mRNA_A-nodosum_M_contig8313.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: D7FIB5_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB5_ECTSI) HSP 1 Score: 225 bits (573), Expect = 8.390e-70 Identity = 115/165 (69.70%), Postives = 139/165 (84.24%), Query Frame = 1
Query: 13 KTDLFNKLSASLYREVVDSPTGRHLLPLVKAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIYRQVEPLEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEMTDERQR 507
K +L+NKLS LYREV+DSPTGRH+ PL+KAVC +F D++ELTQVARHCDRLFP DLA DP AAA+++R KFT L +K ERKRLAS+LEL+MRAIYYDVIDPAAVEGYIA IY+QVE LED QF+VR A ++PP+P++ITG V+ SMLALQK+MT+ RQR
Sbjct: 142 KVELYNKLSTGLYREVLDSPTGRHIHPLIKAVCLAFNDLQELTQVARHCDRLFPEDLATGGIDPTAAASTLREKFTVLGRKNERKRLASQLELKMRAIYYDVIDPAAVEGYIASIYQQVELLEDVQFLVRHAGTVMPPDPKEITGIGVKSSMLALQKDMTEARQR 306
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: A0A7S2BKK2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKK2_9STRA) HSP 1 Score: 142 bits (358), Expect = 5.120e-38 Identity = 75/167 (44.91%), Postives = 114/167 (68.26%), Query Frame = 1
Query: 22 LFNKLSASLYREVVDSPTGRHLLPL-VKAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIYRQVE-----PLEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEMTDERQ 504
+ K+S+ +YRE DS G+HL+ L V AVCR F D+ +L V R+CDRLFPP+L+ DP+ +A ++ +F LR++ E+K+L++ELE+++RAIYYDVI P VEG IA IY+ + LED QF++R AS + P +P+ ITG + ++ +LQ ++T ER+
Sbjct: 108 MVKKVSSGVYREKSDSEAGKHLIGLLVSAVCRQFEDLDDLRNVVRNCDRLFPPELSKVERDPERSAKKIQDRFLQLRRENEKKQLSAELEIKLRAIYYDVIAPEKVEGIIASIYQAQKGERPLKLEDIQFMIRNASLLFPTDPKSITGILIRNNVWSLQDKLTSERE 274
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: A0A7S2RGP1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGP1_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.410e-32 Identity = 75/170 (44.12%), Postives = 110/170 (64.71%), Query Frame = 1
Query: 13 KTDLFNKLSASLYREVVDSPTGRHLLP-LVKAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIYR---QVEP---LEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEMTDER 501
K +L +K+S +YRE DSP G+ L+P LV+AV F D+ EL V R+CDRLFP +L+ + + AA ++ KF LR++ RK+L++ELEL++RAIYYDVI+P VEG I +Y VE LED QF+++ A ++ P P DITG V +++ LQ ++ +R
Sbjct: 171 KQNLQDKISGGIYREEADSPEGQELIPALVEAVSIEFSDLDELRNVVRNCDRLFPAELSAARN-ARRAARRLKEKFVTLRRENARKKLSTELELKLRAIYYDVIEPTEVEGVIRAVYEGDWTVEKPLELEDLQFLIKNAPRLFPEKPGDITGPGVRKAVWDLQDQLIRDR 339
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: A0A8J2SN79_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN79_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.280e-31 Identity = 78/179 (43.58%), Postives = 108/179 (60.34%), Query Frame = 1
Query: 22 LFNKLSASLYREVVDSPTGRHLLP-LVKAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIY---RQVEP-------------LEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEMTDERQR 507
LF K A +Y E+ D P R + LV A+ +F E+ V RHCDRL P D +SD P+ AA +R KF ALR+ E+K+L +ELEL+MRA+YYDVIDP VE YI IY R++E LED QF+++ A ++LP P++ITG V ++ LQ+E+ DER++
Sbjct: 186 LFEKACAGVYLEIADDPAHRDRISMLVDAIADAFPLPAEMKNVVRHCDRLMPKD--PSSDFPKNHAARIRAKFVALRRDNEKKKLQAELELKMRALYYDVIDPTHVEKYIKAIYQDPRKLEERPEDASGDELPLELEDIQFLIKNAPRLLPKTPKEITGHGVRAAVWRLQQELRDEREK 362
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: T0SH23_SAPDV (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0SH23_SAPDV) HSP 1 Score: 114 bits (284), Expect = 7.320e-27 Identity = 64/169 (37.87%), Postives = 101/169 (59.76%), Query Frame = 1
Query: 1 RLRKKTDLFNKLSASLYREVVDSPTGRHLLP-LVKAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIYRQVEPLEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEMTDERQ 504
R ++K LF KL YRE D+ G + L+K + F ++ + R+ +RLFPP+L SD P A A ++R F L++ ++K+LA+ELEL++R IY+D IDP AVE + IY +++ L+D +F++R A+ + PP ++ G + + ALQ EM ERQ
Sbjct: 153 RRQQKQILFEKLKDGPYRESADTNDGMERIHRLMKRAIKEFPTEDDVQSLIRNLERLFPPNLITASDHPSATATAMRAHFVQLKQDNQKKKLAAELELKIRNIYFDRIDPVAVEPMVLSIYTEIKSLKDIKFLIRYATSLFPPTAAEVDGAELRDRLAALQDEMARERQ 321
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: T0SAD5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SAD5_SAPDV) HSP 1 Score: 110 bits (274), Expect = 5.620e-26 Identity = 61/164 (37.20%), Postives = 98/164 (59.76%), Query Frame = 1
Query: 1 RLRKKTDLFNKLSASLYREVVDSPTGRHLLP-LVKAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIYRQVEPLEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEM 489
R ++K LF KL YRE D+ G + L+K + F ++ + R+ +RLFPP+L SD P A A ++R F L++ ++K+LA+ELEL++R IY+D IDP AVE + IY +++ L+D +F++R A+ + PP ++ G + + ALQ EM
Sbjct: 153 RRQQKQILFEKLKDGPYRESADTNDGMERIHRLMKRAIKEFPTEDDVQSLIRNLERLFPPNLITASDHPSATATAMRAHFVQLKQDNQKKKLAAELELKIRNIYFDRIDPVAVEPMVLSIYTEIKSLKDIKFLIRYATSLFPPTAAEVDGAELRDRLAALQDEM 316
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: W4FNV6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FNV6_9STRA) HSP 1 Score: 110 bits (276), Expect = 8.740e-26 Identity = 62/168 (36.90%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 1 RLRKKTDLFNKLSASLYREVVDSPTGRHLLPLV-KAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIYRQVEPLEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEMTDER 501
R R+K +L++KL Y E DS G+ ++ V K V + F +++ + R+ +RLFPP L D A SVR FT L++ E+K+LA+ELEL++R IY+D IDP++VE ++ IY +++ L D +F++R A+ + PP + + G + + ++ LQ++M ER
Sbjct: 149 RRRQKQELYDKLKDGPYLESADSNEGQAMIQSVMKRVLKEFQTEEDVKSLIRNVERLFPPSLTKAQDP--TTATSVRAAFTELKRDNEKKKLAAELELKIRNIYFDRIDPSSVEPMVSSIYLEIKALNDIKFLIRHATALFPPTADLVNGSDLRKKLVGLQEDMARER 314
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: A0A397A1Y8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A1Y8_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.360e-25 Identity = 62/168 (36.90%), Postives = 103/168 (61.31%), Query Frame = 1
Query: 1 RLRKKTDLFNKLSASLYREVVDSPTGRHLLPLV-KAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIYRQVEPLEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEMTDER 501
R R+K +L++KL Y E DS G+ ++ V K V + F +++ + R+ +RLFPP L D A SVR FT L++ E+K+LA+ELEL++R IY+D IDP++VE ++ IY +++ L D +F++R A+ + PP + + G + + ++ LQ +M ER
Sbjct: 146 RRRQKQELYDKLKDGPYLESADSNEGQAMIQSVMKRVLKEFQTEEDVKSLIRNVERLFPPSLTKAQDP--TTATSVRTAFTELKRDNEKKKLAAELELKIRNIYFDRIDPSSVEPMVSSIYLEIKALNDIKFLIRHATALFPPTADLVNGSDLRKKLVGLQDDMARER 311
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: A0A397DNI5_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DNI5_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.840e-25 Identity = 62/168 (36.90%), Postives = 104/168 (61.90%), Query Frame = 1
Query: 1 RLRKKTDLFNKLSASLYREVVDSPTGRHLLPLV-KAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIYRQVEPLEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEMTDER 501
R R+K +L++KL Y E DS G+ ++ V K V + F +++ + R+ +RLFPP L D A SVR FT L++ E+K+LA+ELEL++R IY+D IDP++VE ++ IY +++ L D +F++R A+ + PP + + G + + ++ LQ++M ER
Sbjct: 146 RRRQKQELYDKLKDGPYLESADSNEGQAMIQSVMKRVLKEFQTEEDVKSLIRNVERLFPPSLTKAQDP--TTATSVRAAFTELKRDNEKKKLAAELELKIRNIYFDRIDPSSVEPMVSSIYLEIKALNDIKFLIRHATALFPPTADLVNGSDLRKKLVGLQEDMARER 311
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Match: A0A7S1C6P5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6P5_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.550e-25 Identity = 64/164 (39.02%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 13 KTDLFNKLSASLYREVVDSPTGRHLLP-LVKAVCRSFVDIKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELRMRAIYYDVIDPAAVEGYIAFIYRQVEPLEDTQFIVRRASKILPPNPEDITGERVERSMLALQKEMTDER 501
K L +L +YRE DS GR + +V+AV F D EL + R+ +RLFP A AA++RR F L+++ E K+LA+E+EL++RAIY+++I P VEG + IYR + LED +F++ A+K+ PP PE++T E + ++ AL++++ +ER
Sbjct: 220 KQRLTKRLVHEVYREAGDSDEGRAAIDAVVRAVFIEFTDFGELRSLIRNAERLFP------EHPSDADAAAIRRTFRQLKRENEMKKLAAEVELKLRAIYFNMIKPETVEGVVHAIYRVITRLEDIKFLLHYATKLFPPTPEELTAEGLFDNLQALRRKLKEER 377 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8313.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8313.2.1 >prot_A-nodosum_M_contig8313.2.1 ID=prot_A-nodosum_M_contig8313.2.1|Name=mRNA_A-nodosum_M_contig8313.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=170bp RLRKKTDLFNKLSASLYREVVDSPTGRHLLPLVKAVCRSFVDIKELTQVAback to top mRNA from alignment at A-nodosum_M_contig8313:10477..11700+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8313.2.1 ID=mRNA_A-nodosum_M_contig8313.2.1|Name=mRNA_A-nodosum_M_contig8313.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1224bp|location=Sequence derived from alignment at A-nodosum_M_contig8313:10477..11700+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8313:10477..11700+ >mRNA_A-nodosum_M_contig8313.2.1 ID=mRNA_A-nodosum_M_contig8313.2.1|Name=mRNA_A-nodosum_M_contig8313.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=510bp|location=Sequence derived from alignment at A-nodosum_M_contig8313:10477..11700+ (Ascophyllum nodosum dioecious)back to top |