mRNA_A-nodosum_M_contig83.28.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: D8LEJ9_ECTSI (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ9_ECTSI) HSP 1 Score: 666 bits (1719), Expect = 3.190e-234 Identity = 347/483 (71.84%), Postives = 387/483 (80.12%), Query Frame = 2
Query: 137 LVMVTSYCASPEHQSELEKADGCDGKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVGTETLLDKSKSAKTWLMPLLGEGNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYGGLKNKGA----RYCGGHGGTNSNAP--PAASLTLESFDFVSLHSPYNKLVQKGLARMSFIDYRADPSSGRFKDFHAAEGGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENGGARVLMFSYGSGFVATAYSIKARKPSAGSSAFSLGAMQKAMNIRERLDDRMQRTPKEFALASLLAAMDLREERFGKAGFQPTGETGSLFPGTFYLAEVNDKYHRRYARTSPSA 1567
L M + S QS+LEK DGC+GKYTVGLGQN+LAFVDDREDINSVLMT MQ LLEKYDI+PA IGRLEVGTETLLDKSKSAKTWLMPLLGE NTDVEGVTSYNACYGGSAALFNSVAWVESS WDGR+ALVVCGDIAVYEAGPARPTGGCGAVAML+GP APLVLEPGLR S+HSRD YDFYKPKHSEYAEVDGRLSQSVYLESVDKCY G + K A R G T S P A++T++SFDFVSLH+PYNKLVQKG ARMSF+D+R+DPS+ F+D AA E W V+L TY DRE+DAAFRK SA +FKARCLP VSREVGNCYTASVFAGLVSVVA+KG +LE+ GGARV MFSYGSGF+ATAYS KAR+ + FSLG MQKAM I++RL +R+ R P++FA AM+LRE+ +GKAG+ P+G T +LFPGTFYL EVNDKYHR Y R P A
Sbjct: 33 LAMDMYFPRSYVEQSDLEKTDGCEGKYTVGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDPAKIGRLEVGTETLLDKSKSAKTWLMPLLGESNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLR-STHSRDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFRAKAAARQERLAASSGVTQSGGATTPPAAVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAA--------EGWRTVELGGTYADREIDAAFRKASAGEFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGTALEDGGGARVFMFSYGSGFIATAYSFKARRSTTCRGQFSLGGMQKAMAIKDRLANRLGRRPEDFA-----QAMNLREQTYGKAGYTPSGATDALFPGTFYLTEVNDKYHRSYERVPPQA 501
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: A0A6H5JY59_9PHAE (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY59_9PHAE) HSP 1 Score: 639 bits (1649), Expect = 6.010e-224 Identity = 337/481 (70.06%), Postives = 379/481 (78.79%), Query Frame = 2
Query: 170 EHQSELEKADGCDGKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVG-----TETLLDKSKSAKTWLMPLLGEGNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYGGLKNKGARY---CGGHGGTNSNA--PPAASLTLESFDFVSLHSPYNKLVQKGLARMSFIDYRADPSSGRFKDFHAAEGGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENGGARVLMFSYGSGFVATAYSIKARKPSAGSSAFSLGAMQKAMNIRERLDDRMQRTPKEFALAS----------LLAAMDLREERFGKAGFQPTGETGSLFPGTFYLAEVNDKYHRRYAR 1552
+ QS+LEK DGC+GKYT+GLGQN+LAFVDDREDINSVLMT MQ LLEKYDI+PA IGRLEVG TETLLDKSKSAKTWLMPLLG NTDVEGVTSYNACYGGSAALFNSVAWVESS WDGR+ALVVCGDIAVYEAGPARPTGGCGAVAML+GP APLVLEPGLR S+HSRD YDFYKPKHSEYAEVDGRLSQSVYLESVDKCY G K K A G T S P A++T++SFDFVSLH+PYNKLVQKG ARMSF+D+R+DPS+ F+D AA E W V+L TY DRE++AAFRK SA DFKARCLP VSREVGNCYTASVFAGLVSVVA+KG +LE+ GGARV MFSYGSGF+ATAYS KAR+P+ FSLG MQ+AM I++RL R+ RTP++FA AS + AM+LRE+ +GKAG+ P+G +LFPGTFYL EV +YAR
Sbjct: 6 QRQSDLEKTDGCEGKYTIGLGQNKLAFVDDREDINSVLMTVMQSLLEKYDIDPAKIGRLEVGKEWVGTETLLDKSKSAKTWLMPLLGASNTDVEGVTSYNACYGGSAALFNSVAWVESSEWDGRYALVVCGDIAVYEAGPARPTGGCGAVAMLVGPDAPLVLEPGLR-STHSRDAYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYAGFKAKAAARQDRLAASGVTQSGGVTTPPATVTVDSFDFVSLHAPYNKLVQKGFARMSFLDFRSDPSAEGFRDLPAAAA--------EGWRTVELGGTYADREIEAAFRKASAGDFKARCLPASTVSREVGNCYTASVFAGLVSVVADKGTALEDGGGARVFMFSYGSGFIATAYSFKARRPTTCRGQFSLGGMQEAMGIKDRLARRLGRTPEDFAQASRPFGGHSFYDVTTAMNLREQTYGKAGYTPSGAADALFPGTFYLTEVRRCVRGKYAR 477
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: A0A7S2WPZ4_9STRA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPZ4_9STRA) HSP 1 Score: 442 bits (1138), Expect = 4.190e-147 Identity = 248/459 (54.03%), Postives = 306/459 (66.67%), Query Frame = 2
Query: 176 QSELEKADGCDGKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVGTETLLDKSKSAKTWLMPLLGEGNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYGGLKNKGARYCGGHGGTNSNAPPAASLTLESFDFVSLHSPYNKLVQKGLARMSFIDYRADPSSGRFKDFHAAEGGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENGGARVLMFSYGSGFVATAYSIKARKPSAGSSAFSLGAMQKAMNIRERLDDRMQRTPKEFALASLLAAMDLREERFGKAGFQPTGETGSLFPGTFYLAEVNDKYHRRYAR 1552
Q+ LE DGC GKYT GLGQNRLAFV DREDI SVLMTA+Q LLE++ ++PA +GRLEVGTE+L+DKSKS KT LM L GE N D+EGVTS NACYGG+AAL NSVAWV+S WDGR A+ V GDIAVYEAGPARPT GCGAVAMLIGP APL LEPGLR +SH D YDFYKP HSEY VDG+LSQ+ YL VD CY G K K AR +T++SFD+V +HSPY+KLVQKG AR ++D+ DP+ F + G KV + RE+DAAFR+VSA ++ + LP+ VS+EVGNCYT +VF L+S++++ G + G RV MFSYGSG V++ YS + R P S F+L +Q A+ +R RL +R T +EFA AM+ RE +G+A QP G + G F+L VN+K+HR Y R
Sbjct: 27 QTALEAQDGCAGKYTKGLGQNRLAFVTDREDIASVLMTAVQRLLERFGVDPAHVGRLEVGTESLIDKSKSVKTSLMRLFGE-NKDIEGVTSTNACYGGTAALLNSVAWVQSEDWDGRLAICVAGDIAVYEAGPARPTSGCGAVAMLIGPDAPLALEPGLR-ASHVIDCYDFYKPHHSEYPMVDGKLSQAAYLGCVDACYRGYKAKAARR-------------GEKVTVDSFDYVCMHSPYHKLVQKGFARFLYMDFLDDPTQEGFSEVQHLSGD-----------KVDYNASLESREVDAAFREVSASSYREKILPSSFVSKEVGNCYTGAVFMNLLSLISDVGPGMV---GKRVGMFSYGSGSVSSLYSFRGRIPDTPSE-FTLERIQ-AIGVRGRLAERKSCTSEEFA-----QAMNFREAAYGQAPHQPQGSVEDVPVGAFFLESVNEKHHRSYGR 449
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: A0A7S0NXG5_9EUKA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NXG5_9EUKA) HSP 1 Score: 433 bits (1114), Expect = 2.950e-143 Identity = 247/481 (51.35%), Postives = 320/481 (66.53%), Query Frame = 2
Query: 143 MVTSYCASPEH---QSELEKADGCDGKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVGTETLLDKSKSAKTWLMPLLGEGNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPK-HSEYAEVDGRLSQSVYLESVDKCYGGLKNKGARYCGGHGGTNSNAPPAASLTLESFDFVSLHSPYNKLVQKGLARMSFIDYRADPSSGRFKDFHAAEGGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENGGARVLMFSYGSGFVATAYSIKARKPSA-------GSSAFSLGAMQKAMNIRERLDDRMQRTPKEFALASLLAAMDLREERFGKAGFQPTGETGSLFPGTFYLAEVNDKYHRRYAR 1552
++ + C P++ Q+ELEKADGC+GKYTVGLGQ LAF DDRED+ S+L+ A+ LLEK+D+ P +GRLEVGTETL+DKSKS KT L+ L +G TD+EGV+S NACYGG+AAL NSVAWVESSAWDGR+A+VVCGDIAVY GPARPTGG GAVAMLIG APL L R++H+ +VYDFYKP+ +EYA VDG+LSQ+ YL +VD C+ GLK K GG P +TL+SFDFV LHSPYNKLVQKG AR+ + DF A D S +RW ++ ET DR+ + F ++ P F A+C P+ +SR VGNCYTA+V+ L+S+VA KG+ L+ G RVL+FSYGSG VATA + R A S F+LG + + ++I RL R R + +L +A++LRE R+G AG++P+G L P ++YL+ V++ Y R YAR
Sbjct: 11 ILAAECYWPKNFVPQTELEKADGCEGKYTVGLGQTALAFFDDREDVGSILLNAVANLLEKFDVSPHDVGRLEVGTETLIDKSKSIKTLLLSCLFDGCTDIEGVSSTNACYGGTAALLNSVAWVESSAWDGRYAIVVCGDIAVYAPGPARPTGGGGAVAMLIGADAPLALVGP--RATHAVEVYDFYKPRGDTEYATVDGKLSQAAYLTAVDMCWAGLKLKLRS-----GGALYEREP--DVTLDSFDFVCLHSPYNKLVQKGFARLLY------------GDFTEAADRDEFSGDAQRWRELPAAETVNDRDAEKCFAALAKPRFAAKCAPSETISRHVGNCYTAAVYMNLLSLVAAKGSELQ---GKRVLVFSYGSGAVATALMVVGRGVEAPNGVGKAAGSTFTLGRLAETLDIDTRLAARTCRD-----VPALNSALELREARYGAAGYEPSGSLDDLAPHSWYLSGVDELYRRSYAR 462
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: A0A0M0J637_9EUKA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J637_9EUKA) HSP 1 Score: 427 bits (1097), Expect = 1.530e-140 Identity = 247/484 (51.03%), Postives = 312/484 (64.46%), Query Frame = 2
Query: 137 LVMVTSYCASPEHQSELEKADGCDGKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVGTETLLDKSKSAKTWLMPLLGEGNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPK-HSEYAEVDGRLSQSVYLESVDKCYGGLKNKGARYCGGHGGTNSNAPPAASLTLESFDFVSLHSPYNKLVQKGLARMSFIDYRADPSSGRFKDFHAAEGGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENGGARVLMFSYGSGFVATAYSIKARKPS-----AGSSA-----FSLGAMQKAMNIRERLDDRMQRTPKEFALASLLAAMDLREERFGKAGFQPTGETGSLFPGTFYLAEVNDKYHRRYART 1555
L M + + Q+ LE+ADGC GKYT+GLGQ L + DDRED+ S+L+TA+ L+E Y IEP IGRLEVGTETL+DKSKS KT L+ L N DVEGVTS NACYGG+AAL NSVAWVESSAWDGR+A+VVCGDIAVY GPARPTGG GAVAMLIG APL L R +H+ +VYDFYKPK +EYA VDG+LSQ YL +VD+CY GL+ K A GG A TL++F F +HSPY KLVQKG ARM D A P+ +D AA+ A ++ V + DR+ + RK+SA + A CLP +S VGNCYTA+V+ L+++V+ + A L + VL FSYGSG VATA+ IKARKPS +G+S F++ + + ++ RL R +RT +FA AAMDLR R+G+A + PTG LFPGT+YL V+ ++ R Y+RT
Sbjct: 21 LAMEAYFPQNCLQQTALEEADGCKGKYTIGLGQESLGYFDDREDVASILLTALARLMENYGIEPQQIGRLEVGTETLIDKSKSVKTTLLAHLFGPNADVEGVTSTNACYGGTAALLNSVAWVESSAWDGRYAVVVCGDIAVYAPGPARPTGGGGAVAMLIGADAPLALSGP--RCTHAAEVYDFYKPKGDTEYATVDGKLSQEAYLTAVDRCYAGLQAKRAAAVGG-----------APCTLDAFGFACMHSPYAKLVQKGFARMLLADVIAQPT----RDEWAAD------ADAQKVAAVPPAHSVNDRDTETVLRKLSATRYDAMCLPAGGISTRVGNCYTAAVYMNLLALVSSRAAELVDKE-PDVLCFSYGSGAVATAFVIKARKPSGTNALSGASGLPPVPFTIERIAQTADVFARLASRTERTTADFA-----AAMDLRATRYGQASYSPTGPIAELFPGTYYLVSVDAEHRRSYSRT 475
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: R1CY43_EMIHU (Hydroxymethylglutaryl-CoA synthase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CY43_EMIHU) HSP 1 Score: 427 bits (1098), Expect = 1.560e-140 Identity = 255/484 (52.69%), Postives = 325/484 (67.15%), Query Frame = 2
Query: 176 QSELEKADGCDGKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVGTETLLDKSKSAKTWLMP-LLGEGNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPK-HSEYAEVDGRLSQSVYLESVDKCYGGLKNK-GARYCGGHGGTNSNAPPAASLTLESFDFVSLHSPYNKLVQKGLARM-------------SFIDYRADPSSGRFKDFHAAE--GGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENGGARVLMFSYGSGFVATAYSIKARKPSAGS-------SAFSLGAMQKAMNIRERLDDRMQRTPKEFALASLLAAMDLREERFGKAGFQPTGETGSLFPGTFYLAEVNDKYHRRYAR 1552
Q+ LE+ADGC GKYTVGLGQ LAF DDREDI SVL+TA LLE+Y + + IGRLEVGTETLLDKSKS KT LM L G ++DVEGV+S NACYGG+AAL NSVAWVESSAWDGR+ALVVCGDIAVY GPARPTGG GAVAML+GP APLV+ R++H+ +VYDFYKP+ +EYA VDG+LSQ YL SVD C+ LK K GA G N + PA L +FD+V +HSPYNKLVQKG AR+ S + + G F D A GD+ +RW V +T DRE + F ++ PDF+A+C P+ SR+VGNCYTA+++ L+S+V+ K +SL GAR+L+FSYGSG VATA+++ R+PS GS S F+L + + ERL RT + L +L A++LREER+G+AG++P+G+ G+L PGT+YLA V++ + R Y+R
Sbjct: 24 QTALEEADGCAGKYTVGLGQTALAFFDDREDIASVLLTACARLLERYGVPASAIGRLEVGTETLLDKSKSVKTTLMAQLFGAEHSDVEGVSSTNACYGGTAALLNSVAWVESSAWDGRYALVVCGDIAVYAPGPARPTGGGGAVAMLVGPDAPLVMAGP--RATHAFEVYDFYKPRGDTEYATVDGKLSQDAYLASVDTCWSRLKAKLGAPAAAEQLGLNGS--PA---DLRAFDYVCMHSPYNKLVQKGFARLLYGTAALGQPSATSVLTLSRRAAVGDFADDATAPRFAGDA-----QRWAGVPPAKTVGDREAEKCFVGLAKPDFEAKCAPSDTASRQVGNCYTAALYMNLLSLVSAKASSLM---GARLLLFSYGSGAVATAFTLIGREPSGGSALALPPASPFTLERIATTAQLAERLT---ARTCSD--LPTLTRALELREERYGQAGYEPSGDVGALAPGTYYLAAVDELHRRTYSR 487
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: A0A7S2AZ79_9STRA (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZ79_9STRA) HSP 1 Score: 425 bits (1092), Expect = 9.560e-140 Identity = 243/469 (51.81%), Postives = 309/469 (65.88%), Query Frame = 2
Query: 176 QSELEKADGCDGKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVGTETLLDKSKSAKTWLMPLLGEGNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYGGLKNKGARYCGGHGGTNSNAPPAASLTLESFDFVSLHSPYNKLVQKGLARMSFIDYRADPSSGRFKDFHAAEGGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENG--GARVLMFSYGSGFVATAYSIKARKPSAGSSAFSLGAMQKAMNIRERLDDRMQRTPKEFALASLLAAMDLREERFGKAGFQPTGETGSLFPGTFYLAEVNDKYHRRYARTSPSAVPP 1576
Q+ LE D C GKYT GLGQ RLAFV DREDI SV++TA+ LLE+Y I P +GRLEVGTETL+DKSKS KT LM LLG+ N DVEGV+S NACYGG+AALFNSVAWV+S WDGR+A+V+ GDIAVYEAGPARPT GCG VAML+G APL +EP +R +SH+ D YDFYKP HSEYA VDG LSQ YL VD CY K K S+ + FDF+ HSPY+KLVQKG AR+ + D+ + P S RF+ E D S ++ + E++ RELDA FR ++ DF + P+ S++VGNCYT +VF L S+V+ ++E +G G R+ MFSYGSG VA+ Y++KAR+ + G++ FSL +++ + + ERL+ R Q T +EF AAMDLR E +GKA P+G T SL GTFYL +++ + R Y R AV P
Sbjct: 34 QTLLEVQDDCAGKYTKGLGQERLAFVTDREDITSVMLTALSRLLERYSITPEQVGRLEVGTETLIDKSKSVKTALMQLLGD-NGDVEGVSSTNACYGGTAALFNSVAWVQSEDWDGRYAVVLAGDIAVYEAGPARPTSGCGVVAMLVGSDAPLAMEPKVR-ASHAMDCYDFYKPNHSEYALVDGGLSQKAYLRCVDLCYNRFKAKAKVVL-----------KLESVEMNVFDFMCFHSPYHKLVQKGFARLGYQDFLSAPDSLRFR-----EAADQLS----QFSDLTDEDSLVSRELDAVFRGITKNDFARKVTPSSFTSQQVGNCYTGAVFMNLASLVS----AVESDGLVGKRIGMFSYGSGSVASLYALKARETTTGNN-FSLQRIRETLALEERLNSRTQMTAEEFG-----AAMDLRAEAYGKAPLVPSGSTASLKEGTFYLERIDELHRRSYGRKG--AVEP 468
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: F0XWE9_AURAN (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWE9_AURAN) HSP 1 Score: 419 bits (1078), Expect = 5.150e-138 Identity = 244/464 (52.59%), Postives = 310/464 (66.81%), Query Frame = 2
Query: 176 QSELEKADGCDGKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVGTETLLDKSKSAKTWLMPLLGEGNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPKHSEYAEVDGRLSQSVYLESVDKCYGGLKNKGARYCGGHGGTNSNAPPAASLTLESFDFVSLHSPYNKLVQKGLARMSFIDYRADPSSGRFKDFHAAEGGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENGGARVLMFSYGSGFVATAYSIKARKPSAGSSAFSLGAMQKAMNIRERLDDRMQRTPKEFALASLLAAMDLREERFGKAGFQPTG--ETGSLFP-----GTFYLAEVNDKYHRRY 1546
Q+ LE+ DGC GKY VGLGQ +AFVDDREDI SVL+TA + LL + + PA +GRLEVGTETL+DKSKS KT L+ L G+ + DVEGV+S NACYGG+AAL N+ AWVESSAWDG++A+VVCGDIAVYE GPARP+GGCGAVA+L+GPGAPL LEP R++H+ DV+DFYKP HSE+A VDG+LSQ+ YL SVD C+ GLK K AP A+ TL++FD H+PYNKLVQKG AR++ D D +GR D AA+ +G+A E + DR LDAA RK SA + A+ P + +++GN YTASVFAGL+S+VA++G +L G RVL+FSYGSG VAT Y+ K R+ A + F+LG ++ ++ RL R + FA A D+R ER+GK G+ PTG ET P F LA V+DK+ R Y
Sbjct: 26 QTSLEEQDGCGGKYVVGLGQEAMAFVDDREDIGSVLLTACRRLLTGFGVAPADVGRLEVGTETLVDKSKSVKTTLLQLFGD-HRDVEGVSSVNACYGGTAALLNACAWVESSAWDGKYAVVVCGDIAVYEPGPARPSGGCGAVALLVGPGAPLALEPA--RATHAMDVWDFYKPHHSEFAAVDGKLSQACYLRSVDGCWAGLKRK--------------AP--AATTLDAFDHCVFHAPYNKLVQKGFARLALGD---DVLAGRVADPPAADWCAAGAA--------PYEASLADRGLDAALRKASAGAYDAKVAPATLIPKQIGNTYTASVFAGLLSLVADRGDALA---GKRVLLFSYGSGSVATMYAFKGRE--ADDAKFALGETRRVADVPARLAARAPCSAAHFA-----RACDVRVERYGKPGYAPTGAAETDGAAPVPLAADAFALAAVDDKHIRSY 449
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: A0A7S2NK23_9EUKA (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NK23_9EUKA) HSP 1 Score: 417 bits (1073), Expect = 2.430e-136 Identity = 241/467 (51.61%), Postives = 301/467 (64.45%), Query Frame = 2
Query: 176 QSELEKADGCDGKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVGTETLLDKSKSAKTWLMPLLGEGNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPK-HSEYAEVDGRLSQSVYLESVDKCYGGLKNKGARYCGGHGGTNSNAPPAASLTLESFDFVSLHSPYNKLVQKGLARMSFIDYRADPSSGRFKDFHAAEGGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENGGARVLMFSYGSGFVATAYSIKARKPS------AGSSAFSLGAMQKAMNIRERLDDRMQRTPKEFALASLLAAMDLREERFGKAGFQPTGETGSLFPGTFYLAEVNDKYHRRYART 1555
Q+ LE DGC GKYTVGLGQ +LA+ DDRED+ SVL+ A+ L+E Y I+P +GRLEVGTETL+DKSKS KT L+ L G D+EGVTS NACYGG+AAL NSVAWVESSAWDGR+A+VVCGDIAVYEAGPARPTGG GAVAMLIGP APL + R SH+ +VYDFYKP+ SEYA VDG+LSQ YL++VD+CY GL K + A A TL+SF F +HSPY KLVQKG RM Y AD + G H +E +S A + + ET DR + R +S + P+ +++ VGNCYT +V+ L+S+V+ A L RVLMFSYGSG VATA+ I+AR PS AG F+ + + +I RL R +RT EF AAMDLR R+G G++P+G +LFPG++YL +V+D + R YART
Sbjct: 77 QTALEAQDGCAGKYTVGLGQEKLAYFDDREDVASVLLNALVRLMEGYGIQPEQVGRLEVGTETLVDKSKSVKTTLLAQLFSGCADIEGVTSINACYGGTAALLNSVAWVESSAWDGRYAIVVCGDIAVYEAGPARPTGGGGAVAMLIGPNAPLAVSGP--RCSHAFEVYDFYKPRGDSEYAIVDGKLSQGAYLQAVDECYSGLAKK-------MDAAAAAAGSATRTTLDSFAFACMHSPYVKLVQKGFGRM----YAADMAGGA----HRSEWEESAEA--KALLACSAAETRDDRNHEKTLRSLSQSRYSKMITPSTTITKSVGNCYTGAVYMNLLSLVSSCAAELPSR---RVLMFSYGSGAVATAFCIEARTPSGTNCLTAGGEIFTCARIARVSDIEARLASRTERTVSEFN-----AAMDLRAARYGTKGYEPSGSLEALFPGSYYLDKVDDLHRRTYART 516
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Match: A0A1V9YYU3_9STRA (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYU3_9STRA) HSP 1 Score: 417 bits (1071), Expect = 3.110e-135 Identity = 236/494 (47.77%), Postives = 315/494 (63.77%), Query Frame = 2
Query: 104 SKRNRMFGMHCLVMVTSYCASPEHQSELEKADGCD-GKYTVGLGQNRLAFVDDREDINSVLMTAMQGLLEKYDIEPATIGRLEVGTETLLDKSKSAKTWLMPLLGE-GNTDVEGVTSYNACYGGSAALFNSVAWVESSAWDGRFALVVCGDIAVYEAGPARPTGGCGAVAMLIGPGAPLVLEPGLRRSSHSRDVYDFYKPK-HSEYAEVDGRLSQSVYLESVDKCYGGLKNKGARYC--GGHGGTNSNAPPAASLTLESFDFVSLHSPYNKLVQKGLARMSFIDYRADPSSGRFKDFHAAEGGDSGSAGRERWVKVKLEETYTDRELDAAFRKVSAPDFKARCLPTCHVSREVGNCYTASVFAGLVSVVAEKGASLEENGGARVLMFSYGSGFVATAYSIKARKPSA------GSSAFSLGAMQKAMNIRERLDDRMQRTPKEFALASLLAAMDLREERFGKAGFQPTGETGSLFPGTFYLAEVNDKYHRRYAR 1552
+KR + L M + A+ Q++LE+ DG GKYT GL Q ++ F DRED+NS+ +TA++ LLEKYDI P+ IGRLEVGTET++D KS KT LM L E GN D+EGVTS NACYGG+AALFNSVAWVES AWDGR+ALVVCGDIAVY GPARPT GCGAVAMLIGP APLV+E LR ++ S +++DFYKP HSEY VDG+ SQS YL+++D CY R+C H G N + + D+V HSPYNKL QKG +R+ F D+ +P+ +++ ++W LE+TY DR+LDAA RKVS + P+C SR +GNCYTASV+ L ++ L G R+++FSYGSG V + +S + +PS G+ F++ M +++N+ RL+ RM+RTP+EF A +DLRE+ G ++P +LFPGT+YL E++DK+ R+YAR
Sbjct: 75 NKRALAENVGILGMEVYFPANYIDQADLEQYDGVSAGKYTKGLAQEKMCFTGDREDVNSIALTAVKNLLEKYDIHPSQIGRLEVGTETMVDACKSTKTVLMDLFHEHGNYDLEGVTSVNACYGGTAALFNSVAWVESRAWDGRYALVVCGDIAVYAKGPARPTCGCGAVAMLIGPNAPLVMESELR-TTFSENMWDFYKPDPHSEYPTVDGKFSQSCYLKTLDDCY-------RRFCIKNEHAGVTKNGK---YFDVSANDYVIFHSPYNKLAQKGFSRIIFNDFLRNPTLPQYEPL-------------KKWHGASLEDTYYDRDLDAASRKVSLDMWNRMVEPSCFASRAIGNCYTASVYINLACLIDTARTQLH---GKRIMLFSYGSGAVGSIFSFRVPRPSERQPLDNGAVPFTVERMSESLNLVRRLETRMKRTPEEFN-----AHLDLREKSHGLKSYKPLQSIDTLFPGTYYLVEIDDKHRRKYAR 536 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig83.28.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig83.28.2 >prot_A-nodosum_M_contig83.28.2 ID=prot_A-nodosum_M_contig83.28.2|Name=mRNA_A-nodosum_M_contig83.28.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=489bp MFGMHCLVMVTSYCASPEHQSELEKADGCDGKYTVGLGQNRLAFVDDREDback to top mRNA from alignment at A-nodosum_M_contig83:297992..308672- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig83.28.2 ID=mRNA_A-nodosum_M_contig83.28.2|Name=mRNA_A-nodosum_M_contig83.28.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10681bp|location=Sequence derived from alignment at A-nodosum_M_contig83:297992..308672- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig83:297992..308672- >mRNA_A-nodosum_M_contig83.28.2 ID=mRNA_A-nodosum_M_contig83.28.2|Name=mRNA_A-nodosum_M_contig83.28.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1467bp|location=Sequence derived from alignment at A-nodosum_M_contig83:297992..308672- (Ascophyllum nodosum dioecious)back to top |