mRNA_A-nodosum_M_contig8431.3.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 272 bits (696), Expect = 2.620e-74 Identity = 144/237 (60.76%), Postives = 174/237 (73.42%), Query Frame = 1
Query: 1 TFLVYSSVSSVVFQMFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEKR-QEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLAMSLRSTKK-LEDPRPRPRRSSSL 705
TF VYSSVSS +F+ FACD LD K YLRADY+IEC+S +HR +Q+YAG MI++Y VGIPALYA LLF +R VL+DE +EE + IS+LW+PYKP FYY+VIEC RR+LL G VVFIYPNTA+QIAV IA F +SE +APY SRWD W SR+GH +VF SMY ALLLKVDVS E SSQE+F +LV VH CM++ V+V+A V A SLR ++ L PR R SL
Sbjct: 1276 TFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSL 1512
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 269 bits (688), Expect = 3.190e-74 Identity = 139/226 (61.50%), Postives = 168/226 (74.34%), Query Frame = 1
Query: 1 TFLVYSSVSSVVFQMFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEKRQEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLAMSLRSTKKLEDP 675
TFLVY+SVS+V+FQ FAC++LD K+YLRADY IECDS KH A Q+YAG MI+LY VGIPALY G LF + VLR DE +E+ P +DLWKPY+P FYY+VIEC RR+LL G VVFIYPNTA+QIAVA IAV F +SEA+APY SRWD W R+GHA+V SMY ALLLKVDVS E SSQ +F +LV H CMV V+++ I+ A+SL K+ + P
Sbjct: 741 TFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQP 966
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 268 bits (684), Expect = 5.570e-73 Identity = 128/224 (57.14%), Postives = 168/224 (75.00%), Query Frame = 1
Query: 1 TFLVYSSVSSVVFQMFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEKR-QEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLAMSLRSTKKLE 669
TFL+YSSVS+ +F+ F C++L+ G +YLRADY I+CDS KH+A Q+YAG M+++Y VGIPALYA LLF +R VL+D +E++ SDLWKPYKP FYY+VIECGRR+LL G VVFI+PNTA+QIA+ +A FV VSE +AP+ S+WDAW +R GH +VF SMY ALLLKVDVSGE SQ ++ ++LV H CM++AVM + VL SL+ ++ E
Sbjct: 1020 TFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQE 1243
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 265 bits (676), Expect = 9.740e-72 Identity = 127/214 (59.35%), Postives = 166/214 (77.57%), Query Frame = 1
Query: 1 TFLVYSSVSSVVFQMFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEKR-QEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLA 639
TFLVYSSVSS +F+ FACD+L+ GK+YLR DY IECDS KH+ Q+YAG MI+LYP+GIP LY+ LLF +R VL+ +K +++S + S+LW+PYKP FYY+VIECGRRILLTG VVFIYPNTA+Q+A+ +A FF +SEA++PY SRW+ W +R+GH +V SMY ALLLKVDVS E SQ +F +LV VH CM+++V+V+ V+A
Sbjct: 1191 TFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 261 bits (667), Expect = 2.410e-71 Identity = 132/228 (57.89%), Postives = 166/228 (72.81%), Query Frame = 1
Query: 4 FLVYSSVSSVVFQMFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVL-RDEKRQEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLAMSLRSTKKLEDPRPR 684
FLVYS VSSVVFQ FACD+L+ G YLRADY IECDS KH+ ++YAG MI+LYPVGIPA Y LL +R VL +D +E+ IS+LW+PY+P +YY+VIECGRRILLTG VVFIYPNTA+QIA+ + V F +SEA+ PY WD W SR+ HA+VF S+Y ALLLKVDVS E SSQ++F +LV H CM++AV+V+ I+L R K+ ++P PR
Sbjct: 782 FLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR-VKEQDEPAPR 1008
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI) HSP 1 Score: 264 bits (674), Expect = 2.700e-71 Identity = 133/228 (58.33%), Postives = 168/228 (73.68%), Query Frame = 1
Query: 4 FLVYSSVSSVVFQMFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVL-RDEKRQEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLAMSLRSTKKLEDPRPR 684
F+VYSSVSSVVFQ FACD+L+ G YLRADY IECDS KH+ ++YAG MI+LYPVGIPA Y LLF +R VL +D +E+ IS+LW+PY+P +YY+VIECGRRILLTG VVFIYPNTA+QIA+ + V F +SEA+ PY WD W SR+ HA+VF S+Y ALLLKVDVS E SSQ++F +LV H CM++AV+V+ I+L R K+ ++P PR
Sbjct: 2520 FVVYSSVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLFRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSR-VKEQDEPAPR 2746
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 261 bits (667), Expect = 1.990e-70 Identity = 130/217 (59.91%), Postives = 161/217 (74.19%), Query Frame = 1
Query: 1 TFLVYSSVSSVVFQMFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVL-RDEKRQEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLAMSL 648
T VYSSVSS +FQ FAC+ L G++YLRADY I CDS KH+ALQ+YAG+M+++Y VGIPALY LLF +R VL R +EE+ S+LWKPYKP FYY+VIECGRR+LL G VVFIYPNTA QIA+ +A FV VSE +APY SRWD W SR+GHA+VF SMY ALLLKVDVS E SQ +F V+LV H CM++ ++++ +VL +L
Sbjct: 1831 TVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 258 bits (660), Expect = 1.490e-69 Identity = 134/219 (61.19%), Postives = 162/219 (73.97%), Query Frame = 1
Query: 1 TFLVYSSVSSVVFQMFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEK--RQEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLAMSLR 651
TFLVYSSVS+ VFQ FAC+ LD K YLRADY IECDS +H+A Q++AG+MI++YPVGIP Y LL+ +RRVL+ E +++ S +PISDLW PYKP RFYY+VIEC RR+ LTG VVFIYPNTA+Q+AV IA FV S +APY S+WDA S +GH IVF SMY ALL KVDVS E SQE+F +LV H CMVVAV+V+ IV+ S R
Sbjct: 1539 TFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYSWR 1757
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 256 bits (653), Expect = 1.070e-68 Identity = 131/236 (55.51%), Postives = 172/236 (72.88%), Query Frame = 1
Query: 1 TFLVYSSVSSVVFQMFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLRDEKR-QEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLAMSLRSTKKLEDPRPRPRRSSSL 705
TFLVYSSVSS +F+ FACD+L+ G +YLR DY IECDS KH+ Q+YAG MI+LYP+GIP LY+ LLF +R VL+ +K + +S + S+LW+PYKP FYY+VIECGRR+LLTG +VFIYPNTA+Q+A+ +A FF +SEA++PY SRW+ W +R+GH +V S+Y ALLLKVDVS E SQ +F +LV VH CM+++V+V+ V+A L K ED R RR L
Sbjct: 1251 TFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA-GLWRQKLREDVPARFRRGKFL 1484
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Match: D8LH65_ECTSI (Polymorphic outer membrane protein G/I family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH65_ECTSI) HSP 1 Score: 246 bits (628), Expect = 3.590e-68 Identity = 126/219 (57.53%), Postives = 166/219 (75.80%), Query Frame = 1
Query: 1 TFLVYSSVSSVVFQMFACDKLDTGKS-YLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAGLLFSNRRVLR-DEKRQEESHFARPISDLWKPYKPQRFYYDVIECGRRILLTGAVVFIYPNTASQIAVAFAIAVFFVFVSEAMAPYKSRWDAWTSRIGHAIVFASMYFALLLKVDVSGENHSSQEMFGVILVGVHGCMVVAVMVQAIVLAMSLR 651
TF VYS+VS+++F+ FAC++L G+S YLR+DY IECDS KH+A +I AG MI+LY VGIP LYAGL+F +R +L+ DE +E++ S LWKPY+P FYY+V ECG R+LL G VVFIYP+TA+QIAV IA FV VSE ++PY S+WD W +R+GH +VF SM+ ALLLKVDV+ E+ SSQ++F +LV H CMV+ V+++AIVL SLR
Sbjct: 463 TFFVYSNVSAILFKAFACEQL--GESIYLRSDYRIECDSPKHQAFKINAGFMIVLYTVGIPTLYAGLVFRDRHLLKKDEADREDTPRVTSTSGLWKPYRPSVFYYEVFECGWRVLLAGVVVFIYPDTAAQIAVTLMIAFAFVIVSEVLSPYSSKWDRWVNRMGHVVVFVSMFVALLLKVDVADEDASSQKVFESVLVAAHVCMVLVVVIEAIVLTSSLR 679 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8431.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8431.3.1 >prot_A-nodosum_M_contig8431.3.1 ID=prot_A-nodosum_M_contig8431.3.1|Name=mRNA_A-nodosum_M_contig8431.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=251bp MFACDKLDTGKSYLRADYAIECDSDKHRALQIYAGLMIILYPVGIPALYAback to top mRNA from alignment at A-nodosum_M_contig8431:11905..14028+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8431.3.1 ID=mRNA_A-nodosum_M_contig8431.3.1|Name=mRNA_A-nodosum_M_contig8431.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2124bp|location=Sequence derived from alignment at A-nodosum_M_contig8431:11905..14028+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8431:11905..14028+ >mRNA_A-nodosum_M_contig8431.3.1 ID=mRNA_A-nodosum_M_contig8431.3.1|Name=mRNA_A-nodosum_M_contig8431.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=753bp|location=Sequence derived from alignment at A-nodosum_M_contig8431:11905..14028+ (Ascophyllum nodosum dioecious)back to top |