mRNA_A-nodosum_M_contig83.52.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: D7FZS1_ECTSI (D-aminoacyl-tRNA deacylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS1_ECTSI) HSP 1 Score: 254 bits (650), Expect = 1.580e-82 Identity = 121/170 (71.18%), Postives = 147/170 (86.47%), Query Frame = 3
Query: 297 MKVVIQRVKRASVTVVNEDASTT------LASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSKDMKETT 788
M+VV+QRVKRASV V ++D T + SEIGKGILCLVG+ +GDE+ HAEWLCKQI++AK+FEGMS+ NADKRWRS+VKQNGFE+LLVSQFTLNGRV SKGK+DF GSMPP+EA+E+Y +FV MV +AHAPELVKDGVFGAKM+V+LVNDGP+T++VDS +MK T
Sbjct: 1 MRVVVQRVKRASVAVEHKDGDGTSSEPSSVVSEIGKGILCLVGVKDGDEKGHAEWLCKQIVTAKLFEGMSEANADKRWRSNVKQNGFEILLVSQFTLNGRVCSKGKVDFTGSMPPAEAREFYSRFVDMVKSAHAPELVKDGVFGAKMEVSLVNDGPVTVIVDSGEMKNET 170
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: G4ZH98_PHYSP (D-aminoacyl-tRNA deacylase n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZH98_PHYSP) HSP 1 Score: 147 bits (372), Expect = 4.750e-41 Identity = 75/161 (46.58%), Postives = 109/161 (67.70%), Query Frame = 3
Query: 297 MKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSKDMK 779
MKV++QRV ASV V + + EIGKG+LC VGI D + AEW C+++L+A ++ + +D+ W++S+K NG+EVL+VSQFTL+G+ + K DF +M P AKE+Y+ F V H PE V +GVFGA M+V++VNDGP+T+ ++SKD K
Sbjct: 1 MKVLMQRVTSASVRVEGK-----VVGEIGKGLLCFVGIGHDDTEDDAEWCCRRLLNAHLW----PDESDRAWKTSLKSNGYEVLVVSQFTLHGQFAGN-KPDFHLAMGPGPAKEFYDAFCDRVRREHVPEKVAEGVFGAYMEVSIVNDGPVTMQINSKDRK 151
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: K3WUV9_GLOUD (D-aminoacyl-tRNA deacylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUV9_GLOUD) HSP 1 Score: 145 bits (366), Expect = 3.670e-40 Identity = 78/161 (48.45%), Postives = 108/161 (67.08%), Query Frame = 3
Query: 297 MKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSKDMK 779
M+VV+QRV ASV V E + +IG+G+LCLVGI D + AE+ C+++L+ +I+ + D W++SV NGFEVLLVSQFTL+G S K DF SM P+ AKE++++F V AH + V +GVFGA M+V+LVNDGPIT+ +DSK+ K
Sbjct: 1 MRVVLQRVTSASVRVEGE-----VVGQIGRGLLCLVGIGRDDTEEDAEFCCRRLLNCRIW----PDAKDTPWKTSVLSNGFEVLLVSQFTLHGYFSGN-KPDFHLSMAPTPAKEFFDKFCARVRAAHTADKVAEGVFGAYMEVSLVNDGPITMTIDSKEKK 151
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: A0A3F2RR90_9STRA (D-aminoacyl-tRNA deacylase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RR90_9STRA) HSP 1 Score: 144 bits (364), Expect = 7.550e-40 Identity = 81/163 (49.69%), Postives = 111/163 (68.10%), Query Frame = 3
Query: 297 MKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSKDMKET 785
M+VV+QRV ASV V E + +IGKG+LCLVGI D + +E+ C+++L+A+++ DEN ++ WR+SVK N EVLLVSQFTL+G S K DF SM P++AKE+++ F V H E V +GVFGA M+V+LVNDGPIT+ +DSK+ K T
Sbjct: 1 MRVVMQRVTSASVRVEGE-----VVGKIGKGLLCLVGIGTDDTEEDSEFCCRRLLNARLW---PDEN-ERAWRTSVKSNDLEVLLVSQFTLHGYFSGN-KPDFHLSMSPAKAKEFFDAFCDRVRREHDTEKVAEGVFGAYMEVSLVNDGPITMQIDSKNRKPT 153
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: A0A7S2XSD6_9STRA (D-aminoacyl-tRNA deacylase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSD6_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.550e-39 Identity = 79/175 (45.14%), Postives = 116/175 (66.29%), Query Frame = 3
Query: 264 VIGGTNLT--QDGMKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSKDMKE 782
V+G + LT + M++V+QRVK ASV V + S+ IG GI+ LVG+HE D +A ++ C+++L+AK++ ++EN +WR VKQ EVLLVSQFTL G +S K + D+ SM +A+E Y F+ MVG ++ V+DG+FGA MDV L+NDGP+T+V+DS K+
Sbjct: 43 VLGVSTLTSVEGAMRLVLQRVKSASVRVEGKTISS-----IGPGIMALVGLHEHDTEADLDYCCRKLLAAKLW---ANENG-AQWRHGVKQKNLEVLLVSQFTLYGTLSKKNQPDYKLSMKAVQAQEMYSHFLTMVGKSYDETKVQDGIFGAMMDVELINDGPVTIVIDSDPQKQ 208
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: A0A2D4BDE5_PYTIN (D-aminoacyl-tRNA deacylase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDE5_PYTIN) HSP 1 Score: 142 bits (359), Expect = 4.130e-39 Identity = 76/161 (47.20%), Postives = 106/161 (65.84%), Query Frame = 3
Query: 297 MKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSKDMK 779
M+VV+QRV ASV V E + +IGKG++CLVGI D + AE+ C+++L+A+++ + D W+SSV NG+EVLLVSQFTL G K DF +M P+ AKE+Y F V AH+ + V +GVFGA M+V+LVNDGP+T+ +DS+D K
Sbjct: 1 MRVVLQRVTGASVRVDGE-----VVGQIGKGLVCLVGITREDTEEDAEFCCRRLLNARLW----PDEKDTAWKSSVVSNGYEVLLVSQFTLYGYFQGN-KPDFHLAMAPAPAKEFYHAFCDRVRAAHSADKVAEGVFGAMMEVSLVNDGPVTMTIDSRDRK 151
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: H3G8Z5_PHYRM (D-aminoacyl-tRNA deacylase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G8Z5_PHYRM) HSP 1 Score: 142 bits (359), Expect = 4.250e-39 Identity = 76/161 (47.20%), Postives = 107/161 (66.46%), Query Frame = 3
Query: 297 MKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSKDMK 779
MKVV+QRV ASV V E + +IGKG+LC VGI D + AEW C+++L+A+++ E + + W+ S+K N +EVLLVSQFTL+G+ S K DF SM P AK++Y+ F V + +A + V +G FGA M+VALVNDGPIT+ ++SK+ K
Sbjct: 1 MKVVMQRVTSASVRVEGE-----IVGQIGKGLLCFVGIGHDDTEDDAEWCCRRLLNARLW----PEESGRPWKMSLKSNNYEVLLVSQFTLHGQFSGN-KPDFHLSMSPEPAKKFYDAFCDRVRSEYAADKVSEGEFGAYMEVALVNDGPITMQINSKERK 151
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: A0A250XKL3_9CHLO (D-aminoacyl-tRNA deacylase n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XKL3_9CHLO) HSP 1 Score: 142 bits (359), Expect = 4.380e-39 Identity = 76/158 (48.10%), Postives = 107/158 (67.72%), Query Frame = 3
Query: 297 MKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSK 770
M+ V+QRV+ A V V D S + S IG G+LCL+G+ + D+ A AE++CK+IL ++F +D++ W + V + EVLLVSQFTL R+ K + DF+ +MPP++AKE Y QFV MV + PE VKDGVFGA M+V L NDGP+T ++DS+
Sbjct: 1 MRAVVQRVRSAHVEV---DGS--IVSSIGPGLLCLIGVKDTDQGADAEYICKKILKTRVFP-QNDDSKRAAWDNDVVSHNGEVLLVSQFTLYARLK-KPRPDFSKAMPPTQAKELYSQFVEMVQRDYIPEKVKDGVFGAMMNVTLENDGPVTFILDSE 151
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: A0A6J1JZA6_CUCMA (D-aminoacyl-tRNA deacylase n=5 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JZA6_CUCMA) HSP 1 Score: 142 bits (358), Expect = 5.490e-39 Identity = 75/161 (46.58%), Postives = 104/161 (64.60%), Query Frame = 3
Query: 297 MKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSKDMK 779
M+ V+QRV ASV V D T SEIG G+L L+G+H+ D + AE++C+++L+ ++F +E+ K W +V Q +EVLLVSQFTL G + K DF +MPP AK +Y V G ++ P+ +KDGVFGAKM V LVNDGP+T+ +DSK K
Sbjct: 1 MRAVVQRVASASVEV---DGRTV--SEIGPGLLVLIGVHDSDTDSDAEYICRKVLNMRLF---PNESTSKAWDLNVMQKNYEVLLVSQFTLYG-ILKGNKPDFHVAMPPQTAKPFYSSVVERFGKSYKPDAIKDGVFGAKMKVNLVNDGPVTMQIDSKPSK 152
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Match: A0A7S2Y2I5_9STRA (D-aminoacyl-tRNA deacylase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y2I5_9STRA) HSP 1 Score: 143 bits (361), Expect = 8.070e-39 Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 3
Query: 264 VIGGTNLTQDGMKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLCKQILSAKIFEGMSDENADKRWRSSVKQNGFEVLLVSQFTLNGRVSSKGKIDFAGSMPPSEAKEYYEQFVGMVGTAHAPELVKDGVFGAKMDVALVNDGPITLVVDSK 770
V+ G L M++V+QRVK ASVTV E + S+IG G+L LVG+HE D+Q + CK++L++K++ +++N WR VKQ G EVLLVSQFTL G +S K + D+ +M AK Y +FV MV A+ + VKDGVFGA MDV+LVNDGP+TL+V+++
Sbjct: 18 VLSGKGLA---MRLVLQRVKSASVTVEGE-----VVSQIGPGVLALVGLHEHDQQEDLQDCCKRLLASKLW---ANDNGGM-WRHGVKQRGLEVLLVSQFTLYGTLSKKNQPDYKLAMKNIPAKIMYSEFVEMVKEAYEADKVKDGVFGAMMDVSLVNDGPVTLLVETE 174 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig83.52.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig83.52.1 >prot_A-nodosum_M_contig83.52.1 ID=prot_A-nodosum_M_contig83.52.1|Name=mRNA_A-nodosum_M_contig83.52.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=167bp MKVVIQRVKRASVTVVNEDASTTLASEIGKGILCLVGIHEGDEQAHAEWLback to top mRNA from alignment at A-nodosum_M_contig83:661464..662754- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig83.52.1 ID=mRNA_A-nodosum_M_contig83.52.1|Name=mRNA_A-nodosum_M_contig83.52.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1291bp|location=Sequence derived from alignment at A-nodosum_M_contig83:661464..662754- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig83:661464..662754- >mRNA_A-nodosum_M_contig83.52.1 ID=mRNA_A-nodosum_M_contig83.52.1|Name=mRNA_A-nodosum_M_contig83.52.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=501bp|location=Sequence derived from alignment at A-nodosum_M_contig83:661464..662754- (Ascophyllum nodosum dioecious)back to top |