mRNA_A-nodosum_M_contig8392.2.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig8392.2.1
Unique NamemRNA_A-nodosum_M_contig8392.2.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 522 bits (1345), Expect = 5.910e-162
Identity = 294/612 (48.04%), Postives = 384/612 (62.75%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYG-----GIEELKKRIFEQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSA--DGRVSYSPSNDSKDTEMLVIMRLPEECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAIC---YSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNVVDT 2482
            SLM SI AG  SPT+GTP +ASTVG++L   Q + T VEF+DC GQVDYAGMHQ FLTRRALYLLV D+T +H +D  ++ K  H++IMRWLY L+LR+PG+TV+LVANKCD S+ +F E  +R+++ V+  +  W E R    RS   VT + LL  ++R+SC+  G     G+  L   I  Q   +I VPPAWDLAL+VI A R   +P+  ARD L L       +    + A  F +KD+L + W  +V  +  ++     A +SN +SAL+GALWIS+FAG  LR+DG  GIFLDV WLS  LSPIL HKL  + F    L   RD L   G+LR +FAL +W +++     E   V   A+F VLIKLGV +P+G     A  D     +PS+ S   +MLVIMRL E C   ++  FD    K  +D   VTLKWE D AG PYGL+ERLIASCHV+GEVE GACWRYGA+F+SH+      + +R +K A+    Y+ SER+ T ++ G L +  VW A+RYVAS M+ LSKEWPG+ W+GW DC +HP   LY+    EAR+G PLL  ++ D     CDCL E   VL L  + LG V+DT
Sbjct:   85 SLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQDTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVD--DLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSIDKFAETAERIQRRVRELVAVWHEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNP-LPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPA---AMISNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQPFENRWL-WMRDDLAGDGILRREFALHIWRESVGEVVMESEEV-AEALFSVLIKLGVALPMGRRTLLAHSDRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRTLFDGLASKMPRDR--VTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGDPLLPAAAPDARR--CDCLLEPGGVLRLAVEELGPVIDT 684          
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 478 bits (1229), Expect = 1.240e-143
Identity = 279/620 (45.00%), Postives = 368/620 (59.35%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRR-SNRRSAKDVTTVRLLGSVNRISCKSYGGIEELKKRIFEQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVAN-----TFTTKDQLFKLWYDIVGKVSGELEG-TKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLG-GPVFSADGRVSYSPSNDSKDTEMLVIMRLPEECTGSKKNDFDQDLKKALKD------DQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVS----ERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNVVDT 2482
            SL+ SI  G   PT GTP E STVGI+L  H  +GT VEFYDC GQVDY GMHQ FLTRRALYLLVWDV   H    +++ +V  ++IMRWLY LHLR+PG+TVILVANKCD S+ +F      VE+ V     EW++ R  S+ R   D+T   +L   + +SC    G++E+  RI  Q  AS++VPPAW LAL  ++A R   DP    RD L L        +R K+ A+     +F T++ L + W  +V  V GEL    +K AVS+ D A++GALWISEFAGQ+LR+    G+FLDV WLS+ L PILDHKL  + F      G R+ L+  G+LR  FA  LW   +     E+   ++ A+ +V++ LGV +PL    +    GR   +   +    +MLVIMRLPE C        + +L++ + D      D++VTL W  DSAG PYGLVER+IASCH +G VE G CWRYGA+F+S           RL+ F + Y  +     RIL++RM G L++N VWAALR+VAS++V +SK+WPG+ W GWP C    R R Y     +A IG  LL  ++       CDCL  E  VL L  +RLG VVDT
Sbjct:  238 SLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQGTAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIEDFTGTAAVVEERVAVLRKEWRKARGFSSTRMDMDMT---VLERSSLVSCLDGVGLQEMIDRIAAQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSLG-------SRPKVGADREPGRSFFTENSLVEQWKGVVQNVEGELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVFPQH-FAGMRNELVHNGILRIAFAEHLWSDVMEITVPEE---VLDALCRVIVNLGVALPLEPASLLPGSGRALATGRPNISRQDMLVIMRLPETCGA------EHELQELISDQMRRHSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSD-RLYTFVVRYDSAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDT 836          
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 4.880e-134
Identity = 267/612 (43.63%), Postives = 354/612 (57.84%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCH-QSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYGGIEELKKRIFEQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEG-TKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTE-MLVIMRLPEECTGSKKNDFDQDLKKALKD---DQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVS----ERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNVVDT 2482
            SL+ SI     S T GT +E STVGI+L  H Q  G  VEFYDC GQVDY GMHQ FLTRRALYLLVWDV+  H  + N++ KV  E+IM+WLY LHLR PG+ V+LVANKCD SL EF      VE   + +L EWQ     NR+S   VT + +L   + +SC   GG+ E+  R+  Q   SI VPP+W LAL  ++A R   DP    R  L L+        +     ++F T+  LF+ W D V  V+GEL    ++ AVS+   A++GALWISEFAG ILR+     IFLDV WLS+ L PIL HKL +  F  + L   +D L++ GVLR  FA  LW+  + +   E+   ++ A+  VL  LGV +PLG         +  + ++     + MLVIMRLP+ C  + + +  Q+L + L +     +VTLKW  D AGA +GLVER+IASCH +G V  G CWRYGA+F+S+ R + G     L+ F I Y       ER+L + M G    + +WAALR+VAS++V  S  WPG+ W G P C  H R R+Y   P EARIG P+L          +CDC   E   + L  +RLG ++DT
Sbjct:  399 SLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNGRIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGAVESSARRQLQEWQ----GNRKSP-GVTKLTILQQPSLVSCDDGGGLSEVIARVDAQGATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQ----GSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESHFFPRSELTAMKDELVDNGVLRLKFAEYLWDLEMEAPPSEE---VMDALCGVLHSLGVALPLGREERHTASAIDPAAAHGQIGRQDMLVIMRLPDTCEENIQGEL-QELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADDGGLNW-LYSFVIRYDEEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRLVLERLGTIIDT 996          
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 4.190e-36
Identity = 159/622 (25.56%), Postives = 263/622 (42.28%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDV--------TLFH-DLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISC-----KSYGGIEELKKRIFEQEV--------------------------------ASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFT------TKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHK-------------------LATRHFST-TALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPE---ECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEH 2317
            SL +S+  G  +PT G+  E STV ID+      G T+  YDC GQV Y G+ Q+FL+ RA+ LLV D+        TL H D    +++K+    +  WL +L  R P + V++VA KCD +     +   R+E  +   L+ W         S   +  V +   V+  SC        GG    K++  +++                                 AS+ +P +W++AL+V++A  +G +P+  A+ ++ L   G    T +              T+  L   W ++V  + G+       +V   D AL+GAL I E  G ++R   +  +FLDV+WL+ IL P+L+H+                      +H ++   LKG+       GVL    A  LW   L++            V   L  LG+  PL                +D     ++V++RL E   E  G + +DF +D    L      ++KW++   G P G +E+++  C  +G +     WR+G L +    +  G    R F   + YS  +  + +++ G +     WAAL +  S    +  E+PG+ W     CP+H
Sbjct:  299 SLRQSLRTGRPTPTSGS--EESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGMGTDAAGRIEGAIGEWLESW---------SGAGMNAVHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNV-LASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVAALEGD-----GVSVVKPDHALEGALLIREHEGSLVR--HETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGH-------GVLEPSLARVLWPDGLSNY-----------VLPALDSLGLTYPL----------------DDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVL------SVKWKV-FLGVPPGAIEKMLTRCCRLGTLR--TFWRFGVLVQG---SLGGGIAARTFALVVEYSHDKCEVDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQH 855          
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 7.600e-36
Identity = 168/616 (27.27%), Postives = 255/616 (41.40%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLF--------HDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYG---------GIEELK--------------------KRIFEQ------EVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCET-RIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVS--NKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDSLI---------------ERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRL-PE--ECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRL 2332
            SL +S++A  ++PT G   E STV  D+   + EG++V  YDC GQV Y G+ Q+FLT RA+ +LV +   F        +D    +  K+    +  WL ++  R P   VILVA KCD +     +I  R+E   +  L  W             +  VRL   V+  SC   G         G  ELK                     R+  +          + +P +WD+AL V+EA   G DP+ V        + G   ET R +       T + L   W + V       +G +++ V+  N  +AL+GAL I EF G ++R +  + IFLDV WL+ IL P+L+HK         +L    D+ I                +GVL    A  +W   L+             V   L  LG+  PL                 D     ++V++RL P+  E  G   + F  D   AL      +  W++   G P G +E+++  C  +G V     WRYG L           ++  +F   + YS ++  L  ++ GD+     W  L YV S +  +  ++PG+ W G   CP+H  T L
Sbjct:  208 SLRQSMKANEATPT-GEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSW---------VRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETV-------DGLERSGVTVTNAKNALEGALLIREFDGSLIRYE--KFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEY-----------VLPALAFLGLTFPL----------------EDDPAKGLVVLLRLKPDRPESVGHAIDTFCLDHTPAL------SASWKI-FLGVPPGAIEKVLTRCCGLGGVR--TFWRYGVLVHGGLGEVHVGRR-GIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTML 767          
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 2.690e-35
Identity = 167/612 (27.29%), Postives = 251/612 (41.01%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLD---------PNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYGGIEELKKRIFEQEV-----------------------------------ASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRI-KLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHK----------LATRHFSTTALKGYRD-----SLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPE---ECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSH--ERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEH 2317
            SL KS++A  ++PT G   E STV  D+   + EG+++  YDC GQV Y G+ Q+FLT RA+ ++V +   F               +  K+    +  WL ++  R P   VILVA KCDS      EI KR+E   +  L  W             +  VRL   V   SC +    E+ ++    Q +                                   A + +P +WD+AL V+EA   G DP+ +  + L   + G    T   K       T + L   W +    ++G     +   V+N D+AL+GAL I EF G ++R   +  +FLDV WL+ IL P+L+HK          L     +   L+   D      L   GVL    A KLW   L+             V   +  LG+  PL                ND     ++V++RL     E  G   + F  D   AL+        W++   G P G +E+++  C  +G V+    WR G L      E+   G     +F   + YS S+  LT ++ GD+     W AL YV S +  +  ++PG+   G   CP+H
Sbjct:  351 SLRKSMKAKEATPT-GEWKEESTVFADVERMELEGSSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASW---------VRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLLHRLVNKPDGGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAAVGLAG-----RDITVTNADNALEGALAIREFDGSLVR--HETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNGLSEY-----------VIPTIASLGLTFPL---------------ENDPAGG-LVVLLRLEHDRPELVGKVIDTFCLDQTPALR------ASWKI-FLGVPAGAIEKVLTRCCSLGGVQ--TFWRSGVLVHGGVGEQDRSG-----IFAVVLEYSPSDNELTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQH 904          
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 4.670e-35
Identity = 166/623 (26.65%), Postives = 261/623 (41.89%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPN---------NIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISC-----KSYGGI--------EE-------------------LKKRIF-----EQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLN-------ETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHK-------------------LATRHFST-TALKGYRDSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPE---ECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEH 2317
            SL +S+  G  +PT G P+E STV ID+      G T+  YDC GQV Y G+ Q+FL+ RA+ LLV D   F   D +         ++ K+    +  WL +L  R P + V++VA KCD +     +   R+       ++ W         S   +T VR+   VN  SC        GG         EE                   L  R+      E   AS+ +P +W++ L V++A  +G DP+  A+  +  +       E       R + V     T+  L   W D+V  +  E +G    ++ N D AL+GAL I E  G ++R   +  +FLDV+WL+ IL P+L+H+                      +H ++   LKG+       GVL  + A  LW   L++            V   L  LG+  PL                +D     ++V++RL E   E  G + +DF +D    L      ++KW++   G P G +E+++  C  +G +     WR+G L +    +  G    + F   I YS     + + + G ++    WAAL Y  S    +  E+PG+ W     CP+H
Sbjct:  263 SLRQSLRTGRPTPTSG-PEE-STVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCDLAAGMAADAAARMAGGAGNWIESW---------SDAQMTAVRVEDGVNLTSCFASTPNEDGGAALGTRESPEEQSTWACDWSDGMCVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGL--TRADLSTKWNDVVAAL--EEDGV---SIVNPDHALEGALLIREHEGSLVR--HETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGH-------GVLEPELAGVLWPDGLSNY-----------VLPTLDSLGLTYPL----------------DDDPAEGLVVLLRLDEKRPEDVGKELDDFRRDHTAVL------SVKWKI-FLGVPPGAIEKMLTRCCRLGTLR--TFWRFGVLVQG---SLGGGMAAKTFALLIEYSHDTCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQH 819          
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 4.640e-32
Identity = 175/633 (27.65%), Postives = 273/633 (43.13%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSL-TEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTTVRLLGSVNRISCKSYG------------------GIEELKKRIF-----EQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYR-------DSLIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRL---PEECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNV 2473
            SL +SI+ G    T+G  +E STV +D+  H  +G  +  +DC GQV Y G+ Q+FLT RA+YLLVWD     +++  N+  +    I  WL  L  R P A+VILV NKCD  + T    +   VE   +  L+ W E  R ++        + L   V+ +SC + G                      L  RI      +  V ++++P ++ LAL+++E             +    + + T  +TR         T+  L + W   V +++    GT  AA    D+A+ GA+ I ++ G +  ++    +FLDV W +++L P+  HK  +  +    L G R       D L E  VL    A  LW             V+   +   L   G+  PL               SNDS    +++++R+   P    G K  + DQ    A K D  + ++      G P G VERL+A C  +G       WRYGAL        +GA++ R+F  ++ YS + +ILT+ + G       WAAL  V S  + +  E+PG+       CP H +T    I   +AR G  L+ +S        C   ++  A + L    L  V
Sbjct:  391 SLRRSIKTGKPCMTRGGGEE-STVHVDVEDHDLDGHPIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLA---IAPWLRHLTFRVPDASVILVGNKCDRVVRTRRTAVAVDVEHESRQWLESWIEIARGHQPRG-----ISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLE-------------ELASCSRSKTEQQTR-------GITRAILEEKWQAKVAEMNRA--GTSVAA---PDAAMAGAILIRKWEGGL--VEYGSYVFLDVEWFATVLDPLFCHKRDS--YGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGP-----------VLAPHLLLALKSAGLTFPL---------------SNDSNGG-LVILLRMDTKPPPDYGIKLKEKDQ----ANKFDLRLVVECSF-RLGLPPGFVERLLARCCHLGLPYP--FWRYGALIVG-----KGAEE-RMFSLSLEYSEARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLH-KTNGMKIRTKDARPGSCLVGESD------FCKLCQDRSAAVGLVAVALQVV 938          
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 2.190e-31
Identity = 168/624 (26.92%), Postives = 268/624 (42.95%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRR---SAKD-VTTVRLLGSVNRISCKSYGG-----IEELKKRIF---------EQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDS-------LIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPEECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNV 2473
            SL +SI  G    TQ    E STV +D+  H+ +G  +  +DC GQV Y G+ Q+FLT RA+YLLVWD     ++D  N+  +    I  WL  L  R P A VILV NK D  +     +   VE   +  L  W E+   ++    S +D V+ V    S   +S  ++GG      ++    +F         ++   ++ +PP++ LAL+++E          +A    +  E  T   TR  L              W+  V +++G   GT  AA    ++A+ GA+ I ++ G +  ++    +FLDV W +++L P+  H+  +  +    L G R +       L    V     A +LW   L              +   L   G+  PL  P     G V     + ++  E  + +               + + KA + D  +T+     S G P G VERL+A C  +G       WRYGAL   +     GA+K  LF  ++ YS  ++IL L + G  +    WAAL  V S M+ +  E+PG+       CP+H +T+   I   + R G  L+++S        C   ++ +A + L    L  V
Sbjct:  556 SLRRSITTGGPCMTQNGGVE-STVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA---IAPWLRYLTFRVPDANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLE---------ELASSSRRKAEQRTRGITRADLEEK-----------WHAKVAELNGA--GTPVAA---PEAAMPGAILIRKWEGGL--VEYGNYVFLDVEWFATVLDPLFSHRRDS--YGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPH-----------LLLALKSAGLTFPL--PNDPNGGLVILLRMDTTRPPEYGIKL---------------EQVHKASEADLRLTVACSF-SLGLPPGFVERLLARCCHMGY--PFPFWRYGALIVGN-----GAEK-GLFSLSVEYSEEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQH-KTKGMPIRTTDGRPGSCLVEES------YFCQLCQDREAGIDLLAAALQVV 1102          
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 2.690e-29
Identity = 160/592 (27.03%), Postives = 252/592 (42.57%), Query Frame = 2
Query:  677 SLMKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGMHQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGATVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRR---SAKD-VTTVRLLGSVNRISCKSYGG-----IEELKKRIF---------EQEVASIQVPPAWDLALKVIEAQRTGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKVSGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSSILSPILDHKLATRHFSTTALKGYRDS-------LIERGVLRWDFALKLWEQALTSAGREKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLVIMRLPEECTGSKKNDFDQDLKKALKDDQDVTLKWELD-SAGAPYGLVERLIASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERILTLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRLYL----IPPGEARI 2362
            SL +SI  G    TQ    E STV +D+  H+ +G  +  +DC GQV Y G+ Q+FLT RA+YLLVWD     ++D  N+  +    I  WL  L  R P A VILV NK D  +     +   VE   +  L  W E+   ++    S +D V+ V    S   +S  ++GG      ++    +F         ++   ++ +PP++ LAL+++E          +A    +  E  T   TR  L              W+  V +++G   GT  AA    ++A+ GA+ I ++ G +  ++    +FLDV W +++L P+  H+  +  +    L G R +       L    V     A +LW   L              +   L   G+  PL  P     G V     + ++  E  +     EE   ++K               D+TL      S G P G VERL+A C  +G       WRYGAL   +     GA+K  LF  ++ YS  + +L + ++G  +    WAAL  V S M+ +  E+PG+       CP+H    + +     PPG   +
Sbjct:  463 SLRRSITTGGPCMTQNGGVE-STVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLA---IAPWLRYLTFRVPNANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLE---------ELASSSRRKAEQRTRGITRADLEEK-----------WHAKVAELNGA--GTPVAA---PEAAMPGAILIRKWEGGL--VEYGNYVFLDVEWFATVLDPLFSHRRDS--YGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPH-----------LLLALKSAGLTFPL--PNDPNGGLVILLRMDTTRPPEYSIRR---EEANQARK--------------YDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYP--FWRYGALIVGN-----GAEK-GLFSLSLDYSEHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTTDAPPGSGLV 983          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8392.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE5.910e-16248.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW02_9PHAE1.240e-14345.00Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVX5_ECTSI4.880e-13443.63LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL98_ECTSI4.190e-3625.56LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KSZ8_9PHAE7.600e-3627.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUD0_ECTSI2.690e-3527.29LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL89_ECTSI4.670e-3526.65LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FJV1_ECTSI4.640e-3227.65LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX69_ECTSI2.190e-3126.92LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FX56_ECTSI2.690e-2927.03LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8392contigA-nodosum_M_contig8392:365..6625 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVX5
Preferred nameSLITRK2
PFAMsLRR_8
Model size5091
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000902,GO:0000904,GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0044087,GO:0044089,GO:0044425,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0061564,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0120036,GO:0120039,GO:2000026
Exons5
Evalue2.35e-144
EggNOG OGs2CMPC@1|root,2QR6C@2759|Eukaryota
Descriptionpositive regulation of synapse assembly
Cds size1857
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8392.2.1prot_A-nodosum_M_contig8392.2.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig8392 1047..3645 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870192.1925824-UTR-A-nodosum_M_contig8392:364..10461680870192.1925824-UTR-A-nodosum_M_contig8392:364..1046Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig8392 365..1046 +
1680870192.259703-UTR-A-nodosum_M_contig8392:3645..41931680870192.259703-UTR-A-nodosum_M_contig8392:3645..4193Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig8392 3646..4193 +
1680870192.2697644-UTR-A-nodosum_M_contig8392:4621..66251680870192.2697644-UTR-A-nodosum_M_contig8392:4621..6625Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig8392 4622..6625 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870192.2094872-CDS-A-nodosum_M_contig8392:1046..12861680870192.2094872-CDS-A-nodosum_M_contig8392:1046..1286Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8392 1047..1286 +
1680870192.2212205-CDS-A-nodosum_M_contig8392:1497..20841680870192.2212205-CDS-A-nodosum_M_contig8392:1497..2084Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8392 1498..2084 +
1680870192.2347844-CDS-A-nodosum_M_contig8392:2442..32861680870192.2347844-CDS-A-nodosum_M_contig8392:2442..3286Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8392 2443..3286 +
1680870192.2466483-CDS-A-nodosum_M_contig8392:3459..36451680870192.2466483-CDS-A-nodosum_M_contig8392:3459..3645Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8392 3460..3645 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig8392.2.1

>prot_A-nodosum_M_contig8392.2.1 ID=prot_A-nodosum_M_contig8392.2.1|Name=mRNA_A-nodosum_M_contig8392.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=619bp
MKSIEAGYSSPTQGTPDEASTVGIDLHCHQSEGTTVEFYDCGGQVDYAGM
HQVFLTRRALYLLVWDVTLFHDLDPNNIAKVTHENIMRWLYTLHLRSPGA
TVILVANKCDSSLTEFEEITKRVEQLVKCELDEWQERRRSNRRSAKDVTT
VRLLGSVNRISCKSYGGIEELKKRIFEQEVASIQVPPAWDLALKVIEAQR
TGGDPLHVARDHLKLNETGTTCETRIKLVANTFTTKDQLFKLWYDIVGKV
SGELEGTKKAAVSNKDSALDGALWISEFAGQILRIDGDQGIFLDVSWLSS
ILSPILDHKLATRHFSTTALKGYRDSLIERGVLRWDFALKLWEQALTSAG
REKRRVMVGAVFQVLIKLGVIIPLGGPVFSADGRVSYSPSNDSKDTEMLV
IMRLPEECTGSKKNDFDQDLKKALKDDQDVTLKWELDSAGAPYGLVERLI
ASCHVIGEVEQGACWRYGALFKSHERTERGAKKIRLFKFAICYSVSERIL
TLRMIGDLKNNLVWAALRYVASTMVTLSKEWPGMEWSGWPDCPEHPRTRL
YLIPPGEARIGGPLLDQSSRDQYMVLCDCLEEEDAVLWLFRKRLGNVVDT
TGVNVDIGFFLYLCCETF*
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mRNA from alignment at A-nodosum_M_contig8392:365..6625+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig8392.2.1 ID=mRNA_A-nodosum_M_contig8392.2.1|Name=mRNA_A-nodosum_M_contig8392.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6261bp|location=Sequence derived from alignment at A-nodosum_M_contig8392:365..6625+ (Ascophyllum nodosum dioecious)
AATTATGCTATTATTAAGTCATTGGATTGACAAGCTGCAACAAAGATCAT TATCCTCGCAGATCCTCTGGTGTGCTCCAACCAGAGGCAGCAGTCCTTGA AGAAAATGTTGTGTTGCAGTCGCTCAAGGTTATACCGGCACCATTAAACA GCTTCACCATCAAAATGCCACAAGACGCTGCACGCAATGCTTTTGGGGTT TATCACAGCAACAGCAGATATTCATCAGGAACTTAAATTAGCCTCCACAT TATTTGTGGGTCCTTCTAAAAATACACCAGTGTTCCTTCTGTAGTTCGCA GTTCCTCACAAGTTTGCAATGACAACACACCACTCTACACAAATTTAGGC ATGGGGAGCATCACGTCGTCTAAACGAAGAGGAGTGTTTCCCATATTTGT ACACAAGTGTCTCTCGATGTACCATTGTTGGGCAACTTTCGGAACATCCT GTAACTGCGTACTAGAGGGTTAGCTCTAGAGGCGACAGATGGTGCGGATA GGATTTCCTCGAAAAAACTACGTAGTAAGCCTTCGTCCAAATTTTAAAAA TACGTTTTTTCAGGAGGGGTGACGAGTTCCGAAGTTGGCAGCACTGTGAC AAATTCAAGTCTTGTGTAATCACTACGGGACATGTGTATTCATCTTGCCT CTTGATCAATAATGATCTAATACCATAGCTTGATGAAGAGCATCGAGGCG GGATACAGCTCTCCGACTCAAGGTACCCCGGACGAAGCAAGCACGGTCGG CATTGATCTGCACTGCCACCAGTCCGAGGGAACTACAGTCGAGTTCTACG ACTGCGGAGGCCAAGTGGACTACGCTGGAATGCACCAAGTATTTCTGACT CGACGAGCTCTGTATCTGTTAGTGTGGGACGTGACACTATTCCACGACCT CGACCCAAATAATATAGCCAAGGTGGGTGCTTGGCGTTTTGCCGTGAGGC GATGGTGGCGGTCTTAGCACTTGTACGTAGCAGAACACCAATGGTTCGCC CGTGGGTGTATTCGCCCTGATCTTGGATGAAAACATGCCACGAGCGATGA TCTAGAAACTCTACACCTCTGACCTTGCAAGTCTGAGTTTGTCCGCCCAT ATACTTTTGCCTCGATGATGCCTGGGATTGCAGGTCACCCACGAGAACAT AATGAGATGGCTGTACACCCTCCATCTTCGTTCACCAGGGGCCACGGTGA TACTAGTGGCCAACAAGTGTGACTCGTCCTTGACTGAGTTCGAAGAGATT ACGAAAAGGGTTGAACAGCTTGTGAAGTGCGAGTTAGACGAGTGGCAGGA ACGTCGACGCTCGAACCGCCGCTCCGCCAAAGATGTGACGACGGTAAGGC TACTAGGCAGTGTAAATCGAATCAGCTGCAAGAGTTACGGTGGAATCGAG GAGCTTAAAAAGCGTATCTTCGAACAAGAGGTCGCGTCAATCCAGGTTCC ACCCGCGTGGGATCTCGCTCTAAAGGTTATTGAAGCACAGCGGACCGGTG GCGACCCTTTACACGTTGCCCGGGACCATCTGAAGTTGAACGAGACGGGG ACAACATGCGAAACAAGAATTAAACTTGTGGCAAACACGTTCACAACAAA GGACCAGTTGTTCAAGTTGTGGTATGACATCGTTGGTAAAGTTTCTGGAG AGTTAGAGGGTACGAAGAAGGCAGCGGTTTCCAACAAGGACAGTGCTCTC GATGGTGCACTATGGATCAGGTAGAGCCATTTAAATTACTTTTGTTATCA CTTTGCCAACGACCTCGTTTTGGTCGTACCATGTTTTCTCCAATAGAACG CTTAACGTCGGACTTAGCACGCTTTGATTTAAAATTCCGATTGTCGACGA AATGTTTTGCATATATACCTAGCGTCGTCTTGGTTGATTTTGATGCAAAG TCGCCGCATGAGAGATCATCATGCGTTGTTATTGGTCAGTTTGATCATTA TAATAAGAGTTTGTCTGATCTGGTGTAATTTGGCAGACGCCGCTGGTAGA AGTTTCCATACTTGTTCCGATAACCCGATTGCTGGCTTTCTCTTGAGTGC GCTTGTTGTATGTCGTGCTTATTTcCAGTGAATTCGCAGGGCAGATCCTC CGCATCGATGGCGATCAAGGCATCTTCCTAGACGTGAGCTGGCTCTCCAG TATTTTGAGTCCCATCTTGGACCACAAGCTCGCTACGAGACATTTCTCGA CTACCGCGCTCAAAGGTTACAGAGATAGCCTCATTGAGCGCGGTGTTCTC CGTTGGGACTTTGCCCTAAAGCTCTGGGAACAGGCCCTGACATCAGCCGG ACGGGAGAAGAGGAGGGTCATGGTGGGTGCTGTATTCCAGGTTCTCATTA AGCTTGGCGTGATCATTCCTCTAGGAGGGCCGGTCTTCTCAGCAGATGGC AGGGTATCCTACTCGCCATCTAATGACTCGAAAGATACTGAGATGTTGGT GATCATGCGTCTACCCGAGGAATGTACTGGTTCAAAAAAAAATGATTTCG ATCAAGATTTAAAGAAGGCTCTCAAGGACGATCAGGACGTAACACTGAAA TGGGAGTTGGACTCGGCGGGGGCTCCGTATGGATTGGTGGAGCGACTGAT AGCTTCGTGCCATGTCATTGGCGAAGTAGAGCAGGGGGCGTGTTGGAGGT ACGGGGCGTTGTTTAAGAGTCATGAGCGGACGGAGAGGGGTGCAAAGAAG ATTCGATTGTTCAAGTTCGCCATCTGCTACAGCGTTAGTGAGCGGATTTT GACGCTGAGGATGATTGGTGACCTCAAAAACAACCTGGTGTGGGCAGCAC TACGATACGTGGCGTCCACGATGGTCACCCTTTCCAAGGAATGGCCGGGG ATGGAATGGAGTGGCTGGCCGGACTGTCCGGAGCATCCGCGGACCCGCTT ATACCTGATTCCGCCAGGGGAGGTAGGACGAGCCTAAAGCTGGCAGCATG TTTTGTAGATGTCGACTCGAGCAGGCGTTTTCAAAGATTTTACGCCAATT ATATTGTAACTCATACTACTATGCGTGCATTGTCCACATTTCCGCCAAGA TTATCTTCAATGGGTAAATAACGTTTTCCCTTAAATCTCACACAGGCAAG AATCGGTGGCCCACTACTAGACCAATCAAGCCGTGATCAGTACATGGTGC TTTGTGACTGCCTGGAGGAGGAGGATGCGGTGCTTTGGCTGTTTCGGAAA CGTCTCGGCAATGTGGTCGACACGACAGGTGTGAACGTGGATATCGGTTT TTTTTTGTACTTATGTTGTGAAACATTTTAGAGCTAGTTCCCTTACTGTA CCTAGTATAATAGTATGAAGTTTTTTCGTGCGCACGTGGCGGAGATCATT CCTTGCCTCTCGGTGTCCTCCACAGGTGGTCACTTCAATGCGACCGAGGA CTCCGACGAAGGAACCGTCGAGAACGAAAATGTCGATGAGGAGAAAGAAA GAAATGATCTACTGTGGATTATATCCTTGTCGATTGTAGTATTGTTGTTG TTGATGGCTTTGGTAGCGTCATATTTTGCCTTCCAATAACTGTAATGACG TCTGTTATCCCCCCAGGAGTCCAGGGAGCACTCTCAAGTTTAGTTTAGTT TAGGGGACTAACGTCGAGAACGAAACGTTGGGGATGAAGTGTTTTGTGCG AGTTCCTTGCCTCTCGGTATCCTCCAAAGGTGGTCGCTTCGATACGACCG AGGACCTTGAAGCAACCGTGGAGAACGAAAATACTGGTGAGGAGGGAATC GAGCACGAGAACGATCGGGAGGAATCCAAGGAGGAAACCGTGGAGAACGA AACTGTTGATGCGGTGGTCAACACGAGAGGTGGGAAAATGATGTAGAAAA CCCATGGTGGAGAAAGTTATTGGCGAGAATAACGAGGAGGAGCAATTCGA GTTGAACAGCCGGCGTCATCGCTCGTGGAGCTGCCCGTGAACCTTTTTTG TCCAGCTATAGTCGCAGGCTTTGCGGAAAGAAATGAGATTTGCTGTGAAT GACATCCCTGTCGTGTTGTTGTAGCGTCATATCTTGCCTAACGGTTACAT GTTTGTGAGGAGCGACGTTTGCGATGGAATGGAAGAACAGGCAGCCTCGC AATATAATGTTCAATGTTCCAAGGGACGGCCAGATGGGCGCGAGGCAGAT AAAGCGTGACAACACGATTAGGGCGATAATGTACGTTTTAAAGGACTTCG ACGAGTTGGGGTGATCGGAACTCACGTTCGTACCCTTTCCATGATTTTTC TTACAAGGCGACTATGCTGGTCAGGAGGGAGTCGAGCACGAGAGCGATCG GGAGGAATCCGAGGAGAAAATCATCGAGAACAACCGCTGGTACCAGGCCT GGGATCGCTTGCGCAAGAAAGCTGGTTGGGCACCACTTTCGCTCGGAGGG CTGGCCGTGATCATTTTCTGTTCAGCTACAGTCACGGGCATCGCGGAAGG AAATTATCTAGTGTGGATTACCTCCCTGTCGGTGGTGGTTTTTATGTCGG TGATGGCTTTGGTAGTGTAATATTTTGCCTTCCAAGAACTAATACGACCA TGCCCTCACGAGTCCAACGAGAACTCTCAAGTTTAGTTCAGGGGACTAAC ATCGAGAACGATAACGCTGGGGAGGAGAAAGCCAGTGGCGGGAATAATGA GGATGAGTAATTCGAGCTAAACAGCAGGCGCATCGCTGGGGGAGATGGCC GTGGCCTTTTTTTGTTCTGCTTTAGTTACAGGCTTTGCGGAAGGAAATTA TATTTTGGTGCGGATGATATTTTTTCACGGATTTGGCGGCGTCATATTTT GCCTAAAGGTTACTTTATTGTGAGGAGCGACTGTTGTGATGGAATGGAAG TACAGGCAGCCTCGGCGTATAATGTTTTTCTAAGCGTTCGTCGCGTCATG CTTACCTGATTCGACTGTTGCAATATAATGCTCCAAGGGACGGCGAAATG GGTGCGATGGAGATAAAGCGCGACAAAGACGATTATGGCGATGTTGTACG TTATAAAGGGCTTGAACGAGTTCGGGTGATCTTAACTCACGTTCCCTGAT TGTGGACCCTGTTTGGTGATCGTGTGCGTTGCCTTGCTTCTCTGAACACC CGGCTACTCTCGTCTCAATAATTATTTGACTTGTTTCCGGCCTGTTCTTA GTGCCACGTTTCCTTTTCTGATTGTCTCGCACAGTTTCTGGGTTGGTTTT CAATGTGTTTGTTCTATTGAATGTTCTTCCCTGCTTCAAATTACCGTCCT ATGCGAGCGAACCCAAGTACTAAATAGTAGTAAATAGGTAGTAAAGGATG AATGTCTTCCGGTTAAGAGGGTGGTCCTATTTATTCAGGGTGCTTGCGCT GACTTATTCGTTTGTACGTGTGTTTGTGGTCCCTCAAGAAGACTTCAAAT ATTTTCTTCTGCTTCTTCGATCTACTAGTTACGCGATGATTTATGTCTTG AGGGACCTGGTCACCCTTTTTTTCTATATTTGGTTAGAGGAAGTATCGGA TGTTTTATCGACTACATGGTAGGTCGATGCGGGCCTGTTGAGCAAGGTCA TCAATTGTTGATAACACTCAATTGGATGCCGCCCGTCGTGGGTAGGGCCA GTTGATTCTATGTTGTACCCGGTAAGTAGCGTAAGAGTACGGGGCAGGAC GAGATTCGTTATTACAGCAGTGAAGGCATCAGGAGCAGACAGGTTACATG ATGTATTCACGTAATGTCGTAAGGAGGTTGATGAGTCATAACTTGCCGTT TGTCGGACTGTCCACTTGTTGAGCCAACAGGCGTAGCCAGCAAAAAAAAA TAGGGCATAAAAGAATTTCAGGAAAGTGCGCATCACGGGCGGTTGTTGCG ACTTCTTCAATTATCATAAGTTCATAGTGGCGTTTGACGTCATAATTATA CAAGACGGTATATTCAACTGAAGGTCAATTACTTTTAGTCAAGTTGTTTG ACACCACGTTCGTTCGTGGGCAGGTGGATGAAACCGAGGAGTTCCAGAAA AACACAGCTGCTAGCGCGTCCCAATCACATCCATCGAGCCGAACGAATTC TGTTTCGCCAAGATGAGTTGGTATCAGATGGTGTATCGAAACCATAACAA AGTAGCTCGGAGTTCTATGTAAAAAGCCGACGGGGCTATTCTGCATGTAT GTGATGATATTATGATGCCAGGTTGCCACCCAACTACTGCAACATGACCC TTCCCGCTTGTGACATCTATAGGGACAACCCATGTTTTTTTATTAAAGTT TACGCATATAT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig8392:365..6625+

>mRNA_A-nodosum_M_contig8392.2.1 ID=mRNA_A-nodosum_M_contig8392.2.1|Name=mRNA_A-nodosum_M_contig8392.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1857bp|location=Sequence derived from alignment at A-nodosum_M_contig8392:365..6625+ (Ascophyllum nodosum dioecious)
ATGAAGAGCATCGAGGCGGGATACAGCTCTCCGACTCAAGGTACCCCGGA
CGAAGCAAGCACGGTCGGCATTGATCTGCACTGCCACCAGTCCGAGGGAA
CTACAGTCGAGTTCTACGACTGCGGAGGCCAAGTGGACTACGCTGGAATG
CACCAAGTATTTCTGACTCGACGAGCTCTGTATCTGTTAGTGTGGGACGT
GACACTATTCCACGACCTCGACCCAAATAATATAGCCAAGGTCACCCACG
AGAACATAATGAGATGGCTGTACACCCTCCATCTTCGTTCACCAGGGGCC
ACGGTGATACTAGTGGCCAACAAGTGTGACTCGTCCTTGACTGAGTTCGA
AGAGATTACGAAAAGGGTTGAACAGCTTGTGAAGTGCGAGTTAGACGAGT
GGCAGGAACGTCGACGCTCGAACCGCCGCTCCGCCAAAGATGTGACGACG
GTAAGGCTACTAGGCAGTGTAAATCGAATCAGCTGCAAGAGTTACGGTGG
AATCGAGGAGCTTAAAAAGCGTATCTTCGAACAAGAGGTCGCGTCAATCC
AGGTTCCACCCGCGTGGGATCTCGCTCTAAAGGTTATTGAAGCACAGCGG
ACCGGTGGCGACCCTTTACACGTTGCCCGGGACCATCTGAAGTTGAACGA
GACGGGGACAACATGCGAAACAAGAATTAAACTTGTGGCAAACACGTTCA
CAACAAAGGACCAGTTGTTCAAGTTGTGGTATGACATCGTTGGTAAAGTT
TCTGGAGAGTTAGAGGGTACGAAGAAGGCAGCGGTTTCCAACAAGGACAG
TGCTCTCGATGGTGCACTATGGATCAGTGAATTCGCAGGGCAGATCCTCC
GCATCGATGGCGATCAAGGCATCTTCCTAGACGTGAGCTGGCTCTCCAGT
ATTTTGAGTCCCATCTTGGACCACAAGCTCGCTACGAGACATTTCTCGAC
TACCGCGCTCAAAGGTTACAGAGATAGCCTCATTGAGCGCGGTGTTCTCC
GTTGGGACTTTGCCCTAAAGCTCTGGGAACAGGCCCTGACATCAGCCGGA
CGGGAGAAGAGGAGGGTCATGGTGGGTGCTGTATTCCAGGTTCTCATTAA
GCTTGGCGTGATCATTCCTCTAGGAGGGCCGGTCTTCTCAGCAGATGGCA
GGGTATCCTACTCGCCATCTAATGACTCGAAAGATACTGAGATGTTGGTG
ATCATGCGTCTACCCGAGGAATGTACTGGTTCAAAAAAAAATGATTTCGA
TCAAGATTTAAAGAAGGCTCTCAAGGACGATCAGGACGTAACACTGAAAT
GGGAGTTGGACTCGGCGGGGGCTCCGTATGGATTGGTGGAGCGACTGATA
GCTTCGTGCCATGTCATTGGCGAAGTAGAGCAGGGGGCGTGTTGGAGGTA
CGGGGCGTTGTTTAAGAGTCATGAGCGGACGGAGAGGGGTGCAAAGAAGA
TTCGATTGTTCAAGTTCGCCATCTGCTACAGCGTTAGTGAGCGGATTTTG
ACGCTGAGGATGATTGGTGACCTCAAAAACAACCTGGTGTGGGCAGCACT
ACGATACGTGGCGTCCACGATGGTCACCCTTTCCAAGGAATGGCCGGGGA
TGGAATGGAGTGGCTGGCCGGACTGTCCGGAGCATCCGCGGACCCGCTTA
TACCTGATTCCGCCAGGGGAGGCAAGAATCGGTGGCCCACTACTAGACCA
ATCAAGCCGTGATCAGTACATGGTGCTTTGTGACTGCCTGGAGGAGGAGG
ATGCGGTGCTTTGGCTGTTTCGGAAACGTCTCGGCAATGTGGTCGACACG
ACAGGTGTGAACGTGGATATCGGTTTTTTTTTGTACTTATGTTGTGAAAC
ATTTTAG
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