mRNA_A-nodosum_M_contig8448.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig8448.1.1
Unique NamemRNA_A-nodosum_M_contig8448.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 533 bits (1373), Expect = 3.540e-184
Identity = 270/434 (62.21%), Postives = 318/434 (73.27%), Query Frame = 1
Query:   88 EDGGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP-DASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNTFKNAGSDLCYKNFKS 1386
            E  GC T+TDLY  R+ESDG + KGPI+ LDD+ + + +P  ++ KWLLT++L +  G++FYCRG++IGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+PQ  Y  GRSF+NCVSE  + E C GQ QN+ GECRMDII SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++  SDIHH YYG YSYG QGGVW NN+MHDNHQYGFDPHDDSDYLT                               +GG  A GIFLHRSSD   V+DNVVHDMQDAGMA++ES +ADI++N F++VK+GIR+SLG   N+V++N+F+  S  GLYTYQGSD P D  SDGRPSDN F  N I N   GVKI E DDTVIT N FTGTS LEF DAQ+T W  NT       +C KN  S
Sbjct:   83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHS 500          
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 520 bits (1340), Expect = 3.070e-174
Identity = 256/449 (57.02%), Postives = 314/449 (69.93%), Query Frame = 1
Query:    1 IMTIPDKCTGTKS--STRWSSGTGLNGRIYLEDGGCSTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRN 1338
            +M I   C   +   S R+++ +G+ GR+Y E  GC TMTDLY  R  E+DG + KGP+Y+LDD+   +  P+ +T  WLL ++L++  G +FYC+GT+ GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ Y+NGRSF+NCVSE  + + CEG  +N+ GECRMDII SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+  SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLTIA                             +GG+ A GIFLHRSSD   V+DN + +MQDAG+A++ESFDA I+ N     KYGIR+SLG GNN VY N F   S+YGLYTY+GSD PD S DGRPS N    N + +   GVKI E DD     NTF      EF ++ +T+WS N
Sbjct:  414 LMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860          
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 493 bits (1269), Expect = 2.810e-169
Identity = 252/443 (56.88%), Postives = 307/443 (69.30%), Query Frame = 1
Query:   88 EDGGCSTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNTFKNAGSDLCYKNFKS 1386
            E  GC T+TDLY  R  E+DG + KGP+Y+LD +   + +PTSVT KWLL ++L+V  G+IFYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ Y+ GRSF+NCVSE  + ETC+G  +ND GECRMDII SEMGY+G+FDSESYGLTWKVR         GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYG QGGVWTNN+MHDNHQY            +A                             +GG  AVGIFLHRSSD+ EVY N + +M DAG+A++ESF+ADIHDN    V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD PD S+ GRP+ N+F  N ++N+  GVK   +D+ V+T N FTGT  LEF DAQ T WS N+     S +C  N  S
Sbjct:   18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITS 443          
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 467 bits (1202), Expect = 2.160e-159
Identity = 232/419 (55.37%), Postives = 287/419 (68.50%), Query Frame = 1
Query:   88 EDGGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEY-ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNT 1341
            + GGC T++DLY  +   +    KGP+++LD ND +  + T+ TGKWLLT+DLFV  G+  YCRG  +GG+C ELRI+ST  +DF E+RGHGG+LYFE+T+VTSWD   + PQ+ YK+GRSFI CVSE    ++TC     N+ GECRMDII SEMGYLG+  SE+YG+TWKVRGFC+D SNP+VFD  NVYGD+K SDIHHMYYGMYS+G QGGVWTNN MHDNHQYGFDPHDDSDYL IA                             +GG+ A GIFLHRS D  EVY N + +M DAG+A++E+   DIHDN     ++GIR+ LG  NN V+DNVF      G++TY GSD P     GRP DN FY NTI  T TGVKI E+D+  IT N F+GT+ +EF +A D VWS N+
Sbjct:    7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNS 421          
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 6.110e-144
Identity = 207/348 (59.48%), Postives = 249/348 (71.55%), Query Frame = 1
Query:  109 MTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSK 1125
            MTDLY  R  E DG + KGP+Y+LDD+   +  P+ +T  WLL ++L++  G +FYC+GT+ GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ Y+ GRSF+NCVSE  + + CEG  +N+ GECRMDII SE+ YLG+FDSESYG+TWK        VRGFC D SNPEVFD TNVYGD+  SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLT                               +GG+ AVGIFLHRSSD   V+DN + +MQDAG+A++E+FDA I+ NT    KYGIR+SLG GNN VY N F   S+
Sbjct:    1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335          
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 6.510e-139
Identity = 231/405 (57.04%), Postives = 270/405 (66.67%), Query Frame = 1
Query:  172 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNTFKNAGSDLCYKNFKS 1386
            +LDD+ + + SPTSVT KWLL S+L+V  G+IFYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ Y+ GRSF+NCVSE  + ETC+G+ +ND GECRMDII SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYG QGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX                +GG +AVGIFLHRSSD+ EVY                                                        G       DAPD S+ GRP+ N+F  N I+NT  GVKI  +D+ VI+ N FTGT  LEF DAQ T WS N+     S +C  N  S
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTS 346          
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 6.990e-138
Identity = 228/445 (51.24%), Postives = 289/445 (64.94%), Query Frame = 1
Query:   73 GRIYLEDGGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESD--ETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSD--GRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLE---FKDAQDTVWSRNTFKNAGSDLCYKNFKS 1386
            G+ Y+  GGC+T+TD+Y ++    G    GP+++LD ND+++    S TG WLL  D+ V +GS+    G + GGD   LRIQSTGS D++E+RGHGGSL F +T VTSWDT  K    +YK  RSFI CVSE  +D  +TC+G   N  GECRMDII SEMG +G+  +ESYG++WKVRG+C++  NPEVF+ T V GDI +SDI+ MYYG YS+G  GG+WT NKMHDN QYGFDPHDDSD L IA                             +GG  AVGIFLHRSSD CEV+ N V+DM+DAGMAIMES  A IHDNTFTNVKYGIR+S+G   N V +N F +C +YG+YTYQG+D P+AS D  G   DN+F+ NT+     GVKI +A+  V T N F   S  E   F+D +D VW+ N   +   D+C K  K+
Sbjct:  398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKN 831          
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 417 bits (1072), Expect = 3.570e-137
Identity = 225/431 (52.20%), Postives = 284/431 (65.89%), Query Frame = 1
Query:   82 YLEDGGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDET--CEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDA-SSDGRPSDNSFYGNTISNTGT--GVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNT 1341
            Y E GGC T+T +Y+++ E DG     P+Y+LD+N+D++    + TG WLL  +L V+ GS     GT   GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N   ++   +GRSFINCV++++      C+G+   ++GECRMDII S MG +GWFD+ESYGLTWKVRG C          N E+F+  NVYGDI NS+I+ MYYG YSYG QGGVW +N M DN QYGFDPHDDSD LTI+                             +GG  AVGIFLHRSSD  EV+DNVV++MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N + +N+F   ++YGLYTY GSD PD  +S+GRPSDN F GNTI   G   GV I E D  V   N FTG S  EF+D+ DT W  NT
Sbjct:  192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613          
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 379 bits (973), Expect = 6.940e-120
Identity = 211/445 (47.42%), Postives = 262/445 (58.88%), Query Frame = 1
Query:   94 GGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYS---PTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDE--TCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGM------------------------AIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDAS-SDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRN 1338
            GGC+T+TD+Y ++  S      GP+Y+LD +++I+       S TG WLLTS L +L G   Y  GT+ GGD D LRIQST   DF E+RG GGSL F  T VTSWDT     + +Y+ GRSFINCV++++  +  +C G+   + GECRMDII S MG +GWFD+ESYGLTWKVRG C+D SN E+ D  NVYGDIK S+I+ MYYGMYSYG QGGVWT+N M DN  YGFDPHDDSD LTIA                               G+   GI   +  ++ E+Y                                    A+MESF A+I+DNT  N KYGIR+SLG  +N+++DN FD  S YGLYTY+GSD PD S +DGR  DNSF  NTISNT   +KI E DD   T N F      EF+D+ DTVW+ N
Sbjct:  413 GGCATLTDMYNTQSGS------GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824          
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 4.700e-119
Identity = 212/461 (45.99%), Postives = 272/461 (59.00%), Query Frame = 1
Query:   13 PDKCTGTKSSTRWSSGTGLNGRIYLED------GGCSTMTDLYKSRVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTF-TGTS---LLEFKDAQDTVWSRNTFKNAG 1356
            PD  +  + S R++   G   R+YLE       GGC+T+  +++SR        K P+Y +D D+ D+  + T   G WLLT +L+V  G      GT+ GGD DELR+ ST  T +  +R HGGSL F  T V SWDT   SP +D  +GRS+I+ VSE   + DETCEG  +N  GE RMDI  SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD  NVYG++ +SDIHH+ +G+Y+YG Q G W  NKMHDN  YGFDPHDDSD+LTI                               G   + GIFLHRSSD   V  N VHD  DAG+A++ESF+AD+ +NTF N KYG+R+S+G  +N   +N+    SKY  YTY GSD PD  S GR  +N F  N+ S     +KI EAD T    N F  G +   ++ F DA ++V   NT  + G
Sbjct:   41 PDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEG 488          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI3.540e-18462.21Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI3.070e-17457.02Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE2.810e-16956.88MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI2.160e-15955.37Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE6.110e-14459.48MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FIU4_ECTSI6.510e-13957.04Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE6.990e-13851.24MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G8D9_ECTSI3.570e-13752.20Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FWE8_ECTSI6.940e-12047.42Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FXE4_ECTSI4.700e-11945.99Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8448contigA-nodosum_M_contig8448:7327..9879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LC73
PFAMsWSC
Model size1386
Max annot lvl2759|Eukaryota
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.94e-174
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota
Descriptionprotein xylosyltransferase activity
Cds size1383
COG categoryU
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8448.1.1prot_A-nodosum_M_contig8448.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig8448 7327..9876 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870215.003253-CDS-A-nodosum_M_contig8448:7326..74421680870215.003253-CDS-A-nodosum_M_contig8448:7326..7442Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8448 7327..7442 -
1680870215.0154245-CDS-A-nodosum_M_contig8448:7668..78121680870215.0154245-CDS-A-nodosum_M_contig8448:7668..7812Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8448 7669..7812 -
1680870215.0286357-CDS-A-nodosum_M_contig8448:8026..81911680870215.0286357-CDS-A-nodosum_M_contig8448:8026..8191Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8448 8027..8191 -
1680870215.03886-CDS-A-nodosum_M_contig8448:8376..86141680870215.03886-CDS-A-nodosum_M_contig8448:8376..8614Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8448 8377..8614 -
1680870215.0488102-CDS-A-nodosum_M_contig8448:8851..94921680870215.0488102-CDS-A-nodosum_M_contig8448:8851..9492Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8448 8852..9492 -
1680870215.0590765-CDS-A-nodosum_M_contig8448:9797..98761680870215.0590765-CDS-A-nodosum_M_contig8448:9797..9876Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8448 9798..9876 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870215.0714164-UTR-A-nodosum_M_contig8448:9876..98791680870215.0714164-UTR-A-nodosum_M_contig8448:9876..9879Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig8448 9877..9879 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig8448.1.1

>prot_A-nodosum_M_contig8448.1.1 ID=prot_A-nodosum_M_contig8448.1.1|Name=mRNA_A-nodosum_M_contig8448.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=461bp
MTIPDKCTGTKSSTRWSSGTGLNGRIYLEDGGCSTMTDLYKSRVESDGWT
PKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDC
DELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSF
INCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKV
RGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMH
DNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIASKRCNNLKIYDNEVYNG
GSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVK
YGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFY
GNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNTFKNA
GSDLCYKNFKS
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mRNA from alignment at A-nodosum_M_contig8448:7327..9879-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig8448.1.1 ID=mRNA_A-nodosum_M_contig8448.1.1|Name=mRNA_A-nodosum_M_contig8448.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2553bp|location=Sequence derived from alignment at A-nodosum_M_contig8448:7327..9879- (Ascophyllum nodosum dioecious)
ATCATGACTATCCCGGATAAGTGTACTGGCACCAAGTCTTCCACCCGCTG GTCGTCCGGCACCGGGCTAAACGGTCGCATTTGTGAGTGCCTCGGTGACC TCTCCGGATGAATCCCTAACGTTCTCGCTTACATCTACCTTGCTCAGTAG TGATACCACACCAGTTAGACACTCGCGTGAGGTTTAGGAGAGAACTCGTG CAACACTACAACTTGTGTGAAGACATATTTTCCAAATTTCGTGTATCGAC GTTCATATGTTGTTTGTCTAACCCAGACCTAGAGAACGGTGGCTGCGAGA GTTTGTGTACATCAAGTTGTAGTACTCTTACGGTAATTTTTCCTCTCCAC AACGGTTACATGCCATATGCTATCATCATCCATCCAGACCTCGAGGATGG AGGCTGCAGCACCATGACCGACCTCTACAAGAGTCGCGTGGAGAGCGATG GCTGGACCCCAAAGGGCCCCATCTACATCCTCGACGACAACGACGACATC ATGTACAGTCCCACTAGCGTGACAGGCAAGTGGCTCCTCACCTCCGACCT GTTTGTCCTCAAAGGGTCCATCTTCTACTGCCGCGGTACCAATATAGGAG GCGACTGCGACGAACTGCGAATCCAGTCTACCGGCTCCACCGACTTCCAC GAGGTGCGCGGTCACGGTGGAAGCCTGTACTTCGAGAACACCCTTGTCAC CTCCTGGGACACCCCAAACAAGAGCCCGCAGGACGATTACAAGAACGGCC GCTCGTTCATCAACTGTGTGTCGGAGTATGAATCAGACGAGACGTGTGAG GGCCAACCTCAGAATGACTATGGAGAGTGCCGCATGGATATAATCGGCTC CGAGATGGGCTACCTGGGATGGTTCGACTCGGAATCGTACGGTCTAACCT GGAAGGTCCGCGGGTTTTGCGCCGACAAGAGCAACCCGGAAGTGTTCGAC ACAACGAACGTGTACGGTGACATCAAGAACTCCGATATTCACCACATGTA CTACGGCATGTATTCCTACGGCCAGCAGGTACCATGTCGACATGTAAATG ATCCTGTATGTCATAACAGCGATGTCGGTGGTATCTAACACTTCTTTTGG GCGTTTTTTTTTCTGTCCACTGCACGTAACTGAGATCACTTGTGTGTGTG CGCGCGCGTGTGTGTGTGTGTGTGTGTGACCCAGACACTCGCGCGTTAAT CATGACGATGTACATGCCTCCGACGCGGTAGTATCGTGTCGCCCCTTGTT TCCCTGACGTGGCAGGGTGGTGTGTGGACGAACAACAAGATGCATGACAA CCACCAGTACGGTTTCGACCCCCACGATGACTCCGACTACCTCACCATCG CCAACAACGAGGTCTACGACAACGTGAACCATGGCATCATCGCGTCGAAG CGTTGCAACAACCTCAAGATCTACGACAACGAGGTCTACAACGGCGGTTC GCAGGCTGTGGGCATCTTTCTCCACCGCAGCTCCGATAGCTGTGAGGTCT ACGGTGAGCCTGGGAAAACCCTTTCAGCGTCGGATTTACAGACCAAAAGC GTGAAACTTGAGACGCCTACACCGAATCGGGGGCCGTTAGGTATATTCCT CCCGTTTGAGACTGTTTACATTGAACCCTGCTGATGTATTTTCGTTTGCC TTCCCTCCTATTTGTGGATCGCCCTAATGGTGGTGTAGACAATGTCGTTC ACGACATGCAGGATGCTGGTATGGCCATCATGGAGTCTTTCGACGCCGAC ATCCACGACAACACCTTCACGAATGTCAAGTACGGCATCCGTATCAGCCT GGGCGGAGGGAACAACAATGTGTACGACAACGTGTTCGACCAATGTTCAA AGTGTGAGTACTCATCTACAGTTTATGGTAACGTTGTTTGCCCTCGTGAA CGAAATCATGTCACTTGAACGATAAATTTGCCACGAATAACGAGTCCTTC ATTTGAAGAGAACGTGCGCAAACTGCCAGTCGCTCCTAACCTCAGAACAA CTCATAATATGCCTGTTTCCCGTGGCCCTTTGTACACGCATCGTATTCCG CTCGGTTCTACTTGCAGACGGTCTATACACTTACCAGGGCTCCGACGCCC CCGATGCGTCTTCCGACGGCCGGCCTAGCGATAACAGCTTTTACGGCAAT ACCATCTCCAACACCGGAACGGGCGTCAAGATCGCAGAAGCGGACGACAC TGTCATCACCGGTGAGACTACCTGGAGTGCAGTGGACCGAATGTTACTTC TTATACAGTAGCGTATCTGATAGTTTTCCACCAGGAATACCCGTCGATTA CGAACGTTTCTGCTGTATAACTTGGGAATGTGTCGATTAATTGTGGTTAA GACGTTCTGTTCTCAGCGGTCATCCCCTCCCCCCGCCTCTGTTGGTACTG GGCTCTGGCGCTGCTTGTCCTGTCTTGCCCCGAGCAGGCAACACCTTCAC GGGGACCTCTCTTCTCGAGTTCAAAGACGCTCAGGACACGGTGTGGTCGC GCAATACATTCAAGAACGCTGGCTCAGATCTCTGCTACAAGAACTTCAAG AGT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig8448:7327..9879-

>mRNA_A-nodosum_M_contig8448.1.1 ID=mRNA_A-nodosum_M_contig8448.1.1|Name=mRNA_A-nodosum_M_contig8448.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1383bp|location=Sequence derived from alignment at A-nodosum_M_contig8448:7327..9879- (Ascophyllum nodosum dioecious)
ATGACTATCCCGGATAAGTGTACTGGCACCAAGTCTTCCACCCGCTGGTC
GTCCGGCACCGGGCTAAACGGTCGCATTTACCTCGAGGATGGAGGCTGCA
GCACCATGACCGACCTCTACAAGAGTCGCGTGGAGAGCGATGGCTGGACC
CCAAAGGGCCCCATCTACATCCTCGACGACAACGACGACATCATGTACAG
TCCCACTAGCGTGACAGGCAAGTGGCTCCTCACCTCCGACCTGTTTGTCC
TCAAAGGGTCCATCTTCTACTGCCGCGGTACCAATATAGGAGGCGACTGC
GACGAACTGCGAATCCAGTCTACCGGCTCCACCGACTTCCACGAGGTGCG
CGGTCACGGTGGAAGCCTGTACTTCGAGAACACCCTTGTCACCTCCTGGG
ACACCCCAAACAAGAGCCCGCAGGACGATTACAAGAACGGCCGCTCGTTC
ATCAACTGTGTGTCGGAGTATGAATCAGACGAGACGTGTGAGGGCCAACC
TCAGAATGACTATGGAGAGTGCCGCATGGATATAATCGGCTCCGAGATGG
GCTACCTGGGATGGTTCGACTCGGAATCGTACGGTCTAACCTGGAAGGTC
CGCGGGTTTTGCGCCGACAAGAGCAACCCGGAAGTGTTCGACACAACGAA
CGTGTACGGTGACATCAAGAACTCCGATATTCACCACATGTACTACGGCA
TGTATTCCTACGGCCAGCAGGGTGGTGTGTGGACGAACAACAAGATGCAT
GACAACCACCAGTACGGTTTCGACCCCCACGATGACTCCGACTACCTCAC
CATCGCCAACAACGAGGTCTACGACAACGTGAACCATGGCATCATCGCGT
CGAAGCGTTGCAACAACCTCAAGATCTACGACAACGAGGTCTACAACGGC
GGTTCGCAGGCTGTGGGCATCTTTCTCCACCGCAGCTCCGATAGCTGTGA
GGTCTACGACAATGTCGTTCACGACATGCAGGATGCTGGTATGGCCATCA
TGGAGTCTTTCGACGCCGACATCCACGACAACACCTTCACGAATGTCAAG
TACGGCATCCGTATCAGCCTGGGCGGAGGGAACAACAATGTGTACGACAA
CGTGTTCGACCAATGTTCAAAGTACGGTCTATACACTTACCAGGGCTCCG
ACGCCCCCGATGCGTCTTCCGACGGCCGGCCTAGCGATAACAGCTTTTAC
GGCAATACCATCTCCAACACCGGAACGGGCGTCAAGATCGCAGAAGCGGA
CGACACTGTCATCACCGGCAACACCTTCACGGGGACCTCTCTTCTCGAGT
TCAAAGACGCTCAGGACACGGTGTGGTCGCGCAATACATTCAAGAACGCT
GGCTCAGATCTCTGCTACAAGAACTTCAAGAGT
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