mRNA_A-nodosum_M_contig84.23.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: D8LQ86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ86_ECTSI) HSP 1 Score: 392 bits (1008), Expect = 6.110e-136 Identity = 193/239 (80.75%), Postives = 217/239 (90.79%), Query Frame = 1
Query: 1 MFQGQGESVVDICLKRKDRTYRPNDVLEGTLVVSTPEAWDCKAINLSYSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEGQLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILLL 717
MFQG GE VVDI LKRKDRTYRP D+LEGTLVV+TPEAWDCK++N+SYSGVYLSIGYHIS KIERG++R +LS K+EF++EVPG+A +P PFEIT ETLEYAPKRYGR RRLRPFRV+G+LH A VSTSRPLTGEVVVE SE P+KSLEVQLVRVETV QA+GQLREATEIQNLQIG+GDVCRGL IPIYMVL RLFSCPTM+ PR+RVEFELN+IVCFA++EGYTATQNFQILL+
Sbjct: 1 MFQGSGEIVVDIRLKRKDRTYRPTDILEGTLVVNTPEAWDCKSVNISYSGVYLSIGYHISAKIERGMMRNDLSKKIEFMVEVPGEAASPATEVPFEITPETLEYAPKRYGRQRRLRPFRVSGRLHSATVSTSRPLTGEVVVEESERPIKSLEVQLVRVETVSQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFAEAEGYTATQNFQILLV 239
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: A0A6H5KT71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT71_9PHAE) HSP 1 Score: 360 bits (923), Expect = 4.740e-122 Identity = 190/302 (62.91%), Postives = 217/302 (71.85%), Query Frame = 1
Query: 1 MFQGQGESVVDICLKRKDRTYRPNDVLEGTLVVSTPEAWDCKAINLS---------------------------------------------------------------YSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEGQLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILLL 717
MFQG GE +VDI LKRKDRTYRP D+LEGTLVV+TPEAWDCK++N+S YSGVYLSIGYHIS KIERG++R +LS K+EF++EVPG+A +P PFEIT ETLEYAPKRYGR RRLRPFRV+G+L+ A VSTS+PLTGEVVVE SE P+KSLEVQLVRVETV QA+GQLREATEIQNLQIG+GDVCRGL IPIYMVL RLFSCPTM+ PR+RVEFELN+IVCFA++EGYTATQNFQILL+
Sbjct: 1 MFQGSGEIIVDIRLKRKDRTYRPTDILEGTLVVNTPEAWDCKSVNISMQGNVCLFDSAERRSLFSDGPKPLALLHETINIMGAGRFPEGQTEIPFEAEVRGIDGMPLLNSYSGVYLSIGYHISAKIERGMMRNDLSKKIEFMVEVPGEAASPATEVPFEITPETLEYAPKRYGRQRRLRPFRVSGRLYSATVSTSQPLTGEVVVEESERPIKSLEVQLVRVETVSQAQGQLREATEIQNLQIGEGDVCRGLVIPIYMVLPRLFSCPTMVTPRFRVEFELNVIVCFAEAEGYTATQNFQILLV 302
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: A0A7S2FUK8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FUK8_9STRA) HSP 1 Score: 178 bits (452), Expect = 7.280e-52 Identity = 97/199 (48.74%), Postives = 135/199 (67.84%), Query Frame = 1
Query: 124 KAINLSYSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEG--QLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILL 714
+ ++ SY GVY+++ Y I+V ERG+++K L +EFI+EVP A FEIT E+LE R L ++ F+++G+L + P TGEV +E S+ P+KS+E+QLVRVETV+ + REATEIQN+QIGDGDVCR L IP+YM+ RLF+CPTM+ ++VEFE+N+IV FAD GY T+NF I+L
Sbjct: 26 EGLHESYHGVYINVEYKINVDCERGVMKKALHRSIEFIVEVPENAKHETEPERFEITPESLENV--RSNTLDQIPKFKISGRLFHKLCPINLPFTGEVTIEASQAPVKSVELQLVRVETVKHPDSGNTAREATEIQNIQIGDGDVCRNLVIPLYMIFPRLFTCPTMLTELFKVEFEVNLIVVFAD--GYMVTENFPIVL 220
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: A0A7S2MRC8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MRC8_9STRA) HSP 1 Score: 177 bits (448), Expect = 3.050e-50 Identity = 94/197 (47.72%), Postives = 132/197 (67.01%), Query Frame = 1
Query: 124 KAINLSYSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEGQLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILL 714
+ ++ SY GVY+++ Y I+V ERG +K L +EF++EVP A + FEIT E+LE L ++ F+++G+L + P TGEV +E S+ P+KS+E+QLVRVETV+Q +REATEIQN+QIGDGDVCR L +P+YM+ RLF+CPTM+ ++VEFE+N+IV F D GY T+NF I L
Sbjct: 110 EGLHESYHGVYINVEYKINVSCERGFPKKALHRNIEFVVEVPEAAKSETEPERFEITPESLENV--NASSLSKIPIFKISGRLFHKLCPINLPFTGEVTIEASQAPVKSIELQLVRVETVKQMGKTVREATEIQNIQIGDGDVCRNLVMPLYMIFPRLFTCPTMLTDSFQVEFEVNLIVVFGD--GYMVTENFPIEL 302
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: K3WEV9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEV9_GLOUD) HSP 1 Score: 174 bits (442), Expect = 1.880e-49 Identity = 108/297 (36.36%), Postives = 155/297 (52.19%), Query Frame = 1
Query: 22 SVVDICLKRKDRTYRPNDVLEGTLVVSTPEAW------------------------------------------------------------------DCKAINLSYSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEGQLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILL 714
S +DI L R DR +RP++V++G +++S+P+ + D + + +Y GVY+S+ Y I RG+++ L +EFI+EVP + P F IT ETLE ++ L + F +TG++H + P TGE+VVE + P+KS+E+QL+RVE+V AEG R+ATEIQN+QIG GDVCR LAIPIYM+ RLF+CPTM+A +++VEFE NI+V F D G T+NF I L
Sbjct: 3 STLDIKLNRIDRIFRPHEVVQGQVIISSPKGFAHQGIAMKVEGSARLQVSAKSAGLFDAFYSAVAPLQLVYLHIPIAPAGKVPFGVTKIPFEFELVGNDAQPLFETYHGVYVSVKYEIVCDCVRGIMKSNLHKTMEFIVEVPLREPLRDAPEEFSITPETLENVRRKS--LTTIPDFHITGRIHRTNCPVNLPFTGEIVVEHASSPIKSVELQLIRVESVAHAEGVARDATEIQNVQIGWGDVCRQLAIPIYMIFPRLFTCPTMLAAKFKVEFETNIVVLFED--GNMITENFPITL 295
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: A0A8K1FJJ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJJ2_PYTOL) HSP 1 Score: 174 bits (441), Expect = 2.570e-49 Identity = 104/297 (35.02%), Postives = 158/297 (53.20%), Query Frame = 1
Query: 22 SVVDICLKRKDRTYRPNDVLEGTLVVSTPEAWDCKAINL------------------------------------------------------------------SYSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEGQLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILL 714
S +DI L R DR +RP+++L+G +++S+P+ + + I++ +Y GVY+S+ Y I+ RGL++ L +EFI+EVP Q P F IT +LE +++ L + F+V+G++H + P TGE+V+E + P+KS+E+QL+RVE+V +EG R+ATEIQN+QIG GDVCR ++IPIYM+ RLF+CPTM+ PR++VEFE N++V F D G T+NF I L
Sbjct: 2 SSLDIKLNRVDRIFRPHELLQGQVLISSPKGFAHQGISMKVEGSARLQLSAKSTGLFESFYNTVTPMDLVYFHIPVAPAGKVPLGISKFPFEFELTGIDGQQLFETYHGVYVSVKYEITCSCVRGLMKSTLQKTLEFIVEVPLQEPLHDAPEEFNITPNSLENVRRKH--LSTVPTFQVSGRIHRTNCPVNLPFTGEIVIEHASAPIKSIELQLIRVESVAHSEGVARDATEIQNVQIGWGDVCREMSIPIYMIFPRLFTCPTMLTPRFKVEFETNVVVLFED--GNMITENFPITL 294
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: W2RB33_PHYPN (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=W2RB33_PHYPN) HSP 1 Score: 170 bits (431), Expect = 8.210e-48 Identity = 90/192 (46.88%), Postives = 128/192 (66.67%), Query Frame = 1
Query: 139 SYSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEGQLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILL 714
+Y GVY+S+ Y I RG+++ +L +EF++EVP + P P F IT E+LE R L + F +TGK+H + P TGE+++E ++ P+KS+E+QL+RVE+V AEG R+ATEIQN+QIG GDVCR +AIPIYM+ RLF+CPTM+ P ++VEFE N++V F + G T+NF I L
Sbjct: 108 TYHGVYVSVKYEIICDCIRGIMKNKLHKTLEFVVEVPLREPLPDSPEEFHITPESLENV--RPQSLSAMPYFHITGKVHRTNCPVNLPFTGEIIIEEAKSPIKSVELQLIRVESVAHAEGIARDATEIQNVQIGWGDVCRQMAIPIYMIFPRLFTCPTMLTPAFKVEFETNVVVLFEN--GNMITENFPITL 295
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: A0A485L3M2_9STRA (Aste57867_15679 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3M2_9STRA) HSP 1 Score: 170 bits (431), Expect = 8.210e-48 Identity = 90/192 (46.88%), Postives = 127/192 (66.15%), Query Frame = 1
Query: 139 SYSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEGQLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILL 714
+Y GVY+S+ Y I RG+++K L +EFI+EVP Q P F IT E LE R R L F +TG++H + P TGE++VE++ PLKS+E+QL+RVE+V +EG R+ATEIQN+Q+G GDVCR ++IP+YM+ RLF+CPTM+ ++V+FE+N++V F D GY T+NF I L
Sbjct: 108 TYHGVYVSVKYEIICDCPRGIMKKTLHRTLEFIVEVPLQNALPDAPEDFVITPEKLENV--RVSTTRTLPTFHITGRIHRTNCPVNLPFTGELIVESASAPLKSIELQLIRVESVTHSEGIARDATEIQNVQVGWGDVCRHVSIPLYMIFPRLFTCPTMLTAGFKVQFEVNVVVLFED--GYMITENFPIHL 295
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: A0A0W8CRJ7_PHYNI (Down syndrome critical region protein 3 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CRJ7_PHYNI) HSP 1 Score: 169 bits (429), Expect = 1.630e-47 Identity = 90/192 (46.88%), Postives = 127/192 (66.15%), Query Frame = 1
Query: 139 SYSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEGQLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILL 714
+Y GVY+S+ Y I RG+++ +L +EF++EVP P P F IT E+LE R L + F +TGK+H + P TGE+++E ++ P+KS+E+QL+RVE+V AEG R+ATEIQN+QIG GDVCR +AIPIYM+ RLF+CPTM+ P ++VEFE N++V F + G T+NF I L
Sbjct: 108 TYHGVYVSVKYEIICDCIRGIMKNKLHKTLEFVVEVPLXEPLPDSPEEFHITPESLENV--RPQSLSAMPYFHITGKVHRTNCPVNLPFTGEIIIEEAKSPIKSVELQLIRVESVAHAEGIARDATEIQNVQIGWGDVCRQMAIPIYMIFPRLFTCPTMLTPAFKVEFETNVVVLFEN--GNMITENFPITL 295
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Match: A0A1V9Z652_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z652_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.630e-47 Identity = 91/192 (47.40%), Postives = 128/192 (66.67%), Query Frame = 1
Query: 139 SYSGVYLSIGYHISVKIERGLIRKELS*KVEFILEVPGQAPTPPMGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVVETSECPLKSLEVQLVRVETVEQAEGQLREATEIQNLQIGDGDVCRGLAIPIYMVLSRLFSCPTMIAPRYRVEFELNIIVCFADSEGYTATQNFQILL 714
+Y GVY+S+ Y I V RG+++K L +EFI+EVP + P F IT + +E R +R + FR+TG++H + P TGEV VE++ PLKS+E+QL+RVE+V EG R+ATEIQN+QIG G+VC +AIPIYMV RLF+CP+M+ P ++V+FE+N++V F D GY T+NF I L
Sbjct: 108 TYHGVYVSVKYEIIVDCVRGIMKKNLHRTLEFIVEVPLRDALPDAPEDFVITPDKIENL--RTSSMRNVPMFRITGRVHRTNCPVNMPFTGEVTVESASAPLKSIELQLIRVESVVHTEGIARDATEIQNVQIGWGNVCHQVAIPIYMVFPRLFTCPSMLTPGFKVQFEVNVVVLFED--GYMITENFPIHL 295 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig84.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig84.23.1 >prot_A-nodosum_M_contig84.23.1 ID=prot_A-nodosum_M_contig84.23.1|Name=mRNA_A-nodosum_M_contig84.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=151bp MGFPFEITHETLEYAPKRYGRLRRLRPFRVTGKLHEAAVSTSRPLTGEVVback to top mRNA from alignment at A-nodosum_M_contig84:25922..31182- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig84.23.1 ID=mRNA_A-nodosum_M_contig84.23.1|Name=mRNA_A-nodosum_M_contig84.23.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5261bp|location=Sequence derived from alignment at A-nodosum_M_contig84:25922..31182- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig84:25922..31182- >mRNA_A-nodosum_M_contig84.23.1 ID=mRNA_A-nodosum_M_contig84.23.1|Name=mRNA_A-nodosum_M_contig84.23.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=453bp|location=Sequence derived from alignment at A-nodosum_M_contig84:25922..31182- (Ascophyllum nodosum dioecious)back to top |