mRNA_A-nodosum_M_contig838.9.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig838.9.1
Unique NamemRNA_A-nodosum_M_contig838.9.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 3.070e-123
Identity = 208/403 (51.61%), Postives = 271/403 (67.25%), Query Frame = 1
Query:   13 LKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVIQDVETRWWSTQSMVERVVYLRRAVELHESLDNVAPLLGPVDWNVLELFEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLDSERKALQQPNP-GASADVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA------ESTQASVRTTALSAAGSTPAGPG 1194
            L  KA  P RR L+ +M E+  +L+  VA ML  +YV++TTDGWTSR+NESY+S TV Y++  W++  L+L+C+K  GST GEDLA  I +MI+ HGLTG V  C TDCEPSMVKAGR+L    + L H+GC+ HR+E  T+ VF+G  +  ++A ARAVV RY +SSQ +GRL    GI+ + PL V+QDVETRWWS+ +M+ER++YL +A++LHES DN+AP+L   DW VL L EP+L PFM  QK LE +  VTGS+ VP I +LR GL++    L+  +  G SA    A   +LP  EAL +DF NR+GDGS IL +REG RRQPQGF+  QV ATA+DPR K LYG+   EH  VW+AVA  A DIA      ++T  S    A    G+ P  PG
Sbjct:   41 LNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPG 442          
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 7.690e-123
Identity = 198/380 (52.11%), Postives = 262/380 (68.95%), Query Frame = 1
Query:    1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRIL-TDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVIQDVETRWWSTQSMVERVVYLRRAVELHESLDNVAPLLGPVDWNVLELFEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLDS---ERKALQQPNPGASADVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 1125
            MV  L  +A +P RR L++RM  +   L+  VA ML  ++V++TTDGWTSR NESY+S TV Y++ +WK+  L+L C+K  G+T GEDLA  +  M++ H LTG V+ C TDCEPSM+KAGR+L  D + + H+GC+ HR+E  T+ VF+G  +  ++ LAR +V RY KSSQ A RL +LCGI+ + PL V+QDVETRWWST +MV R++YL +A++LHES+D V PLL   DW VL L EP+L PFM  QK LE +  VTGS+ +  + +LR GL++   + KA+ Q   G       A   + P  EAL  DF NR+GDGS+IL +REG RRQPQGF++ QV ATALDPR K LYG+   EH GVW+AVA AA DIA
Sbjct:    1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQ--GLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIA 377          
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 2.440e-100
Identity = 167/341 (48.97%), Postives = 228/341 (66.86%), Query Frame = 1
Query:  106 LTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVIQDVETRWWSTQSMVERVVYLRRAVELHESLDNVAPLLGPVDWNVLELFEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLDSERKALQQPNPGASADVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIA 1125
            +TG++V++T+DGWT  +N++Y+SFT  Y++ ++ +V L L C K    T GEDL  +++ MI  +GLTG  V   TDCE SMVKAGR+L ++  + H+GC CHR+E +T+  F GPGV K++ALAR VVTRYT SSQA+ RL+++C IV +    V+QDVETRWWST   + R++ LRR +  HE +D+  PLL   DW VL+L E +L PFM  QK LE S  VT  LV P I DL+ GLD   + LQ  +  A + V  A+  ++ C +AL  D + R+GD +D+L + EGPRRQP+GF+K QV+ATAL PR K LYG+   EH  VW A A  A  +A
Sbjct:    1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVA 341          
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 5.330e-96
Identity = 176/403 (43.67%), Postives = 238/403 (59.06%), Query Frame = 1
Query:  148 SRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVIQDVETRWWSTQSMVERVVYLRRAVELHESLDNVAPLLGPVDWNVLELFEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLDSERKALQQPNPGASADVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAESTQASVRTTALSAAGST-PAGPGPGASARPASKRFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGGGHKVS 1350
            S +N++Y++FT  Y++ ++ +V L L   K  G T GEDL  +++ MI  +GLTG  V   TDCEP MVKAGR+L ++  + H+GC CHR E +T+  F GPGV K++AL R VVTRYT SSQA+ RL+++C IV +   +V+QDVETRWWST                   +D++ PLL   DW VL+L EP+L PFM  QK LE S  VT SLV   I DLR  LD   + LQ  +  A + V  A+  +L C  AL  D + R+ DG+D+L + EGPRRQP+GF+K QV+ATALDPR K LYG+   EH  VW+AVA  A  +A   +A+  T +  A+ S  P  P   A+ +P  +R   GF  AS A  AS+     A  L    +   + G   +S
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSPIPVEPAAAAAYQPRRRR---GFATASAAHGASSKVPMRALRLQGSRWRASSAGNWTLS 386          
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 3.870e-95
Identity = 168/395 (42.53%), Postives = 245/395 (62.03%), Query Frame = 1
Query:    1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVIQDVETRWWSTQSMVERVVYLRRAVELHESLDNVAPLLGPVDWNVLELFEPVLAPFMYVQKKLE-SNNVTGSLVVPLICDLRTGLDSERKALQQPNPGASADVLAARVLLLPCVEALAKD--FNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAESTQASVRTTALSAAGS 1176
            MVR LK +A++P +R+ + ++  +   L   V   LTG++V++T+DGWTS +N++Y+ FT  Y++ ++ +V L + C K  G T GEDL  +++ MI  +GLT   V   TDCEPSMVKAGR+L ++  + H+GC CHR+E +T+  F GPGV K++ALAR VVTRY  SSQA+ RL+++  IV +   +V+QDVETRWWST + + R++ LRR +  HE +D++ PLL   DW VL++ EP+  PF+  QK  E S +VT SLV+P I DLR  LD   + LQ     A + V  A+           KD  F  +    + ++        +P+GF+K QV+ATALDPR K LYG+   EH  VW+AVA  A  +A   +A+  T +  A+ S
Sbjct:   10 MVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAK-----------KDVFFAPKHVRPTSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSS 386          
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 8.260e-70
Identity = 146/381 (38.32%), Postives = 206/381 (54.07%), Query Frame = 1
Query:    1 MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDA-VLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGI-VGIIPLRVIQDVETRWWSTQSMVERVVYLRRAVELHESLDNVAPLLGPVDWNVLELFEPVLAPFMYVQKKLESNNVTGSLVVPLICDLRTGLDSERKALQQPNPGASADVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAESTQ 1137
            MV  ++  A +P+++  +  M  +   +   V+ ++ G+ V +T+DGWTS AN++Y+S T   +   WK+VTL++ CSK +G+T G+ LA  I+  +  HGLTG V    TDCEPSMVK GR+L  DA V   +GC  +R+E  +++VF+GP VKK M LAR +VTRY  SSQAA RL++     +G+   RVIQDV                                                               VTGSLVVP I DLR  L+     L +  P + A+V  A   ++PC++AL  D+ +R+GDG +IL ++EGPRRQP GF+ V V+ATALDPR K+ YGV  +E   VW+ V   A  IA  T+
Sbjct:    1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV---------------------------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETR 318          
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: A0A224XKI7_9HEMI (Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XKI7_9HEMI)

HSP 1 Score: 119 bits (298), Expect = 8.450e-25
Identity = 93/339 (27.43%), Postives = 159/339 (46.90%), Query Frame = 1
Query:   40 RRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVIQDVETRWWSTQSMVERVVYLRRAVELHESL-DNVAPLLGPVDWNVLELFEPVLAPFMYVQKKLESNNV-TGSLVVPLICDLRTGLDSERKALQQPNPGASADVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCK 1050
            + +L A  EE L D +  +   LTG+   +TTD WTS   E+YI  T  ++++++K+ +L L CSK   S K ED+A +++ + +  G+   +++  +D   +M KA + L +     H GC  H I  +         ++  +   + +V  + +S  A  +L          PL++IQ+V+TRW ST  M+ER V L  A++   ++ D   P L   +W +L+    +L P+  V K +  +   T ++V+PL   LR   + +R+ L     G + +VL          + L + F  R G+     T                 +AT LDPR K
Sbjct:  159 KTLLPALYEECLNDTKKKI---LTGKSFCITTDSWTSNNTENYIGVTAHFLDENFKLHSLLLECSKTDASHKAEDIAGTLKRITQYWGIDQKIILAVSDNASNMQKAIQQLLE---WKHFGCFAHTINLIVKDALKCKDIQAIVEKVKRIVEYFRRSCTATEKLSRYQATSRNTPLKLIQEVQTRWNSTYYMLERFVSLEEAIKSTMAIIDKDLPKLNFEEWKILKEMCQILKPYENVTKAISGDKYCTAAIVIPLCNGLR---NVQRRLLAYQFSGTAMNVL----------KVLNEGFEKRLGNVEHSNTLS---------------LATFLDPRFK 463          
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.880e-24
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query: 1334 EVTRYRATSGLAMEEAQESGKILYPDPLDWWRINAVKFSLLAALARRLLTIPASQAQSERVFSSAGQIVTQTRNRLSSENVELLVALKNIWSVVEEWQQS 1633
            E+T ++ ++G+ M E  + G  +Y DPLDWWR+    F  LA LARR+L IPA+QA+SER+FS AG IVT+ RN L+   VELLV L++ W +VEEW+QS
Sbjct:  197 ELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296          
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: UPI002015416C (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Alosa alosa TaxID=278164 RepID=UPI002015416C)

HSP 1 Score: 108 bits (269), Expect = 2.790e-21
Identity = 96/385 (24.94%), Postives = 169/385 (43.90%), Query Frame = 1
Query:    4 VRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNHGLTGH-VVVCNTDCEPSMVKAGRILTDDAVLMHVG-----CTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVIQDVETRWWSTQSMVERVVYLRRAVELHESLDNVAPL-LGPVDWNVLELFEPVLAPFMYVQKKLESNNV-TGSLVVPLICDLRTGLDSERKALQQPNPGASADVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCKMLYGVLPNEHEGVWQAVAMAAADIAEST 1134
            V  L+ +  IP  R + +++ +L    +G +  ML G+ +S+TTDGW+S A ESY++ T  ++++DW+M  + L  SK Q +   E+++  I+++++++ +    V+V  TD   + V        +AV  H+G     C  H I            V  +++  +A    +  S   +  L+    ++G+ P+++I D  TRW ST  M+ R    +  V        +  L L  V+W ++E  + VL P     + L + N  T S V+PL   L T L        +P+    A V          ++ ++ D   R+G   D L                   A+ LDPR   L  +     + V   V    A+++E T
Sbjct:  134 VHELEPRFKIPCYRTMNSKITKLYDTTKGGIREMLHGEKLSLTTDGWSSLATESYVTVTAHFIDEDWEMRNVVLDTSKLQTAHTAENVSTCIDSILRDYHIEQESVLVITTDNAMNYV--------NAVEQHLGITDIPCMAHTINLAARKGLAQRSVATAVSRLKAAAQHFKHSPTDSYLLEAKQKLLGLKPVQLINDCPTRWNSTYEMICRAADQQAPVAAVIMEKKITRLELSSVEWTLMEKVKDVLKPLKVATQALSTENYPTASAVLPLQYVLLTQL--------KPSTDDPAGVKE--------MKTMSTDLKARYGPDKDALLLLN--------------TASYLDPRFHRLVHLEQESRQAVRDKVQRELAEVSEET 480          
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Match: UPI001C8ABA7E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Drosophila ficusphila TaxID=30025 RepID=UPI001C8ABA7E)

HSP 1 Score: 108 bits (269), Expect = 4.350e-21
Identity = 95/330 (28.79%), Postives = 152/330 (46.06%), Query Frame = 1
Query:  115 QYVSMTTDGWTSRANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAIS--IETMIKNHGLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDGPGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVIQDVETRWWSTQSMVERVVYLRRAVELHESLDNVAPLLGPV---DWNVLELFEPVLAPFMYVQKKLESNNV-TGSLVVPLICDLRTGLDSERKALQQPNPGASADVLAARVLLLPCVEALAKDFNNRFGDGSDILTFREG----PRRQPQGFRKVQVMATALDPRCKMLYGVLPN 1074
            QYV++TTDGWTSRANE+YI+ T  +V+  +++V+  LS +     T    L I+  I  ++    L   VV   TD + +M KA   L     + H  C  H I  +   +     +K  +   + VV    +SS A  + +E   +    PL +IQ+V TRW S   M+ER++    A+ +  SL   A    P    + +VLE    +L PF    K +      T SLV+P++C+++  + S +++ + P    + + L+ R             FN+RFG+       R      PR + QGF++        D  C+ L   L N
Sbjct:   62 QYVAITTDGWTSRANEAYITVTCHFVDKKFQLVSAVLSTASLLTPTNHSALNIADTIRQVLNEWKLLHKVVTIVTDNDATMKKACEHLQ----MKHFPCFAHTINLLVQEILKLEIIKPILTKCKTVVAFMKRSSTAMTKFKEAQMVTD--PLGLIQEVPTRWNSAFQMMERILKTNGALSI--SLLGTAKAPAPFSAKEISVLEELCSLLRPFEKATKLISGGKYPTMSLVIPIVCEMQIQVFSYKQSFKSPEANLAFNFLSDR-------------FNDRFGNYETRTVPRMATLIDPRFKKQGFQRTN----NTDQACRALEDELHN 366          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig838.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUY5_9PHAE3.070e-12351.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI7.690e-12352.11Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JHP9_9PHAE2.440e-10048.97Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE5.330e-9643.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE3.870e-9542.53Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L7Y8_9PHAE8.260e-7038.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A224XKI7_9HEMI8.450e-2527.43Putative hat-25 zm (Fragment) n=1 Tax=Panstrongylu... [more]
A0A6H5JWI1_9PHAE1.880e-2453.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
UPI002015416C2.790e-2124.94E3 SUMO-protein ligase ZBED1-like n=1 Tax=Alosa al... [more]
UPI001C8ABA7E4.350e-2128.79E3 SUMO-protein ligase ZBED1-like n=1 Tax=Drosophi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig838contigA-nodosum_M_contig838:249311..250943 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LCS5
PFAMsDUF659,Dimer_Tnp_hAT,zf-BED
Model size1633
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.01e-125
EggNOG OGsKOG1121@1|root,KOG1121@2759|Eukaryota
Descriptionprotein dimerization activity
Cds size1359
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870190.6445765-CDS-A-nodosum_M_contig838:249310..2506691680870190.6445765-CDS-A-nodosum_M_contig838:249310..250669Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig838 249311..250669 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870190.6561737-UTR-A-nodosum_M_contig838:250669..2509431680870190.6561737-UTR-A-nodosum_M_contig838:250669..250943Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig838 250670..250943 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig838.9.1prot_A-nodosum_M_contig838.9.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig838 249311..250669 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig838.9.1

>prot_A-nodosum_M_contig838.9.1 ID=prot_A-nodosum_M_contig838.9.1|Name=mRNA_A-nodosum_M_contig838.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=453bp
MVRTLKGKASIPQRRVLIARMEELLVDLQGSVATMLTGQYVSMTTDGWTS
RANESYISFTVVYVNDDWKMVTLALSCSKKQGSTKGEDLAISIETMIKNH
GLTGHVVVCNTDCEPSMVKAGRILTDDAVLMHVGCTCHRIECVTALVFDG
PGVKKSMALARAVVTRYTKSSQAAGRLQELCGIVGIIPLRVIQDVETRWW
STQSMVERVVYLRRAVELHESLDNVAPLLGPVDWNVLELFEPVLAPFMYV
QKKLESNNVTGSLVVPLICDLRTGLDSERKALQQPNPGASADVLAARVLL
LPCVEALAKDFNNRFGDGSDILTFREGPRRQPQGFRKVQVMATALDPRCK
MLYGVLPNEHEGVWQAVAMAAADIAESTQASVRTTALSAAGSTPAGPGPG
ASARPASKRFCGGFMAASQAQAASASTVTAAPSLPAEHFLNEAGGGHKVS
GD*
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mRNA from alignment at A-nodosum_M_contig838:249311..250943+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig838.9.1 ID=mRNA_A-nodosum_M_contig838.9.1|Name=mRNA_A-nodosum_M_contig838.9.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1633bp|location=Sequence derived from alignment at A-nodosum_M_contig838:249311..250943+ (Ascophyllum nodosum dioecious)
ATGGTGCGCACGCTTAAAGGCAAGGCCAGCATACCACAGCGACGTGTTCT AATCGCCCGGATGGAGGAACTTCTAGTGGACCTGCAAGGGTCGGTCGCCA CCATGCTGACGGGCCAGTACGTCTCCATGACCACGGACGGATGGACGTCA CGCGCCAACGAGTCCTACATTTCCTTCACCGTCGTGTACGTCAATGACGA TTGGAAGATGGTGACGCTCGCGCTCAGCTGTTCGAAGAAACAAGGTTCGA CGAAGGGGGAAGACCTGGCTATATCCATCGAGACCATGATCAAGAACCAC GGCCTCACCGGGCACGTGGTCGTGTGCAACACGGACTGCGAGCCGTCAAT GGTGAAGGCGGGTCGCATTCTCACCGATGATGCCGTATTGATGCACGTTG GGTGCACCTGTCACCGGATCGAGTGCGTCACGGCGCTGGTCTTCGACGGG CCCGGCGTGAAGAAGTCCATGGCTCTAGCTCGTGCCGTGGTGACTCGCTA CACAAAGTCCTCACAGGCTGCAGGGCGACTTCAGGAGTTGTGCGGTATAG TCGGCATCATCCCTTTGAGGGTAATTCAGGACGTAGAGACGCGGTGGTGG TCGACGCAGTCGATGGTCGAGCGCGTGGTGTACCTTCGACGTGCTGTTGA GCTGCATGAGTCCCTGGACAACGTCGCCCCCCTGCTAGGGCCGGTGGACT GGAACGTCCTGGAGCTGTTCGAGCCTGTTCTTGCGCCGTTCATGTATGTC CAGAAAAAGCTCGAGTCCAATAACGTGACGGGAAGCTTGGTCGTGCCGCT CATCTGTGACCTCCGTACCGGGTTGGACTCGGAGCGAAAGGCGCTGCAGC AGCCTAACCCGGGCGCATCCGCTGATGTCTTGGCGGCGCGGGTATTGCTC CTGCCCTGCGTCGAGGCACTAGCCAAGGATTTCAATAACCGCTTCGGTGA CGGGTCTGACATCTTGACGTTCCGCGAAGGTCCACGACGCCAGCCACAGG GCTTTCGGAAGGTGCAAGTTATGGCGACCGCCCTCGACCCACGGTGCAAG ATGCTGTACGGCGTTCTACCCAACGAGCACGAGGGGGTGTGGCAGGCGGT GGCCATGGCGGCCGCGGACATCGCCGAGAGCACACAGGCATCCGTCCGGA CAACGGCATTGTCAGCGGCTGGATCAACGCCAGCTGGACCTGGGCCTGGG GCATCTGCCCGTCCCGCTAGCAAACGATTTTGCGGCGGCTTCATGGCGGC TTCCCAGGCGCAGGCAGCGTCAGCTTCCACGGTCACCGCCGCGCCGTCGC TGCCGGCTGAGCACTTCCTGAATGAAGCAGGAGGAGGTCACAAGGTATCG GGCGACTAGCGGGTTGGCGATGGAAGAGGCACAGGAGAGCGGCAAGATCC TCTACCCCGACCCGCTGGATTGGTGGCGGATAAACGCCGTCAAATTCTCG CTGCTAGCGGCGCTTGCCCGGCGCCtTTTGACCATCCCGGCATCGCAGGC GCAGTCGGAGCGCGTGTTCTCGAGCGCTGGGCAGATTGTCACCCAAACGC GCAACCGCCTGTCATCGGAAAACGTCGAGCTTCTGGTGGCATTGAAGAAC ATTTGGAGTGTGGTGGAGGAATGGCAGCAGTCG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig838:249311..250943+

>mRNA_A-nodosum_M_contig838.9.1 ID=mRNA_A-nodosum_M_contig838.9.1|Name=mRNA_A-nodosum_M_contig838.9.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1359bp|location=Sequence derived from alignment at A-nodosum_M_contig838:249311..250943+ (Ascophyllum nodosum dioecious)
ATGGTGCGCACGCTTAAAGGCAAGGCCAGCATACCACAGCGACGTGTTCT
AATCGCCCGGATGGAGGAACTTCTAGTGGACCTGCAAGGGTCGGTCGCCA
CCATGCTGACGGGCCAGTACGTCTCCATGACCACGGACGGATGGACGTCA
CGCGCCAACGAGTCCTACATTTCCTTCACCGTCGTGTACGTCAATGACGA
TTGGAAGATGGTGACGCTCGCGCTCAGCTGTTCGAAGAAACAAGGTTCGA
CGAAGGGGGAAGACCTGGCTATATCCATCGAGACCATGATCAAGAACCAC
GGCCTCACCGGGCACGTGGTCGTGTGCAACACGGACTGCGAGCCGTCAAT
GGTGAAGGCGGGTCGCATTCTCACCGATGATGCCGTATTGATGCACGTTG
GGTGCACCTGTCACCGGATCGAGTGCGTCACGGCGCTGGTCTTCGACGGG
CCCGGCGTGAAGAAGTCCATGGCTCTAGCTCGTGCCGTGGTGACTCGCTA
CACAAAGTCCTCACAGGCTGCAGGGCGACTTCAGGAGTTGTGCGGTATAG
TCGGCATCATCCCTTTGAGGGTAATTCAGGACGTAGAGACGCGGTGGTGG
TCGACGCAGTCGATGGTCGAGCGCGTGGTGTACCTTCGACGTGCTGTTGA
GCTGCATGAGTCCCTGGACAACGTCGCCCCCCTGCTAGGGCCGGTGGACT
GGAACGTCCTGGAGCTGTTCGAGCCTGTTCTTGCGCCGTTCATGTATGTC
CAGAAAAAGCTCGAGTCCAATAACGTGACGGGAAGCTTGGTCGTGCCGCT
CATCTGTGACCTCCGTACCGGGTTGGACTCGGAGCGAAAGGCGCTGCAGC
AGCCTAACCCGGGCGCATCCGCTGATGTCTTGGCGGCGCGGGTATTGCTC
CTGCCCTGCGTCGAGGCACTAGCCAAGGATTTCAATAACCGCTTCGGTGA
CGGGTCTGACATCTTGACGTTCCGCGAAGGTCCACGACGCCAGCCACAGG
GCTTTCGGAAGGTGCAAGTTATGGCGACCGCCCTCGACCCACGGTGCAAG
ATGCTGTACGGCGTTCTACCCAACGAGCACGAGGGGGTGTGGCAGGCGGT
GGCCATGGCGGCCGCGGACATCGCCGAGAGCACACAGGCATCCGTCCGGA
CAACGGCATTGTCAGCGGCTGGATCAACGCCAGCTGGACCTGGGCCTGGG
GCATCTGCCCGTCCCGCTAGCAAACGATTTTGCGGCGGCTTCATGGCGGC
TTCCCAGGCGCAGGCAGCGTCAGCTTCCACGGTCACCGCCGCGCCGTCGC
TGCCGGCTGAGCACTTCCTGAATGAAGCAGGAGGAGGTCACAAGGTATCG
GGCGACTAG
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