mRNA_A-nodosum_M_contig8448.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 533 bits (1373), Expect = 3.540e-184 Identity = 270/434 (62.21%), Postives = 318/434 (73.27%), Query Frame = 1
Query: 88 EDGGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP-DASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNTFKNAGSDLCYKNFKS 1386
E GC T+TDLY R+ESDG + KGPI+ LDD+ + + +P ++ KWLLT++L + G++FYCRG++IGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+PQ Y GRSF+NCVSE + E C GQ QN+ GECRMDII SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYG QGGVW NN+MHDNHQYGFDPHDDSDYLT +GG A GIFLHRSSD V+DNVVHDMQDAGMA++ES +ADI++N F++VK+GIR+SLG N+V++N+F+ S GLYTYQGSD P D SDGRPSDN F N I N GVKI E DDTVIT N FTGTS LEF DAQ+T W NT +C KN S
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHS 500
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 520 bits (1340), Expect = 3.070e-174 Identity = 256/449 (57.02%), Postives = 314/449 (69.93%), Query Frame = 1
Query: 1 IMTIPDKCTGTKS--STRWSSGTGLNGRIYLEDGGCSTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRN 1338
+M I C + S R+++ +G+ GR+Y E GC TMTDLY R E+DG + KGP+Y+LDD+ + P+ +T WLL ++L++ G +FYC+GT+ GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ Y+NGRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLTIA +GG+ A GIFLHRSSD V+DN + +MQDAG+A++ESFDA I+ N KYGIR+SLG GNN VY N F S+YGLYTY+GSD PD S DGRPS N N + + GVKI E DD NTF EF ++ +T+WS N
Sbjct: 414 LMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 493 bits (1269), Expect = 2.810e-169 Identity = 252/443 (56.88%), Postives = 307/443 (69.30%), Query Frame = 1
Query: 88 EDGGCSTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNTFKNAGSDLCYKNFKS 1386
E GC T+TDLY R E+DG + KGP+Y+LD + + +PTSVT KWLL ++L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ Y+ GRSF+NCVSE + ETC+G +ND GECRMDII SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYG QGGVWTNN+MHDNHQY +A +GG AVGIFLHRSSD+ EVY N + +M DAG+A++ESF+ADIHDN V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD PD S+ GRP+ N+F N ++N+ GVK +D+ V+T N FTGT LEF DAQ T WS N+ S +C N S
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITS 443
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 467 bits (1202), Expect = 2.160e-159 Identity = 232/419 (55.37%), Postives = 287/419 (68.50%), Query Frame = 1
Query: 88 EDGGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEY-ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNT 1341
+ GGC T++DLY + + KGP+++LD ND + + T+ TGKWLLT+DLFV G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE+T+VTSWD + PQ+ YK+GRSFI CVSE ++TC N+ GECRMDII SEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+G QGGVWTNN MHDNHQYGFDPHDDSDYL IA +GG+ A GIFLHRS D EVY N + +M DAG+A++E+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSD P GRP DN FY NTI T TGVKI E+D+ IT N F+GT+ +EF +A D VWS N+
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNS 421
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 424 bits (1091), Expect = 6.110e-144 Identity = 207/348 (59.48%), Postives = 249/348 (71.55%), Query Frame = 1
Query: 109 MTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSK 1125
MTDLY R E DG + KGP+Y+LDD+ + P+ +T WLL ++L++ G +FYC+GT+ GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK PQ+ Y+ GRSF+NCVSE + + CEG +N+ GECRMDII SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLT +GG+ AVGIFLHRSSD V+DN + +MQDAG+A++E+FDA I+ NT KYGIR+SLG GNN VY N F S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 412 bits (1059), Expect = 6.510e-139 Identity = 231/405 (57.04%), Postives = 270/405 (66.67%), Query Frame = 1
Query: 172 ILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNTFKNAGSDLCYKNFKS 1386
+LDD+ + + SPTSVT KWLL S+L+V G+IFYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF +T+VTSWDTPNK PQ+ Y+ GRSF+NCVSE + ETC+G+ +ND GECRMDII SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYG QGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX +GG +AVGIFLHRSSD+ EVY G DAPD S+ GRP+ N+F N I+NT GVKI +D+ VI+ N FTGT LEF DAQ T WS N+ S +C N S
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTS 346
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 426 bits (1094), Expect = 6.990e-138 Identity = 228/445 (51.24%), Postives = 289/445 (64.94%), Query Frame = 1
Query: 73 GRIYLEDGGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESD--ETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSD--GRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLE---FKDAQDTVWSRNTFKNAGSDLCYKNFKS 1386
G+ Y+ GGC+T+TD+Y ++ G GP+++LD ND+++ S TG WLL D+ V +GS+ G + GGD LRIQSTGS D++E+RGHGGSL F +T VTSWDT K +YK RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+G GG+WT NKMHDN QYGFDPHDDSD L IA +GG AVGIFLHRSSD CEV+ N V+DM+DAGMAIMES A IHDNTFTNVKYGIR+S+G N V +N F +C +YG+YTYQG+D P+AS D G DN+F+ NT+ GVKI +A+ V T N F S E F+D +D VW+ N + D+C K K+
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKN 831
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 3.570e-137 Identity = 225/431 (52.20%), Postives = 284/431 (65.89%), Query Frame = 1
Query: 82 YLEDGGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDET--CEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDA-SSDGRPSDNSFYGNTISNTGT--GVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRNT 1341
Y E GGC T+T +Y+++ E DG P+Y+LD+N+D++ + TG WLL +L V+ GS GT GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N ++ +GRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYG QGGVW +N M DN QYGFDPHDDSD LTI+ +GG AVGIFLHRSSD EV+DNVV++MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N + +N+F ++YGLYTY GSD PD +S+GRPSDN F GNTI G GV I E D V N FTG S EF+D+ DT W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 379 bits (973), Expect = 6.940e-120 Identity = 211/445 (47.42%), Postives = 262/445 (58.88%), Query Frame = 1
Query: 94 GGCSTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYS---PTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEYESDE--TCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGM------------------------AIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDAS-SDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTFTGTSLLEFKDAQDTVWSRN 1338
GGC+T+TD+Y ++ S GP+Y+LD +++I+ S TG WLLTS L +L G Y GT+ GGD D LRIQST DF E+RG GGSL F T VTSWDT + +Y+ GRSFINCV++++ + +C G+ + GECRMDII S MG +GWFD+ESYGLTWKVRG C+D SN E+ D NVYGDIK S+I+ MYYGMYSYG QGGVWT+N M DN YGFDPHDDSD LTIA G+ GI + ++ E+Y A+MESF A+I+DNT N KYGIR+SLG +N+++DN FD S YGLYTY+GSD PD S +DGR DNSF NTISNT +KI E DD T N F EF+D+ DTVW+ N
Sbjct: 413 GGCATLTDMYNTQSGS------GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 367 bits (941), Expect = 4.700e-119 Identity = 212/461 (45.99%), Postives = 272/461 (59.00%), Query Frame = 1
Query: 13 PDKCTGTKSSTRWSSGTGLNGRIYLED------GGCSTMTDLYKSRVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSDLFVLKGSIFYCRGTNIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPQDDYKNGRSFINCVSEY--ESDETCEGQPQNDYGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYGNTISNTGTGVKIAEADDTVITGNTF-TGTS---LLEFKDAQDTVWSRNTFKNAG 1356
PD + + S R++ G R+YLE GGC+T+ +++SR K P+Y +D D+ D+ + T G WLLT +L+V G GT+ GGD DELR+ ST T + +R HGGSL F T V SWDT SP +D +GRS+I+ VSE + DETCEG +N GE RMDI SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YG Q G W NKMHDN YGFDPHDDSD+LTI G + GIFLHRSSD V N VHD DAG+A++ESF+AD+ +NTF N KYG+R+S+G +N +N+ SKY YTY GSD PD S GR +N F N+ S +KI EAD T N F G + ++ F DA ++V NT + G
Sbjct: 41 PDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEG 488 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8448.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8448.1.1 >prot_A-nodosum_M_contig8448.1.1 ID=prot_A-nodosum_M_contig8448.1.1|Name=mRNA_A-nodosum_M_contig8448.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=461bp MTIPDKCTGTKSSTRWSSGTGLNGRIYLEDGGCSTMTDLYKSRVESDGWTback to top mRNA from alignment at A-nodosum_M_contig8448:7327..9879- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8448.1.1 ID=mRNA_A-nodosum_M_contig8448.1.1|Name=mRNA_A-nodosum_M_contig8448.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2553bp|location=Sequence derived from alignment at A-nodosum_M_contig8448:7327..9879- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8448:7327..9879- >mRNA_A-nodosum_M_contig8448.1.1 ID=mRNA_A-nodosum_M_contig8448.1.1|Name=mRNA_A-nodosum_M_contig8448.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1383bp|location=Sequence derived from alignment at A-nodosum_M_contig8448:7327..9879- (Ascophyllum nodosum dioecious)back to top |