mRNA_A-nodosum_M_contig823.65.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig823.65.2
Unique NamemRNA_A-nodosum_M_contig823.65.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: D7FNM5_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNM5_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 1.820e-142
Identity = 243/414 (58.70%), Postives = 280/414 (67.63%), Query Frame = 1
Query:  262 MTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYA-----------AATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFAGGDGRFAFVPFLDMANHGFA-PSTNFTF-----EDPGAFRLRAMRDIRAGEEVTISYGERLDAEQLMVQYGFPVPPMVLISRPL-GDPASRRDRSSTAMPVPGGKEGERTSSTLE-------------------------------GDAYRLDLMDELFMRGQQRFAREAGGDNQRFEVLVRRAIPLIPTIATMLEESSGAGR---ATKARACLEELQAYRSDNFSTSEEQDRELLAYCVGEGEGKVDQRLADVVRYRVGRKEAHSMAVDILEEY 1347
            MTWDVRLALALLEATSDPQ+GG+ W VYGRLLPQPHT+TVPFCLPERLL QLHN GMA+RAR+QVER+RSLYP  MRTLLSHP+TAVYA           AA E     +    A  E+D  PMAL WAFAMVRSRAFA    RFAFVPFLDMANHGFA P+ NFT+       PG F+L+AMR+I AGEEVTISYGE+L+AEQLMVQYGFP PP V +  PL G  A  RD  + A        G  T++                                   +A R+ LM+ELF+R QQRFAREAGGD +RFE+ VR+ +PL+P IAT + E  G G       A   LEELQAYRS+NF ++EEQDRELL+YC+G G GKVD RLADVVRYR+GRKEAHS A  ILEE+
Sbjct:    1 MTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRSLYPDLMRTLLSHPKTAVYATRKTAEGEAAAAAGETATAAATKEAAEKETDAVPMALLWAFAMVRSRAFAADGDRFAFVPFLDMANHGFADPAANFTYISGGESQPGVFQLQAMRNISAGEEVTISYGEQLNAEQLMVQYGFPAPPNVPLELPLCGSDALVRDTVAVATEEVKETAGAATATAXXXXXVXXXXXXXXXXXXXXXXXXXXRGSRGALSEAERVGLMNELFLRAQQRFAREAGGDERRFEIGVRKVLPLVPPIATKIGELMGDGEDGMIKGAELYLEELQAYRSENFPSTEEQDRELLSYCLGNGRGKVDPRLADVVRYRLGRKEAHSTAAGILEEF 414          
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: A0A835YIR1_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR1_9STRA)

HSP 1 Score: 284 bits (726), Expect = 1.090e-87
Identity = 176/428 (41.12%), Postives = 235/428 (54.91%), Query Frame = 1
Query:  106 QGQQVVLEVPSRACLWSNRDGVVSVLYGQSDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFAGGDGRFAFVPFLDMANHGFAPSTNFTFEDP-GAFRLRAMRDIRAGEEVTISYGERLDAEQLMVQYGF-------PVPPMVLISRPLGDPASRRDRSSTAMPVPGGKEGERTSSTLEGDAYRLDLMDELFMRGQQRFAREAGGDNQRFEVLVRRAIPLIPTIATMLEESSGAGRATKARACLEELQAYRSDNFSTSEEQDREL---LAYCVGEGEGKVDQRLADVVRYRVGRKEAHSMAVDILEEYISS 1356
            Q  + VL +P   CLWSNRDGVV  L GQ+DLCW+ AGDLRDPV D  +A+G+TWDVRLALAL +AT+D  +GGQ W +YGRLLP PH +TVP CLP  LL ++ +  +A+RA+ Q +RL  L+P  M+T ++HPRTA Y+A           GP   +S   P AL WAFA+VRSRAF+ G+ +FAFVPFLDMANH   P+ NFTF+   G+F+L A+ D++A  +V ISYG+ LD  +L  QYGF       P PP      PL D  ++  +  +A  +   K  E  S   E    RL                            V +   ++      L  +S A   T A   L  +Q+Y    F TS E+D  L   +    G G   VD+R    + YR+ RK+ H +A D+L   + S
Sbjct:    5 QAAEDVLVIPGNLCLWSNRDGVVGGLQGQTDLCWDQAGDLRDPVDDTSYAKGLTWDVRLALALQDATADIAVGGQFWDLYGRLLPAPHEVTVPLCLPSALLKEMQHAQLARRAQAQKDRLSGLFPLMMQTHMAHPRTACYSAL----------GPGVLQS--LPFALQWAFALVRSRAFSAGNDQFAFVPFLDMANHNSNPNANFTFDSAIGSFKLTALTDVKADSQVYISYGQALDDGKLATQYGFCVASDENPNPP------PLADMTAKGPQLMSAADLL--KFEELLSDASEAHFKRLGTS----------------------STTVPQHYYIVCAKLAQLAAASHAHPPTAAAQLLAGIQSYCKAEFPTSLEEDLALQSRILAAAGSG-ANVDERFLFALEYRMRRKDTHMLATDLLGLIVGS 389          
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: A0A7S4D535_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D535_HETAK)

HSP 1 Score: 218 bits (555), Expect = 3.910e-61
Identity = 158/461 (34.27%), Postives = 228/461 (49.46%), Query Frame = 1
Query:    4 VFDLLAKNAGVEKKVSLGVVSGGLRGLVADCDVEQGQQVVLEVPSRACLWSNRDGVVSV-LYGQSDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFAGGDGRFAFVPFLDMANHGFAPSTNFTF-EDPGAFRLRAMRDIRAGEEVTISYGERLDAEQLMVQYGFPVPPMVLISRPLGDP--ASRRDRSSTAMPVPGGKEGERTSSTLEGDAYRLDLMDELFMRGQQRFAREAGGDNQRFEVLVRRAIPLIPTIATMLEESSGAGRATKARACLEELQAYRSDNFSTSEEQDRELLAYCVGEGEGKVDQRLADVVRYRVGRKEAHSMAVDILEEYISSLEASER 1374
            +++ L    GVE +  L   + G R + A      G+ ++L +P R C+W+NRDG +   L GQSD+ W  AGDLR    D   A+G+TWD+RLA+ALLEA S+ +  G  W VYG +LP PHT+T+P C P+ L  ++ N  M K A +Q  RL S YP  ++    HP+  +Y             G  SS     P AL W FA+VRSR F+    RFAFVPFLDM NH   P+ ++++ E   +F L A++ IR+G+E+ ISYG+ L  + LMV+YGF +          G+P  ++  +        PG K  +     LE     L  +  L +            D  R EV   + +  +  +     ES    RA  A A L  L A     F+T  E DR  L     +  G  D RL   + YR  RK+   +A + L  +I  L++ ++
Sbjct:   79 LWETLTAREGVESRCRLVESTVGDRTVAATAAALPGE-MLLSIPGRLCIWANRDGTIDRGLDGQSDMTWAVAGDLRADYPDLLRAQGLTWDLRLAVALLEAASEQRCAGGFWDVYGFMLPAPHTVTMPLCFPQELTAEVQNPFMMKAAGQQQVRLESHYPTLVKPNY-HPKLKIYQDL----------GMTSS----VPNALMWCFALVRSRCFSASPERFAFVPFLDMCNHWVKPNADYSYNEATDSFDLVALKPIRSGDEILISYGQGLSNDDLMVRYGFVIE---------GNPHASALMNYKKLVADDPGVKLSDTEVKKLENMQQTLYSLSTLSIET----------DQDRTEVTRLKGVLEVLNVLLTRHESGDLRRA--AEAVLAALTAVAKAEFATRLEDDRRALQEA-RQNPG-TDARLLAALEYRCDRKQQFRIARNALTTFIEILDSQDQ 500          
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: R1CZ63_EMIHU (SET domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZ63_EMIHU)

HSP 1 Score: 200 bits (509), Expect = 4.880e-55
Identity = 162/455 (35.60%), Postives = 214/455 (47.03%), Query Frame = 1
Query:   10 DLLAKNAGVEKKVSLGVVSGGLRGLVADCDVEQGQQVVLEVPSRACLWSNRDGVVSVLYGQSDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFA--GGDGRFAFVPFLDMANHGFAPSTNFTFEDPGAFRLRAMRDIRAGEEVTISYGERLDAEQLMVQYGFPVPPMVLISRPLGDPASRRDRSSTAMPVPGGKEGERTSSTLEGDAYRLDLMDELFMRGQQRFAREAGGDNQRFEVLVRRAIPLIPTIATMLEESSGAGRATKARACLEELQAYRSDNFSTSEEQDRELLAYCVGEGEGKVDQRLADVVRYRVGRKEAHSMAVDILEEYISSLEAS 1368
            DLLA +      V+L     G R LVA  D+   + V L VP R  L ++R G +  L GQ+DL W+AAGDLR+ V +  F RG TWDVRLALA+LEAT+    GG+LW  Y R LP PH ++ P CLP  LL +L    +A  A  + E L  LY   M    +HP TA Y A         RGG A+    + P  L+WA+A+V SR FA  GGD  F FVPFLDM  H   PS NFT ++ G   LR +R + AGEEVTISYG    + +   QYGF      ++S      A+  + +  A             +   G     D+M            R+A       E   R A  L             A       A L  L+A RS     ++  + E     + E  G  D RL  V+ YRV R+   ++A  +LE+ + +   S
Sbjct:   56 DLLAAHGLATDSVALRSDGPGGRTLVAARDLGSNE-VALAVPRRLLLTAHRSGAIGGLAGQTDLVWDAAGDLREEVGEAMFKRGATWDVRLALAVLEATAG--CGGELWDAYRRFLPLPHELSSPVCLPAELLAELREPAVASAAAARNELLADLYAPLM-AHEAHPATAGYVA---------RGGEAAR--GLVPAPLSWAYALVSSRCFALSGGD-TFGFVPFLDMCQHSAVPSANFTSDERGIV-LRTLRPVAAGEEVTISYGGDYSSRRTFEQYGF------VLSEGCAADATLLEEAVAA-------------AAAAGSLSPADVM------------RDASAAEPPTEAAFRAACVLF------------ASDXXXXXATL--LRAVRSALAQQADGAEAEAALDQLAEEAGAADSRLWSVLSYRVSRRRQLALAEAVLEQLVPAQPGS 448          
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: A0A7S0NTJ5_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NTJ5_9EUKA)

HSP 1 Score: 180 bits (457), Expect = 1.460e-47
Identity = 121/287 (42.16%), Postives = 161/287 (56.10%), Query Frame = 1
Query:    4 VFDLLAKNA-GVEKKVSLGVVSGGL----RGLVADCDVEQGQQVVLEVPSRACLWSNRDGVVSVLYGQSDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFAGGD-GRFAFVPFLDMANHGFAPSTNFTFEDPGAFRLRAMRDIRAGEEVTISY-GERLDAEQLMVQYGF 843
            +FD+L + A G   +V+L    GG     RGL +  D++ G+++ L VPS  CL ++R GV+  L GQ+D   +AAGDLRD V +E F +G TWDVRLALA+ EAT+    GG  W  Y RLLP P   T    LP  LL +L +  + KR   +   LR LYP  + T   HP T+ YAA     +             + P+ L W +++V SR FA  D   FAFVPFLDM  H  +PS NFT  D G F L  +R ++AGE VTISY G+  D+ ++   YGF
Sbjct:   12 LFDMLLRQAEGRPPRVTL---QGGRGESGRGLFSTADLDAGEEI-LRVPSELCLTAHRSGVIGGLIGQTDAMVDAAGDLRDEVGEEAFNQGATWDVRLALAVFEATAG--CGGPFWDEYRRLLPLPPFATAAASLPPVLLEELQDPVLQKRGLAKDALLRELYPS-LATHSVHPVTSSYAAMDAPLE-------------LVPLPLQWTYSLVVSRCFAMADEDTFAFVPFLDMCQHSASPSANFTSSD-GDFVLSTLRRMQAGEAVTISYDGDAYDSRRMFELYGF 277          
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: A0A0M0JQY2_9EUKA (Ribulose-bisphosphate carboxylase oxygenase large subunit n-chloroplast n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQY2_9EUKA)

HSP 1 Score: 175 bits (444), Expect = 2.160e-45
Identity = 109/261 (41.76%), Postives = 149/261 (57.09%), Query Frame = 1
Query:   64 SGGLRGLVADCDVEQGQQVVLEVPSRACLWSNRDGVVSVLYGQSDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFAGGDG-RFAFVPFLDMANHGFAPSTNFTFEDPGAFRLRAMRDIRAGEEVTISYGERLDAEQLMVQYGF 843
            SGG R LV    V +G  +VL VP+   L ++R G +  L GQ+++ WEAAGDLR+ V +E F RG TWDVRLALA+ EAT+     G  W  Y +L+P P ++T P CLP+ +L +L N  +  + + +    + L+P  +    +HP TA Y          +RG P     +  P  L +A+A+V SR FA  DG  FAFVPFLDMA H   P+ NF  +      L A+ D++ GEEVTI+Y     +EQL  QYGF
Sbjct:   71 SGGRR-LVTRRAVSKGD-IVLSVPASLLLTAHRSGRIGGLQGQTEVMWEAAGDLREEVGEELFQRGATWDVRLALAVYEATAGG--AGGFWDDYRKLMPPPPSMTHPLCLPQAMLPELQNVELQAKVQAKRALFQDLHPS-LHAHATHPVTASYT---------NRGFPM----EYIPRPLPYAYALVVSRCFAMADGDTFAFVPFLDMAQHADVPTANFRVDAQDGATLTALADLKPGEEVTINYDPDYSSEQLFAQYGF 313          
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: A0A7S4F9T8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9T8_CHRCT)

HSP 1 Score: 168 bits (425), Expect = 2.360e-43
Identity = 115/274 (41.97%), Postives = 151/274 (55.11%), Query Frame = 1
Query:   28 AGVEKKVSLGVVSGGLRGLVADCDVEQGQQVVLEVPSRACLWSNRDGVVSVLYGQSDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFAGGD-GRFAFVPFLDMANHGFAPSTNFTFEDPGAFRLRAMRDIRAGEEVTISY-GERLDAEQLMVQYGF 843
            +G E  V  G      RGL A    EQG+ V++ VP    L ++R GVVS L GQ+D+  +AAGDLR  V ++ F RG TWDVRLALA+ EAT+    GG  W  Y +LLP P        LPE L+ +L +  + +RA+++   L SLYP   +   +HP TA+Y            G P     ++ P  LAW  +MV SR F+  D   FAFVPFLDM  H  AP+ NF+    G F L A+R I AGEE+TISY G    + ++   YGF
Sbjct:  114 SGSESVVLRGGRGDDSRGLFAGKSFEQGE-VLVRVPRDLLLTAHRSGVVSGLIGQTDVMLDAAGDLRSEVGEKMFERGATWDVRLALAVFEATAG--CGGPFWDRYRQLLPLPPFSMSAASLPEFLIDELQDPVLEQRAKQKASMLVSLYPALSQHA-AHPATAMYIRM---------GAPL----EMIPSPLAWCHSMVVSRCFSMADVDTFAFVPFLDMCQHAEAPTANFSSVS-GDFELTALRPIEAGEEITISYDGNEYASRRMFELYGF 369          
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: A0A7S0PZL2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZL2_9EUKA)

HSP 1 Score: 162 bits (410), Expect = 5.140e-42
Identity = 103/258 (39.92%), Postives = 138/258 (53.49%), Query Frame = 1
Query:   76 RGLVADCDVEQGQQVVLEVPSRACLWSNRDGVVSVLYGQSDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFAGGDG-RFAFVPFLDMANHGFAPSTNFTFEDPGAFRLRAMRDIRAGEEVTISY-GERLDAEQLMVQYGF 843
            RGL     +  GQ+++  VP   CL ++R GVV+ L GQ++   EAAGDLR  V +E F RG TWD+RLAL + EAT+    GG  W  Y RLLP P   T    +P  LL +L +  +  RA  +   LR LYP      + HP TA Y       +             + P+ L WA+++V SR F   DG  FA VPFLDM  H   P+ NF+    G F L A+R +++G+EVTISY G   D+ ++   YGF
Sbjct:   72 RGLFTAVAIASGQEII-RVPPDICLTAHRSGVVNGLVGQTEAMDEAAGDLRLEVGEEAFRRGATWDIRLALGVFEATAG--CGGPFWDQYRRLLPLPPLCTSAASVPIALLAELQDPVLQSRAGAKAALLRELYPSLSDHAV-HPVTASYVQMDAPLE-------------LVPLPLQWAYSLVVSRCFTMADGDTFACVPFLDMCQHADLPAANFSSLPDGGFVLTALRPLKSGDEVTISYDGGAYDSRRMFELYGF 312          
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: A0A7S2MSJ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSJ8_9STRA)

HSP 1 Score: 154 bits (388), Expect = 8.500e-38
Identity = 115/266 (43.23%), Postives = 144/266 (54.14%), Query Frame = 1
Query:   76 RGLVADCDVEQGQQVVLEVPSRACLWSNRDGVVSVLYGQSDLCWEAAGDLRDPVSDEDFARGMTWDVRLALALLEATSDPQIG--GQLWPVYGRLLPQPHTIT-VPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFAGGDG--RFAFVPFLDMANHGFAPSTNFTFE-DPGA----FRLRAMRDIRAGEEVTISYGERLDAEQLMVQYGF 843
            RGL+A+ D+  G+  VL VP  ACL   R G VS L GQ+DL  E AGDLR+ +  + + R +TWD+RLAL LLEATS   +G  G+LW  Y  LLP  H    +P  LP  LL +L +  + +RA R    L+ + P        HP  A              GGP   +S      L WA A V SR+F  GD    FAFVPF D+ANH   P+TNFT E  P A    F L+A++DI AGEEVTI YG   D  ++   YGF
Sbjct:   63 RGLIANRDLRIGE-TVLAVPIEACLCVQRRGSVSGLQGQTDLTMEVAGDLREELPGDAW-RTITWDIRLALGLLEATSGNNLGTPGELWDGYFHLLPPLHRGPHIPLVLPPALLPELQDLELTRRAERMSALLQDILPECTDPFC-HPAGA-------------NGGPPRMQSSP----LHWALAQVWSRSFTCGDDIDSFAFVPFFDLANHKDIPNTNFTTEIHPEAGVECFVLKALQDIGAGEEVTICYGSH-DPARMFELYGF 307          
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Match: A0A7S1NQL8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NQL8_9EUGL)

HSP 1 Score: 124 bits (312), Expect = 4.010e-29
Identity = 82/203 (40.39%), Postives = 101/203 (49.75%), Query Frame = 1
Query:  247 DFARGMTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLTQLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSRGGPASSESDVAPMALAWAFAMVRSRAFAGGDGRFAFVPFLDMANHGFAPSTNFTFE-DPGAFRLRAMRDIRAGEEVTISYGERLDAEQLMVQYGFPVP 852
            D     TWD+RLA+ LLEA          W  YG L+    T+  P  L  +LL +L +E MA  A +Q +RLR L+P  +          VYA A E                  P  L W +A+VRSR F  G+  FAFVPFLDMANH   P+ +F +      F LRA+R IR  EEVTISYG   D  +L  QYGF  P
Sbjct:    8 DIPADFTWDIRLAIKLLEAIDGRW--SPFWASYGELMQPYLTMANPMLLYPQLLVELQHEDMADAAVQQQQRLRDLFPDMV--------PGVYAPAEEF-----------------PSPLMWTWALVRSRCFTAGEQAFAFVPFLDMANHLEIPNADFEYAPQDSCFYLRAVRQIRQNEEVTISYGAAYDNRRLFAQYGFVEP 183          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig823.65.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNM5_ECTSI1.820e-14258.70SET domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YIR1_9STRA1.090e-8741.12SET domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S4D535_HETAK3.910e-6134.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
R1CZ63_EMIHU4.880e-5535.60SET domain-containing protein n=1 Tax=Emiliania hu... [more]
A0A7S0NTJ5_9EUKA1.460e-4742.16Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A0M0JQY2_9EUKA2.160e-4541.76Ribulose-bisphosphate carboxylase oxygenase large ... [more]
A0A7S4F9T8_CHRCT2.360e-4341.97Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A7S0PZL2_9EUKA5.140e-4239.92Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S2MSJ8_9STRA8.500e-3843.23Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1NQL8_9EUGL4.010e-2940.39Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig823contigA-nodosum_M_contig823:313835..319690 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNM5
PFAMsRubis-subs-bind,SET
Model size1539
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue2.71e-145
EggNOG OGsKOG1337@1|root,KOG1337@2759|Eukaryota
Descriptionpeptidyl-lysine monomethylation
Cds size1116
COG categoryI
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig823.65.2prot_A-nodosum_M_contig823.65.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig823 313997..318415 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870156.5581882-UTR-A-nodosum_M_contig823:313834..3139961680870156.5581882-UTR-A-nodosum_M_contig823:313834..313996Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig823 313835..313996 -
1680870156.635569-UTR-A-nodosum_M_contig823:318415..3184991680870156.635569-UTR-A-nodosum_M_contig823:318415..318499Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig823 318416..318499 -
1680870156.6462998-UTR-A-nodosum_M_contig823:318964..3190271680870156.6462998-UTR-A-nodosum_M_contig823:318964..319027Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig823 318965..319027 -
1680870156.6569588-UTR-A-nodosum_M_contig823:319576..3196901680870156.6569588-UTR-A-nodosum_M_contig823:319576..319690Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig823 319577..319690 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870156.5712903-CDS-A-nodosum_M_contig823:313996..3141411680870156.5712903-CDS-A-nodosum_M_contig823:313996..314141Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 313997..314141 -
1680870156.5818076-CDS-A-nodosum_M_contig823:314590..3147511680870156.5818076-CDS-A-nodosum_M_contig823:314590..314751Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 314591..314751 -
1680870156.5965672-CDS-A-nodosum_M_contig823:315286..3155741680870156.5965672-CDS-A-nodosum_M_contig823:315286..315574Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 315287..315574 -
1680870156.6064122-CDS-A-nodosum_M_contig823:316444..3165461680870156.6064122-CDS-A-nodosum_M_contig823:316444..316546Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 316445..316546 -
1680870156.6159031-CDS-A-nodosum_M_contig823:317484..3177871680870156.6159031-CDS-A-nodosum_M_contig823:317484..317787Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 317485..317787 -
1680870156.626665-CDS-A-nodosum_M_contig823:318298..3184151680870156.626665-CDS-A-nodosum_M_contig823:318298..318415Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 318299..318415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig823.65.2

>prot_A-nodosum_M_contig823.65.2 ID=prot_A-nodosum_M_contig823.65.2|Name=mRNA_A-nodosum_M_contig823.65.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=372bp
MTWDVRLALALLEATSDPQIGGQLWPVYGRLLPQPHTITVPFCLPERLLT
QLHNEGMAKRARRQVERLRSLYPGFMRTLLSHPRTAVYAAATEKWDGDSR
GGPASSESDVAPMALAWAFAMVRSRAFAGGDGRFAFVPFLDMANHGFAPS
TNFTFEDPGAFRLRAMRDIRAGEEVTISYGERLDAEQLMVQYGFPVPPMV
LISRPLGDPASRRDRSSTAMPVPGGKEGERTSSTLEGDAYRLDLMDELFM
RGQQRFAREAGGDNQRFEVLVRRAIPLIPTIATMLEESSGAGRATKARAC
LEELQAYRSDNFSTSEEQDRELLAYCVGEGEGKVDQRLADVVRYRVGRKE
AHSMAVDILEEYISSLEASER*
back to top

mRNA from alignment at A-nodosum_M_contig823:313835..319690-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig823.65.2 ID=mRNA_A-nodosum_M_contig823.65.2|Name=mRNA_A-nodosum_M_contig823.65.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5856bp|location=Sequence derived from alignment at A-nodosum_M_contig823:313835..319690- (Ascophyllum nodosum dioecious)
GATGTTTTCGACTTGCTGGCTAAGAACGCTGGAGTTGAGAAGAAAGTTTC GCTTGGTGTCGTCAGCGGGGGACTCAGGGGCCTTGTTGCAGACTGCGATG TCGAACAGGGGCAGGTGCCACGCGCTCAGTTATCCATGGATATTGACCTT ATTAACTCATCATACAGCAGTACGTACAGAGCCATTAATAGTGTATAATG TGTGCAGCTCCAAAAGCTCTAGATATCCTTTGCAGCAGACACGTCGCTTG CCACGCGTGTAATTCGCAGGCTGAAAAAGATCTGAGCTACCGCAACGCAA TGCTCAAATAGATCTTCCGTAACCGCTCCGCCACTTCCAAGTGCAGGGCT GGTTGCGATTTTTTCTTTACCTGCTCGAGAGCGACGTTGCGTCAGCAGCA ACAAACAGTCCCGATCCCCGATCGGGGTGGCGTTCACTTTTTCTTTGTTC TATTGCCTATAGAGGAGCCGGAGCAGGGCTGTAACTGCTTGCCATCGCAT CAGTAATGAACACCGAATTACAGAGTGTGCTGCCGGGTGGGTGGCACGAA ACCTTCCTGGAAACACTCGTATTCACTCCCGCAGTCCGGCTACATGCCGT CTACCGCTCGACCGTCGCCTTCTCCTCCCTCTTTCCCTCTGCCTCTCTAC CCCTCTGTCCCAGCAGGTCGTGTTGGAGGTGCCCTCCCGTGCGTGCCTGT GGTCAAACAGAGATGGCGTCGTGAGCGTGAGTTGACCCCCCGGTAGACCG TTGCCGCCTTTCCCTCGTGGTAGTCGTTGACCAACAACGCCCGCCGTTTG GGCCGTTCCCGACAGCTCCACGACCTCACCCGTACATTCCGCACTCGGAA CGTTTGGTTTTCGGGGGGTAACTAGCTATACAGTACAAGATCATGAATAA GATTAGACGAAAAAAGGTACAAAATCGAGATACCACCCGGGCAGGGTGCG GAGAACAATGAAGTAGCGAGCCGAAAAAGGTACGCGGGAAGATCGTTCAT CTCTGATTCATCGCCTCCGTCTCCGGGCTGCCCTGCAGTGCCCTGAGCAA AATCCATGAGGATGGCCGGTGGACGTCTTCTACCTGTGCTCTAGCGATGA ACATCTCTATACTGATGAAACCGGGACGACTTCCCTCTGGCGCTTTCACT CTCGGCACCGCCGATGCCCCCGCGGCGACTCCAATCGACAGGTACTCTAC GGTCAGAGCGACCTATGCTGGGAAGCTGCCGGCGACCTGCGGGACCCCGT CTCGGACGAAGACTTCGCCCGAGGAATGACATGGGACGTCCGCCTCGCGT TGGCTCTGCTGGAGGCCACGTCGGACCCTCAGATCGGCGGACAGCTGTGG CCCGTTTACGGCCGCCTACTGCCTCAACCTCATACCATCACGGTGACTTG CGAAGCATTGGCCCCACAGCAAGACATTATCAATAGAGGTAGAGATGCAA TATCCTACAGGAAGAAGTTACCCTGTATCTGTGTCTTTGAAGCCGGTCTG GCTCGACACGTTGAATCACTGACTGTATTAATAGTTATTTCTTGAAGTAT CAGTTTCACTCCCTTCCCACCTACCTGCGTGTTGAGGCCTTATCAATTAT CACATTATCACATACGGTAATTGAAAAAAAAGTTTGAACATCACAATGAA GAGCGTAGTCTACCATTACCACGTAGATTCGCCGTGTTACCGACTCGCCC TCTCGCGGACGACGTTCCTTCTCCAACGCTCACAGTCGTAGGCAAATGCG AAGGGGCGCCTTTCGTCTGATCCCTTCTTTCCCCTCTTCGCTGTTTGTGC ACCTACAGTAGCACCCCCCCCCCCCCCCCCCCGCACGCTGCACGCTGCAC GCCGCACCCACCTCCCGCTGTCCGTTGTTGATTTCACTTGCGCACCACCG AAGGTTCCATTTTGTCTGCCCGAGCGTCTGCTGACCCAGCTGCACAACGA GGGGATGGCCAAGCGGGCCCGGAGACAGGTCGAGCGCCTGCGCTCCCTCT ACCCAGGGTTTATGCGCACGCTTCTCTCTCATCCCAGAACAGCCGTTTAC GCCGCCGCCACAGAGAAATGGGACGGTGACAGTCGTGGCGGGCCTGCATC GTCCGAGAGCGACGTGGCGCCGATGGCGCTGGCGTGGGCCTTCGCCATGG TGCGAAGCAGGGCCTTCGCTGGAGGTGACGGACGCTTCGCCTTCGTCCCA TTTCTCGTGAGTTTTTTGGAGGGGGGGAGGCGTTCGAAAGGGCTTTAGCG GGGCGGCGAACAGGGCTGAGCTTTCTTCTCGCTTGTTGTGTCGGGTGTTT TTTTTTTTTTGTATCTCACTTACGGCTGATGGGCCTCAACGTGCAAGGTT ACCAATCCCACCTACTGCAACTCTGCCACCCTGCCTGTAATCACGAAGAA TCTTCCCATCTCTCCCCCGTTCTCGCCGTATGAATTTTCATCGCGATGCA AGTTCAGCACTCTTACAACTAGTCAACCAATGGTTGAACTTTACTTACTC ACTATTAGTATTAGTATTAGTTCTCACGCTTTTCGCCACGGAAGCCAGAA AAAATTTTGTGGTTTTCACAAGAATCGAACCCACGACGTCCGTGTACGTG GTTATCTACTAGACCACTCGGGCGCCATGTCCTGATAAGTATTGCTTGAT ATCCCTGTCTGGTCGTCGTGGTCGTTGAACGAAATCGATAGACTTGGAGT TGTTCGTTGCCCTTGTGTTCGTTCATCTTTCTCGATCTCCCTCGACCAGC CCGGTGCGCCGCTGTACTCTTGAGATGAAGTGGTAACTGATTGATAGAGA GGCGTTCTGAGGTTTGATGATGCCCCTCGAATGCTATGTGAGCGATGTTA AGCGAAGCGAAGCAGGTTCTTCGCAGGGCGGGTCGAGAGCGGTGCCGTCA GGGCTGTACACGGAGTACCTTGGTCGGGTAGACAGCTGCCCAGCGTTTCT CCCCTTTCATCTCTAAAACCACGTTTATTTATGTGCTTCGATGGCCACGA CCACCGCGGAGTCAGCTGGGGAGGTGCAACTTGCAATAGACTACACGTGG AAAGTCACGTTTTTTGCCCCACTCCCTCTTCGGAGCTATTGCTATTGTTA CTGTTACTGTTACTTAGCTGACGTCGGAATTTACCCTCCGACAGGACATG GCGAACCACGGCTTCGCGCCAAGCACGAACTTCACGTTCGAAGACCCTGG GGCTTTTCGCCTCCGAGCGATGAGGGATATCAGGGCAGGAGAAGAGGTAA GATCAACCGAAACAATATATTACAGAGGTAGAGGAACATTTTACGTTCCT GCTGTGCACATTTGAAAAATGAAAAGAAGTACAAAAATATGGGATTAATC TGATGAATTTCCTAGCCCTTACGGCAGGTCTGCATCGGCGGGCCCCATTG AGTTTTTTGCTCGAAATAAGGGGTACTTGATCGTCGTTTTGTCAAGAGAC GCCATGCGCTCTGAACCACGCCTTGACCGGTGCCTGAATTTTCCGTTCTT TTCGTTCCAAGAAGTGCGTGCTCCGGTGACATGCGAAACAGCTGTAGTAT ACCGTACGCAAGTAAAAGAACTGCGGTCTCCTGAAGAAATGCTTCAAGAT GGAAAGGAAAGCAGGGTCCACGACTAGTGGTAGTGCACCACGCTGGGACG TGACGTCGACTCAGACCGCTTGCTTGACCACTACCTTCCGCTTCCACTGA AACCAGCCCGCAGACTGCCTTCCATGAAACGCAGCTAAAATTGGAGTGCA TGACCATTGCATAGAGTCGTGTCGCGTCGAGTTGTGAGGAGAAGAGCGTG CTGTTGATCCTTCATCGTATTTAATAGTAATAGTGTGTTAGAAAGGGGCG TGCTAGAGATCCGCCCAGCATGTGCATAATGAAGCCGCGTATTTTGGTAC TAACGGCGATGGGGGGGGGAGGGGGGGGTGTGAACCCCTCACGTCATCCG CTCGGCAGAAGTCGGAGCCGCAGGGTTTCGTGATTCCAGTGACATTATAT TTTCGGCATAGTGCTCTGGTTCTTTAAGGCATATCATTTTCACTATCCTT CATGTAAGTGAGGGAACTCATTATGCTAGGTGCCCGCGCTGAAATGAGTA ACGCCTTGCCCCGCAGGTGACCATCTCTTACGGTGAAAGACTGGACGCCG AGCAGCTTATGGTGCAGTACGGCTTCCCCGTGCCCCCGATGGTGTTGATA TCGCGCCCTCTCGGTGATCCTGCTTCACGGCGAGACCGCTCCTCGACAGC GATGCCGGTACCAGGTGGAAAAGAAGGCGAGAGGACATCGTCGACGCTGG AGGGTGATGCCTATAGGCTTGACTTGATGGACGAGTTGTTCATGCGCGGG CAACAACGCTTCGCAAGAGAGGCGGGGGGTGATAACCAACGGTTCGAGGT GTTGGTGAGCTCGGTCTGTTTGCGTATATGCGAGCGAGCGTGCGCCCGCT TCGCCCGAGCGCAGGCGGGGCGATGCGTTTGTGGTTCTCTTTACACGTCC TCCGCATGCATCAGCACCACCGGTGGTATCCGTACAAGCAGCGACTTCGT ATTATAGTGGGGCAATACGGGAATCTTGCGGTAGAACAACGCGATTACTC TACATTTTCTCAGCGCAGAAGAGTAGAAGCGATGGCGACGGTGCAGGATA ACGATATTGGGGTCAATTACGCATCAGCCTCTTAGTATGCATATAGCGAG CGGCTCACCTGCGCCTACTCATCCCGCGAAAAGCTCCGTCTCAAGAAGGC TGTTGATAGAGGCATTGTGATCGTTGGGCGACCAAGGCGTAAGAGGGGAC GCGCAACGTGCCTAAGGCAGACCAGCTCCTTGAGCGATCACCATGCTCTT GTCTCTCTACCTCCCCCCCCATCCCCCCGCCTCTATGGCGTTCACCCGTC GCGCCTTACGATTGACATTTCACATCATCGCGCGCGAAGGTGCGGAGGGC CATTCCTCTCATTCCCACCATAGCGACCATGTTGGAGGAATCGAGTGGTG CCGGGAGAGCCACGAAAGCTAGGGCCTGTCTGGAGGAACTGCAGGCTTAC CGATCGGATAATTTCTCTACGTCGGAAGAACAGGATCGGGAGCTCCTGGC GTGAGGATGCATTTGGTGTCGAGATCTGCACACCATCCAAAAGCTAGTTT GAGTTCGCAGATCGAGCTCGCGCCCTCATCCGTATGGCGTCATTTTAGAA AGTAAGCTGGCTGGCCGTCCCAGTAAAACCGCAATACATCTGCGGGGCTT CTACGATTGTAGGAAACACGAGAGTCTGGGGTCCTTCGAACCAATTAGCT GTGTTCGACATTGCAATGAAAAGCGGCATCGCGTCTTGTGTCTAGCCAGC CTTGTCTTGTCCGCCAGGAGTGGCTCGTAATAAGTAGAATCGGGGAATCG GCTTCCTTCAAGCATCGCTGGTTTGACTCAGGCAAACGTCTCGCTTTTCT CTAGAGAAAACAAGCATTACCCACTCCAATTACCACCCCGTCTTGTTCTC CCTACCCTGCTGCCTCAGATGCACTCCTTCCCTACGTTGTTTGTGGCAGG TATTGCGTGGGCGAGGGAGAGGGTAAAGTCGACCAGCGACTAGCCGACGT CGTGCGCTACCGTGTCGGGAGGAAAGAAGCCCACTCCATGGCTGTTGACA TTCTGGAAGAGTATATCTCGTCACTGGAAGCTTCTGAGCGCTAGATAGGG CTGGCTATAGAGTAGAAAGGCTGACGCCGAGGGAACATCGTTAGTGTCGG CCTTGTTCCAACCTGCGGAACAGGCCGTAGATATCTGGTACACGAGCCTG CAAAATAGATTTGACCATCACCCCAGATTCGATTCTACAAGGCGGGGCTA GCCTTC
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig823:313835..319690-

>mRNA_A-nodosum_M_contig823.65.2 ID=mRNA_A-nodosum_M_contig823.65.2|Name=mRNA_A-nodosum_M_contig823.65.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1116bp|location=Sequence derived from alignment at A-nodosum_M_contig823:313835..319690- (Ascophyllum nodosum dioecious)
ATGACATGGGACGTCCGCCTCGCGTTGGCTCTGCTGGAGGCCACGTCGGA
CCCTCAGATCGGCGGACAGCTGTGGCCCGTTTACGGCCGCCTACTGCCTC
AACCTCATACCATCACGGTTCCATTTTGTCTGCCCGAGCGTCTGCTGACC
CAGCTGCACAACGAGGGGATGGCCAAGCGGGCCCGGAGACAGGTCGAGCG
CCTGCGCTCCCTCTACCCAGGGTTTATGCGCACGCTTCTCTCTCATCCCA
GAACAGCCGTTTACGCCGCCGCCACAGAGAAATGGGACGGTGACAGTCGT
GGCGGGCCTGCATCGTCCGAGAGCGACGTGGCGCCGATGGCGCTGGCGTG
GGCCTTCGCCATGGTGCGAAGCAGGGCCTTCGCTGGAGGTGACGGACGCT
TCGCCTTCGTCCCATTTCTCGACATGGCGAACCACGGCTTCGCGCCAAGC
ACGAACTTCACGTTCGAAGACCCTGGGGCTTTTCGCCTCCGAGCGATGAG
GGATATCAGGGCAGGAGAAGAGGTGACCATCTCTTACGGTGAAAGACTGG
ACGCCGAGCAGCTTATGGTGCAGTACGGCTTCCCCGTGCCCCCGATGGTG
TTGATATCGCGCCCTCTCGGTGATCCTGCTTCACGGCGAGACCGCTCCTC
GACAGCGATGCCGGTACCAGGTGGAAAAGAAGGCGAGAGGACATCGTCGA
CGCTGGAGGGTGATGCCTATAGGCTTGACTTGATGGACGAGTTGTTCATG
CGCGGGCAACAACGCTTCGCAAGAGAGGCGGGGGGTGATAACCAACGGTT
CGAGGTGTTGGTGCGGAGGGCCATTCCTCTCATTCCCACCATAGCGACCA
TGTTGGAGGAATCGAGTGGTGCCGGGAGAGCCACGAAAGCTAGGGCCTGT
CTGGAGGAACTGCAGGCTTACCGATCGGATAATTTCTCTACGTCGGAAGA
ACAGGATCGGGAGCTCCTGGCGTATTGCGTGGGCGAGGGAGAGGGTAAAG
TCGACCAGCGACTAGCCGACGTCGTGCGCTACCGTGTCGGGAGGAAAGAA
GCCCACTCCATGGCTGTTGACATTCTGGAAGAGTATATCTCGTCACTGGA
AGCTTCTGAGCGCTAG
back to top