mRNA_A-nodosum_M_contig8268.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: D8LJ80_ECTSI (N-deacetylase/N-sulfotransferase (Heparan glucosaminyl) 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ80_ECTSI) HSP 1 Score: 432 bits (1110), Expect = 2.980e-138 Identity = 211/339 (62.24%), Postives = 264/339 (77.88%), Query Frame = 2
Query: 47 MPLVTKGKENVTVPSLIVVGARKSGTASLFRMLGQHPDVASIVPEVYVRGSMGFMAQDPATYPMEAEWAGDRLETELPAEIVGNVLSEYSRPYILAESREEGNDN-KILTTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSELRDKLCVYDESRIDWDDIASSFAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQVKIVDSKKLFSEPEKTAADVAKFAGLS-EHTFFEFGVDRESSCDPRRRSQ-KVSVAYYKRKEAEPNFRKWYADHNDMLAELIGQDFGWNDRIRSGNADP 1054
MP+V ++VT+PS+I+VGAR+SGT++LF ML QHP V S+ PE S GFMAQDP T+P EAEW GD LE ELPA ++G +L E++RPY ++ESR EG D ++TT +SP Y AS LAPYRLK AMPDVK+V++LRDP +RY+SELR+ LC +DW+DI SS+A +ASK YLS+AVLDYSPYDK CLGEGAS +DLW C++G E+SH PLL+GLYA Q+ RW R F SQV +V ++KLF EPEKTAA+VAKFAGL+ EHTFFEF VDRE+SCDPRR+ +V AY KRKE+EP RKWYA+HNDM++EL+G++ GWNDRIRS P
Sbjct: 148 MPVVPLDGKHVTLPSVIIVGARRSGTSTLFSMLSQHPAVGSMAPEPRPELSCGFMAQDPETFPQEAEWPGDNLEKELPASVLGKLLEEFARPYTVSESRHEGVDAPNLVTTAVSPGYFASHLAPYRLKLAMPDVKIVVVLRDPTNRYYSELREALCA---DEVDWEDIMSSYAMPAASKDYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAPQLERWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHTFFEFAVDREASCDPRRKKNPEVVTAYSKRKESEPQLRKWYAEHNDMVSELLGEEMGWNDRIRSAFVSP 483
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: A0A6H5K695_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K695_9PHAE) HSP 1 Score: 367 bits (942), Expect = 2.930e-116 Identity = 175/277 (63.18%), Postives = 219/277 (79.06%), Query Frame = 2
Query: 230 YPMEAEWAGDRLETELPAEIVGNVLSEYSRPYILAESREEGNDNKIL-TTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSELRDKLCVYDESRIDWDDIASSFAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQVKIVDSKKLFSEPEKTAADVAKFAGLS-EHTFFEFGVDRESSCDPRRRSQKVSVAYYKRKEAEPNFRKWYADHNDMLAELIGQDFGWNDRIRSGNADP 1054
+P +AEW GD LE ELPA ++G +L E++RPY ++ESR+EG D IL TT +SP Y +S LAPYRLK A+PDVKVV++LRDP DRY+SELR+ LC +DW+DI SSFA A K YLS+AVLDYSPYDK CLGEGAS +DLW C++G E+SH PLL+GLYA Q+ RW R F SQV +V ++KLF EPEKTAA+VAKFAGL+ EH+FFEF VDRE+SCDPRR++ +V AY KRKE+EP RKWYA+HND+++EL+G++ GWNDRIRS P
Sbjct: 16 FPHDAEWPGDNLEKELPASVLGKLLEEFARPYTVSESRQEGIDGPILVTTAVSPGYFSSHLAPYRLKLAIPDVKVVVVLRDPTDRYYSELREALCA---DEVDWEDIMSSFAMPGACKGYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAAQLDRWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHSFFEFAVDREASCDPRRKNPEVVTAYSKRKESEPQLRKWYAEHNDIVSELLGEEMGWNDRIRSALVSP 289
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: D7G9G8_ECTSI (Putative deacetylase sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G8_ECTSI) HSP 1 Score: 182 bits (463), Expect = 2.400e-46 Identity = 109/288 (37.85%), Postives = 159/288 (55.21%), Query Frame = 2
Query: 47 MPLVTKGKEN--VTVPSLIVVGARKSGTASLFRMLGQHPDVASIVPEVYVRGSMGFMAQDPATYPMEAEWAGDRLETELPAEIVGNVLSEYSRPYILAESREEGNDNKI-------------LTTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSELRDKLCVY--DESRIDWDD-IASSFAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQVKIVDSKKLFSEPEKTAADVAKFAGLSEHTF 856
+PLV E +++P + ++G +K GT +L R L HP V + EV+ F QDP YP W GD E EL +G +LSEY++ + EEG K + E SP Y+ SP+APYR++ +P K+V++LRDP DRYFS+LR +C D + ++ I++ F +K Y+ A Y+PY + C GE A+ +DLW C + A +H PL GLYA Q+ RW RV+D SQ+ ++DS ++F +T A VA++AGL EH F
Sbjct: 118 LPLVAPIGERSLLSIPLITIIGVQKGGTTNLRRNLLTHPLVTGMPNEVH------FFDQDPDIYPKLGHWQGDGREKELSPGAIGRILSEYAKTCL-----EEGKPKKKPAWHKNVAAMSSGVIVESSPRYILSPIAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFK-AMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAVVAEWAGLPEHEF 393
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE) HSP 1 Score: 148 bits (374), Expect = 5.840e-34 Identity = 111/354 (31.36%), Postives = 169/354 (47.74%), Query Frame = 2
Query: 14 AKEAEAESECLMPLVT-----KGKE-NVTVPSLIVVGAR---KSGTASLFRMLGQHPDVASIVPEVYVRGSMGFMAQDPATYPMEAEWAGD-RLETELPAEIVGNVLSEYSRPYILAESREEGNDNKILTTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSELRDKLCVYDESRIDWDDIASS----FAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQVKIVDSKKLFSEPEKTAADVAKFAGLSEHTFFEFGVDRESSCDPRRRSQKVSVA----YYKRKEAEPNFRKWYADHNDMLAELIGQDFGW 1021
A E A ++P+ KG E + ++P I++G + K GT +L L HP ++ + + + DP + EW GD R L + G VLS Y+ + E+ + + + T E +P Y PLAPYR+K +P ++VL+LRDP +RYFS LR +C +S +D + F K YL Y PY +C GE A DL RC + A +H PL GLYA Q+ RW RV+ SQ+ +++S ++F T VA+ GL H + E+ + + P R+ A Y K E + ++WY HN+ L L+G++ W
Sbjct: 186 ATEQSASGNAILPVPIVRPPGKGPEASRSIPLAIIIGTQASAKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFTSDPKS---RHEWRGDGRGGAGLNSSAAGEVLSAYADRAM--EAVDPRKRDTMATVESTPLYFFYPLAPYRMKMVLPAARLVLILRDPTERYFSHLRMMMCWTRDSET-FDHLEKRQKTYFHIPGRVKEYLERGEASYKPYTPLCRGEEARAKDLLRCWK-AMVTHDPLHRGLYADQLERWFRVYPRSQILVLESSEMFGNFTGTLDKVARHIGLPPHGY-EYDSRHQHASAPCERNHPELFAEGGRYQKMLEDQRVLQEWYRPHNERLYRLLGREMPW 531
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: D7G3W4_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W4_ECTSI) HSP 1 Score: 137 bits (345), Expect = 9.630e-33 Identity = 87/235 (37.02%), Postives = 115/235 (48.94%), Query Frame = 2
Query: 368 LTTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSELRDKLCV---------YDESRIDWDDIASSFAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQVKIVDSKKLFSEPEKTAADVAKFAGLSEHTFFEFGVDRESS--CDPRRRSQKVSV-----AYYKRKEAEPNFRKWYADHNDMLAELIGQDFGWN 1024
+T E SP Y+ +PLAPYR+ P ++VL+LRDP DRYFS+LR +C E++ W AG Y+ Y PY +C GE A+ DL C A+ H PLL GLYA Q+ RW RVFD SQ+ IVDS + + ADVA GL F + S+ C R + Y K E E FR+WY HN+ L +L+G+ W+
Sbjct: 12 VTVESSPRYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKTNQTFERVQENQATWFHSPGDAAG------YIDGGEATYEPYTPLCRGENATTEDLRDCYR-AQLPHHPLLRGLYADQLERWFRVFDKSQILIVDSANMMEDLPGVLADVAAHIGLPGSDFDSDRPVQHSTGLCPALGRGEDPDFFGEEGRYDKMLEEEDLFREWYRPHNERLFKLLGRSMMWD 239
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: D7FST9_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST9_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.200e-31 Identity = 100/291 (34.36%), Postives = 144/291 (49.48%), Query Frame = 2
Query: 14 AKEAEAESECLMPLVT-----KGKE-NVTVPSLIVVGARKSGTASLFRMLGQHPDVASIVPEVYVRGSMGFMAQDPATYPMEAEWAGD-RLETELPAEIVGNVLSEYSRPYILAESREEGNDNKILTTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSELRDKLC-VYDESRIDW--DDIASSFAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQVKIVDSKKLFSEPEKTAADVAKFAGLSEHTF 856
A E A ++P+ KG E + ++P I++G +K GT +L L HP ++ + + + DP EW GD R L G VLS Y+ + A + + + T E SP YL PLAPYR++ +P ++VL+LRDP +RYFS LR +C D D + + + F K YL + Y PY +C GEGA DL RC + A +H PL GLY Q+ RWLRV+ SQ+ +V+S ++F + T VA+ GL H F
Sbjct: 244 ATEQSASGNAILPVPIVRPPGKGPEASRSIPLAIIIGTQKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFPSDPNK--KRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAV--DPSKRDTMATVESSPLYLFFPLAPYRMRMVLPAARLVLILRDPTERYFSHLRMMMCGTRDGETFDQLEERLETYFHIPGRVKEYLEQGEASYKPYTPLCRGEGARAKDLLRCWK-AMVTHDPLHRGLYVDQLERWLRVYPRSQILVVESSEMFGDFTGTLNQVARHIGLPPHDF 529
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: A0A6H5KC11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC11_9PHAE) HSP 1 Score: 109 bits (272), Expect = 4.440e-24 Identity = 59/134 (44.03%), Postives = 79/134 (58.96%), Query Frame = 2
Query: 368 LTTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSELRDKLCVYDESR-IDWDDIASSFAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQV 766
+T E SP Y+ +PLAPYR+ P ++VL+LRDP DRYFS+LR +C ++ + A+ F + Y+ A Y PY +C GE A+ DL +C A+R H PL GLYA Q+ RW RVFD SQV
Sbjct: 12 VTVESSPTYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKANQTFEGVKEAAWFHSPGDAAGYIDGAEATYEPYTPLCRGEKATAMDLRKCSR-AQRRHHPLFRGLYADQLERWFRVFDKSQV 144
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: UPI001D138102 (sulfotransferase domain-containing protein n=3 Tax=Microcoleaceae TaxID=1892252 RepID=UPI001D138102) HSP 1 Score: 102 bits (253), Expect = 3.110e-20 Identity = 85/313 (27.16%), Postives = 129/313 (41.21%), Query Frame = 2
Query: 86 PSLIVVGARKSGTASLFRMLGQHPDVASIVPEVYVRGSMGFMAQDPATYPMEAEWAGDRLETELPAEIVGNVLSEYSRPYILAESREEGNDNKILTTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSELRDKLCVYDESRIDWDDIASSFAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQVKIVDSKKLFSEPEKTAADVAKFAGLSEHTFFEFGVDRESSCDPRRRSQKVSVAYYKRKEAEPNFRKWYADHNDMLAELIGQDFGWN 1024
P I++GA+K GT SL+ L +HP +A + + F Q P Y R + PA ND +T E SP Y+ P P R+ P VK++ LLR+PVDR S + + ES D IA+ A + L A +Y Y+ + H L G+YA Q+ W+++F SQ+ I+ S+ L++ P +T V +F L H +G + P +S A Y++ R ++ HN LA+L +DFGW+
Sbjct: 19 PDFIIIGAQKGGTTSLYAYLTKHPQIAHATEKEVHYFDLKF-DQGPEWY---------RAQFPQPA-----------------------NDTDKVTGEASPYYIFHPRVPARIHDLCPQVKIIALLRNPVDRAISHYYHYIRIEYESLSLEDAIAAEPARLKGELEKLL-ANPNYHSYEY--------------------QHHSYLSRGIYADQLPAWMKLFPPSQMLIIKSEDLYANPSETVNKVLEFLDLPPHQLENYGKHNSNEYPP------ISEAVYEQ------LRAYFRPHNQRLAQLCDRDFGWD 265
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: A0A7C3MXT3_9DELT (Sulfotransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3MXT3_9DELT) HSP 1 Score: 101 bits (251), Expect = 5.020e-20 Identity = 90/319 (28.21%), Postives = 135/319 (42.32%), Query Frame = 2
Query: 83 VPSLIVVGARKSGTASLFRMLGQHPDVASIVPEVYVRGSMGFMAQDPATYPMEAEWAGDRLETELPAEIVGNVLSEYSRPYILAESREEGNDNKILTTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSE--LRDKLCVYDESRIDWDDIASSFAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQVKIVDSKKLFSEPEKTAADVAKFAGLSEHTFFEFGVDRESSCDPRRRSQKVSVAYYKRKEAEPNFRKWYA----DHNDMLAELIGQDFGW 1021
+P +++GA++ GT SL+ L QHP VA R + F + Y W T L A + ++ RP +LT E SP YL P AP R++ +P K+++LLR+P++R +S L KL V D SF +S E + D+ L + + R H L +G+YA Q+ W +F Q+ I+ S+ LFS+P T V F L +P + ++ Y K +P+ RKW A DHN L +L+G+DFGW
Sbjct: 4 LPDYVIIGAQRCGTTSLYNYLAQHPFVAPAF-----RKEVHFFDLN---YDKGLSWYRANFPTVLSARLFER---KHGRP--------------LLTGEASPYYLFHPHAPRRIRQHLPGAKLIVLLRNPIERAYSHYNLARKLGVED----------LSFEEGLKKESERLEGEVSKMLRDEFYLSK-------------SHRHHSYLQKGIYADQLKTWFDLFPREQILILKSEDLFSDPSTTFRQVLDFLHLP-------------PWEPPEYEKYNALEYQK---IDPSTRKWLAEYFQDHNQRLYDLLGRDFGW 258
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Match: A0A2G4EW06_9CYAN (Sulfotransferase n=2 Tax=Tychonema TaxID=54312 RepID=A0A2G4EW06_9CYAN) HSP 1 Score: 100 bits (249), Expect = 8.270e-20 Identity = 82/313 (26.20%), Postives = 129/313 (41.21%), Query Frame = 2
Query: 86 PSLIVVGARKSGTASLFRMLGQHPDVASIVPEVYVRGSMGFMAQDPATYPMEAEWAGDRLETELPAEIVGNVLSEYSRPYILAESREEGNDNKILTTELSPAYLASPLAPYRLKGAMPDVKVVLLLRDPVDRYFSELRDKLCVYDESRIDWDDIASSFAGVSASKSYLSEAVLDYSPYDKVCLGEGASPSDLWRCKEGAERSHRPLLEGLYAVQIARWLRVFDASQVKIVDSKKLFSEPEKTAADVAKFAGLSEHTFFEFGVDRESSCDPRRRSQKVSVAYYKRKEAEPNFRKWYADHNDMLAELIGQDFGWN 1024
P I++GA+K GT SL+ L QHP +A + + F A+W S++ +P E KI T E SP Y+ P P R+ P+VK+++LLR+PVDR S Y RI+++ ++ A S K E +K+ + + H L G+YA Q+ W+++F Q+ I+ S+ L++ P +T V F L +G + P +S A Y++ R ++ HN LAEL +DFGW+
Sbjct: 8 PDFIIIGAQKGGTTSLYAYLTQHPQIAHATQKEVHYFDLNF--------DKGADW----------------YYSQFPQP--------ENGPYKI-TGEASPYYIFHPHVPGRMHDLCPEVKIIVLLRNPVDRAISHY------YHYIRIEYESLSLEEAIASEPKRLKGEI-------EKLLANPNYYSYE--------HQHHTYLKRGIYADQLPLWMQLFPKEQILIIKSEDLYTNPSETVNTVLDFLDLPPQQLETYGKHNSNEYPP------ISEAVYEQ------LRAYFRSHNQRLAELCDRDFGWD 254 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8268.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8268.1.1 >prot_A-nodosum_M_contig8268.1.1 ID=prot_A-nodosum_M_contig8268.1.1|Name=mRNA_A-nodosum_M_contig8268.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=344bp MPLVTKGKENVTVPSLIVVGARKSGTASLFRMLGQHPDVASIVPEVYVRGback to top mRNA from alignment at A-nodosum_M_contig8268:3083..9751- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8268.1.1 ID=mRNA_A-nodosum_M_contig8268.1.1|Name=mRNA_A-nodosum_M_contig8268.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6669bp|location=Sequence derived from alignment at A-nodosum_M_contig8268:3083..9751- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8268:3083..9751- >mRNA_A-nodosum_M_contig8268.1.1 ID=mRNA_A-nodosum_M_contig8268.1.1|Name=mRNA_A-nodosum_M_contig8268.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1032bp|location=Sequence derived from alignment at A-nodosum_M_contig8268:3083..9751- (Ascophyllum nodosum dioecious)back to top |