mRNA_A-nodosum_M_contig826.18.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: D8LFH3_ECTSI (Glucosylceramidase, family GH30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH3_ECTSI) HSP 1 Score: 363 bits (933), Expect = 2.520e-118 Identity = 166/243 (68.31%), Postives = 202/243 (83.13%), Query Frame = 1
Query: 1 KVMDAYFGPDGIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEALKRQENLQLFISPWSPPKWMKVPVNGVQSMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSKYVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQILDD-DKFVL 726
+V+DAYFGP+GIEY+VGRIPM SCDFSVEQYSF +VPGDYNL++FD VEKD QRIPM+ AL R+E+L+LF SPWSPP WMK P +GVQSM+ SA P+GL ADP VHAAWAL+FS+FI+AYKEQG+D+WGLT+QNE E GPWEAC YT S+QA FIRD+LGPVIRRDHPDVKI+A+DH+R HL W +EMM +EET++YVDG+ FHWY A LLDG++GW A++ H +L DKF+L
Sbjct: 173 QVLDAYFGPNGIEYSVGRIPMGSCDFSVEQYSFDEVPGDYNLTHFDDGVEKDTAQRIPMLLSALARREDLKLFTSPWSPPAWMKEPKDGVQSMIESALPQGLLADPGVHAAWALFFSRFISAYKEQGVDLWGLTIQNESENPGPWEACVYTPSSQAKFIRDHLGPVIRRDHPDVKIMAFDHNRDHLVTWAEEMMSNEETAQYVDGMAFHWYVASWNRLLDGSMGWGALNTTHNLLSGRDKFIL 415
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: A0A835Z8L7_9STRA (Glucosylceramidase, family GH30 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L7_9STRA) HSP 1 Score: 322 bits (825), Expect = 1.740e-103 Identity = 148/247 (59.92%), Postives = 190/247 (76.92%), Query Frame = 1
Query: 4 VMDAYFGPDGIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEALKRQENLQLFISPWSPPKWMKVPV---NGV--QSMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSKYVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQIL-DDDKFVL 726
V+DAYFGPDGI YT+GRIPM SCDFSVEQY++ DVPGDY++ +FD ++E D +QR+PMI EALKRQ NL+LF+SPWSPP WMK P +GV QSM+ S+ P+GL DPRV AWALYFSKFI+AYK G+DMWG+T+QNEPE GPWEAC Y AS+ F+RD+LGPV+R DHP+++I+AYDH++ H+ WT+ +M D T+KY+DG+ FHWY+ LDG+ GW V+ A +L KF+L
Sbjct: 69 VIDAYFGPDGIGYTIGRIPMGSCDFSVEQYNYDDVPGDYSMEHFDNNIEYDQKQRVPMIKEALKRQPNLKLFMSPWSPPAWMKYPTKDKDGVYRQSMIESSYPQGLLDDPRVKHAWALYFSKFISAYKALGVDMWGVTIQNEPENPGPWEACVYNASSTGAFLRDHLGPVLREDHPELQIMAYDHNKDHMVAWTQILMHDPATAKYLDGMAFHWYYGGMDRGLDGSYGWGNVEEAGALLLPHGKFML 315
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: W4G5S9_9STRA (Ricin B-type lectin domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G5S9_9STRA) HSP 1 Score: 252 bits (644), Expect = 3.220e-76 Identity = 129/244 (52.87%), Postives = 168/244 (68.85%), Query Frame = 1
Query: 1 KVMDAYFGPD-GIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEALKRQENLQLFISPWSPPKWMKVPVN-GVQSMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSKYVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQILDDDKFVL 726
+V+ YF G Y+ GR+PM+SCDFSV YSF DV GD +L++FDT+V KD E IP++H AL+R+ +L+LF+SPWSPP WMK+P + G SM GSA P G+ +P AAWALYFSKFI+AYK GI WGLT QNEP PWEAC + A ++A F+ D+LGP IR+DHPDVKI+ +DH+R +T+W + S+YVDG+ FHWY D LDGA+ +N ++ H LD K VL
Sbjct: 157 EVLRLYFDEKTGAAYSFGRVPMNSCDFSVGSYSFDDVVGDVSLAHFDTNVTKDTESIIPLLHRALQRRPDLKLFLSPWSPPAWMKLPNDKGKYSMTGSATPLGI--NPIYQAAWALYFSKFISAYKHHGIAFWGLTPQNEPMFPAPWEACFWEAHSEATFVGDFLGPQIRKDHPDVKILVFDHNRDAVTEWAAAAYA--KASEYVDGVAFHWYNGDG-RELDGALYYNHLNDTHH-LDPSKLVL 394
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: A0A7S2V2A4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2A4_9STRA) HSP 1 Score: 250 bits (639), Expect = 3.280e-75 Identity = 118/246 (47.97%), Postives = 164/246 (66.67%), Query Frame = 1
Query: 1 KVMDAYFGPDGIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEALKRQEN--LQLFISPWSPPKWMKVPV--NGVQSMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSKYVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQILDDDKFVL 726
KV++AYFG DGI Y+VGR+ ++SCDFS+ Y+F DV D+ L +FD++V DA IP I A + + +++F SPWSPP+WMKVPV N +M GSA P GL DPR H +WALYFSK++TAYK GID+WG+T+QNEP PW+AC +T DF RD+LGP+++ +HP+VKI+ +DH++ + +W + + D E DG+ FHWY L+DG G+ + R H L DKF+L
Sbjct: 156 KVLEAYFGEDGIGYSVGRVHINSCDFSMASYNFDDVEDDFELEHFDSNVTHDAALLIPFIKAANAKNKYGPMKIFASPWSPPEWMKVPVDKNDKMTMKGSAWPVGLKNDPRYHRSWALYFSKWLTAYKNHGIDIWGVTIQNEPLFAAPWDACVWTPEYMRDFARDFLGPMLKENHPEVKIMGFDHNKDLVVEWAEILYADPEARAVFDGMAFHWYGGGVDRLIDGTYGYAMLQRLHN-LAPDKFIL 400
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: A0A8K1CG86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG86_PYTOL) HSP 1 Score: 249 bits (637), Expect = 3.800e-75 Identity = 126/246 (51.22%), Postives = 164/246 (66.67%), Query Frame = 1
Query: 1 KVMDAYFGPD-GIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEALKRQENLQLFISPWSPPKWMKV--PVNGVQ-SMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSKYVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQILDDDKFVL 726
+V+ YF + G Y GR+PM SCDFSV YSFA+V D L++FDT+V D + IP I AL++ L+LF++PWSPP WMK P +G + SM+GSAAP GL +P AAWALYFSK+ITAYK QGI WGLT QNEPE PWEAC Y AS QADF+ ++LGPVIRRDHPDVKI+ +DH+R + W + + + YVDG+ FHWY D +DG ++ H + D+++F+L
Sbjct: 160 EVLKLYFDKEEGSGYEFGRVPMGSCDFSVSSYSFAEVANDTELTHFDTEVTHDTKILIPFIKRALEKNPKLKLFLAPWSPPAWMKQGDPAHGYEPSMLGSAAPNGL--NPDYRAAWALYFSKYITAYKNQGIPFWGLTPQNEPEFAAPWEACLYKASYQADFVGEFLGPVIRRDHPDVKIMIFDHNRASVLHWAQTIYNHPKAKDYVDGMAFHWY--DDERYMDGVEFHERLNDTHYV-DENRFML 400
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: K3XD95_GLOUD (Glyco_hydro_30 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XD95_GLOUD) HSP 1 Score: 243 bits (619), Expect = 7.770e-75 Identity = 123/244 (50.41%), Postives = 158/244 (64.75%), Query Frame = 1
Query: 1 KVMDAYFGP-DGIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEALKRQENLQLFISPWSPPKWMKVPVNG-VQSMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSKYVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQILDDDKFVL 726
+V+ YF DG Y GR+PM SCDFSV YSF DV D +S+FD+ V D + IP I AL++ L++F++PWSPP WMK V SM+GS P GL D + AAWALYFSKFI+AYK GI+ WGLT QNEP+ PWEAC Y AS QADFI YLGPVI+RDHPDVKI+ +DH+R ++ +W ++ E KYVDG FHWY D ++DG ++ H + D+ +F+L
Sbjct: 162 EVLKLYFDKEDGAAYEFGRVPMGSCDFSVGSYSFNDVANDTTMSHFDSSVGHDTKLLIPFIQRALEKNPKLKMFLAPWSPPAWMKRGSEMYVPSMLGSVTPVGLRDD--MQAAWALYFSKFISAYKNYGINFWGLTPQNEPQFAAPWEACGYDASYQADFIGSYLGPVIKRDHPDVKIMVFDHNRGNVQQWASTVLNHPEARKYVDGTAFHWY--DNERVVDGVQFHEHLNDTHYV-DESRFIL 400
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: A0A024TDU2_9STRA (Ricin B-type lectin domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TDU2_9STRA) HSP 1 Score: 246 bits (628), Expect = 7.260e-74 Identity = 127/244 (52.05%), Postives = 164/244 (67.21%), Query Frame = 1
Query: 1 KVMDAYFGPD-GIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEALKRQENLQLFISPWSPPKWMKVPVN-GVQSMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSKYVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQILDDDKFVL 726
+V+ YF G Y+ GR+PM+SCDFSV YSF DV GD +L +FDT+V DAE IP + ALK + +++LF+SPWSPP WMK P + G SM GSA P G+ +P AAWALYFSKFI+AYK GI+ WGLT QNEP PWEAC Y A ++A F+ D+LGP IR+DHPDVKI+ +DH+R +T+W E+ S YVDG+ FHWY D LDGA+ +N ++ H L+ K +L
Sbjct: 158 EVLRLYFDEKTGAAYSFGRVPMNSCDFSVASYSFDDVVGDVSLEHFDTNVTHDAEAIIPFLRRALKLRPDIKLFLSPWSPPAWMKAPNSKGEFSMTGSATPLGI--NPTYQAAWALYFSKFISAYKGHGINFWGLTPQNEPMFPAPWEACFYEAKSEATFVGDFLGPQIRKDHPDVKILVFDHNRDAVTQWAAAAY--EKASAYVDGVAFHWYNGDG-RELDGALYYNHLNDTHH-LNPSKLLL 395
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: A0A7R9UG94_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG94_9STRA) HSP 1 Score: 242 bits (618), Expect = 2.460e-73 Identity = 121/242 (50.00%), Postives = 159/242 (65.70%), Query Frame = 1
Query: 4 VMDAYFGPDGIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEALKRQEN-LQLFISPWSPPKWMKVPVN------GVQSMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSK-YVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQIL 705
V+ YF G+ YT+GR+ M+SCDFS E YSF DV GD++LS+FD +V D ++ IP I A N LQ+F SPWSPP WMKVPV VQSM+ SA P GL DP+V AWA YF +FI AYK GI+MWG+TVQNEPE PWEAC Y ASA+ +F+ ++LGP ++ PD+KI A+DH++ L WT+ + D ++ Y+DG+G+HWY LDG G+N + RA Q +
Sbjct: 126 VLALYFTNAGLGYTLGRVHMNSCDFSPESYSFDDVHGDFDLSHFDDNVSHDQQKMIPFILAAQAVSLNKLQVFASPWSPPAWMKVPVTPKGSSEAVQSMLNSADPRGLLPDPQVQQAWANYFVRFIAAYKASGINMWGVTVQNEPEFAAPWEACKYNASAEMEFVGNFLGPTLKGAFPDIKIFAFDHNKDALAMWTEAVFGDGSPARDYLDGMGYHWYAGGMDRRLDGTQGYNNLKRAAQAM 367
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: A0A1W0A6V1_9STRA (Glucosylceramidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6V1_9STRA) HSP 1 Score: 249 bits (636), Expect = 2.260e-72 Identity = 126/244 (51.64%), Postives = 159/244 (65.16%), Query Frame = 1
Query: 1 KVMDAYFGPD-GIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEALKRQENLQLFISPWSPPKWMKVP-VNGVQSMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSKYVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQILDDDKFVL 726
+++ YF P+ G YT GRIPM+SCDFS YSF +VP D NL +FD V DAE IP I ALK+Q N++LF+SPWSPP WMK P NGV M+GSA P GL R WALYFSKFI AYK I WG+T QNEP++ PWEAC Y + QADFI +LGP +RRDHP+VKI+ +DH+R ++ W + + R + ++Y+DG+ FHWY D LDG V+ H L DKF+L
Sbjct: 782 ELLKLYFDPETGSAYTFGRIPMNSCDFSPGTYSFDEVPNDKNLDHFDMTVAHDAEAIIPFIQGALKKQPNMKLFLSPWSPPAWMKYPNSNGVLDMLGSATPYGL--QHRYRQTWALYFSKFIQAYKSHNISFWGVTPQNEPQQHAPWEACLYDDAYQADFIGHFLGPRLRRDHPEVKILMFDHNRGNVQMWAEAVYRHHQATEYIDGVAFHWY--DNTRDLDGVQNHEHVNDTHN-LHPDKFLL 1020
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Match: F0YG23_AURAN (Ricin B-type lectin domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG23_AURAN) HSP 1 Score: 247 bits (631), Expect = 4.530e-72 Identity = 117/253 (46.25%), Postives = 161/253 (63.64%), Query Frame = 1
Query: 1 KVMDAYFGPDGIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDAEQRIPMIHEAL----KRQENLQLFISPWSPPKWMKVPVN--------------GVQSMVGSAAPEGLCADPRVHAAWALYFSKFITAYKEQGIDMWGLTVQNEPEKTGPWEACAYTASAQADFIRDYLGPVIRRDHPDVKIVAYDHDRVHLTKWTKEMMRDEETSKYVDGIGFHWYFADTWLLLDGAIGWNAVDRAHQIL 705
+V++ Y+G DGI Y++GR+ M+SCDF V Y FA V GD++L +FD V D + IP++ A +R + +LF SPWSPP W+K P G +SM+ SA P+GL D + HAAWALYFSKF +AY+ QG+ +WG TVQNEPE + PWEAC YTA++ F+RD+LGP ++ DHP +K+ +DH+R H+ W + + D ET+K+VDG+ FHWY LDGA+G V RA L
Sbjct: 479 EVVEKYWGEDGIGYSLGRVHMNSCDFCVASYDFAPVDGDFSLDHFDHSVTHDRAEMIPLMAAARAATERRGGDFKLFASPWSPPAWLKAPRKKFEPDPDHPSIEFPGNRSMLSSAQPDGLAHDEQAHAAWALYFSKFASAYEAQGLPLWGFTVQNEPEFSAPWEACRYTANSTGAFVRDFLGPRLKSDHPHLKLFVFDHNRDHMVDWARAVYGDAETAKFVDGVAFHWYAGGLDRTLDGAVGHANVARARDAL 731 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig826.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig826.18.1 >prot_A-nodosum_M_contig826.18.1 ID=prot_A-nodosum_M_contig826.18.1|Name=mRNA_A-nodosum_M_contig826.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=240bp MDAYFGPDGIEYTVGRIPMDSCDFSVEQYSFADVPGDYNLSYFDTDVEKDback to top mRNA from alignment at A-nodosum_M_contig826:82389..87581+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig826.18.1 ID=mRNA_A-nodosum_M_contig826.18.1|Name=mRNA_A-nodosum_M_contig826.18.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5193bp|location=Sequence derived from alignment at A-nodosum_M_contig826:82389..87581+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig826:82389..87581+ >mRNA_A-nodosum_M_contig826.18.1 ID=mRNA_A-nodosum_M_contig826.18.1|Name=mRNA_A-nodosum_M_contig826.18.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=720bp|location=Sequence derived from alignment at A-nodosum_M_contig826:82389..87581+ (Ascophyllum nodosum dioecious)back to top |