mRNA_A-nodosum_M_contig8402.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: A0A6H5KZU9_9PHAE (Protein O-GlcNAc transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZU9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.330e-14 Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 3
Query: 435 QMATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMNV 557
QMAT+NVLPSVQPFHAMAYPLS AEMQQISCKYAERVKMNV
Sbjct: 557 QMATENVLPSVQPFHAMAYPLSLAEMQQISCKYAERVKMNV 597
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: A0A0W8DU52_PHYNI (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=20 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DU52_PHYNI) HSP 1 Score: 58.5 bits (140), Expect = 1.170e-6 Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 3
Query: 435 QMATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMNV 557
Q++ D+VLPSVQPFHA+ YPLS Q IS +YAER K+NV
Sbjct: 505 QLSVDDVLPSVQPFHALVYPLSMQRFQDISRRYAERAKLNV 545
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: A0A3R7HUL3_9STRA (Protein O-GlcNAc transferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A3R7HUL3_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.120e-6 Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 3
Query: 435 QMATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMNV 557
Q++ D VLPSVQPFHA+ YPLS Q IS +YAER K+NV
Sbjct: 447 QLSMDGVLPSVQPFHALVYPLSMQRFQDISRRYAERAKLNV 487
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: A0A8K1FGH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH6_PYTOL) HSP 1 Score: 57.0 bits (136), Expect = 3.890e-6 Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 3
Query: 435 QMATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMNV 557
Q+A DNVLPSVQPFHA+ YPLS IS +YAER K+NV
Sbjct: 514 QLAMDNVLPSVQPFHALVYPLSMQCFLDISRRYAERAKLNV 554
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: D0NXA5_PHYIT (Protein O-GlcNAc transferase n=2 Tax=Phytophthora TaxID=4783 RepID=D0NXA5_PHYIT) HSP 1 Score: 56.6 bits (135), Expect = 5.280e-6 Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = 3
Query: 435 QMATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMNV 557
Q++ +VLPSVQPFHA+ YPLS Q IS +YAER KMNV
Sbjct: 511 QLSVADVLPSVQPFHALVYPLSMQRFQDISRRYAERAKMNV 551
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: M4BYK0_HYAAE (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYK0_HYAAE) HSP 1 Score: 56.2 bits (134), Expect = 7.170e-6 Identity = 25/41 (60.98%), Postives = 31/41 (75.61%), Query Frame = 3
Query: 435 QMATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMNV 557
Q++ + VLPSVQPFHA+ YPLS Q IS +YAER K+NV
Sbjct: 510 QLSMEGVLPSVQPFHALVYPLSMQRFQDISRRYAERAKLNV 550
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: K3X4T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4T5_GLOUD) HSP 1 Score: 54.7 bits (130), Expect = 2.070e-5 Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 3
Query: 438 MATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMNV 557
+A D VLPSVQPFHA+ YPLS IS +YAER K+NV
Sbjct: 35 LAVDKVLPSVQPFHALVYPLSMQRFLDISRRYAERAKLNV 74
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: A0A5D6YVI5_9STRA (Protein O-GlcNAc transferase (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YVI5_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 2.250e-5 Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 3
Query: 435 QMATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMNV 557
Q+A D VLPSVQPFHA+ YPLS I+ +YAER K+NV
Sbjct: 500 QLALDRVLPSVQPFHALVYPLSLQRFLDIARRYAERAKLNV 540
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: A0A2D4BUC4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUC4_PYTIN) HSP 1 Score: 54.7 bits (130), Expect = 2.440e-5 Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 3
Query: 435 QMATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMNV 557
Q+A DN LPSVQPFHA+ YPLS + +YAER K+NV
Sbjct: 522 QLAVDNTLPSVQPFHALVYPLSMQRFLDLCRRYAERAKLNV 562
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Match: A0A6G0XEP2_9STRA (Protein O-GlcNAc transferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEP2_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 7.960e-5 Identity = 21/40 (52.50%), Postives = 33/40 (82.50%), Query Frame = 3
Query: 435 QMATDNVLPSVQPFHAMAYPLSSAEMQQISCKYAERVKMN 554
Q++TD LP+VQPFHA+ YPLS+A+ +I+ +YA+R ++N
Sbjct: 503 QLSTDGTLPTVQPFHALLYPLSAAQTLEIAKRYAQRARLN 542 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8402.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8402.1.1 >prot_A-nodosum_M_contig8402.1.1 ID=prot_A-nodosum_M_contig8402.1.1|Name=mRNA_A-nodosum_M_contig8402.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=120bp MDLSRLELNGAMEATTRVMVVDLPDPLEALPAEEVACHNDMLSVGMQPGEback to top mRNA from alignment at A-nodosum_M_contig8402:3255..8923+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8402.1.1 ID=mRNA_A-nodosum_M_contig8402.1.1|Name=mRNA_A-nodosum_M_contig8402.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5669bp|location=Sequence derived from alignment at A-nodosum_M_contig8402:3255..8923+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8402:3255..8923+ >mRNA_A-nodosum_M_contig8402.1.1 ID=mRNA_A-nodosum_M_contig8402.1.1|Name=mRNA_A-nodosum_M_contig8402.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=360bp|location=Sequence derived from alignment at A-nodosum_M_contig8402:3255..8923+ (Ascophyllum nodosum dioecious)back to top |