARMLRR-VPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRHGSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLLNE-SLRENTSNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLKVNVSNDSQASQKVFEVALITTHLLMVLTAIVEAILTGCSLNNGQVKHPWP 3295
CC CTC + F CG GF C+DP +L + E + CS Q WVVE +A QALA VNCSGG+F VEW+G++ +D I I GT L + G G + AVIDG G TR F V NA+L+L+ +E R+G + GGAI A +TL T F N+A NGGA+++ S VS+ G T F +XXXXXXXXXXXX XXXXXXXXXXXXXXXX ++ S ++++G TAF +N+ G GGA LA+LGGLS+ + G +F N A +AGG V +S GPTF++ F SN A+VGG V GSG ND + TF CR A++SA+G + +T F+GN+A GGAL+LAG +S+ C+F +N+SD G G A+S +G +I N +F N +NC P TF N + G+ D CSGC C+ C + CS V+ HS S GG +TL TL IDPGYWRATN ST +LACY + C GG+TG+ ++C+ GY+GPYCA+C+D Y GFTC+KC GI A +V+ + V+ YV G +A L+R +PL+++KI++VAWQI+ +FT N+ YP+ Y FL+ L+ N D+ WVLSAGC+ D+DFH + L T+GPIM +L L TY R + + TLQ+V +H S VL ++F VY+ SSV+ Q F C+ L+ G YLR DY I+CD+ KH+ V+AGFMIL+YP+GIPAF+ +L ++R VL + RE+ V S S+LW+PYRPS YYEVIEC RR +L + + + ++A QI +T+++ VVF ++SE L PY D W+ R+ HAVV +S++ ALLLKV+VSN+ +SQKVFE L+ H M+L +VE IL GC + P P
Sbjct: 85 CCECTCVDSLFSCGIAGFSCLDPSAT--DLYDCEEPPAATPCSAEAQQAWVVEDSAQAQALAANVNCSGGSFQVEWRGSVSLDAPIFIVHGTDLNVTGGGEASAVIDGNGTTRLFSVDNATLRLSGVELRSGSSAIGGAIAASGATLAFNNTSFVNNSAGS-NGGALWLTD-SSVSWGGGTEFISXXXXXXXXXXXXLNGSYVSSTXXXXXXXXXXXXXXXXVGSVASD-----------------------------------------------------------------------------SVLSPEDSTLSIDGPTAFVNNTSGENGGA----------------------------------------LALLGGLSISV-NTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTS-GDALDEACSGCQTTCDGCV--QPPVVPLCSDVIPHSRSDGGL-VTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAP 1007
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 578 bits (1489), Expect = 3.630e-181 Identity = 317/664 (47.74%), Postives = 411/664 (61.90%), Query Frame = 2
Query: 1289 LAVLGGLSVIIMKEGNITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGTSLDPND-GEISATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGASSVKGCTFEDNISDLGGGQAISWIGYNLDIENCSFRDNAYNCDPGTFYNESGFGERYDAVCSGCD-ECEDCFVEREGRESTCSAVLEHSTSPGGSNLTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKCSKNVWGISAAMMCSVVAVVVTFLVIKYVMSAEMGARG-GILARMLRRVPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRHGSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLL-NESLRENTSNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLKVNVSNDSQASQKVFEVALITTHLLMVLTAIVEAILTGCSL 3265
LA+LGGLSV I E N F N A VAGG + +S GPTF N S +SN A+VGG + + GSGTS +P D TFE+CR A+++A G N+ F+GN AG GGAL+LAG + V C+F +N+SD GGG A+S IG+ + N SF N Y C G F G Y+A+C GC ECE C E CS LEHS S GG+ +TL L I+PGYWRAT S N+L CY + C GG+TGS +C+ GY+GPYCAVC+ Y G C+KCS I+ + SV ++ T ++ Y +S E R G++ R R VPL+SVKIVIVAWQIL +FT V NI +P Y FLD L N DL WVLSAGC+ DVDFH + L T+ PI+ +L L Y A R S LQ V KH S VL + F VY S S+V+ Q F CE LDD YLR DY I+CD+ KH A V+AGFMI++Y +GIPA + L+++ VL +E+ RE + + +DLWKPYRPS YYEVIEC RR +L V + + ++A QI V +++AVVF +ISE LAPY S+ D W+CR+GHAVV +SM+ ALLLKV+VS++ +SQ+VFE L+ H+ MV ++E I+ SL
Sbjct: 296 LALLGGLSVTIGTE-NTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGT-VTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISL 957
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 584 bits (1505), Expect = 6.880e-181 Identity = 325/737 (44.10%), Postives = 443/737 (60.11%), Query Frame = 2
Query: 1103 SNVALNGVTAFQSNSCGAEGGAVSSRALESSTSINSGNQKSSLXXXXXXXXXXXXXXXXXXGLAVLGGLSVIIMKEGNITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGTSLDPNDGEIS----ATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGASSVKGCTFEDNISDLGGGQAISWIGYNLDIENCSFRDNAYNCDPGTFYNESGFGERYDAVCSGCDE-CEDCFVEREGRESTCSAVLEHSTSPGGSNLTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKCSKNVWGISAAMMCSVVAVVVTFLVIKYVMSAEMG-ARGGILARMLRRVPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRHGSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLLNESL-RENTSNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLKVNVSNDSQASQKVFEVALITTHLLMVLTAIVEAILTGCSLNNGQVKHP 3289
S + +NG TAF +N+CGA GGA LA+LGGL+V I E N++F N A VAGG V +S G GP FT A F+SN A+VGG V GSG + D IS TF+ C AI+SA G N+ F+GN AG GG L+LAG +S+ C+F DNISD GG A+S IG L +EN +F N ++CDPG + + + G Y+A C GC+ C+ CF E TC+ V+EH TS GG+ +TL L ++ GYWRA+ S + ACY + C GG+TG +C+ GY+GPYCAVC+D Y F CT+CS I+ A + +VV + V F V Y MS +G R G++AR+ + +PL+SVKIVIVAWQIL +FT V N+ YP+ Y FLD L+ N DL WVLSAGC+ D+DFH + L T+ P++ +L L GTY AV + +LQ++ KH S VL + F +Y+S S+ + + F CE L+DG YLR DY I CD+ KH+A V+AGFM++VY +GIPA +AF+L+++R VL + RE T+ S SDLWKPY+PS YYEVIEC RR +L V + + ++A QI +T+M+A F ++SEGLAP+ S+ D W+ R GH VV +SM+ ALLLKV+VS + SQ+V+E+ L+ H M+L + E + SL Q + P
Sbjct: 553 STLVMNGTTAFVNNTCGANGGA----------------------------------------LALLGGLAVNIGTE-NVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENAD--ISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEPPV-PPTCTDVMEHITSAGGT-VTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEP 1244
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 564 bits (1453), Expect = 4.860e-170 Identity = 314/729 (43.07%), Postives = 429/729 (58.85%), Query Frame = 2
Query: 1100 SSNVALNGVTAFQSNSCGAEGGAVSSRALESSTSINSGNQKSSLXXXXXXXXXXXXXXXXXXGLAVLGGLSVIIMKEGNITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGTSLDPNDGEIS--ATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGASSVKGCTFEDNISDLGGGQAISWIGYNLDIENCSFRDNAYNCDPGTFYNESGFGERYDAVCSGCDE-CEDCFVEREGRESTCSAVLEHSTSPGGSNLTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKCSKNVWGISAAMMCSVVAVVVTFLVIKYVMSAEMGARG-GILARMLRRVPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRHGSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLLNESL--RENTSNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLKVNVSNDSQASQKVFEVALITTHLLMVLTAIVEAILTGCSL 3265
+S + +NG T+F +N+CG GGAV+ +LG +++ ++ F +N A VAGG V +S G GP F N +F SN A+VGG V + GSG S D E TFE C AI+SA G +T F+ N AG GGAL+LAG +S+ C+F +N SD GG A+S IG EN SF N ++C GTF + + ++AVC+GC C C TC+ +LEHSTS G + TL TL I GYWRAT T +LACY + C GG+TG+ +C+ GY+GPYCA+C++ Y FTC CS N GI+ A +VV +V+ V+ YV S E +G GI+ R+ R +PL+SVKIV+VAWQI+ +FT V N+ YP Y FL+ L N DL W+LSAGC+ DVDFH + L T+GPI L+L TY AVR H + TL+ VR KH VL + FFVY+S S+ + + F CETL+DG YL DY I+CD+ KH+ V+AGFM+L+Y GIPA ++F+L+++R VL ++ S S SDLWKPY+PS YYEV+EC RR +L V + + +S+ QI +T+++A F LISEGLAPY S+ D WI R+GH VV+ SM+ ALLLKV+VS + +SQ VFE L+ H++MV+ + E ++ +L
Sbjct: 905 NSAILINGTTSFFNNACGGNGGAVT----------------------------------------LLGACDLVVNPAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRD-TLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALAL 1592
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 541 bits (1393), Expect = 1.210e-162 Identity = 301/709 (42.45%), Postives = 432/709 (60.93%), Query Frame = 2
Query: 1157 EGGAVSSRALESSTSINSGNQKSSLXXXXXXXXXXXXXXXXXXGLAVLGGLSVIIMKEGNITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGTSLDPNDGEISATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGASSVKGCTFEDNISDLGGGQAISWIGYNLDIENCSFRDNAYNCDPGTFYNESGFGERYDAVCSGCDE-CEDCFVEREGRESTCSAVLEHSTSPGGSNLTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKCSKN-VWGISAAMMCSVVAVVVTFLVIKYVMSAE--MGARGGILARMLRRVPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRHGSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLLNESL-RENTSNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLKVNVSNDSQASQKVFEVALITTHLLMVLTAIVEAILTGCSL 3265
+GGAV++ AL +S SI L G+A+ +++ I +++F N A VAG + +SS GP F + I GSGT G++ TF+ C+ AI SA G I N+ F+GN AG GGAL+LAG + + C+F +N SD G G A+S IG+ I N SF N ++C GTF N +G + ++A+C+GC+ C+ C C+ V++HSTS GG N+TL TL ID G+WRA+ ST +LACY + C GG+TG+ +C GY+GPYC +C+D Y F C+KCS+N GI+ A++ +++ V + V+ YV S E MG +GGI+ + R +PL+S+KIVIV+WQIL +FT V N+ YP+ Y LDVL+ N DL W+LSAGC+ D++FH + L T+ PI+ +L+L TY A R + L I+ KH + VL + FFVY+S SS + + F C+ LD YLR DY+I+C++ +HR + V+AGFMI++Y +GIPA +A +L+K+R VL +E RE VKS S+LW+PY+P+ YYEVIEC RR +L V + + ++A QI VT+++A F L+SEGLAPY S+ D WI R+GH VV LSM+ ALLLKV+VS++ +SQ+VFE L+ H+ M+L +VEA + SL
Sbjct: 797 DGGAVATNALSTSNSI--------LFINGTTIFSDNSAGGNGGGMALFVDVALNIGTV-DVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTD---ESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGG-NVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSL 1492
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 518 bits (1334), Expect = 1.540e-158 Identity = 425/1120 (37.95%), Postives = 587/1120 (52.41%), Query Frame = 2
Query: 26 LLFFSLGVQLSDSDTNVCNAADGNGAWMGDGACDPQNLISECDWDGGDCCRCTCSN------------ETFVCGTDGFFCVDPDVLN-DELTNF-TETMPSL---CSGGIQTDWVVETTADVQALAEAV-NCSGGNFTVEWKGTIIVDTEIVIEDGTSLKIVGAGSGAVIDGGGITRPFRVVNASLQLNNLEAR--NGRATFGGAIVAMASTLIIGGTDFTGNTANEKNGGAVFVYGGSKVSFSGETIFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIXXXXXXXXXXXXXXXXXXXXXXXXTVRFGGGGAMFIEYSSNVALNGVTAFQSNSCGAEGGAVSSRALESSTSINSGNQKSSLXXXXXXXXXXXXXXXXXXGLAVLGGLSVIIMKEGNITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGTSLDPNDGEISATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGAS-SVKGCTFEDNISD-LGGGQAISWIGYNLDIENCSFRDNAYNCDPGTF--YNESGFGERYDAVCSGCDECEDCFVER-EGRESTCSAVLEHSTSPGGSNLTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKCSKNVWGISAAMMCSVVAVVVTFLVIKYVMSAEMGARGGILARMLR-RVPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRHGSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLLNESLRENTSNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLKVNVSNDSQASQKVFEVALITTHLLMVLTAIVEAILTGCSLNNGQVKHPWPGKI 3304
L+ S +D+D + D N GDG CD C +DGGDCC CTC + CG + F C+DP + D L + +MPS+ C Q+ WVVE TA ALA AV NCSGGNF V+W+G + V+T + + DGTSL G+ ++ ++ +L NN E+ + R GGT + + + + VSFSG T F N XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX XXXXXXX XXXXXXXXXXXXXX XXX GG++ +++ +NG TAF N+C GGA+ + G +S+ + ++ F N A GG + IS+ GPT +F N A GG V++T SG DG TF C AI+S++G I ++ F N+A +GGAL+LAG S+K CTF+ N + + GG A+S +G +LD+ N FR N C PG+F Y ES G RY+AVC GC +D E TC+ LE++ S G N ++ +RIDPGYWRAT +T +LACY + C GG+TG +C GY GPYCA+C ++Y F CTKCS + S +AV LV V + G L +++ +V +S+KIV+V WQIL +F++V N+ YP Y FLDV++ LN D+ WV+SAGC+ D DFH LT T+GPI+++ +LG TY A R+ SD + V +KH SAVL + F VY+S SS + +MF C+ L D N YLR DY+I+C + KHRAL +FA FM+L+YP+GIP F+ +LY R L + S R+ K+ S LW+PY P R Y EV+EC RR +L V + + +SA QI +++++ F +ISE LAP+ S D W+ R GH ++ ++MF ALLLKV+VS++ + SQ++F L+ T+L++ A+ E + C++ + PW G++
Sbjct: 3 LMTISANHAQTDADYELVCENDSN-LDRGDGLCDDYLNEPLCRYDGGDCCSCTCDRSLVDSTTDDSGYDVHPCGDNLFNCIDPSAPDFDRLPVYGCGSMPSVPPRCPSEGQSQWVVEDTAGASALANAVSNCSGGNFDVDWRGHVFVNTTLWVVDGTSL----TGTAVLVQDSNLSWS----GETLFTNNTESGCIDVRXXXXXXXXXXXXXXXHGGTSSSVRSV-------ISISSAGSVSFSGRTQFVNNTASHTGGAVRVGYGAXXXXXXXXXXXXXXXXXXXXXLYVTDGNVSXXXXXXXXXXXXXXXXXXXXIDTGATVXXXXXXXXXXXXXXXXXXXIGTALEPEV------------------GGSL-----ASLVVNGSTAFVDNTCEGSGGAIKTS----------------------------------------GAVSLALE---DVVFTGNSAQSRGGALYISNTAVGPTLVGLTFTGNTAHTGGAVYVTASGVDAVFGDG-YPTTFAGCYFADNFADLSGGAIDSSSGDDSIESSDFISNKAVIGGALRLAGNDVSIKYCTFDGNAAGTVDGGPAVSNVG-DLDVWNSVFRRNYIECPPGSFVDYYESE-GGRYEAVCDGCPAADDGITMGVENLVPTCTETLENTRSDGA-NTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGEGVAVGVIFVSALAVGGAALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVKMEENGSPWSGRV 1036
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 525 bits (1353), Expect = 1.030e-157 Identity = 294/722 (40.72%), Postives = 421/722 (58.31%), Query Frame = 2
Query: 1103 SNVALNGVTAFQSNSCGAEGGAVSSRALESSTSINSGNQKSSLXXXXXXXXXXXXXXXXXXGLAVLGGLSVIIMKEGNITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGTSLDPNDGEISATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGASSVKGCTFEDNISDLGGGQAISWIGYNLDIENCSFRDNAYNCDPGTF--YNESGFGERYDAVCSGCD-ECEDCFVEREGRESTCSAVLEHSTSPGGSNLTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKCSKNVWGISAAMMCSVVAVVVTFLVIKYVMSAEMGARGG-ILARMLRRVPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRHGSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLLNESL-RENTSNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLKVNVSNDSQASQKVFEVALITTHLLMVLTAIVEAIL 3250
S++ +NG T F +N+CG GG+ LA+ S+ I +++F N A AGG V +S G GPTF++ SF+SN+A+VGG + GSG I F+ CR A++SA G ++ N+ FKGN A VGGAL+LAG +S G A+S IG + N SF N + C P F Y+ + G ++AVC GC C+ C + TCS V++H TS GG +TL TL IDPGYWRAT+ S IL CY + C GG+TG+ +C+ Y+GPYC++C+D Y G++C+KC GI A+ +V+A+ V +VI Y+MS E G R +L R+ VPL+SVKIVIV+WQIL +F N+VYP Y FLD L DL W++SAGC+ D+ FH + L T+GPI +L+L GTY A R + ++ L+I+ KH L + F VY+S SS + + F C+ L+DG YLR DY I+CD+ KH+ V+AGFMIL+YPLGIP ++ +L+K+R VL + R++++ VKS S+LW+PY+PS YYEVIEC RR +L + + + ++A Q+ +T+M+A F L+SE ++PY S+ + W+ R+GH VV +SM+ ALLLKV+VS++ SQ VFE L+T H M+L+ +VE +
Sbjct: 724 SSLVINGTTTFFNNTCGENGGS----------------------------------------LALFDACSLDI-NTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGT-FEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGG-KVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFV 1402
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 521 bits (1343), Expect = 6.790e-157 Identity = 306/695 (44.03%), Postives = 409/695 (58.85%), Query Frame = 2
Query: 1091 IEYSSNVALNGVTAFQSNSCGAEGGAVSSRALESSTSINSGNQKSSLXXXXXXXXXXXXXXXXXXGLAVLGGLSVIIMKEGNITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGTSLDPNDGEIS--ATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGASSVKGCTFEDNISDLGGGQAISWIGYNLDIENCSFRDNAYNCDPGTF--YNESGFGERYDAVCSGCDECEDCFVEREGR-ESTCSAVLEHSTSPGGSNLTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKCSKNVWGISAAMMCSVVAVVVTFLVIKYVMSAEMGARG-GILARMLRRVPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRH-GSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLLNESLRENT--SNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLK 3145
I +S + GVT F SN +GGA+ S L+S + + +S+L G+A+ GG +++I E I+F +N A V+GG V +SS G G F SF+SN A++GG V GSG S D E TF+ CR AI++A G +T F+ N AG GGAL+LAG +S+ C+F +N S+ GGG A+S IG E +F N ++C G F YNES + ++ VC GC E C +LEHSTSP G LTL L I GYWRAT S +LACY E C GG+TG+ +C+ GY+GPYCAVC+ + GFTC +CS + GI A+ +V + +V+ YV S + RG GI+ R+ +PL+SVKIV+VAWQ++ +FT V NI YP+ Y FLD L N DL W+LSAGC+ DVDFH + L T+GPI+ +++L TY A R H G++D TLQ V KH VL + FFVY+S SS + + F CETL DG YLR DY I+CD+ +H+ V+AG M+LVY +GIP + F+LY++R L + S V S SDLWKPYRPS YYEVIEC RR +L V + + +S QI +T+++A VF LISE L+PY S+ D WI R GH VV+ SM+ ALLLK
Sbjct: 675 IRNASTASWTGVTNFTSNQAFFDGGAIVSPQLDSEYNPS----ESTLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESD--DLFETVCDGCQTXXXXXAFAEPLLVPMCRDLLEHSTSPDG-KLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 529 bits (1363), Expect = 6.040e-155 Identity = 300/709 (42.31%), Postives = 426/709 (60.08%), Query Frame = 2
Query: 1289 LAVLGGLSVIIMKEGNITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGT-----SLDPNDGEISATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGASSVKGCTFEDNISDLGGGQAISWIGYNLDIENCSFRDNAYNCDPGTFYNESGFGERYDAVCSGCDE-CED--CFVEREGRESTCSAVLEHSTSPGGSN-LTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKCSKNVWGISAAMMCSVVAVVVTFLVIKYVMSAEMGARG-GILARMLRRVPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRHGSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLLNESL-RENTSNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLKVNVSNDSQASQKVFEVALITTHLLMVLTAIVEAILTGCSLNNGQVKHP----WPGKIWYRPRQFRTVSGFMVRSLPIT 3367
LA+LGG + + F N A VAGG V +S GP ++ F +N A+VGG V GSG L P + I F CR A+E+A G V + F G GGAL+LAG ++++ C+F +N+S+ GGG A+S IG ++N S+R N ++C G F + + G+ +A C GC C+D CF E C+ +EH+ S GG+N +TL LR+D G+WRAT + ++L CY C G+T S C+ GY+GPYC++C+D Y G F C++CS + GI A +VVA++V V+ YV+S ++G G + R+ R +PL+S KIV+V+WQIL +FT V N+ YP+ Y FLD L N DL WVLSAGC+ VDFH + L T+GPI+ +L L TY A R + + TLQ++ +H S VL + FVY+S SS + Q F CE+L DG YLR DY I CD+ KH+AL V+AG M++VY +GIPA + +L+++R VL RE T+ V S S+LWKPY+PS YYEVIEC RR +L V + + ++A QI +T+++A F ++SEGLAPY S+ D W+ R+GHAVV +SM+ ALLLKV+VSN+ SQ+VFEV L+ H M+L ++E ++ C+L G+ P W K +R RQ S V + ++
Sbjct: 1383 LALLGGGLHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGNLKEYAGLAPPNPTI---FTRCRFVNNQAAATGGAVETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGCF-EEPPLVPICALAMEHTGSAGGTNNITL--LRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALRFW--KALFRSRQETIPSSDDVSEVELS 2083
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 518 bits (1333), Expect = 2.230e-153 Identity = 288/648 (44.44%), Postives = 395/648 (60.96%), Query Frame = 2
Query: 1334 NITFFKNEAVVAGGGVSISSPGEGPTFTNASFMSNYAEVGGGVFITGSGTSLDPNDGEISATFEECRXXXXXXXXXXXAIESATGAAVITNTYFKGNEAGVGGALKLAGASSVKGCTFEDNISDLGGGQAISWIGYNLDIENCSFRDNAYNCDPGT---FYNESGFGERYDAVCSGCD-ECEDCFVEREGRESTCSAVLEHSTSPGGSNLTLMTLRIDPGYWRATNESTNILACYKKEVCQGGLTGSPDFCMAGYKGPYCAVCNDSYVMGPGFTCTKC-SKNVWGISAAMMCSVVAVVVTFLVIKYVMSAE--MGARGGILARMLRRVPLKSVKIVIVAWQILKKFTEVENIVYPETYSGFLDVLNFLNMDL-WVLSAGCMADVDFHTQFLTVTMGPIMIMLMLGGTYFYAVRRHGSSDNTLQIVRQKHTSAVLFIMFFVYTSASSVILQMFDCETLDDGNVYLRVDYAIKCDALKHRALMVFAGFMILVYPLGIPAFFAFILYKNRRVLLNE-SLRENTSNVKSFSDLWKPYRPSRCYYEVIECVRRFVLMTVGIVVAGDSAGQIVVTIMLAVVFTLISEGLAPYESQLDVWICRLGHAVVLLSMFFALLLKVNVSNDSQASQKVFEVALITTHLLMVLTAIVEAIL 3250
+I+F N A VAGG + +S GP FT +F SN AE+GG V + G G ++P+ G+ TF+ CR AIESA G + F+GN AG GGAL+LAGA+ C+F N +D G G A+S IGY +E+ F N ++C F +S + ++ +CSGC+ CE C + C+ V+EH+TS GG N+TL L ID GYWRAT S ++LACY E C GG+T + +C+ GY+GPYC+VC++ Y GF C+KC KN GI ++ +V +V + YV S E MG G + R+ R +PL+SVKIVI AWQIL +FT + N+ YP+ Y FL VL+ N DL W LS C D+DFH + L T+ PI +L L TYF A + +TL V+ KH S VL + FFVY+S SS++ + F CE L D +YLR DY I+CD+ KH+ V+A FMILVY +GIPA +A +L+++R +L + S R + V S +DLW+PY YYEVIEC RR +L V + + ++A QI VT+M+A F ++SE L PY+S D WI R+GH VV SMF LLLKVNVS++ ASQ+VFE+ L+ H LMV+ +VE ++
Sbjct: 956 DISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCG--IEPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSD--DPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGG-NITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVV 1598 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig846.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig846.1.1 >prot_A-nodosum_M_contig846.1.1 ID=prot_A-nodosum_M_contig846.1.1|Name=mRNA_A-nodosum_M_contig846.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1118bp MGDGACDPQNLISECDWDGGDCCRCTCSNETFVCGTDGFFCVDPDVLNDEback to top mRNA from alignment at A-nodosum_M_contig846:24221..30787- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig846.1.1 ID=mRNA_A-nodosum_M_contig846.1.1|Name=mRNA_A-nodosum_M_contig846.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6567bp|location=Sequence derived from alignment at A-nodosum_M_contig846:24221..30787- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig846:24221..30787- >mRNA_A-nodosum_M_contig846.1.1 ID=mRNA_A-nodosum_M_contig846.1.1|Name=mRNA_A-nodosum_M_contig846.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3354bp|location=Sequence derived from alignment at A-nodosum_M_contig846:24221..30787- (Ascophyllum nodosum dioecious)back to top |