mRNA_A-nodosum_M_contig83.60.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig83.60.1
Unique NamemRNA_A-nodosum_M_contig83.60.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.450e-83
Identity = 137/228 (60.09%), Postives = 164/228 (71.93%), Query Frame = 1
Query:    4 LDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLALIRKVPLGLKRGLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVSTVLYSCIEEKSDPIFKDGEDLQAGDHVRLYTRTGNACVGVGVVKEYEGQVWGRTGIHLVPAMTTRARVRRWIVRVDEVLMPGA 687
            LDIEW+I+ +GA  NPPAT QLAAGK V++  +LHGQ++ P ELP  LV LLED  LT TGVGI  DCTR+  F+GV+VAHAVDL  LA+ RKV LGL+RGLADLC HLLG+ L KD  VR S+WN+ DLS+ QK YAALDAY   +L+  I E SD IF+D E+L  GD VRLYTR GN CVG G + E+  + WG TG +LVP   TR   RRW VR+D V +P A
Sbjct:  256 LDIEWEISAAGAPANPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQKRYAALDAYACLLLHGRIGELSDSIFRDAEELHVGDRVRLYTRAGNDCVGEGCIVEHTDETWGTTGFYLVPRRATRRFARRWAVRLDRVHVPRA 483          
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 5.300e-30
Identity = 89/239 (37.24%), Postives = 129/239 (53.97%), Query Frame = 1
Query:    1 GLDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHG--QKTPPTELPGSLVGLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLALIRKVPLGLKRGLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVSTVLYSCIEEKSDPIF-KDGEDLQ-AGDHVRLYTRTGNACVGVGVVKEYEG-----QVWGRTGIHLVPAMTTRAR-VRRWIVRVDEVLMPGA 687
            G+D EW+    G+ E    T QLA       L  L    ++T P+    SL  LL D ++T  GV +  D +R+++ +GV+    VDL   A    V L   R LA +    LG+SLSK+  VRFSRW++ +L++ Q  YA LDAY + VL++ I +  DPIF     D+  AG  VRLYT    +CVGVG V++ E      + WG T + L     TR+  ++R +V+V +VL P +
Sbjct:   91 GMDCEWEPPFDGSSEGAVCTLQLALPDGTAYLFHLQRGTRRTRPSTFNRSLKVLLNDPTITKVGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDLPC-RSLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQVNYACLDAYAAVVLHAEIGKSKDPIFCMAPSDIPIAGTEVRLYTNNHESCVGVGQVQDEEAARSLVEKWG-TDLKLAQREGTRSGGLKRVVVKVVDVLKPAS 327          
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: UPI00053FA13A (Werner Syndrome-like exonuclease n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FA13A)

HSP 1 Score: 86.7 bits (213), Expect = 2.400e-17
Identity = 58/158 (36.71%), Postives = 80/158 (50.63%), Query Frame = 1
Query:    1 GLDIEWDIALSGAH--ENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLALIR--KVPLGLKRGLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVSTVLYSCIE 462
            GLDIEW       H   NP +  QL  G   LV Q+ H        +P SL   L D   TF GVGI+ D  ++   + ++V++ VDL  LA IR  +  LG   GL  L   +LG   +K   +  S W  + LSE QK YAA+DA++S  +  C++
Sbjct:   44 GLDIEWLPNFYNRHPSRNPISVLQLCVGHHCLVFQLQHA-----CYIPQSLHNFLSDDDYTFVGVGIDDDVQKLYYDYDLEVSNTVDLRTLASIRYDQPTLG-NTGLVKLAEMVLGLQYNKPRDITISNWTNRYLSETQKEYAAIDAFLSFEIGKCLD 195          
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: A0A200R224_9MAGN (3'-5' exonuclease domain n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R224_9MAGN)

HSP 1 Score: 80.9 bits (198), Expect = 4.640e-15
Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = 1
Query:    1 GLDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLALIRKVPLGLKR----GLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVSTVLYSCIEE 465
            GLDIEW+ + S  + +  AT QL  G   +++Q+LH        +P +L  LL D S++F GVGI  D +++E  +G++    ++L +LA   KV LG ++    GL +L   ++G S+ K      S W  K+L+ +Q  YA +DAY S V+ S + E
Sbjct:   59 GLDIEWN-SNSNDNNDKVATLQLCYGDRCIIIQLLHLDL-----IPFALSTLLIDQSISFVGVGITEDLSKLECDYGLESVPGIELGQLA--DKV-LGKQQFSGSGLVELACEIVGLSIEKPASASCSDWGLKNLTSEQIKYATIDAYASFVIGSKLLE 208          
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: A0A2T7DH33_9POAL (3'-5' exonuclease domain-containing protein n=1 Tax=Panicum hallii var. hallii TaxID=1504633 RepID=A0A2T7DH33_9POAL)

HSP 1 Score: 80.9 bits (198), Expect = 1.100e-14
Identity = 55/147 (37.41%), Postives = 71/147 (48.30%), Query Frame = 1
Query:    1 GLDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLAL-IRKVPLGLKRGLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVS 438
            GLD+EW  A   A   P A  Q+      LV QIL         +PG L   L D   TF GVGI  D  ++   +G++VA AVDL +LA      P  L+ GL  L   ++G  + K   VR S W+   LS+ Q  YA  DA+ S
Sbjct:  111 GLDVEWRPA-GRAPPGPVAVLQVCVDHRCLVFQILRADY-----VPGKLSAFLADRRFTFVGVGIRDDAAKLRAGYGLRVASAVDLRRLAADALGRPDLLRAGLQALVLEVMGVQMEKPHHVRVSAWDAAALSDDQLKYACADAFAS 251          
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: A0A1E5VPQ2_9POAL (3'-5' exonuclease domain-containing protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VPQ2_9POAL)

HSP 1 Score: 81.6 bits (200), Expect = 2.550e-14
Identity = 49/134 (36.57%), Postives = 72/134 (53.73%), Query Frame = 1
Query:   40 HENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLALIRKVPLGLK-RGLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVS 438
            H+ P A  QL  G+  LV QIL         +P +LVG L D  +TF GVG++ D  ++ + +G++VA AVDL +LA++      L   GL  L + ++G  + K   VR S W+ + LS+ Q  YA  D   S
Sbjct:  249 HKAPVAVLQLCVGRRCLVFQILRADY-----VPDALVGFLADDRITFVGVGVHNDAAKLREGYGLEVARAVDLRRLAVVELGNPALHGAGLQALVWEVMGLQMEKPHHVRVSAWDARRLSKAQLKYACADDLAS 377          
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: A0A2S3HRX3_9POAL (3'-5' exonuclease domain-containing protein n=2 Tax=Panicum TaxID=4539 RepID=A0A2S3HRX3_9POAL)

HSP 1 Score: 77.0 bits (188), Expect = 1.090e-13
Identity = 54/147 (36.73%), Postives = 69/147 (46.94%), Query Frame = 1
Query:    1 GLDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLAL-IRKVPLGLKRGLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVS 438
            GLD+EW  A   A   P A  Q+      LV QIL         +P  L   L D   TF GVGI  D  ++   +G++VA AVDL +LA      P  L+ GL  L   ++G  + K   VR S W+   LS  Q  YA  DA+ S
Sbjct:   52 GLDVEWRPA-GRAPPGPVAVLQVCVDHRCLVFQILRADY-----VPAKLSAFLADRRFTFVGVGIRDDAAKLRAGYGLRVASAVDLRRLAADALGRPDLLRAGLQALVLEVMGVQMEKPHHVRVSAWDAAALSYDQLMYACADAFAS 192          
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: A0A6A5V400_9PLEO (Uncharacterized protein n=1 Tax=Bimuria novae-zelandiae CBS 107.79 TaxID=1447943 RepID=A0A6A5V400_9PLEO)

HSP 1 Score: 78.6 bits (192), Expect = 3.610e-13
Identity = 65/170 (38.24%), Postives = 88/170 (51.76%), Query Frame = 1
Query:    1 GLDIEWDIALSGAHENPP-----ATFQLAAGKFVLVLQI-LHGQKTPPTELPGSLVGLLEDASLTFTGVGI-NADCTRIEKFFGVKVAHAVDLAKLALIRKVP------LGLKR-GLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVSTVLYSCIEEK 468
            G D+EW + +  + +NPP        Q+A+   V +  I LHG KT    +  SL  L+E  ++  TGV I NAD  R+ K+FG+K   A +L+ L  + K        L  K   LA L    LG  L K G VR S W+ K LS+KQK YAA DAY   +L+ C+  K
Sbjct:   78 GFDMEWPMYIRDS-DNPPLQKRIGLIQVASETTVALFHIGLHGGKTTAEIIAPSLRKLIESPTIAKTGVAIFNADFARLRKYFGLKPQGAFELSHLDHLVKFAHDPYYLLNTKTVALAHLVETHLGLPLGK-GPVRTSNWS-KALSQKQKDYAASDAYAGFMLFHCMNAK 244          
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: A0A4P9XK89_9FUNG (3'-5' exonuclease domain-containing protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XK89_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 1.040e-12
Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = 1
Query:   79 KFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLALIRKVPL-GLKRG-LADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVSTVLYSCIEEKSDPIFKDGED 498
            K + +L + H +       PG+L   LEDASL   GV +  D TR+ + +GVK    V+L   A  R   L G++R  LA L   LLG++L K G VR   W R +L+E+Q+ YAA DAYV   +Y  +E    P+    ED
Sbjct:  149 KTIALLHLFHMES-----FPGALRTFLEDASLHKAGVNVTGDATRLSRDYGVKPVGLVELGVNARQRVSDLAGIRRPTLAMLTEELLGKTLEK-GPVRVGNWERTNLTEEQREYAANDAYVCYKIYRRLEVLKSPLTTVEED 284          
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Match: A0A7J0H8D5_9ERIC (3'-5' exonuclease domain-containing protein n=2 Tax=Actinidia TaxID=3624 RepID=A0A7J0H8D5_9ERIC)

HSP 1 Score: 73.9 bits (180), Expect = 1.310e-12
Identity = 46/145 (31.72%), Postives = 72/145 (49.66%), Query Frame = 1
Query:    1 GLDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLVGLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLALIR-KVPLGLKRGLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAY 432
            GLD EW   +  +  N   T QL      L+LQ+          +P S+   L D ++TF GV +  D +++   +G+  ++ VD+  LA+ R  V    K GL  L + ++G  ++K   V  S W  + L EKQ  YA++DAY
Sbjct:   44 GLDCEWRTNIISSMNNKTDTLQLCVDTKCLILQMFSMDY-----IPQSIKSFLSDPNVTFVGVEVGDDTSKLRDGYGLSCSNTVDIQALAMERWPVRFYRKPGLKKLAHEVVGLLMAKPMHVCRSNWEARVLDEKQVEYASIDAY 183          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig83.60.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE1.450e-8360.093'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JRJ6_9PHAE5.300e-3037.243'-5' exonuclease domain-containing protein n=1 Ta... [more]
UPI00053FA13A2.400e-1736.71Werner Syndrome-like exonuclease n=1 Tax=Beta vulg... [more]
A0A200R224_9MAGN4.640e-1535.223'-5' exonuclease domain n=1 Tax=Macleaya cordata ... [more]
A0A2T7DH33_9POAL1.100e-1437.413'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A1E5VPQ2_9POAL2.550e-1436.573'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A2S3HRX3_9POAL1.090e-1336.733'-5' exonuclease domain-containing protein n=2 Ta... [more]
A0A6A5V400_9PLEO3.610e-1338.24Uncharacterized protein n=1 Tax=Bimuria novae-zela... [more]
A0A4P9XK89_9FUNG1.040e-1238.733'-5' exonuclease domain-containing protein (Fragm... [more]
A0A7J0H8D5_9ERIC1.310e-1231.723'-5' exonuclease domain-containing protein n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig83contigA-nodosum_M_contig83:670083..671039 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FVB3
Preferred nameWRN
PFAMsDEAD,DNA_pol_A_exo1,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind
Model size688
Max annot lvl2759|Eukaryota
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
Exons2
Evalue3.83e-26
EggNOG OGsKOG4373@1|root,KOG4373@2759|Eukaryota
EC3.1.11.1,3.6.4.12
Description3'-5' exonuclease activity
Cds size687
COG categoryC
BRITEko00000,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870174.3431094-CDS-A-nodosum_M_contig83:670083..6703601680870174.3431094-CDS-A-nodosum_M_contig83:670083..670360Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig83 670084..670360 -
1680870174.3590448-CDS-A-nodosum_M_contig83:670629..6710391680870174.3590448-CDS-A-nodosum_M_contig83:670629..671039Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig83 670630..671039 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig83.60.1prot_A-nodosum_M_contig83.60.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig83 670084..671039 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig83.60.1

>prot_A-nodosum_M_contig83.60.1 ID=prot_A-nodosum_M_contig83.60.1|Name=mRNA_A-nodosum_M_contig83.60.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=229bp
GLDIEWDIALSGAHENPPATFQLAAGKFVLVLQILHGQKTPPTELPGSLV
GLLEDASLTFTGVGINADCTRIEKFFGVKVAHAVDLAKLALIRKVPLGLK
RGLADLCYHLLGRSLSKDGRVRFSRWNRKDLSEKQKTYAALDAYVSTVLY
SCIEEKSDPIFKDGEDLQAGDHVRLYTRTGNACVGVGVVKEYEGQVWGRT
GIHLVPAMTTRARVRRWIVRVDEVLMPGA
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mRNA from alignment at A-nodosum_M_contig83:670083..671039-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig83.60.1 ID=mRNA_A-nodosum_M_contig83.60.1|Name=mRNA_A-nodosum_M_contig83.60.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=957bp|location=Sequence derived from alignment at A-nodosum_M_contig83:670083..671039- (Ascophyllum nodosum dioecious)
GGGCTTGATATCGAGTGGGATATCGCGCTTAGTGGTGCGCATGAAAATCC TCCGGCGACGTTCCAACTGGCAGCCGGCAAGTTCGTCTTGGTTCTGCAAA TCTTGCACGGCCAGAAGACGCCGCCGACGGAGCTTCCAGGGTCCTTAGTC GGCCTTCTCGAGGACGCCAGCTTAACTTTCACAGGCGTCGGCATCAATGC AGACTGCACCAGAATCGAGAAGTTCTTCGGCGTTAAAGTAGCACACGCGG TTGACTTGGCCAAGCTAGCCTTGATTCGGAAGGTGCCGCTAGGACTCAAG CGCGGCCTGGCCGACCTATGCTACCATCTGCTTGGTAGAAGCCTCTCCAA GGACGGACGCGTGAGATTTTCGAGGTGGAACCGGAAGGATCTCTCGGAAA AACAGAAGACGTGAGTTTTCAAGTCGTGATTTGCCGTAGGGTTTCTCAGC ATCCTCTTCTTGTGTGTGTGCGCCGCGTGTGTTCAAGAGGTTCGGAGCTG GGGCTGTCTAGAGATACCTTTACGGCCAGGTAAAATCAACCTCCTTGTGC TGTTGGCAAGTTGCCCGCGCGCAAACAGTCTCACCGTATTTTAGCAATAC AATACCGTTATGACATTGCCCCCTCCCCCCCGGGCGCATGCTAAACCCCC TCGTTCGCTTCGTGTTTCCTTCACCAAAGGTATGCCGCATTAGATGCGTA CGTGTCCACCGTTTTGTATTCCTGCATCGAGGAGAAGTCCGATCCGATTT TCAAGGACGGCGAGGACTTGCAAGCTGGAGACCACGTTCGCCTTTACACG AGGACAGGCAACGCGTGTGTTGGGGTGGGCGTGGTGAAAGAGTATGAGGG ACAGGTGTGGGGTAGAACAGGAATCCATCTCGTACCTGCGATGACCACTC GCGCTAGGGTGCGGAGATGGATCGTCCGGGTTGATGAGGTCTTGATGCCG GGCGCGC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig83:670083..671039-

>mRNA_A-nodosum_M_contig83.60.1 ID=mRNA_A-nodosum_M_contig83.60.1|Name=mRNA_A-nodosum_M_contig83.60.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=687bp|location=Sequence derived from alignment at A-nodosum_M_contig83:670083..671039- (Ascophyllum nodosum dioecious)
GGGCTTGATATCGAGTGGGATATCGCGCTTAGTGGTGCGCATGAAAATCC
TCCGGCGACGTTCCAACTGGCAGCCGGCAAGTTCGTCTTGGTTCTGCAAA
TCTTGCACGGCCAGAAGACGCCGCCGACGGAGCTTCCAGGGTCCTTAGTC
GGCCTTCTCGAGGACGCCAGCTTAACTTTCACAGGCGTCGGCATCAATGC
AGACTGCACCAGAATCGAGAAGTTCTTCGGCGTTAAAGTAGCACACGCGG
TTGACTTGGCCAAGCTAGCCTTGATTCGGAAGGTGCCGCTAGGACTCAAG
CGCGGCCTGGCCGACCTATGCTACCATCTGCTTGGTAGAAGCCTCTCCAA
GGACGGACGCGTGAGATTTTCGAGGTGGAACCGGAAGGATCTCTCGGAAA
AACAGAAGACGTATGCCGCATTAGATGCGTACGTGTCCACCGTTTTGTAT
TCCTGCATCGAGGAGAAGTCCGATCCGATTTTCAAGGACGGCGAGGACTT
GCAAGCTGGAGACCACGTTCGCCTTTACACGAGGACAGGCAACGCGTGTG
TTGGGGTGGGCGTGGTGAAAGAGTATGAGGGACAGGTGTGGGGTAGAACA
GGAATCCATCTCGTACCTGCGATGACCACTCGCGCTAGGGTGCGGAGATG
GATCGTCCGGGTTGATGAGGTCTTGATGCCGGGCGCG
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