mRNA_A-nodosum_M_contig8392.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE) HSP 1 Score: 522 bits (1345), Expect = 5.910e-162 Identity = 294/612 (48.04%), Postives = 384/612 (62.75%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYG-----GIEELKKRIFEQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSA--DGRVSYSPSNDSKDTEMLVIMRLPEECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAIC---YSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNVVDT 2482
SLM SI AG SPT+GTP +ASTVG++L Q + T VEF+DC GQVDYAGMHQ FLTRRALYLLV D+T +H +D ++ K H++IMRWLY L+LR+PG+TV+LVANKCD S+ +F E +R+++ V+ + W E R RS VT + LL ++R+SC+ G G+ L I Q +I VPPAWDLAL+VI A R +P+ ARD L L + + A F +KD+L + W +V + ++ A +SN +SAL+GALWIS+FAG LR+DG GIFLDV WLS LSPIL HKL + F L RD L G+LR +FAL +W +++ E V A+F VLIKLGV +P+G A D +PS+ S +MLVIMRL E C ++ FD K +D VTLKWE D AG PYGL+ERLIASCHV+GEVE GACWRYGA+F+SH+ + +R +K A+ Y+ SER+ T ++ G L + VW A+RYVAS M+ LSKEWPG+ W+GW DC +HP LY+ EAR+G PLL ++ D CDCL E VL L + LG V+DT
Sbjct: 85 SLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQDTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVD--DLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSIDKFAETAERIQRRVRELVAVWHEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNP-LPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPA---AMISNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQPFENRWL-WMRDDLAGDGILRREFALHIWRESVGEVVMESEEV-AEALFSVLIKLGVALPMGRRTLLAHSDRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRTLFDGLASKMPRDR--VTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGDPLLPAAAPDARR--CDCLLEPGGVLRLAVEELGPVIDT 684
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE) HSP 1 Score: 478 bits (1229), Expect = 1.240e-143 Identity = 279/620 (45.00%), Postives = 368/620 (59.35%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRR-SNRRSAKDVTTVRLLGSVNRISCKSYGGIEELKKRIFEQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVAN-----TFTTKDQLFKLWYDIVGKVSGELEG-TKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLG-GPVFSADGRVSYSPSNDSKDTEMLVIMRLPEECTGSKKNDFDQDLKKALKD------DQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVS----ERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNVVDT 2482
SL+ SI G PT GTP E STVGI+L H +GT VEFYDC GQVDY GMHQ FLTRRALYLLVWDV H +++ +V ++IMRWLY LHLR+PG+TVILVANKCD S+ +F VE+ V EW++ R S+ R D+T +L + +SC G++E+ RI Q AS++VPPAW LAL ++A R DP RD L L +R K+ A+ +F T++ L + W +V V GEL +K AVS+ D A++GALWISEFAGQ+LR+ G+FLDV WLS+ L PILDHKL + F G R+ L+ G+LR FA LW + E+ ++ A+ +V++ LGV +PL + GR + + +MLVIMRLPE C + +L++ + D D++VTL W DSAG PYGLVER+IASCH +G VE G CWRYGA+F+S RL+ F + Y + RIL++RM G L++N VWAALR+VAS++V +SK+WPG+ W GWP C R R Y +A IG LL ++ CDCL E VL L +RLG VVDT
Sbjct: 238 SLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQGTAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIEDFTGTAAVVEERVAVLRKEWRKARGFSSTRMDMDMT---VLERSSLVSCLDGVGLQEMIDRIAAQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSLG-------SRPKVGADREPGRSFFTENSLVEQWKGVVQNVEGELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVFPQH-FAGMRNELVHNGILRIAFAEHLWSDVMEITVPEE---VLDALCRVIVNLGVALPLEPASLLPGSGRALATGRPNISRQDMLVIMRLPETCGA------EHELQELISDQMRRHSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSD-RLYTFVVRYDSAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDT 836
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 456 bits (1173), Expect = 4.880e-134 Identity = 267/612 (43.63%), Postives = 354/612 (57.84%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCH-QSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYGGIEELKKRIFEQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEG-TKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTE-MLVIMRLPEECTGSKKNDFDQDLKKALKD---DQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVS----ERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNVVDT 2482
SL+ SI S T GT +E STVGI+L H Q G VEFYDC GQVDY GMHQ FLTRRALYLLVWDV+ H + N++ KV E+IM+WLY LHLR PG+ V+LVANKCD SL EF VE + +L EWQ NR+S VT + +L + +SC GG+ E+ R+ Q SI VPP+W LAL ++A R DP R L L+ + ++F T+ LF+ W D V V+GEL ++ AVS+ A++GALWISEFAG ILR+ IFLDV WLS+ L PIL HKL + F + L +D L++ GVLR FA LW+ + + E+ ++ A+ VL LGV +PLG + + ++ + MLVIMRLP+ C + + + Q+L + L + +VTLKW D AGA +GLVER+IASCH +G V G CWRYGA+F+S+ R + G L+ F I Y ER+L + M G + +WAALR+VAS++V S WPG+ W G P C H R R+Y P EARIG P+L +CDC E + L +RLG ++DT
Sbjct: 399 SLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNGRIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGAVESSARRQLQEWQ----GNRKSP-GVTKLTILQQPSLVSCDDGGGLSEVIARVDAQGATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQ----GSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESHFFPRSELTAMKDELVDNGVLRLKFAEYLWDLEMEAPPSEE---VMDALCGVLHSLGVALPLGREERHTASAIDPAAAHGQIGRQDMLVIMRLPDTCEENIQGEL-QELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADDGGLNW-LYSFVIRYDEEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRLVLERLGTIIDT 996
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 161 bits (408), Expect = 4.190e-36 Identity = 159/622 (25.56%), Postives = 263/622 (42.28%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDV--------TLFH-DLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISC-----KSYGGIEELKKRIFEQEV--------------------------------ASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFT------TKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHK-------------------LATRHFST-TALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPE---ECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEH 2317
SL +S+ G +PT G+ E STV ID+ G T+ YDC GQV Y G+ Q+FL+ RA+ LLV D+ TL H D +++K+ + WL +L R P + V++VA KCD + + R+E + L+ W S + V + V+ SC GG K++ +++ AS+ +P +W++AL+V++A +G +P+ A+ ++ L G T + T+ L W ++V + G+ +V D AL+GAL I E G ++R + +FLDV+WL+ IL P+L+H+ +H ++ LKG+ GVL A LW L++ V L LG+ PL +D ++V++RL E E G + +DF +D L ++KW++ G P G +E+++ C +G + WR+G L + + G R F + YS + + +++ G + WAAL + S + E+PG+ W CP+H
Sbjct: 299 SLRQSLRTGRPTPTSGS--EESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGMGTDAAGRIEGAIGEWLESW---------SGAGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNV-LASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGD-----GVSVVKPDHALEGALLIREHEGSLVR--HETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGH-------GVLEPSLARVLWPDGLSNY-----------VLPALDSLGLTYPL----------------DDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVL------SVKWKV-FLGVPPGAIEKMLTRCCRLGTLR--TFWRFGVLVQG---SLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQH 855
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 160 bits (404), Expect = 7.600e-36 Identity = 168/616 (27.27%), Postives = 255/616 (41.40%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLF--------HDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYG---------GIEELK--------------------KRIFEQ------EVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCET-RIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVS--NKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDSLI---------------ERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRL-PE--ECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRL 2332
SL +S++A ++PT G E STV D+ + EG++V YDC GQV Y G+ Q+FLT RA+ +LV + F +D + K+ + WL ++ R P VILVA KCD + +I R+E + L W + VRL V+ SC G G ELK R+ + + +P +WD+AL V+EA G DP+ V + G ET R + T + L W + V +G +++ V+ N +AL+GAL I EF G ++R + + IFLDV WL+ IL P+L+HK +L D+ I +GVL A +W L+ V L LG+ PL D ++V++RL P+ E G + F D AL + W++ G P G +E+++ C +G V WRYG L ++ +F + YS ++ L ++ GD+ W L YV S + + ++PG+ W G CP+H T L
Sbjct: 208 SLRQSMKANEATPT-GEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSW---------VRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETV-------DGLERSGVTVTNAKNALEGALLIREFDGSLIRYE--KFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEY-----------VLPALAFLGLTFPL----------------EDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPAL------SASWKI-FLGVPPGAIEKVLTRCCGLGGVR--TFWRYGVLVHGGLGEVHVGRR-GIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTML 767
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 159 bits (401), Expect = 2.690e-35 Identity = 167/612 (27.29%), Postives = 251/612 (41.01%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLD---------PNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYGGIEELKKRIFEQEV-----------------------------------ASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRI-KLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHK----------LATRHFSTTALKGYRD-----SLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPE---ECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSH--ERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEH 2317
SL KS++A ++PT G E STV D+ + EG+++ YDC GQV Y G+ Q+FLT RA+ ++V + F + K+ + WL ++ R P VILVA KCDS EI KR+E + L W + VRL V SC + E+ ++ Q + A + +P +WD+AL V+EA G DP+ + + L + G T K T + L W + ++G + V+N D+AL+GAL I EF G ++R + +FLDV WL+ IL P+L+HK L + L+ D L GVL A KLW L+ V + LG+ PL ND ++V++RL E G + F D AL+ W++ G P G +E+++ C +G V+ WR G L E+ G +F + YS S+ LT ++ GD+ W AL YV S + + ++PG+ G CP+H
Sbjct: 351 SLRKSMKAKEATPT-GEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASW---------VRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAG-----RDITVTNADNALEGALAIREFDGSLVR--HETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEY-----------VIPTIASLGLTFPL---------------ENDPAGG-LVVLLRLEHDRPELVGKVIDTFCLDQTPALR------ASWKI-FLGVPAGAIEKVLTRCCSLGGVQ--TFWRSGVLVHGGVGEQDRSG-----IFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQH 904
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 158 bits (399), Expect = 4.670e-35 Identity = 166/623 (26.65%), Postives = 261/623 (41.89%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPN---------NIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISC-----KSYGGI--------EE-------------------LKKRIF-----EQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLN-------ETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHK-------------------LATRHFST-TALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPE---ECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEH 2317
SL +S+ G +PT G P+E STV ID+ G T+ YDC GQV Y G+ Q+FL+ RA+ LLV D F D + ++ K+ + WL +L R P + V++VA KCD + + R+ ++ W S +T VR+ VN SC GG EE L R+ E AS+ +P +W++ L V++A +G DP+ A+ + + E R + V T+ L W D+V + E +G ++ N D AL+GAL I E G ++R + +FLDV+WL+ IL P+L+H+ +H ++ LKG+ GVL + A LW L++ V L LG+ PL +D ++V++RL E E G + +DF +D L ++KW++ G P G +E+++ C +G + WR+G L + + G + F I YS + + + G ++ WAAL Y S + E+PG+ W CP+H
Sbjct: 263 SLRQSLRTGRPTPTSG-PEE-STVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCDLAAGMAADAAARMAGGAGNWIESW---------SDAQMTAVRVEDGVNLTSCFASTPNEDGGAALGTRESPEEQSTWACDWSDGMCVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGL--TRADLSTKWNDVVAAL--EEDGV---SIVNPDHALEGALLIREHEGSLVR--HETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGH-------GVLEPELAGVLWPDGLSNY-----------VLPTLDSLGLTYPL----------------DDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVL------SVKWKI-FLGVPPGAIEKMLTRCCRLGTLR--TFWRFGVLVQG---SLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQH 819
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 148 bits (373), Expect = 4.640e-32 Identity = 175/633 (27.65%), Postives = 273/633 (43.13%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSL-TEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYG------------------GIEELKKRIF-----EQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYR-------DSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRL---PEECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNV 2473
SL +SI+ G T+G +E STV +D+ H +G + +DC GQV Y G+ Q+FLT RA+YLLVWD +++ N+ + I WL L R P A+VILV NKCD + T + VE + L+ W E R ++ + L V+ +SC + G L RI + V ++++P ++ LAL+++E + + + T +TR T+ L + W V +++ GT AA D+A+ GA+ I ++ G + ++ +FLDV W +++L P+ HK + + L G R D L E VL A LW V+ + L G+ PL SNDS +++++R+ P G K + DQ A K D + ++ G P G VERL+A C +G WRYGAL +GA++ R+F ++ YS + +ILT+ + G WAAL V S + + E+PG+ CP H +T I +AR G L+ +S C ++ A + L L V
Sbjct: 391 SLRRSIKTGKPCMTRGGGEE-STVHVDVEDHDLDGHPIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLA---IAPWLRHLTFRVPDASVILVGNKCDRVVRTRRTAVAVDVEHESRQWLESWIEIARGHQPRG-----ISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLE-------------ELASCSRSKTEQQTR-------GITRAILEEKWQAKVAEMNRA--GTSVAA---PDAAMAGAILIRKWEGGL--VEYGSYVFLDVEWFATVLDPLFCHKRDS--YGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGP-----------VLAPHLLLALKSAGLTFPL---------------SNDSNGG-LVILLRMDTKPPPDYGIKLKEKDQ----ANKFDLRLVVECSF-RLGLPPGFVERLLARCCHLGLPYP--FWRYGALIVG-----KGAEE-RMFSLSLEYSEARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLH-KTNGMKIRTKDARPGSCLVGESD------FCKLCQDRSAAVGLVAVALQVV 938
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 146 bits (368), Expect = 2.190e-31 Identity = 168/624 (26.92%), Postives = 268/624 (42.95%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRR---SAKD-VTTVRLLGSVNRISCKSYGG-----IEELKKRIF---------EQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDS-------LIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPEECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNV 2473
SL +SI G TQ E STV +D+ H+ +G + +DC GQV Y G+ Q+FLT RA+YLLVWD ++D N+ + I WL L R P A VILV NK D + + VE + L W E+ ++ S +D V+ V S +S ++GG ++ +F ++ ++ +PP++ LAL+++E +A + E T TR L W+ V +++G GT AA ++A+ GA+ I ++ G + ++ +FLDV W +++L P+ H+ + + L G R + L V A +LW L + L G+ PL P G V + ++ E + + + + KA + D +T+ S G P G VERL+A C +G WRYGAL + GA+K LF ++ YS ++IL L + G + WAAL V S M+ + E+PG+ CP+H +T+ I + R G L+++S C ++ +A + L L V
Sbjct: 556 SLRRSITTGGPCMTQNGGVE-STVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA---IAPWLRYLTFRVPDANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLE---------ELASSSRRKAEQRTRGITRADLEEK-----------WHAKVAELNGA--GTPVAA---PEAAMPGAILIRKWEGGL--VEYGNYVFLDVEWFATVLDPLFSHRRDS--YGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPH-----------LLLALKSAGLTFPL--PNDPNGGLVILLRMDTTRPPEYGIKL---------------EQVHKASEADLRLTVACSF-SLGLPPGFVERLLARCCHMGY--PFPFWRYGALIVGN-----GAEK-GLFSLSVEYSEEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQH-KTKGMPIRTTDGRPGSCLVEES------YFCQLCQDREAGIDLLAAALQVV 1102
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 139 bits (350), Expect = 2.690e-29 Identity = 160/592 (27.03%), Postives = 252/592 (42.57%), Query Frame = 2
Query: 677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRR---SAKD-VTTVRLLGSVNRISCKSYGG-----IEELKKRIF---------EQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDS-------LIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPEECTGSKKNDFDQDLKKALKDDQDVTLKWELD-SAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYL----IPPGEARI 2362
SL +SI G TQ E STV +D+ H+ +G + +DC GQV Y G+ Q+FLT RA+YLLVWD ++D N+ + I WL L R P A VILV NK D + + VE + L W E+ ++ S +D V+ V S +S ++GG ++ +F ++ ++ +PP++ LAL+++E +A + E T TR L W+ V +++G GT AA ++A+ GA+ I ++ G + ++ +FLDV W +++L P+ H+ + + L G R + L V A +LW L + L G+ PL P G V + ++ E + EE ++K D+TL S G P G VERL+A C +G WRYGAL + GA+K LF ++ YS + +L + ++G + WAAL V S M+ + E+PG+ CP+H + + PPG +
Sbjct: 463 SLRRSITTGGPCMTQNGGVE-STVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA---IAPWLRYLTFRVPNANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLE---------ELASSSRRKAEQRTRGITRADLEEK-----------WHAKVAELNGA--GTPVAA---PEAAMPGAILIRKWEGGL--VEYGNYVFLDVEWFATVLDPLFSHRRDS--YGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPH-----------LLLALKSAGLTFPL--PNDPNGGLVILLRMDTTRPPEYSIRR---EEANQARK--------------YDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYP--FWRYGALIVGN-----GAEK-GLFSLSLDYSEHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTTDAPPGSGLV 983 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8392.2.1 >prot_A-nodosum_M_contig8392.2.1 ID=prot_A-nodosum_M_contig8392.2.1|Name=mRNA_A-nodosum_M_contig8392.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=619bp MKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMback to top mRNA from alignment at A-nodosum_M_contig8392:365..6625+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8392.2.1 ID=mRNA_A-nodosum_M_contig8392.2.1|Name=mRNA_A-nodosum_M_contig8392.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6261bp|location=Sequence derived from alignment at A-nodosum_M_contig8392:365..6625+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8392:365..6625+ >mRNA_A-nodosum_M_contig8392.2.1 ID=mRNA_A-nodosum_M_contig8392.2.1|Name=mRNA_A-nodosum_M_contig8392.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1857bp|location=Sequence derived from alignment at A-nodosum_M_contig8392:365..6625+ (Ascophyllum nodosum dioecious)back to top |